ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf53f07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT832447.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA029A18, full insert sequence Length = 1196 Score = 575 bits (290), Expect = e-160 Identities = 575/670 (85%) Strand = Plus / Plus Query: 3 tgcgaaatggacccagctgctgccatggctactaatgtgccttcttcgcttgtcgattgg 62 ||||||| ||| || |||||||| |||||||||||||| ||||| || |||||| |||| Sbjct: 274 tgcgaaacggatcctgctgctgctatggctactaatgtaccttcatcacttgtcacttgg 333 Query: 63 tcactgagcttcgggaatgacaagacccttttgattcatctctccacagatcaagtttat 122 | | ||||| ||||||||||| || ||| | || |||||||| |||||||||||||| Sbjct: 334 ttgttaagctttgggaatgacaacactcttcttatccatctctcaacagatcaagtttac 393 Query: 123 gaaggggtgaaatccttctacaaagagggggatgagacactgccagtgaacatgtatggc 182 || || || ||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 394 gagggagtaaaatccttctacaaagaggatgatgagaccttgccagtgaacatgtatgga 453 Query: 183 aaatcaaaagttgctgcagagaagttcgttactgataaatgctcaaactatgcgatcttg 242 ||||| |||||||||||||||||||| ||| ||| |||||||||||||||| |||||| Sbjct: 454 aaatctaaagttgctgcagagaagtttattattgaacaatgctcaaactatgcaatcttg 513 Query: 243 agaagcagcattatttatgggccacaaactgtctctcctgtggagaagtctctccctatt 302 |||||||| |||||||||||||||||||| | |||||||||| || ||||| || ||| Sbjct: 514 agaagcagtattatttatgggccacaaacaatttctcctgtggcaaaatctcttccaatt 573 Query: 303 cagtggatggataatgttctctcacaaggccaacaagttgatttctttaatgatgagtac 362 ||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||| | Sbjct: 574 cagtggatggatagtgttctttcacaaggccaacaagttcaattctttaatgatgagttc 633 Query: 363 cgctgcccggtttatgtaaaagatatagtggatgtaatattgtctttaacaaaaagttgg 422 || || || ||||||||||||||||| ||||||||| | |||||||| |||||| ||| Sbjct: 634 cggtgtcctgtttatgtaaaagatatggtggatgtagtgttgtctttgacaaaatcatgg 693 Query: 423 ttatcagatggcaaaaagattcgggtacttctgaatgtaggcggagcagatagggtttcg 482 ||| ||||||| ||| ||| ||||| |||||||| || ||| ||||||| || || Sbjct: 694 ttagcagatggtaaagctgttcaagtactcctgaatgtcggtggaccagatagagtctca 753 Query: 483 agactgcagatggctgagtctgttgctgaagttcgtggatatagcaagtcgataatcaaa 542 ||||||||||||||||| ||||||||||| |||||||||||||| | || ||||||||| Sbjct: 754 agactgcagatggctgaatctgttgctgatgttcgtggatatagtcattctataatcaaa 813 Query: 543 tctgtgcctgcatcatcggttaaccggggtgtagcttctccgccagacatatccatggat 602 ||||| |||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 814 tctgtatctgcttcatcggttgaccggggtgtagcttctccaccagacatatccatggat 873 Query: 603 atcaccaagctaactcagacgctcggtatcaagccgattacatttctggatggagtcaga 662 |||||||| ||||| || | ||| ||||||||||| ||| |||||| |||||||||||| Sbjct: 874 atcaccaaactaacccaaatgcttggtatcaagccaatttcatttcaagatggagtcaga 933 Query: 663 gctacacttg 672 |||||||||| Sbjct: 934 gctacacttg 943
>ref|NM_001055120.1| Oryza sativa (japonica cultivar-group) Os02g0826200 (Os02g0826200) mRNA, complete cds Length = 1193 Score = 567 bits (286), Expect = e-158 Identities = 574/670 (85%) Strand = Plus / Plus Query: 3 tgcgaaatggacccagctgctgccatggctactaatgtgccttcttcgcttgtcgattgg 62 ||||||| ||| || |||||||| |||||||||||||| ||||| || |||||| |||| Sbjct: 275 tgcgaaacggatcctgctgctgctatggctactaatgtaccttcatcacttgtcacttgg 334 Query: 63 tcactgagcttcgggaatgacaagacccttttgattcatctctccacagatcaagtttat 122 | | ||||| ||||||||||| || ||| | || |||||||| |||||||||||||| Sbjct: 335 ttgttaagctttgggaatgacaacactcttcttatccatctctcaacagatcaagtttac 394 Query: 123 gaaggggtgaaatccttctacaaagagggggatgagacactgccagtgaacatgtatggc 182 || || || ||||||||||||||||||| |||||||| |||||||||||||||| || Sbjct: 395 gagggagtaaaatccttctacaaagaggatgatgagaccttgccagtgaacatgtacgga 454 Query: 183 aaatcaaaagttgctgcagagaagttcgttactgataaatgctcaaactatgcgatcttg 242 ||||| |||||||||||||||||||| ||| ||| |||||||||||||||| |||||| Sbjct: 455 aaatctaaagttgctgcagagaagtttattattgaacaatgctcaaactatgcaatcttg 514 Query: 243 agaagcagcattatttatgggccacaaactgtctctcctgtggagaagtctctccctatt 302 |||||||| |||||||||||||||||||| | |||||||||| || ||||| || ||| Sbjct: 515 agaagcagtattatttatgggccacaaacaatttctcctgtggcaaaatctcttccaatt 574 Query: 303 cagtggatggataatgttctctcacaaggccaacaagttgatttctttaatgatgagtac 362 ||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||| | Sbjct: 575 cagtggatggatagtgttctttcacaaggccaacaagttcaattctttaatgatgagttc 634 Query: 363 cgctgcccggtttatgtaaaagatatagtggatgtaatattgtctttaacaaaaagttgg 422 || || || ||||||||||||||||| ||||||||| | |||||||| |||||| ||| Sbjct: 635 cggtgtcctgtttatgtaaaagatatggtggatgtagtgttgtctttgacaaaatcatgg 694 Query: 423 ttatcagatggcaaaaagattcgggtacttctgaatgtaggcggagcagatagggtttcg 482 ||| ||||||| ||| ||| ||||| |||||||| || ||| ||||||| || || Sbjct: 695 ttagcagatggtaaagctgttcaagtactcctgaatgtcggtggaccagatagagtctca 754 Query: 483 agactgcagatggctgagtctgttgctgaagttcgtggatatagcaagtcgataatcaaa 542 ||||||||||||||||| ||||||||||| |||||||||||||| | || ||||||||| Sbjct: 755 agactgcagatggctgaatctgttgctgatgttcgtggatatagtcattctataatcaaa 814 Query: 543 tctgtgcctgcatcatcggttaaccggggtgtagcttctccgccagacatatccatggat 602 ||||| |||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 815 tctgtatctgcttcatcggttgaccggggtgtagcttctccaccagacatatccatggat 874 Query: 603 atcaccaagctaactcagacgctcggtatcaagccgattacatttctggatggagtcaga 662 |||||||| ||||| || | ||| ||||||||||| ||| |||||| |||||||||||| Sbjct: 875 atcaccaaactaacccaaatgcttggtatcaagccaatttcatttcaagatggagtcaga 934 Query: 663 gctacacttg 672 |||||||||| Sbjct: 935 gctacacttg 944
>dbj|AK070787.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067C07, full insert sequence Length = 1194 Score = 567 bits (286), Expect = e-158 Identities = 574/670 (85%) Strand = Plus / Plus Query: 3 tgcgaaatggacccagctgctgccatggctactaatgtgccttcttcgcttgtcgattgg 62 ||||||| ||| || |||||||| |||||||||||||| ||||| || |||||| |||| Sbjct: 276 tgcgaaacggatcctgctgctgctatggctactaatgtaccttcatcacttgtcacttgg 335 Query: 63 tcactgagcttcgggaatgacaagacccttttgattcatctctccacagatcaagtttat 122 | | ||||| ||||||||||| || ||| | || |||||||| |||||||||||||| Sbjct: 336 ttgttaagctttgggaatgacaacactcttcttatccatctctcaacagatcaagtttac 395 Query: 123 gaaggggtgaaatccttctacaaagagggggatgagacactgccagtgaacatgtatggc 182 || || || ||||||||||||||||||| |||||||| |||||||||||||||| || Sbjct: 396 gagggagtaaaatccttctacaaagaggatgatgagaccttgccagtgaacatgtacgga 455 Query: 183 aaatcaaaagttgctgcagagaagttcgttactgataaatgctcaaactatgcgatcttg 242 ||||| |||||||||||||||||||| ||| ||| |||||||||||||||| |||||| Sbjct: 456 aaatctaaagttgctgcagagaagtttattattgaacaatgctcaaactatgcaatcttg 515 Query: 243 agaagcagcattatttatgggccacaaactgtctctcctgtggagaagtctctccctatt 302 |||||||| |||||||||||||||||||| | |||||||||| || ||||| || ||| Sbjct: 516 agaagcagtattatttatgggccacaaacaatttctcctgtggcaaaatctcttccaatt 575 Query: 303 cagtggatggataatgttctctcacaaggccaacaagttgatttctttaatgatgagtac 362 ||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||| | Sbjct: 576 cagtggatggatagtgttctttcacaaggccaacaagttcaattctttaatgatgagttc 635 Query: 363 cgctgcccggtttatgtaaaagatatagtggatgtaatattgtctttaacaaaaagttgg 422 || || || ||||||||||||||||| ||||||||| | |||||||| |||||| ||| Sbjct: 636 cggtgtcctgtttatgtaaaagatatggtggatgtagtgttgtctttgacaaaatcatgg 695 Query: 423 ttatcagatggcaaaaagattcgggtacttctgaatgtaggcggagcagatagggtttcg 482 ||| ||||||| ||| ||| ||||| |||||||| || ||| ||||||| || || Sbjct: 696 ttagcagatggtaaagctgttcaagtactcctgaatgtcggtggaccagatagagtctca 755 Query: 483 agactgcagatggctgagtctgttgctgaagttcgtggatatagcaagtcgataatcaaa 542 ||||||||||||||||| ||||||||||| |||||||||||||| | || ||||||||| Sbjct: 756 agactgcagatggctgaatctgttgctgatgttcgtggatatagtcattctataatcaaa 815 Query: 543 tctgtgcctgcatcatcggttaaccggggtgtagcttctccgccagacatatccatggat 602 ||||| |||| ||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct: 816 tctgtatctgcttcatcggttgaccggggtgtagcttctccaccagacatatccatggat 875 Query: 603 atcaccaagctaactcagacgctcggtatcaagccgattacatttctggatggagtcaga 662 |||||||| ||||| || | ||| ||||||||||| ||| |||||| |||||||||||| Sbjct: 876 atcaccaaactaacccaaatgcttggtatcaagccaatttcatttcaagatggagtcaga 935 Query: 663 gctacacttg 672 |||||||||| Sbjct: 936 gctacacttg 945
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 170 bits (86), Expect = 6e-39 Identities = 137/154 (88%) Strand = Plus / Plus Query: 132 aaatccttctacaaagagggggatgagacactgccagtgaacatgtatggcaaatcaaaa 191 ||||||||||||||||||| |||||||| |||||||||||||||| || ||||| ||| Sbjct: 35527831 aaatccttctacaaagaggatgatgagaccttgccagtgaacatgtacggaaaatctaaa 35527890 Query: 192 gttgctgcagagaagttcgttactgataaatgctcaaactatgcgatcttgagaagcagc 251 ||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||| Sbjct: 35527891 gttgctgcagagaagtttattattgaacaatgctcaaactatgcaatcttgagaagcagt 35527950 Query: 252 attatttatgggccacaaactgtctctcctgtgg 285 |||||||||||||||||||| | |||||||||| Sbjct: 35527951 attatttatgggccacaaacaatttctcctgtgg 35527984 Score = 137 bits (69), Expect = 8e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 560 ggttaaccggggtgtagcttctccgccagacatatccatggatatcaccaagctaactca 619 |||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 35529008 ggttgaccggggtgtagcttctccaccagacatatccatggatatcaccaaactaaccca 35529067 Query: 620 gacgctcggtatcaagccgattacatttctggatggagtcagagctacacttg 672 | ||| ||||||||||| ||| |||||| |||||||||||||||||||||| Sbjct: 35529068 aatgcttggtatcaagccaatttcatttcaagatggagtcagagctacacttg 35529120 Score = 131 bits (66), Expect = 5e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 303 cagtggatggataatgttctctcacaaggccaacaagttgatttctttaatgatgagtac 362 ||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||| | Sbjct: 35528150 cagtggatggatagtgttctttcacaaggccaacaagttcaattctttaatgatgagttc 35528209 Query: 363 cgctgcccggtttatgtaaaagatatagtggatgtaatattgtctttaacaaaa 416 || || || ||||||||||||||||| ||||||||| | |||||||| |||||| Sbjct: 35528210 cggtgtcctgtttatgtaaaagatatggtggatgtagtgttgtctttgacaaaa 35528263 Score = 103 bits (52), Expect = 1e-18 Identities = 100/116 (86%) Strand = Plus / Plus Query: 447 gtacttctgaatgtaggcggagcagatagggtttcgagactgcagatggctgagtctgtt 506 ||||| |||||||| || ||| ||||||| || || ||||||||||||||||| |||||| Sbjct: 35528440 gtactcctgaatgtcggtggaccagatagagtctcaagactgcagatggctgaatctgtt 35528499 Query: 507 gctgaagttcgtggatatagcaagtcgataatcaaatctgtgcctgcatcatcggt 562 ||||| |||||||||||||| | || |||||||||||||| |||| |||||||| Sbjct: 35528500 gctgatgttcgtggatatagtcattctataatcaaatctgtatctgcttcatcggt 35528555 Score = 69.9 bits (35), Expect = 2e-08 Identities = 95/115 (82%) Strand = Plus / Plus Query: 3 tgcgaaatggacccagctgctgccatggctactaatgtgccttcttcgcttgtcgattgg 62 ||||||| ||| || |||||||| |||||||||||||| ||||| || |||||| |||| Sbjct: 35527472 tgcgaaacggatcctgctgctgctatggctactaatgtaccttcatcacttgtcacttgg 35527531 Query: 63 tcactgagcttcgggaatgacaagacccttttgattcatctctccacagatcaag 117 | | ||||| ||||||||||| || ||| | || |||||||| |||||||||| Sbjct: 35527532 ttgttaagctttgggaatgacaacactcttcttatccatctctcaacagatcaag 35527586
>dbj|AP004776.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0452F04 Length = 171421 Score = 170 bits (86), Expect = 6e-39 Identities = 137/154 (88%) Strand = Plus / Plus Query: 132 aaatccttctacaaagagggggatgagacactgccagtgaacatgtatggcaaatcaaaa 191 ||||||||||||||||||| |||||||| |||||||||||||||| || ||||| ||| Sbjct: 44223 aaatccttctacaaagaggatgatgagaccttgccagtgaacatgtacggaaaatctaaa 44282 Query: 192 gttgctgcagagaagttcgttactgataaatgctcaaactatgcgatcttgagaagcagc 251 ||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||| Sbjct: 44283 gttgctgcagagaagtttattattgaacaatgctcaaactatgcaatcttgagaagcagt 44342 Query: 252 attatttatgggccacaaactgtctctcctgtgg 285 |||||||||||||||||||| | |||||||||| Sbjct: 44343 attatttatgggccacaaacaatttctcctgtgg 44376 Score = 137 bits (69), Expect = 8e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 560 ggttaaccggggtgtagcttctccgccagacatatccatggatatcaccaagctaactca 619 |||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 45400 ggttgaccggggtgtagcttctccaccagacatatccatggatatcaccaaactaaccca 45459 Query: 620 gacgctcggtatcaagccgattacatttctggatggagtcagagctacacttg 672 | ||| ||||||||||| ||| |||||| |||||||||||||||||||||| Sbjct: 45460 aatgcttggtatcaagccaatttcatttcaagatggagtcagagctacacttg 45512 Score = 131 bits (66), Expect = 5e-27 Identities = 102/114 (89%) Strand = Plus / Plus Query: 303 cagtggatggataatgttctctcacaaggccaacaagttgatttctttaatgatgagtac 362 ||||||||||||| |||||| |||||||||||||||||| | |||||||||||||||| | Sbjct: 44542 cagtggatggatagtgttctttcacaaggccaacaagttcaattctttaatgatgagttc 44601 Query: 363 cgctgcccggtttatgtaaaagatatagtggatgtaatattgtctttaacaaaa 416 || || || ||||||||||||||||| ||||||||| | |||||||| |||||| Sbjct: 44602 cggtgtcctgtttatgtaaaagatatggtggatgtagtgttgtctttgacaaaa 44655 Score = 103 bits (52), Expect = 1e-18 Identities = 100/116 (86%) Strand = Plus / Plus Query: 447 gtacttctgaatgtaggcggagcagatagggtttcgagactgcagatggctgagtctgtt 506 ||||| |||||||| || ||| ||||||| || || ||||||||||||||||| |||||| Sbjct: 44832 gtactcctgaatgtcggtggaccagatagagtctcaagactgcagatggctgaatctgtt 44891 Query: 507 gctgaagttcgtggatatagcaagtcgataatcaaatctgtgcctgcatcatcggt 562 ||||| |||||||||||||| | || |||||||||||||| |||| |||||||| Sbjct: 44892 gctgatgttcgtggatatagtcattctataatcaaatctgtatctgcttcatcggt 44947 Score = 69.9 bits (35), Expect = 2e-08 Identities = 95/115 (82%) Strand = Plus / Plus Query: 3 tgcgaaatggacccagctgctgccatggctactaatgtgccttcttcgcttgtcgattgg 62 ||||||| ||| || |||||||| |||||||||||||| ||||| || |||||| |||| Sbjct: 43864 tgcgaaacggatcctgctgctgctatggctactaatgtaccttcatcacttgtcacttgg 43923 Query: 63 tcactgagcttcgggaatgacaagacccttttgattcatctctccacagatcaag 117 | | ||||| ||||||||||| || ||| | || |||||||| |||||||||| Sbjct: 43924 ttgttaagctttgggaatgacaacactcttcttatccatctctcaacagatcaag 43978
>gb|AY112190.1| Zea mays CL9363_1 mRNA sequence Length = 569 Score = 159 bits (80), Expect = 2e-35 Identities = 188/224 (83%) Strand = Plus / Minus Query: 469 cagatagggtttcgagactgcagatggctgagtctgttgctgaagttcgtggatatagca 528 |||||||||| || |||||||| ||||||||||||||||||| || |||||||||| | Sbjct: 514 cagatagggtatcaagactgcaaatggctgagtctgttgctgttgtccgtggatataacc 455 Query: 529 agtcgataatcaaatctgtgcctgcatcatcggttaaccggggtgtagcttctccgccag 588 ||||||||||||||| ||||||||||||||| || || ||||||||||| |||| Sbjct: 454 ccagtataatcaaatctgtgtttgcatcatcggttaatcgcggagtagcttctccaccag 395 Query: 589 acatatccatggatatcaccaagctaactcagacgctcggtatcaagccgattacatttc 648 ||||||||||||| |||||||||||||| |||| || ||||||||||| || |||||| Sbjct: 394 acatatccatggacatcaccaagctaacccagatccttggtatcaagccaatatcatttc 335 Query: 649 tggatggagtcagagctacacttgacacggaagccagtacatga 692 ||||||||||| ||||||||| | |||| |||||||||| Sbjct: 334 aaaatggagtcagaagtacacttgatgcagaagacagtacatga 291
>dbj|AK228352.1| Arabidopsis thaliana mRNA for putative dTDP-6-deoxy-L-mannose-dehydrogenase, complete cds, clone: RAFL14-77-C13 Length = 1154 Score = 61.9 bits (31), Expect = 4e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 93 ttgattcatctctccacagatcaagtttatgaaggggtgaaatccttctacaaagagggg 152 |||||||||||||| || |||||||||||| |||| || || || |||||||| || | Sbjct: 410 ttgattcatctctctactgatcaagtttatcaaggtgtcaagtctttctacaaggaagaa 469 Query: 153 gatgagacactgccagtgaacatgtatggcaaatcaaaagttgctgcagag 203 |||||||| | |||| ||| | ||||| |||||||||||||| |||||| Sbjct: 470 gatgagactgttgcagtcaacgtttatgggaaatcaaaagttgcagcagag 520
>ref|NM_116280.2| Arabidopsis thaliana unknown protein (AT4G00560) mRNA, complete cds Length = 1218 Score = 61.9 bits (31), Expect = 4e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 93 ttgattcatctctccacagatcaagtttatgaaggggtgaaatccttctacaaagagggg 152 |||||||||||||| || |||||||||||| |||| || || || |||||||| || | Sbjct: 485 ttgattcatctctctactgatcaagtttatcaaggtgtcaagtctttctacaaggaagaa 544 Query: 153 gatgagacactgccagtgaacatgtatggcaaatcaaaagttgctgcagag 203 |||||||| | |||| ||| | ||||| |||||||||||||| |||||| Sbjct: 545 gatgagactgttgcagtcaacgtttatgggaaatcaaaagttgcagcagag 595
>ref|NM_202762.1| Arabidopsis thaliana unknown protein (AT4G00560) mRNA, complete cds Length = 1094 Score = 61.9 bits (31), Expect = 4e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 93 ttgattcatctctccacagatcaagtttatgaaggggtgaaatccttctacaaagagggg 152 |||||||||||||| || |||||||||||| |||| || || || |||||||| || | Sbjct: 485 ttgattcatctctctactgatcaagtttatcaaggtgtcaagtctttctacaaggaagaa 544 Query: 153 gatgagacactgccagtgaacatgtatggcaaatcaaaagttgctgcagag 203 |||||||| | |||| ||| | ||||| |||||||||||||| |||||| Sbjct: 545 gatgagactgttgcagtcaacgtttatgggaaatcaaaagttgcagcagag 595
>ref|NM_202763.1| Arabidopsis thaliana unknown protein (AT4G00560) mRNA, complete cds Length = 1309 Score = 61.9 bits (31), Expect = 4e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 93 ttgattcatctctccacagatcaagtttatgaaggggtgaaatccttctacaaagagggg 152 |||||||||||||| || |||||||||||| |||| || || || |||||||| || | Sbjct: 485 ttgattcatctctctactgatcaagtttatcaaggtgtcaagtctttctacaaggaagaa 544 Query: 153 gatgagacactgccagtgaacatgtatggcaaatcaaaagttgctgcagag 203 |||||||| | |||| ||| | ||||| |||||||||||||| |||||| Sbjct: 545 gatgagactgttgcagtcaacgtttatgggaaatcaaaagttgcagcagag 595
>emb|BX819247.1|CNS0A9XL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1382 Score = 61.9 bits (31), Expect = 4e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 93 ttgattcatctctccacagatcaagtttatgaaggggtgaaatccttctacaaagagggg 152 |||||||||||||| || |||||||||||| |||| || || || |||||||| || | Sbjct: 509 ttgattcatctctctactgatcaagtttatcaaggtgtcaagtctttctacaaggaagaa 568 Query: 153 gatgagacactgccagtgaacatgtatggcaaatcaaaagttgctgcagag 203 |||||||| | |||| ||| | ||||| |||||||||||||| |||||| Sbjct: 569 gatgagactgttgcagtcaacgtttatgggaaatcaaaagttgcagcagag 619
>emb|BX827018.1|CNS0A46K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB87ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 960 Score = 61.9 bits (31), Expect = 4e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 93 ttgattcatctctccacagatcaagtttatgaaggggtgaaatccttctacaaagagggg 152 |||||||||||||| || |||||||||||| |||| || || || |||||||| || | Sbjct: 392 ttgattcatctctctactgatcaagtttatcaaggtgtcaagtctttctacaaggaagaa 451 Query: 153 gatgagacactgccagtgaacatgtatggcaaatcaaaagttgctgcagag 203 |||||||| | |||| ||| | ||||| |||||||||||||| |||||| Sbjct: 452 gatgagactgttgcagtcaacgtttatgggaaatcaaaagttgcagcagag 502
>emb|BX827503.1|CNS0A3PP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS66ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 986 Score = 61.9 bits (31), Expect = 4e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 93 ttgattcatctctccacagatcaagtttatgaaggggtgaaatccttctacaaagagggg 152 |||||||||||||| || |||||||||||| |||| || || || |||||||| || | Sbjct: 399 ttgattcatctctctactgatcaagtttatcaaggtgtcaagtctttctacaaggaagaa 458 Query: 153 gatgagacactgccagtgaacatgtatggcaaatcaaaagttgctgcagag 203 |||||||| | |||| ||| | ||||| |||||||||||||| |||||| Sbjct: 459 gatgagactgttgcagtcaacgtttatgggaaatcaaaagttgcagcagag 509
>emb|AM180088.1| Haloquadratum walsbyi DSM 16790 complete genome Length = 3132494 Score = 50.1 bits (25), Expect = 0.015 Identities = 25/25 (100%) Strand = Plus / Minus Query: 487 tgcagatggctgagtctgttgctga 511 ||||||||||||||||||||||||| Sbjct: 2242224 tgcagatggctgagtctgttgctga 2242200
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 44.1 bits (22), Expect = 0.90 Identities = 22/22 (100%) Strand = Plus / Plus Query: 899 tgaataaaaatggcgtccatgt 920 |||||||||||||||||||||| Sbjct: 8889494 tgaataaaaatggcgtccatgt 8889515
>gb|AC005099.2| Homo sapiens BAC clone CTA-351J1 from 7, complete sequence Length = 131611 Score = 44.1 bits (22), Expect = 0.90 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 ttcagtggatggataatgttct 322 |||||||||||||||||||||| Sbjct: 28716 ttcagtggatggataatgttct 28695
>gb|AC009211.5|AC009211 Drosophila melanogaster, chromosome 3R, region 87D11-87E3, BAC clone BACR48D15, complete sequence Length = 184272 Score = 44.1 bits (22), Expect = 0.90 Identities = 22/22 (100%) Strand = Plus / Plus Query: 899 tgaataaaaatggcgtccatgt 920 |||||||||||||||||||||| Sbjct: 29606 tgaataaaaatggcgtccatgt 29627
>gb|AC147314.4| Pan troglodytes BAC clone RP43-50A6 from chromosome 7, complete sequence Length = 176459 Score = 44.1 bits (22), Expect = 0.90 Identities = 22/22 (100%) Strand = Plus / Minus Query: 301 ttcagtggatggataatgttct 322 |||||||||||||||||||||| Sbjct: 64526 ttcagtggatggataatgttct 64505
>gb|AC158355.2| Mus musculus BAC clone RP24-374N16 from chromosome 9, complete sequence Length = 172612 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 707 ttgttcaagttcctccacaaa 727 ||||||||||||||||||||| Sbjct: 166229 ttgttcaagttcctccacaaa 166209
>gb|AC158440.3| Macropus eugenii clone ME_KBa-330E9, complete sequence Length = 101335 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 gatggagtcagagctacactt 671 ||||||||||||||||||||| Sbjct: 31038 gatggagtcagagctacactt 31058
>emb|CR354554.13| Zebrafish DNA sequence from clone CH211-207B16 in linkage group 12, complete sequence Length = 90544 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 attcatctctccacagatcaa 116 ||||||||||||||||||||| Sbjct: 11354 attcatctctccacagatcaa 11334 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 177,654,398 Number of extensions: 9157832 Number of successful extensions: 175535 Number of sequences better than 10.0: 21 Number of HSP's gapped: 175520 Number of HSP's successfully gapped: 30 Length of query: 942 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 919 Effective length of database: 18,503,978,556 Effective search space: 17005156292964 Effective search space used: 17005156292964 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
