ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf53e17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK061456:Os01g0559000 404 e-113
2AK070797:Os01g0559000 264 9e-71
3AK110198: 57 2e-08
4Os02g0225200:Os02g0225200 31 1.7
5AK065753:Os11g0567800 30 3.7
6AK100331:Os12g0576900 29 4.8
7Os11g0246600:Os11g0246600 29 6.3
8Os03g0346700:Os03g0346700 28 8.3

>AK061456:Os01g0559000 |
          Length = 204
 Score =  404 bits (1038), Expect = e-113
 Identities = 192/204 (94%), Positives = 201/204 (98%)
 Frame = +3

Query: 111 MACLHDHECGDHNCAADWSLYNHIDIPKVVALNESVAGSVKSVFKSWDQRLETSGGFLES 290
           MACLHDH C DHNCAADWSL+NHID+PKVVALNESVAGSVKSVFK W+QRL+TSGGFLES
Sbjct: 1   MACLHDHSCEDHNCAADWSLFNHIDVPKVVALNESVAGSVKSVFKPWEQRLDTSGGFLES 60

Query: 291 NEGDPELLVFIPFTSDVKIKSIAVVGGADGTSPSRMRAFINREGIDFSDAQNMQPVQEWE 470
           NEGDPELLVFIPFTSDVKIKSI+VVGGADGTSPSRMRAFINREGIDF+DAQNMQPVQEWE
Sbjct: 61  NEGDPELLVFIPFTSDVKIKSISVVGGADGTSPSRMRAFINREGIDFNDAQNMQPVQEWE 120

Query: 471 LAENLQGVLEYQTRYSRFQGVANLTLHFPDNFGGDTTKIYYIGLRGEATQNKRDVVATIV 650
           LAENLQGVLEYQTRYSRFQGVANLTLHFP+NFGGDTTKIYYIGLRGEATQNKRDVVATIV
Sbjct: 121 LAENLQGVLEYQTRYSRFQGVANLTLHFPENFGGDTTKIYYIGLRGEATQNKRDVVATIV 180

Query: 651 YEVMPNPSDHKTESETGGGFSHVE 722
           YE+MPNPSDHKT+SETGGGFSHVE
Sbjct: 181 YEIMPNPSDHKTKSETGGGFSHVE 204



to top

>AK070797:Os01g0559000 |
          Length = 172

 Score =  264 bits (674), Expect = 9e-71
 Identities = 127/132 (96%), Positives = 132/132 (100%)
 Frame = +3

Query: 327 FTSDVKIKSIAVVGGADGTSPSRMRAFINREGIDFSDAQNMQPVQEWELAENLQGVLEYQ 506
           FTSDVKIKSI+VVGGADGTSPSRMRAFINREGIDF+DAQNMQPVQEWELAENLQGVLEYQ
Sbjct: 41  FTSDVKIKSISVVGGADGTSPSRMRAFINREGIDFNDAQNMQPVQEWELAENLQGVLEYQ 100

Query: 507 TRYSRFQGVANLTLHFPDNFGGDTTKIYYIGLRGEATQNKRDVVATIVYEVMPNPSDHKT 686
           TRYSRFQGVANLTLHFP+NFGGDTTKIYYIGLRGEATQNKRDVVATIVYE+MPNPSDHKT
Sbjct: 101 TRYSRFQGVANLTLHFPENFGGDTTKIYYIGLRGEATQNKRDVVATIVYEIMPNPSDHKT 160

Query: 687 ESETGGGFSHVE 722
           +SETGGGFSHVE
Sbjct: 161 KSETGGGFSHVE 172



to top

>AK110198: |
          Length = 961

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
 Frame = +3

Query: 177 HIDIPKVVALNESVAGSVKSVFKSWDQRLETSGGFLESNEGDPELLVFIPFTSDVKIKSI 356
           H  + KVV   +S A + K   +  D     SGG    ++ D +LL+ + F   VK+  I
Sbjct: 144 HTSLLKVVEPKQSSALNEKPDRRLHDILAGPSGGKWLESDADDQLLISLAFKQQVKLSGI 203

Query: 357 AV--VGGADGTSPSRMRAFINREGIDFSDAQNMQPVQEWEL-------AENLQGVLEYQT 509
            +  +      +P +++ F+NR G+ F DA      QE+EL       AEN  G   Y  
Sbjct: 204 LLRTLPSHFAHAPRQVKIFVNRPGLGFEDATTENADQEFELPDEHVRGAENGGGGKAYSL 263

Query: 510 RYSRFQGVANLTLHFPDN-FGGDTTKIYYIGLRGEAT 617
           R+ +FQ V +LT+    N    +TT+I  I + G A+
Sbjct: 264 RFVKFQKVDSLTIAVLSNQEEAETTRIDAIDVFGIAS 300



to top

>Os02g0225200:Os02g0225200 |
          Length = 446

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
 Frame = -2

Query: 418 SLFINALILEGLVPSAPPTTAML-----LIFTSEVNGMKTSNSGSPSLLSRKPPEVSRRW 254
           SL + A ++  L P+A PT   L     ++  S    M   N   PS L+ +    +R W
Sbjct: 129 SLLLAASLMAALAPAAAPTVVALKASAGVLLASAAVTMAAVNKIQPSQLAEEQRNATRLW 188

Query: 253 ---SHDLKTDLTLPATDSFRA 200
                D++  L L A    RA
Sbjct: 189 RQLERDVRATLALAAAPVTRA 209



to top

>AK065753:Os11g0567800 |
          Length = 630

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -2

Query: 427 SIPSLFINALILEGLVPSAPPTTAMLLIFTSEVNGMKTSNSGSPSL 290
           S+  L++N+  + G VP+ P     L I  + ++G+  SN G+P L
Sbjct: 478 SLEELYLNSNRIIGEVPTLPTNLTYLDISNNILSGLVASNFGAPRL 523



to top

>AK100331:Os12g0576900 |
          Length = 705

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
 Frame = +2

Query: 77  RARKRKSVRERDGVPARSRVWGSQLRRR------LVALQSHRHPQ 193
           RAR RK  + +D VPA S +W  +L  R       V L+S   PQ
Sbjct: 57  RARARKYKKLKDKVPASSHIWRKELGSRSKGLKCCVCLKSVSSPQ 101



to top

>Os11g0246600:Os11g0246600 |
          Length = 483

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -2

Query: 115 AIPLSHALPLPRSLECSTSGVLLGFALRLLPS 20
           A+ +S + PL R+L  + SG+L G +  LLPS
Sbjct: 51  AVRISASSPLRRALSSAASGILPGGSAHLLPS 82



to top

>Os03g0346700:Os03g0346700 |
          Length = 949

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 135 CGDHNCAADWSLYNHIDIPKVVALNESVAGSVKSVFKSWD 254
           CG    + + S  +H + PKV     S AGSV  VF+  D
Sbjct: 741 CGFEGSSTELSCSSHSEEPKVNGSERSQAGSVWDVFRRQD 780


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 31,062,794
Number of extensions: 713851
Number of successful extensions: 1969
Number of sequences better than 10.0: 8
Number of HSP's gapped: 1967
Number of HSP's successfully gapped: 8
Length of query: 350
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 248
Effective length of database: 11,315,673
Effective search space: 2806286904
Effective search space used: 2806286904
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top