ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf53e17 |
|---|---|
| Clone Library Name | barley_pub |
>Q9GZP4:CA128_HUMAN UPF0424 protein C1orf128 - Homo sapiens (Human)| Length = 211 Score = 150 bits (378), Expect = 1e-35 Identities = 85/203 (41%), Positives = 117/203 (57%), Gaps = 11/203 (5%) Frame = +3 Query: 123 HDHECGDHNCAAD-----------WSLYNHIDIPKVVALNESVAGSVKSVFKSWDQRLET 269 H H G CAA+ + LY ID+ ++ LNES GS + VFK W++R + Sbjct: 5 HSHGGGGCRCAAEREEPPEQRGLAYGLYLRIDLERLQCLNESREGSGRGVFKPWEERTDR 64 Query: 270 SGGFLESNEGDPELLVFIPFTSDVKIKSIAVVGGADGTSPSRMRAFINREGIDFSDAQNM 449 S F+ES + D ELL IPFT +VK+K I ++G D + PS MR + N + F D + Sbjct: 65 SK-FVES-DADEELLFNIPFTGNVKLKGIIIMGEDDDSHPSEMRLYKNIPQMSFDDTER- 121 Query: 450 QPVQEWELAENLQGVLEYQTRYSRFQGVANLTLHFPDNFGGDTTKIYYIGLRGEATQNKR 629 +P Q + L +L G LEY T+ SRF V +L++H NFG DTTK++YIGLRGE T+ +R Sbjct: 122 EPDQTFSLNRDLTGELEYATKISRFSNVYHLSIHISKNFGADTTKVFYIGLRGEWTELRR 181 Query: 630 DVVATIVYEVMPNPSDHKTESET 698 V YE NP+DH+ T Sbjct: 182 HEVTICNYEASANPADHRVHQVT 204
>Q8BWR2:CA128_MOUSE UPF0424 protein C1orf128 homolog - Mus musculus (Mouse)| Length = 211 Score = 149 bits (377), Expect = 1e-35 Identities = 84/203 (41%), Positives = 117/203 (57%), Gaps = 11/203 (5%) Frame = +3 Query: 123 HDHECGDHNCAAD-----------WSLYNHIDIPKVVALNESVAGSVKSVFKSWDQRLET 269 H H G CAA+ + LY ID+ ++ LNES GS + VFK W++R + Sbjct: 5 HSHGGGGCRCAAEREEPPEQRGLAYGLYLRIDLERLQCLNESREGSGRGVFKPWEERTDR 64 Query: 270 SGGFLESNEGDPELLVFIPFTSDVKIKSIAVVGGADGTSPSRMRAFINREGIDFSDAQNM 449 S F+ES + D ELL IPFT +VK+K + ++G D + PS MR + N + F D + Sbjct: 65 SK-FVES-DADEELLFNIPFTGNVKLKGVIIMGEDDDSHPSEMRLYKNIPQMSFDDTER- 121 Query: 450 QPVQEWELAENLQGVLEYQTRYSRFQGVANLTLHFPDNFGGDTTKIYYIGLRGEATQNKR 629 +P Q + L ++ G LEY T+ SRF V +L++H NFG DTTKI+YIGLRGE T+ +R Sbjct: 122 EPEQTFSLNRDITGELEYATKISRFSNVYHLSIHISKNFGADTTKIFYIGLRGEWTELRR 181 Query: 630 DVVATIVYEVMPNPSDHKTESET 698 V YE NP+DH+ T Sbjct: 182 HEVTICNYEASANPADHRVHQVT 204
>Q6NYX8:CA128_DANRE UPF0424 protein C1orf128 homolog - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 210 Score = 143 bits (360), Expect = 1e-33 Identities = 82/194 (42%), Positives = 112/194 (57%) Frame = +3 Query: 117 CLHDHECGDHNCAADWSLYNHIDIPKVVALNESVAGSVKSVFKSWDQRLETSGGFLESNE 296 C +HE + ++ LY IDI K+ LNES G K VFK WDQR + + F+ES + Sbjct: 15 CECEHEPAERG--VEYELYRRIDIEKLQCLNESRDGDGKLVFKPWDQRTDRNK-FVES-D 70 Query: 297 GDPELLVFIPFTSDVKIKSIAVVGGADGTSPSRMRAFINREGIDFSDAQNMQPVQEWELA 476 D ELL IPFT VK+K I + G D + P+ +R F N + F D +P Q + L Sbjct: 71 ADEELLFNIPFTGSVKLKGIIISGEDDESHPAEIRLFKNIPQMSFDDTSR-EPEQAFRLN 129 Query: 477 ENLQGVLEYQTRYSRFQGVANLTLHFPDNFGGDTTKIYYIGLRGEATQNKRDVVATIVYE 656 + + LEY T+ +RF V +L++H NFG ++T++YYIGLRGE T+ R V YE Sbjct: 130 RDPRAELEYPTKIARFSNVEHLSIHVSRNFGAESTRVYYIGLRGEYTEAHRHEVTICNYE 189 Query: 657 VMPNPSDHKTESET 698 NP+DHK ES T Sbjct: 190 AAANPADHKVESIT 203
>Q9VK68:U424_DROME UPF0424 protein CG6153 - Drosophila melanogaster (Fruit fly)| Length = 211 Score = 139 bits (350), Expect = 2e-32 Identities = 80/199 (40%), Positives = 116/199 (58%), Gaps = 2/199 (1%) Frame = +3 Query: 117 CLHDHECGDH--NCAADWSLYNHIDIPKVVALNESVAGSVKSVFKSWDQRLETSGGFLES 290 C H+ DH ++SLY ID+ V LNE G KSVFK +++R + S ++ES Sbjct: 12 CSHEASDVDHALEMGIEYSLYTKIDLDNVECLNEETDGQGKSVFKPYEKRQDLSK-YVES 70 Query: 291 NEGDPELLVFIPFTSDVKIKSIAVVGGADGTSPSRMRAFINREGIDFSDAQNMQPVQEWE 470 + D ELL IPFT ++K+K I + G D + P+ ++ F NR + F DA+ +P QE++ Sbjct: 71 -DADEELLFNIPFTGNIKLKGIIISGANDDSHPNMVKIFKNRPRMTFDDAR-AKPDQEFQ 128 Query: 471 LAENLQGVLEYQTRYSRFQGVANLTLHFPDNFGGDTTKIYYIGLRGEATQNKRDVVATIV 650 L + +G +EY + F V +L+L+FP NFG D T+IYYIGLRGE T+ V Sbjct: 129 LTRDARGEIEYSPKVVTFSSVHHLSLYFPSNFGEDITRIYYIGLRGEFTEAHYHGVTICN 188 Query: 651 YEVMPNPSDHKTESETGGG 707 YE N +DHK ++ G G Sbjct: 189 YESRANAADHKEKAFDGVG 207
>Q6DJI5:CA128_XENLA UPF0424 protein C1orf128 homolog - Xenopus laevis (African clawed| frog) Length = 209 Score = 137 bits (345), Expect = 7e-32 Identities = 75/180 (41%), Positives = 110/180 (61%) Frame = +3 Query: 159 DWSLYNHIDIPKVVALNESVAGSVKSVFKSWDQRLETSGGFLESNEGDPELLVFIPFTSD 338 ++ L+ ID+ K+ LNES GS +SVF++W++R + + F+ES++ D ELL IPFT + Sbjct: 26 EYGLFRKIDLDKLQCLNESREGSGRSVFRAWEERNDRTR-FVESDD-DEELLFNIPFTGN 83 Query: 339 VKIKSIAVVGGADGTSPSRMRAFINREGIDFSDAQNMQPVQEWELAENLQGVLEYQTRYS 518 VK+K I ++G T P+ +R F N + F D + Q + L ++ G LEY T+ + Sbjct: 84 VKLKGIVLIGEDSDTHPAELRLFKNVPHMSFDDT-GREADQTFSLNIDVNGNLEYPTKIA 142 Query: 519 RFQGVANLTLHFPDNFGGDTTKIYYIGLRGEATQNKRDVVATIVYEVMPNPSDHKTESET 698 RF V++L++H NFG + TKIYYIGLRGE T+ R V YE NP+DHK T Sbjct: 143 RFSNVSHLSIHISKNFGAENTKIYYIGLRGEWTEAHRHEVTICNYEAAANPADHKVSQIT 202
>Q29L80:U424_DROPS UPF0424 protein GA19395 - Drosophila pseudoobscura (Fruit fly)| Length = 211 Score = 135 bits (341), Expect = 2e-31 Identities = 82/204 (40%), Positives = 117/204 (57%), Gaps = 9/204 (4%) Frame = +3 Query: 123 HDHE-CG------DH--NCAADWSLYNHIDIPKVVALNESVAGSVKSVFKSWDQRLETSG 275 HDH CG DH ++SLY ID + LNE GS K+VFK ++ R + S Sbjct: 7 HDHGGCGHEATDVDHALEMGIEYSLYTKIDAENLECLNEETEGSGKTVFKPYESRQDMSK 66 Query: 276 GFLESNEGDPELLVFIPFTSDVKIKSIAVVGGADGTSPSRMRAFINREGIDFSDAQNMQP 455 F++S + D ELL IPFT ++K+K I + G D + P++++ F NR + F DA+ ++ Sbjct: 67 -FVQS-DADEELLFNIPFTGNIKLKGIIICGANDDSHPNKVKIFKNRPKMTFDDAK-VKV 123 Query: 456 VQEWELAENLQGVLEYQTRYSRFQGVANLTLHFPDNFGGDTTKIYYIGLRGEATQNKRDV 635 QE+EL + +G +EY + F V +LTL+FP NFG D T+IYYIGLRGE ++ Sbjct: 124 DQEFELTRDPRGEIEYSPKVVNFSSVHHLTLYFPSNFGDDKTRIYYIGLRGEFSEAHYHG 183 Query: 636 VATIVYEVMPNPSDHKTESETGGG 707 V YE N +DHK + G G Sbjct: 184 VTICNYEARANAADHKDKVFDGVG 207
>Q95ZI6:YOJ9_CAEEL UPF0424 protein ZK353.9 - Caenorhabditis elegans| Length = 208 Score = 131 bits (330), Expect = 4e-30 Identities = 80/206 (38%), Positives = 117/206 (56%), Gaps = 15/206 (7%) Frame = +3 Query: 117 CLHDHECGDHNCAAD------------WSLYNHIDIPKVVALNESVAGSVKSVFKSW--- 251 C H H HNCAA+ + + ++ID+ KV LNESV G+ K VFK Sbjct: 2 CSHGHS---HNCAAEHIPEVPGDDVYRYDMVSYIDMEKVTTLNESVDGAGKKVFKVMEKR 58 Query: 252 DQRLETSGGFLESNEGDPELLVFIPFTSDVKIKSIAVVGGADGTSPSRMRAFINREGIDF 431 D RLE ++ES + D ELL IPFT V++ ++++G DG+ P+++R F +RE + F Sbjct: 59 DDRLE----YVES-DCDHELLFNIPFTGHVRLTGLSIIGDEDGSHPAKIRLFKDREAMSF 113 Query: 432 SDAQNMQPVQEWELAENLQGVLEYQTRYSRFQGVANLTLHFPDNFGGDTTKIYYIGLRGE 611 D +++ QE +L ++ QG+++Y + S+F + NL++ NFG D TKIYYIGLRGE Sbjct: 114 DDC-SIEADQEIDLKQDPQGLVDYPLKASKFGNIHNLSILVDANFGEDETKIYYIGLRGE 172 Query: 612 ATQNKRDVVATIVYEVMPNPSDHKTE 689 R +A YE DHK E Sbjct: 173 FQHEFRQRIAIATYESRAQLKDHKNE 198
>Q8CDN6:TXNL1_MOUSE Thioredoxin-like protein 1 - Mus musculus (Mouse)| Length = 289 Score = 58.2 bits (139), Expect = 6e-08 Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 5/129 (3%) Frame = +3 Query: 249 WDQRLETSGGFLESNEGDPELLVFIPFTSDVKIKSIAVVGGADGTSPSRMRAFINR-EGI 425 +D L FLES + D +LL+ + F VK+ S+ G +G P ++ FIN + Sbjct: 146 FDNCLRKDMSFLES-DCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSM 204 Query: 426 DFSDAQNMQPVQEWELAEN---LQGVLEYQTRYSRFQGVANLTLHFPDNFG-GDTTKIYY 593 DF +A+ +P Q EL E+ G++ RY +FQ V ++TL N G +TT+I Y Sbjct: 205 DFEEAERSEPTQALELTEDDIKEDGIV--PLRYVKFQNVNSVTLFVQSNQGEEETTRISY 262 Query: 594 IGLRGEATQ 620 G Q Sbjct: 263 FTFIGTPVQ 271
>Q920J4:TXNL1_RAT Thioredoxin-like protein 1 - Rattus norvegicus (Rat)| Length = 289 Score = 57.8 bits (138), Expect = 7e-08 Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 5/129 (3%) Frame = +3 Query: 249 WDQRLETSGGFLESNEGDPELLVFIPFTSDVKIKSIAVVGGADGTSPSRMRAFINR-EGI 425 +D L FLES + D +LL+ + F VK+ S+ G +G P ++ FIN + Sbjct: 146 FDNCLRKDLSFLES-DCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSM 204 Query: 426 DFSDAQNMQPVQEWELAEN---LQGVLEYQTRYSRFQGVANLTLHFPDNFG-GDTTKIYY 593 DF +A+ +P Q EL E+ G++ RY +FQ V ++TL N G +TT+I Y Sbjct: 205 DFEEAERSEPTQALELTEDDIKEDGIV--PLRYVKFQNVNSVTLFVQSNQGEEETTRISY 262 Query: 594 IGLRGEATQ 620 G Q Sbjct: 263 FTFIGTPVQ 271
>O43396:TXNL1_HUMAN Thioredoxin-like protein 1 - Homo sapiens (Human)| Length = 289 Score = 57.0 bits (136), Expect = 1e-07 Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 5/129 (3%) Frame = +3 Query: 249 WDQRLETSGGFLESNEGDPELLVFIPFTSDVKIKSIAVVGGADGTSPSRMRAFINR-EGI 425 +D L FLES + D +LL+ + F VK+ S+ G +G P ++ FIN + Sbjct: 146 FDNCLRKDTTFLES-DCDEQLLITVAFNQPVKLYSMKFQGPDNGQGPKYVKIFINLPRSM 204 Query: 426 DFSDAQNMQPVQEWELAEN---LQGVLEYQTRYSRFQGVANLTLHFPDNFG-GDTTKIYY 593 DF +A+ +P Q EL E+ G++ RY +FQ V ++T+ N G +TT+I Y Sbjct: 205 DFEEAERSEPTQALELTEDDIKEDGIV--PLRYVKFQNVNSVTIFVQSNQGEEETTRISY 262 Query: 594 IGLRGEATQ 620 G Q Sbjct: 263 FTFIGTPVQ 271
>Q97FX3:SPEE_CLOAB Spermidine synthase - Clostridium acetobutylicum| Length = 286 Score = 33.9 bits (76), Expect = 1.1 Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 12/145 (8%) Frame = +3 Query: 162 WSLYNHIDIPKVVALNESVAGSVKSVFKSWDQ-RLETSG------GFLESNEGDP----E 308 W +H D K + S K+ F+ D + ET G G++ E D E Sbjct: 5 WYSESHADDTKFSIRVKEHLYSEKTPFQQIDFFKSETFGTFFTLDGYIMMTEKDEFIYHE 64 Query: 309 LLVFIPFTSDVKIKSIAVVGGADGTSPSRMRAFINREGIDFSDAQNMQPVQEWELAENLQ 488 ++ +P + KIK + +VGG DG + +RE + ++ + + V+ E L Sbjct: 65 MITHVPMAVNPKIKKVLIVGGGDGGT--------SREILRYNTIEKVDMVEIDERVVRL- 115 Query: 489 GVLEYQTRYS-RFQGVANLTLHFPD 560 +Y T+ S + + LT+HF D Sbjct: 116 -CQKYLTQTSCKLDNDSRLTMHFED 139
>P20806:7LESS_DROVI Protein sevenless - Drosophila virilis (Fruit fly)| Length = 2594 Score = 32.3 bits (72), Expect = 3.3 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +3 Query: 381 TSPSRMRAFINREGIDFSDAQNMQPVQEWELAENLQGVLEYQTRYSRFQG 530 T P R+R F+ R+ A N+ + W++ E G Q R S ++G Sbjct: 1323 TQPRRLRVFVERQAAPLQLAPNVSALLRWDVPEEHAGSQSLQYRISCWRG 1372
>P54159:YPBR_BACSU Uncharacterized protein ypbR - Bacillus subtilis| Length = 1193 Score = 31.2 bits (69), Expect = 7.4 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 3/40 (7%) Frame = -2 Query: 418 SLFINALILEGLVPSAP-PTTAMLLIFTSEVNG--MKTSN 308 S F NAL+ E ++PS+P PTTA + T +NG KT+N Sbjct: 626 SSFANALVGERVLPSSPTPTTATINKITKPINGNLNKTAN 665
>Q4FPR9:NRDR_PSYAR Transcriptional repressor nrdR - Psychrobacter arcticum| Length = 152 Score = 31.2 bits (69), Expect = 7.4 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Frame = -1 Query: 326 WDENK*LRVTLITLQKTPGSL---EALVPRLEDRFDAPGHRFIQSHHLGDV 183 +D +K R L+ LQK P ++ EA++ R+E R G R + S LG++ Sbjct: 61 YDNDKLRRSILLPLQKRPITIDEQEAMISRIEKRVRQMGEREVSSKVLGEI 111
>P48598:IF4E_DROME Eukaryotic translation initiation factor 4E - Drosophila| melanogaster (Fruit fly) Length = 259 Score = 31.2 bits (69), Expect = 7.4 Identities = 13/39 (33%), Positives = 18/39 (46%) Frame = +3 Query: 162 WSLYNHIDIPKVVALNESVAGSVKSVFKSWDQRLETSGG 278 WSLYNHI P + L + K++ W+ GG Sbjct: 117 WSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAANKQGG 155
>Q6D1A1:CYSJ_ERWCT Sulfite reductase [NADPH] flavoprotein alpha-component - Erwinia| carotovora subsp. atroseptica (Pectobacterium atrosepticum) Length = 609 Score = 31.2 bits (69), Expect = 7.4 Identities = 22/63 (34%), Positives = 26/63 (41%) Frame = -2 Query: 838 VQAGPVLFVQNSSELKFLSNLRTAARHGSAEEACH*HAYSTCEKPPPVSDSVL*SDGLGI 659 V AG F Q E L T AEEA H + +K P + D+ GLG Sbjct: 104 VNAGDYKFKQIGQEKLLLIVASTQGEGEPAEEAVALHKFLLSKKAPELKDTAFAVFGLGD 163 Query: 658 TSY 650 TSY Sbjct: 164 TSY 166
>Q00174:LAMA_DROME Laminin subunit alpha precursor - Drosophila melanogaster (Fruit fly)| Length = 3712 Score = 30.8 bits (68), Expect = 9.7 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%) Frame = -3 Query: 189 GCR-CDCRATNRRRSCDPHT 133 GCR CDC A + CDPHT Sbjct: 2013 GCRACDCGAASNSTQCDPHT 2032
>P03870:FLP_YEAST Site-specific recombinase Flp - Saccharomyces cerevisiae (Baker's| yeast) Length = 423 Score = 30.8 bits (68), Expect = 9.7 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 408 INREGIDFSDAQNMQPVQEWELAENLQGVLEYQTRYSRFQGV 533 I++E I D N P++EW+ E L+G E RY + G+ Sbjct: 367 ISKEMIALKDETN--PIEEWQHIEQLKGSAEGSIRYPAWNGI 406
>Q9UQ52:CNTN6_HUMAN Contactin-6 precursor - Homo sapiens (Human)| Length = 1028 Score = 30.8 bits (68), Expect = 9.7 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 4/79 (5%) Frame = +3 Query: 207 NESVAGSVKSVFKSWDQRLETSGGFLESNEGDPELLVFIPFTSDVKIKSIAVVGGADGTS 386 NES K +++ Q ++ LE+N ELLV PF D I+ V G DG+S Sbjct: 931 NESEVLGYKILYR---QNRQSKTHILETNNTSAELLV--PFEEDYLIEIRTVSDGGDGSS 985 Query: 387 PSRMR----AFINREGIDF 431 +R + ++ GI F Sbjct: 986 SEEIRIPKMSSLSSRGIQF 1004 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 187,058,343 Number of extensions: 4103957 Number of successful extensions: 10915 Number of sequences better than 10.0: 19 Number of HSP's gapped: 10897 Number of HSP's successfully gapped: 19 Length of query: 350 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 236 Effective length of database: 69,416,809 Effective search space: 16382366924 Effective search space used: 16382366924 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
