ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf51a09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK071665:Os04g0519900 | 332 | 8e-91 | 2 | Os07g0295800:Os07g0295800 | 132 | 1e-30 | 3 | Os03g0621600:Os03g0621600 | 34 | 0.78 | 4 | AB096259:Os10g0403000 | 34 | 0.78 | 5 | D90406:Os04g0650000 | 32 | 3.0 | 6 | AK098910:Os04g0650000 | 32 | 3.0 | 7 | AK071913:Os04g0650000 | 32 | 3.0 | 8 | AK067996:Os05g0230900 | 32 | 3.0 | 9 | AK061729:Os04g0650000 | 32 | 3.0 | 10 | AK105540:Os11g0215400 | 30 | 8.6 |
|---|
>AK071665:Os04g0519900 | Length = 217 Score = 332 bits (852), Expect = 8e-91 Identities = 161/217 (74%), Positives = 184/217 (84%), Gaps = 2/217 (0%) Frame = +2 Query: 2402 NDGNTEPSSYVSLFSNMPGKLTQELMDLRGEEFSCGRNMTTDFVTFTVKYGCRSYKASNT 2581 N GNTEPSSYV+LFSN PGKLT+EL+DLR EEFSCGRN DFVTFT+KYGC SY+ +NT Sbjct: 1 NSGNTEPSSYVTLFSNTPGKLTKELVDLRDEEFSCGRNRAIDFVTFTMKYGCLSYEGTNT 60 Query: 2582 GWSKSEVPVLHVESDSADDDGRRTVVSVDTRSSTRWSLAINMQEIDDFTIEVASDKLVQL 2761 GWSKSEVPVL ++SDS +D R+T++SVDT+SSTRWSLAIN QEIDDFT+ V S+ LV L Sbjct: 61 GWSKSEVPVLSLKSDSVTNDARQTIISVDTKSSTRWSLAINKQEIDDFTVHVDSENLVPL 120 Query: 2762 GGKTEVGGWHTIQFAGGKNAPTKFQLALFWSSNATHASPK--EAEGPPLLVKLRTDVNRV 2935 G K+E+ GWHTIQFAGGK++PTKFQL LFW+SN+ A PK E+E L+KLRTDVNRV Sbjct: 121 GNKSEIDGWHTIQFAGGKDSPTKFQLTLFWASNSKDAFPKQVESEDHSFLLKLRTDVNRV 180 Query: 2936 TPMVETVLEKLPRWCAPFGKSTSPYTLAFLTALPVNI 3046 TP V VLEKLP WCAPFGKSTSPYTLAFLTALPVNI Sbjct: 181 TPKVGRVLEKLPGWCAPFGKSTSPYTLAFLTALPVNI 217
>Os07g0295800:Os07g0295800 | Length = 844 Score = 132 bits (333), Expect = 1e-30 Identities = 106/400 (26%), Positives = 179/400 (44%), Gaps = 15/400 (3%) Frame = +2 Query: 605 GSDALDLAVQYVYAEAEKIQKTAHWDVDVQLELFHTDIGANRLAGGLFKGK------TLL 766 GS L+ A +Y+ + E++ A + +++E L G F + TL Sbjct: 114 GSPGLEAAARYIKGQLEELAARAGPEYRIEVE--------ESLVSGSFSMRFLRHRVTLT 165 Query: 767 YSDLKHVVLRIVPKYLPEAEENLILVSSHIDTVSTTEGAGDCSSCVGVMLEMARGVAQWA 946 Y + K++V+RI + E ++ LV+ H D+ + GA DC SCV MLE++R + Sbjct: 166 YRNHKNIVMRISSN-VSEDQDLAFLVNGHFDSPLGSPGAADCGSCVASMLELSRLIIDSG 224 Query: 947 HGFKSGVLFLFNTGEEEGLDGAHSFITQHHWRNSVRFAVDLEAMGISGKSTLFQGTHQWA 1126 V+FLFN EE Sbjct: 225 WVPSQPVIFLFNGAEE-------------------------------------------- 240 Query: 1127 LESFAAVAKYPSAQIATQDVFRSGAIKSATDFQIY-EEVAGLPGLDFAYTDTTSVYHTKN 1303 F AKYP A QD+F G I TD++I+ E++ +PGLD + YHT Sbjct: 241 --LFLLTAKYPMANSVAQDMF--GIIPGDTDYRIFAEDITNIPGLDIIFVLGGYFYHTSY 296 Query: 1304 DKMELLQPGSLQHNGENMLAFLLHAASSPKFMKD---AHQAKQDSTEQKNAIFFDILSKY 1474 D +E L PGS+Q GEN+ + +SP +K+ +++A + AIFFD L+ + Sbjct: 297 DTVENLLPGSIQARGENLFNLVKAFTNSPMLLKENKRSNEAAMPIKDDLRAIFFDYLTWF 356 Query: 1475 MVVYPQRLATMFHNSIIFQSLLIWGTSLLMGGRPGLVSFGISCLSIILTLI---FSTVLP 1645 MV+YP+ ++ + H+ + ++ + L L+S+ ++ L ++ ++ F +L Sbjct: 357 MVIYPRGVSLVLHSLPV--AIFLLAPLFLTSPNITLMSWSLTVLDLMRGMLLHAFGAILA 414 Query: 1646 VVVAFVLPHICPFP--ISFVANPWLVVGLFGSPALLGAFI 1759 +V+ V C +S+ A+P+L +F +L G FI Sbjct: 415 IVIPAVAAAACALRAWVSWFAHPYLAFLMFVPTSLAGLFI 454
>Os03g0621600:Os03g0621600 | Length = 1029 Score = 33.9 bits (76), Expect = 0.78 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = -2 Query: 3342 QIETMHSIVPISGNIKQHPSYHSNPKFFDITQTVHSSHIFFTNGSPLRLTFR 3187 +I+ +HS P+ GN+ + +P +ITQ +++ F NG L L R Sbjct: 630 KIQAIHSKTPMYGNVMTKCNVSGSPCVLEITQLYDDAYLPFNNGQELMLRHR 681
>AB096259:Os10g0403000 | Length = 555 Score = 33.9 bits (76), Expect = 0.78 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 3/72 (4%) Frame = +2 Query: 1916 LILGTYLKVGASYIALIWLVSP---AFAYGLMEATLTPVRSPKQLKVFTLVLALAVPVMS 2086 L+ G L A+ L W SP A+A+G TP+ P+ L VF + AL Sbjct: 36 LLAGAVLLAFATAAVLAWAASPGGPAWAHGRGRLGATPIEGPRGLPVFGSIFAL------ 89 Query: 2087 SAGLFIRMVDVM 2122 S GL R +D M Sbjct: 90 SRGLPHRALDAM 101
>D90406:Os04g0650000 | Length = 458 Score = 32.0 bits (71), Expect = 3.0 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 3/42 (7%) Frame = +1 Query: 1048 STFCC---RFGSYGYQWEIHPFSGYSPMGFGELCCCSEIPIC 1164 ST CC +G Y Y W P G + CC E PIC Sbjct: 376 STTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPIC 417
>AK098910:Os04g0650000 | Length = 458 Score = 32.0 bits (71), Expect = 3.0 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 3/42 (7%) Frame = +1 Query: 1048 STFCC---RFGSYGYQWEIHPFSGYSPMGFGELCCCSEIPIC 1164 ST CC +G Y Y W P G + CC E PIC Sbjct: 376 STTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPIC 417
>AK071913:Os04g0650000 | Length = 458 Score = 32.0 bits (71), Expect = 3.0 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 3/42 (7%) Frame = +1 Query: 1048 STFCC---RFGSYGYQWEIHPFSGYSPMGFGELCCCSEIPIC 1164 ST CC +G Y Y W P G + CC E PIC Sbjct: 376 STTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPIC 417
>AK067996:Os05g0230900 | Length = 291 Score = 32.0 bits (71), Expect = 3.0 Identities = 16/77 (20%), Positives = 35/77 (45%) Frame = +2 Query: 1052 RFAVDLEAMGISGKSTLFQGTHQWALESFAAVAKYPSAQIATQDVFRSGAIKSATDFQIY 1231 ++ + + G K+ + + T+ + ++ + Y I+T DV+++ + QI Sbjct: 194 KYTIAMMGYGPEDKNAVLELTYNYGVKEYDKGNAYAQIAISTDDVYKTAEVIRQNGGQIT 253 Query: 1232 EEVAGLPGLDFAYTDTT 1282 E LPG++ T T Sbjct: 254 REPGPLPGINTKITACT 270
>AK061729:Os04g0650000 | Length = 213 Score = 32.0 bits (71), Expect = 3.0 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 3/42 (7%) Frame = +1 Query: 1048 STFCC---RFGSYGYQWEIHPFSGYSPMGFGELCCCSEIPIC 1164 ST CC +G Y Y W P G + CC E PIC Sbjct: 131 STTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPIC 172
>AK105540:Os11g0215400 | Length = 428 Score = 30.4 bits (67), Expect = 8.6 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = +2 Query: 2528 FVTFTVKYGCRSYKASNTGWSKSEVPVLHVESDSADDDGRRTVVSVDTRSSTRW 2689 F T K S KA GW + L+V S + +V +DT SST W Sbjct: 54 FRYITNKTSRLSTKAVQVGWDRGLQTSLYVISVGLGTPAKTQIVEIDTGSSTSW 107 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 101,945,065 Number of extensions: 2462751 Number of successful extensions: 6917 Number of sequences better than 10.0: 10 Number of HSP's gapped: 6910 Number of HSP's successfully gapped: 11 Length of query: 1122 Length of database: 15,399,855 Length adjustment: 111 Effective length of query: 1011 Effective length of database: 10,955,304 Effective search space: 11075812344 Effective search space used: 11075812344 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
