ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf51a09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121271.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106H08, full insert sequence Length = 4625 Score = 1045 bits (527), Expect = 0.0 Identities = 863/975 (88%) Strand = Plus / Plus Query: 434 ttgctggggttgtttatacttttccttcatggatcctggtctgtttaccgtatgcagttt 493 |||||||| ||||| || | |||||||||||||||||||||||||| ||| | |||||| Sbjct: 315 ttgctgggattgttgatggtcttccttcatggatcctggtctgtttatcgttttcagttt 374 Query: 494 gcaaatcttcctttgccccttaatgctgagcaggctggtaagcgggggttctcagaggct 553 ||||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||| Sbjct: 375 gcaaatcttcctttgccccttgatgctgaacaggctggcaagcgtgggttctcagaggca 434 Query: 554 tctgcccttaagcatgtgaagtacttgacaagtctgggtcctcatccagttggttcagat 613 ||||| || ||||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 435 tctgctctggagcatgttaagtactttgcagccttgggtcctcatccagttggttcagat 494 Query: 614 gccctcgatcttgctgtgcagtatgtatatgcagaagcagagaaaatacagaagacagcc 673 || ||||||||||||| |||||||||||||||| |||||| |||||| |||||||||| Sbjct: 495 tccatcgatcttgctgttcagtatgtatatgcagtagcagataaaataaagaagacagct 554 Query: 674 cattgggacgttgatgttcaactggagctgttccacacagatattggtgcaaatcgtcta 733 |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 555 cattgggatgttgatgtccaactggagctgttccacacagatattggtgcaaatcgtatg 614 Query: 734 gctggtggccttttcaagggaaaaacactcttgtactcagaccttaagcacgtggtcctc 793 ||||||||||||||||| |||||||| | |||| ||| |||||||||| ||| | || Sbjct: 615 gctggtggccttttcaatggaaaaactatgctgtattcaaaccttaagcatgtgatactg 674 Query: 794 agaattgttcccaagtatttaccagaagctgaagaaaatttgatacttgtctcttctcat 853 ||| ||||||||||||||||||||||||| || || |||||||| ||||| ||||||||| Sbjct: 675 agagttgttcccaagtatttaccagaagccgaggacaatttgattcttgtttcttctcat 734 Query: 854 attgacacagtttccacaacggaaggtgccggagactgcagttcatgtgtaggagtcatg 913 || || ||||||||||| || |||||||| ||||| || ||||||||||| ||||||||| Sbjct: 735 atcgatacagtttccacgaccgaaggtgctggagattgtagttcatgtgtgggagtcatg 794 Query: 914 ctagagatggcacggggagttgctcagtgggctcatgggtttaagagtggtgtcctgttt 973 ||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 795 ttagagcttgcacgaggagtggctcagtgggctcatgggtttaagagtggtgtcctgttt 854 Query: 974 ctgttcaacacaggggaagaagagggccttgatggggcccacagttttataactcagcac 1033 || |||||||||||||||||||| || |||||||| ||||| |||||||||||||||||| Sbjct: 855 ctattcaacacaggggaagaagaaggtcttgatggtgcccatagttttataactcagcac 914 Query: 1034 cactggagaaactcagtacgttttgctgtcgatttggaagctatgggtatcagtgggaaa 1093 | ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 915 cgctggagaaattcagtacgttttgcaatcgatttggaagctatgggtatcagcgggaaa 974 Query: 1094 tccaccctttttcagggtactcaccaatgggctttggagagctttgctgctgtagcgaaa 1153 || || || || |||||||| | || |||||| |||| ||||||||| ||||||| ||| Sbjct: 975 tctactctcttccagggtacagatcattgggctctggaaagctttgcttctgtagccaaa 1034 Query: 1154 tacccatctgcgcagatagctacacaggatgttttccgttctggagcaataaaatctgct 1213 || |||||||| ||||||||| ||||||| ||||| | ||||||||||||||||||||| Sbjct: 1035 tatccatctgctcagatagcttcacaggacgtttttcagtctggagcaataaaatctgct 1094 Query: 1214 actgatttccaaatatatgaggaggttgctggtcttcctggccttgattttgcatataca 1273 |||||||| ||||||||| |||| |||| |||||||||||| ||||||||||| |||||| Sbjct: 1095 actgattttcaaatatatcaggaagttggtggtcttcctggtcttgattttgcttataca 1154 Query: 1274 gatacgacatccgtgtatcacacaaagaatgacaaaatggagctcctgcaaccaggatcc 1333 |||| |||||| || |||||||| ||||||||||||||| ||| ||| ||||||||||| Sbjct: 1155 gataggacatcagtctatcacacgaagaatgacaaaatgaagcatctgaaaccaggatcc 1214 Query: 1334 cttcagcataatggagaaaatatgcttgccttcctactccatgctgcttcatcaccaaaa 1393 |||||||||| |||||||||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 1215 cttcagcatattggagaaaatatgcttgctttcctacttcatgctgccgcatcaccaaaa 1274 Query: 1394 tttatgaaagatgca 1408 ||||||||||||||| Sbjct: 1275 tttatgaaagatgca 1289 Score = 720 bits (363), Expect = 0.0 Identities = 1002/1215 (82%) Strand = Plus / Plus Query: 1646 gttgtggtggcatttgttctgccacatatttgtccctttcctatttcatttgttgcaaat 1705 |||||||| ||| ||| |||||||||||||||| |||||||| | |||||||||| | Sbjct: 2863 gttgtggttgcaattgctctgccacatatttgttcctttcctgtgacatttgttgcgcac 2922 Query: 1706 ccgtggttagttgttggcttatttggttcacctgcactgcttggggcattcattggtcag 1765 || |||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||| Sbjct: 2923 ccatggttagtagttgggttatttggttcacctgcactacttggggcattcatcggtcaa 2982 Query: 1766 catattggatttattctcctgaagaggcacattcaacaagtgtattcaagaacaaagcca 1825 ||||||||||| ||| | |||| ||||| || |||| || ||||| | ||||||| || Sbjct: 2983 catattggattcattattttgaaaaggcatcttaaacatgtatattctataacaaagtca 3042 Query: 1826 ggtctaactggtaacatgatggatatcatcgttggcctggaagctgagaggtggatttac 1885 || ||| || ||||||| |||| || ||| ||||||||||||||||||||||| Sbjct: 3043 ggactagctcataacatgctggaacaaattgttaacctggaagctgagaggtggattttt 3102 Query: 1886 aaatctggttttgtccaatggctcatagttttgatactcggaacctatttgaaggtcgga 1945 |||||||||||||| |||||||| |||||| ||||||| ||||| || |||||||| ||| Sbjct: 3103 aaatctggttttgtacaatggctaatagttctgatactgggaacatacttgaaggttgga 3162 Query: 1946 gcatcctatatagcactcatctggcttgtttcgcctgcttttgcatatggtcttatggaa 2005 |||| || |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 3163 tcatcttacatagcactcatctggcttgtttcgcctgcttttgcatacggtcttatggaa 3222 Query: 2006 gcaacactgactcctgtaaggtcacctaaacagcttaaggtctttacattggtcctggct 2065 |||||||| |||||| |||||||||||||||| ||||| |||||||||| ||||| Sbjct: 3223 gcaacactatctcctgctcggtcacctaaacagctcaaggttattacattggttctggca 3282 Query: 2066 ttggctgtgccagttatgtcatctgctggtttgtttattcgcatggtagatgtgatggtt 2125 ||||||| |||||| | |||||||||||||| ||||||||||||| ||||| || || Sbjct: 3283 ttggctgcaccagttgtctcatctgctggtttagttattcgcatggttgatgttataatt 3342 Query: 2126 ggcagtattgtacgtgttgataggaaccctggtgggctaccagactggcttggaaatgta 2185 || ||||||||||| ||||||||||||||||||| |||||||| |||||||| |||||| Sbjct: 3343 gggagtattgtacgcattgataggaaccctggtggcctaccagattggcttggcaatgta 3402 Query: 2186 gtagttgctgttgccatcgctatagtcgtgtccttgacgtttgtgtatcttctttcgtat 2245 ||||| |||||||||| ||||| ||| | | || || ||||||||||||||||| || Sbjct: 3403 gtagtctctgttgccattgctattgtcatatgttttacctttgtgtatcttctttcttac 3462 Query: 2246 gtccatatttcaggtgcgaagaaaacgcttctttatgtgttgtctgcattgtttggtctt 2305 || ||||| |||||||| || | || ||| || | |||| | | ||| ||||||||| Sbjct: 3463 gttcatatatcaggtgctaaaaggactcttggttttctgttatgtatattctttggtctt 3522 Query: 2306 gcccttgtactagtatcaagtggcattgttccagcattcacagaggatattgctcgttct 2365 || |||| ||| || |||||||||||| | || |||||||| |||||||||||||| ||| Sbjct: 3523 gcacttgcactggtgtcaagtggcattctccctgcattcacggaggatattgctcggtct 3582 Query: 2366 gtaaatgttgtgcatgttgttgatactacaagaatgaatgatggaaacacagaaccatca 2425 ||||||||||||||||||||||| ||||||| ||||| ||| || |||||||||||| Sbjct: 3583 gtaaatgttgtgcatgttgttgacactacaacggtgaatagtggtaatacagaaccatca 3642 Query: 2426 tcctacgtttccctgttctcgaacatgcctggaaagttgacacaggaattgatggacctc 2485 || || ||| | |||||||| || | ||||||||||||||| ||||||| | ||||| Sbjct: 3643 tcatatgttactctgttctccaatacacctggaaagttgacaaaggaattagtagacctt 3702 Query: 2486 agaggggaagagttttcttgcggaaggaatatgacaactgatttcgtgacatttaccgtg 2545 |||| ||||| |||||||| || ||||||| | | | |||||| || ||||||||| || Sbjct: 3703 agagatgaagaattttcttgtgggaggaatagggctattgattttgttacatttaccatg 3762 Query: 2546 aagtatggctgcaggagttacaaagcgagcaacactggatggagcaaatcagaagttcca 2605 || |||||||| ||||||| ||| || ||| ||||||||||||||||||||||| ||| Sbjct: 3763 aaatatggctgtttgagttacgaagggaccaatactggatggagcaaatcagaagtgcca 3822 Query: 2606 gtgctccatgtcgaaagtgattctgctgatgatgatggccgtagaacagtagtatcagtt 2665 |||||| | | |||||||||||| | |||||| || |||| || |||||||| Sbjct: 3823 gtgctcagtttgaaaagtgattctgttaccaatgatgctcgacaaacaataatatcagtt 3882 Query: 2666 gataccaggtcatctacacgatggtcgctcgcaatcaatatgcaggaaattgacgacttc 2725 ||||| | ||||||||| || ||||| || |||||||||| || |||||||| |||||| Sbjct: 3883 gatactaagtcatctacgcgttggtcactggcaatcaataaacaagaaattgatgacttc 3942 Query: 2726 actattgaagtggcttcagataagttggttcaactgggtggtaagactgaggtcggtgga 2785 || || | |||| ||| || || ||||||| ||||||| ||||| ||| ||| ||| Sbjct: 3943 acagttcatgtggattcggagaacttggttccactgggtaataagagcgagatcgatggg 4002 Query: 2786 tggcatacaatccagtttgcaggcggcaagaacgcgccaacgaaattccagttagccctt 2845 |||||||||||||||||||| || || ||| || | ||||| ||||| ||| || ||||| Sbjct: 4003 tggcatacaatccagtttgctggtggtaaggactcaccaacaaaatttcagctaaccctt 4062 Query: 2846 ttctggtcaagtaat 2860 |||||| |||||||| Sbjct: 4063 ttctgggcaagtaat 4077 Score = 200 bits (101), Expect = 2e-47 Identities = 143/157 (91%) Strand = Plus / Plus Query: 1456 cgacattctgagcaagtacatggtggtctatccacagcgactagcaaccatgtttcacaa 1515 |||||||||| ||||||||||||| || |||||||||||||| |||||||||||||||| Sbjct: 1337 cgacattctgggcaagtacatggtagtatatccacagcgacttacaaccatgtttcacaa 1396 Query: 1516 ctcaataatatttcagtcacttctgatatggggaacatcactgcttatgggtggacgtcc 1575 |||||||||||||||||| ||||| || |||||||| ||| |||||||||||||||| || Sbjct: 1397 ctcaataatatttcagtcccttcttatctggggaacttcattgcttatgggtggacggcc 1456 Query: 1576 tggtcttgtgtccttcggaatatcatgtttgagcatt 1612 ||| ||||||||||| ||||||||||||||| ||||| Sbjct: 1457 tggccttgtgtcctttggaatatcatgtttgggcatt 1493 Score = 109 bits (55), Expect = 7e-20 Identities = 121/143 (84%) Strand = Plus / Plus Query: 2907 taaaactaagaacagacgtgaatagggtcacgccgatggtcgagacggttctcgagaagc 2966 ||||||||||||| || |||||||| || || |||| ||| | | |||||||||||||| Sbjct: 4130 taaaactaagaacggatgtgaatagagttacaccgaaggttggcagggttctcgagaagc 4189 Query: 2967 ttccacgctggtgtgcgcccttcggcaagtcgacatctccttacacgctggcgttcctga 3026 ||||| | |||||||| ||||| |||||||| || |||||||| || |||| ||| ||| Sbjct: 4190 ttccaggatggtgtgcaccctttggcaagtctacttctccttatacattggctttcttga 4249 Query: 3027 ccgctcttccagtcaatatttag 3049 |||||||||| |||||||||||| Sbjct: 4250 ccgctcttcctgtcaatatttag 4272 Score = 56.0 bits (28), Expect = 9e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 317 acatacagaatgcctcgagggcgaggttcgtctgtgtcaacccaagagaagcctaatgct 376 |||| ||||||||||||||||||||| || ||||| ||||||| ||||| || || | | Sbjct: 198 acatgcagaatgcctcgagggcgaggctcttctgtcacaacccatgagaaacccaaagtt 257 Query: 377 gatgcagcagtc 388 |||| ||||||| Sbjct: 258 gatgaagcagtc 269
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 406 bits (205), Expect = e-109 Identities = 445/525 (84%) Strand = Plus / Minus Query: 1467 gcaagtacatggtggtctatccacagcgactagcaaccatgtttcacaactcaataatat 1526 ||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 26000914 gcaagtacatggtagtatatccacagcgacttacaaccatgtttcacaactcaataatat 26000855 Query: 1527 ttcagtcacttctgatatggggaacatcactgcttatgggtggacgtcctggtcttgtgt 1586 ||||||| ||||| || |||||||| ||| |||||||||||||||| ||||| ||||||| Sbjct: 26000854 ttcagtcccttcttatctggggaacttcattgcttatgggtggacggcctggccttgtgt 26000795 Query: 1587 ccttcggaatatcatgtttgagcattattttgacgctgatattttctactgtcttaccgg 1646 |||| ||||||||||||||| ||||| || | | | | || | |||| | |||| | | Sbjct: 26000794 cctttggaatatcatgtttgggcattgttcttatgttaatttcttctgttaccttatcag 26000735 Query: 1647 ttgtggtggcatttgttctgccacatatttgtccctttcctatttcatttgttgcaaatc 1706 ||||||| ||| ||| |||||||||||||||| |||||||| | |||||||||| | | Sbjct: 26000734 ttgtggttgcaattgctctgccacatatttgttcctttcctgtgacatttgttgcgcacc 26000675 Query: 1707 cgtggttagttgttggcttatttggttcacctgcactgcttggggcattcattggtcagc 1766 | |||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||| | Sbjct: 26000674 catggttagtagttgggttatttggttcacctgcactacttggggcattcatcggtcaac 26000615 Query: 1767 atattggatttattctcctgaagaggcacattcaacaagtgtattcaagaacaaagccag 1826 |||||||||| ||| | |||| ||||| || |||| || ||||| | ||||||| ||| Sbjct: 26000614 atattggattcattattttgaaaaggcatcttaaacatgtatattctataacaaagtcag 26000555 Query: 1827 gtctaactggtaacatgatggatatcatcgttggcctggaagctgagaggtggatttaca 1886 | ||| || ||||||| |||| || ||| ||||||||||||||||||||||| | Sbjct: 26000554 gactagctcataacatgctggaacaaattgttaacctggaagctgagaggtggattttta 26000495 Query: 1887 aatctggttttgtccaatggctcatagttttgatactcggaacctatttgaaggtcggag 1946 ||||||||||||| |||||||| |||||| ||||||| ||||| || |||||||| ||| Sbjct: 26000494 aatctggttttgtacaatggctaatagttctgatactgggaacatacttgaaggttggat 26000435 Query: 1947 catcctatatagcactcatctggcttgtttcgcctgcttttgcat 1991 |||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 26000434 catcttacatagcactcatctggcttgtttcgcctgcttttgcat 26000390 Score = 260 bits (131), Expect = 3e-65 Identities = 218/247 (88%) Strand = Plus / Minus Query: 633 agtatgtatatgcagaagcagagaaaatacagaagacagcccattgggacgttgatgttc 692 ||||||||||||||| |||||| |||||| |||||||||| |||||||| |||||||| | Sbjct: 26005591 agtatgtatatgcagtagcagataaaataaagaagacagctcattgggatgttgatgtcc 26005532 Query: 693 aactggagctgttccacacagatattggtgcaaatcgtctagctggtggccttttcaagg 752 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 26005531 aactggagctgttccacacagatattggtgcaaatcgtatggctggtggccttttcaatg 26005472 Query: 753 gaaaaacactcttgtactcagaccttaagcacgtggtcctcagaattgttcccaagtatt 812 ||||||| | |||| ||| |||||||||| ||| | || ||| ||||||||||||||| Sbjct: 26005471 gaaaaactatgctgtattcaaaccttaagcatgtgatactgagagttgttcccaagtatt 26005412 Query: 813 taccagaagctgaagaaaatttgatacttgtctcttctcatattgacacagtttccacaa 872 |||||||||| || || |||||||| ||||| ||||||||||| || ||||||||||| | Sbjct: 26005411 taccagaagccgaggacaatttgattcttgtttcttctcatatcgatacagtttccacga 26005352 Query: 873 cggaagg 879 || |||| Sbjct: 26005351 cgtaagg 26005345 Score = 198 bits (100), Expect = 9e-47 Identities = 142/156 (91%) Strand = Plus / Minus Query: 875 gaaggtgccggagactgcagttcatgtgtaggagtcatgctagagatggcacggggagtt 934 |||||||| ||||| || ||||||||||| ||||||||| ||||| | ||||| ||||| Sbjct: 26004646 gaaggtgctggagattgtagttcatgtgtgggagtcatgttagagcttgcacgaggagtg 26004587 Query: 935 gctcagtgggctcatgggtttaagagtggtgtcctgtttctgttcaacacaggggaagaa 994 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 26004586 gctcagtgggctcatgggtttaagagtggtgtcctgtttctattcaacacaggggaagaa 26004527 Query: 995 gagggccttgatggggcccacagttttataactcag 1030 || || |||||||| ||||| ||||||||||||||| Sbjct: 26004526 gaaggtcttgatggtgcccatagttttataactcag 26004491 Score = 184 bits (93), Expect = 1e-42 Identities = 171/197 (86%) Strand = Plus / Minus Query: 434 ttgctggggttgtttatacttttccttcatggatcctggtctgtttaccgtatgcagttt 493 |||||||| ||||| || | |||||||||||||||||||||||||| ||| | |||||| Sbjct: 26007107 ttgctgggattgttgatggtcttccttcatggatcctggtctgtttatcgttttcagttt 26007048 Query: 494 gcaaatcttcctttgccccttaatgctgagcaggctggtaagcgggggttctcagaggct 553 ||||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||| Sbjct: 26007047 gcaaatcttcctttgccccttgatgctgaacaggctggcaagcgtgggttctcagaggca 26006988 Query: 554 tctgcccttaagcatgtgaagtacttgacaagtctgggtcctcatccagttggttcagat 613 ||||| || ||||||| |||||| | || |||||||||||||||||||||||||| Sbjct: 26006987 tctgctctggagcatgttaagtaccttgcagccttgggtcctcatccagttggttcagat 26006928 Query: 614 gccctcgatcttgctgt 630 || ||||||||||||| Sbjct: 26006927 tccatcgatcttgctgt 26006911 Score = 159 bits (80), Expect = 8e-35 Identities = 287/356 (80%) Strand = Plus / Minus Query: 2372 gttgtgcatgttgttgatactacaagaatgaatgatggaaacacagaaccatcatcctac 2431 ||||||||||||||||| ||||||| ||||| ||| || |||||||||||||| || Sbjct: 25998804 gttgtgcatgttgttgacactacaacggtgaatagtggtaatacagaaccatcatcatat 25998745 Query: 2432 gtttccctgttctcgaacatgcctggaaagttgacacaggaattgatggacctcagaggg 2491 ||| | |||||||| || | ||||||||||||||| ||||||| | ||||| |||| Sbjct: 25998744 gttactctgttctccaatacacctggaaagttgacaaaggaattagtagaccttagagat 25998685 Query: 2492 gaagagttttcttgcggaaggaatatgacaactgatttcgtgacatttaccgtgaagtat 2551 ||||| |||||||| || ||||||| | | | |||||| || ||||||||| |||| ||| Sbjct: 25998684 gaagaattttcttgtgggaggaatagggctattgattttgttacatttaccatgaaatat 25998625 Query: 2552 ggctgcaggagttacaaagcgagcaacactggatggagcaaatcagaagttccagtgctc 2611 ||||| ||||||| ||| || ||| ||||||||||||||||||||||| ||||||||| Sbjct: 25998624 ggctgtttgagttacgaagggaccaatactggatggagcaaatcagaagtgccagtgctc 25998565 Query: 2612 catgtcgaaagtgattctgctgatgatgatggccgtagaacagtagtatcagttgatacc 2671 | | |||||||||||| | |||||| || |||| || ||||||||||||| Sbjct: 25998564 agtttgaaaagtgattctgttaccaatgatgctcgacaaacaataatatcagttgatact 25998505 Query: 2672 aggtcatctacacgatggtcgctcgcaatcaatatgcaggaaattgacgacttcac 2727 | ||||||||| || ||||| || |||||||||| || |||||||| |||||||| Sbjct: 25998504 aagtcatctacgcgttggtcactggcaatcaataaacaagaaattgatgacttcac 25998449 Score = 147 bits (74), Expect = 3e-31 Identities = 101/110 (91%) Strand = Plus / Minus Query: 1299 agaatgacaaaatggagctcctgcaaccaggatcccttcagcataatggagaaaatatgc 1358 |||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||||| Sbjct: 26001267 agaatgacaaaatgaagcatctgaaaccaggatcccttcagcatattggagaaaatatgc 26001208 Query: 1359 ttgccttcctactccatgctgcttcatcaccaaaatttatgaaagatgca 1408 |||| |||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 26001207 ttgctttcctacttcatgctgccgcatcaccaaaatttatgaaagatgca 26001158 Score = 135 bits (68), Expect = 1e-27 Identities = 95/104 (91%) Strand = Plus / Minus Query: 1193 tctggagcaataaaatctgctactgatttccaaatatatgaggaggttgctggtcttcct 1252 ||||||||||||||||||||||||||||| ||||||||| |||| |||| |||||||||| Sbjct: 26002577 tctggagcaataaaatctgctactgattttcaaatatatcaggaagttggtggtcttcct 26002518 Query: 1253 ggccttgattttgcatatacagatacgacatccgtgtatcacac 1296 || ||||||||||| |||||||||| |||||| || |||||||| Sbjct: 26002517 ggtcttgattttgcttatacagataggacatcagtctatcacac 26002474 Score = 129 bits (65), Expect = 7e-26 Identities = 140/165 (84%) Strand = Plus / Minus Query: 1985 tttgcatatggtcttatggaagcaacactgactcctgtaaggtcacctaaacagcttaag 2044 |||||| | |||||||||||||||||||| |||||| |||||||||||||||| ||| Sbjct: 26000318 tttgcagacggtcttatggaagcaacactatctcctgctcggtcacctaaacagctcaag 26000259 Query: 2045 gtctttacattggtcctggctttggctgtgccagttatgtcatctgctggtttgtttatt 2104 || |||||||||| ||||| ||||||| |||||| | |||||||||||||| ||||| Sbjct: 26000258 gttattacattggttctggcattggctgcaccagttgtctcatctgctggtttagttatt 26000199 Query: 2105 cgcatggtagatgtgatggttggcagtattgtacgtgttgatagg 2149 |||||||| ||||| || |||| ||||||||||| |||||||| Sbjct: 26000198 cgcatggttgatgttataattgggagtattgtacgcattgatagg 26000154 Score = 109 bits (55), Expect = 7e-20 Identities = 121/143 (84%) Strand = Plus / Minus Query: 2907 taaaactaagaacagacgtgaatagggtcacgccgatggtcgagacggttctcgagaagc 2966 ||||||||||||| || |||||||| || || |||| ||| | | |||||||||||||| Sbjct: 25997878 taaaactaagaacggatgtgaatagagttacaccgaaggttggcagggttctcgagaagc 25997819 Query: 2967 ttccacgctggtgtgcgcccttcggcaagtcgacatctccttacacgctggcgttcctga 3026 ||||| | |||||||| ||||| |||||||| || |||||||| || |||| ||| ||| Sbjct: 25997818 ttccaggatggtgtgcaccctttggcaagtctacttctccttatacattggctttcttga 25997759 Query: 3027 ccgctcttccagtcaatatttag 3049 |||||||||| |||||||||||| Sbjct: 25997758 ccgctcttcctgtcaatatttag 25997736 Score = 95.6 bits (48), Expect = 1e-15 Identities = 63/68 (92%) Strand = Plus / Minus Query: 1028 cagcaccactggagaaactcagtacgttttgctgtcgatttggaagctatgggtatcagt 1087 ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 26003502 cagcaccgctggagaaattcagtacgttttgcaatcgatttggaagctatgggtatcagc 26003443 Query: 1088 gggaaatc 1095 |||||||| Sbjct: 26003442 gggaaatc 26003435 Score = 91.7 bits (46), Expect = 2e-14 Identities = 97/114 (85%) Strand = Plus / Minus Query: 2147 aggaaccctggtgggctaccagactggcttggaaatgtagtagttgctgttgccatcgct 2206 |||||||||||||| |||||||| |||||||| ||||||||||| |||||||||| ||| Sbjct: 25999991 aggaaccctggtggcctaccagattggcttggcaatgtagtagtctctgttgccattgct 25999932 Query: 2207 atagtcgtgtccttgacgtttgtgtatcttctttcgtatgtccatatttcaggt 2260 || ||| | | || || ||||||||||||||||| || || ||||| |||||| Sbjct: 25999931 attgtcatatgttttacctttgtgtatcttctttcttacgttcatatatcaggt 25999878 Score = 81.8 bits (41), Expect = 2e-11 Identities = 68/77 (88%) Strand = Plus / Minus Query: 2297 tttggtcttgcccttgtactagtatcaagtggcattgttccagcattcacagaggatatt 2356 ||||||||||| |||| ||| || |||||||||||| | || |||||||| ||||||||| Sbjct: 25999637 tttggtcttgcacttgcactggtgtcaagtggcattctccctgcattcacggaggatatt 25999578 Query: 2357 gctcgttctgtaaatgt 2373 ||||| ||||||||||| Sbjct: 25999577 gctcggtctgtaaatgt 25999561 Score = 69.9 bits (35), Expect = 6e-08 Identities = 92/111 (82%) Strand = Plus / Minus Query: 2750 ttggttcaactgggtggtaagactgaggtcggtggatggcatacaatccagtttgcaggc 2809 ||||||| ||||||| ||||| ||| ||| ||| |||||||||||||||||||| || Sbjct: 25998041 ttggttccactgggtaataagagcgagatcgatgggtggcatacaatccagtttgctggt 25997982 Query: 2810 ggcaagaacgcgccaacgaaattccagttagcccttttctggtcaagtaat 2860 || ||| || | ||||| ||||| ||| || ||||||||||| |||||||| Sbjct: 25997981 ggtaaggactcaccaacaaaatttcagctaacccttttctgggcaagtaat 25997931 Score = 56.0 bits (28), Expect = 9e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 317 acatacagaatgcctcgagggcgaggttcgtctgtgtcaacccaagagaagcctaatgct 376 |||| ||||||||||||||||||||| || ||||| ||||||| ||||| || || | | Sbjct: 26007224 acatgcagaatgcctcgagggcgaggctcttctgtcacaacccatgagaaacccaaagtt 26007165 Query: 377 gatgcagcagtc 388 |||| ||||||| Sbjct: 26007164 gatgaagcagtc 26007153
>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 406 bits (205), Expect = e-109 Identities = 445/525 (84%) Strand = Plus / Minus Query: 1467 gcaagtacatggtggtctatccacagcgactagcaaccatgtttcacaactcaataatat 1526 ||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 35241 gcaagtacatggtagtatatccacagcgacttacaaccatgtttcacaactcaataatat 35182 Query: 1527 ttcagtcacttctgatatggggaacatcactgcttatgggtggacgtcctggtcttgtgt 1586 ||||||| ||||| || |||||||| ||| |||||||||||||||| ||||| ||||||| Sbjct: 35181 ttcagtcccttcttatctggggaacttcattgcttatgggtggacggcctggccttgtgt 35122 Query: 1587 ccttcggaatatcatgtttgagcattattttgacgctgatattttctactgtcttaccgg 1646 |||| ||||||||||||||| ||||| || | | | | || | |||| | |||| | | Sbjct: 35121 cctttggaatatcatgtttgggcattgttcttatgttaatttcttctgttaccttatcag 35062 Query: 1647 ttgtggtggcatttgttctgccacatatttgtccctttcctatttcatttgttgcaaatc 1706 ||||||| ||| ||| |||||||||||||||| |||||||| | |||||||||| | | Sbjct: 35061 ttgtggttgcaattgctctgccacatatttgttcctttcctgtgacatttgttgcgcacc 35002 Query: 1707 cgtggttagttgttggcttatttggttcacctgcactgcttggggcattcattggtcagc 1766 | |||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||| | Sbjct: 35001 catggttagtagttgggttatttggttcacctgcactacttggggcattcatcggtcaac 34942 Query: 1767 atattggatttattctcctgaagaggcacattcaacaagtgtattcaagaacaaagccag 1826 |||||||||| ||| | |||| ||||| || |||| || ||||| | ||||||| ||| Sbjct: 34941 atattggattcattattttgaaaaggcatcttaaacatgtatattctataacaaagtcag 34882 Query: 1827 gtctaactggtaacatgatggatatcatcgttggcctggaagctgagaggtggatttaca 1886 | ||| || ||||||| |||| || ||| ||||||||||||||||||||||| | Sbjct: 34881 gactagctcataacatgctggaacaaattgttaacctggaagctgagaggtggattttta 34822 Query: 1887 aatctggttttgtccaatggctcatagttttgatactcggaacctatttgaaggtcggag 1946 ||||||||||||| |||||||| |||||| ||||||| ||||| || |||||||| ||| Sbjct: 34821 aatctggttttgtacaatggctaatagttctgatactgggaacatacttgaaggttggat 34762 Query: 1947 catcctatatagcactcatctggcttgtttcgcctgcttttgcat 1991 |||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 34761 catcttacatagcactcatctggcttgtttcgcctgcttttgcat 34717 Score = 260 bits (131), Expect = 3e-65 Identities = 218/247 (88%) Strand = Plus / Minus Query: 633 agtatgtatatgcagaagcagagaaaatacagaagacagcccattgggacgttgatgttc 692 ||||||||||||||| |||||| |||||| |||||||||| |||||||| |||||||| | Sbjct: 39918 agtatgtatatgcagtagcagataaaataaagaagacagctcattgggatgttgatgtcc 39859 Query: 693 aactggagctgttccacacagatattggtgcaaatcgtctagctggtggccttttcaagg 752 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 39858 aactggagctgttccacacagatattggtgcaaatcgtatggctggtggccttttcaatg 39799 Query: 753 gaaaaacactcttgtactcagaccttaagcacgtggtcctcagaattgttcccaagtatt 812 ||||||| | |||| ||| |||||||||| ||| | || ||| ||||||||||||||| Sbjct: 39798 gaaaaactatgctgtattcaaaccttaagcatgtgatactgagagttgttcccaagtatt 39739 Query: 813 taccagaagctgaagaaaatttgatacttgtctcttctcatattgacacagtttccacaa 872 |||||||||| || || |||||||| ||||| ||||||||||| || ||||||||||| | Sbjct: 39738 taccagaagccgaggacaatttgattcttgtttcttctcatatcgatacagtttccacga 39679 Query: 873 cggaagg 879 || |||| Sbjct: 39678 cgtaagg 39672 Score = 198 bits (100), Expect = 9e-47 Identities = 142/156 (91%) Strand = Plus / Minus Query: 875 gaaggtgccggagactgcagttcatgtgtaggagtcatgctagagatggcacggggagtt 934 |||||||| ||||| || ||||||||||| ||||||||| ||||| | ||||| ||||| Sbjct: 38973 gaaggtgctggagattgtagttcatgtgtgggagtcatgttagagcttgcacgaggagtg 38914 Query: 935 gctcagtgggctcatgggtttaagagtggtgtcctgtttctgttcaacacaggggaagaa 994 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 38913 gctcagtgggctcatgggtttaagagtggtgtcctgtttctattcaacacaggggaagaa 38854 Query: 995 gagggccttgatggggcccacagttttataactcag 1030 || || |||||||| ||||| ||||||||||||||| Sbjct: 38853 gaaggtcttgatggtgcccatagttttataactcag 38818 Score = 184 bits (93), Expect = 1e-42 Identities = 171/197 (86%) Strand = Plus / Minus Query: 434 ttgctggggttgtttatacttttccttcatggatcctggtctgtttaccgtatgcagttt 493 |||||||| ||||| || | |||||||||||||||||||||||||| ||| | |||||| Sbjct: 41434 ttgctgggattgttgatggtcttccttcatggatcctggtctgtttatcgttttcagttt 41375 Query: 494 gcaaatcttcctttgccccttaatgctgagcaggctggtaagcgggggttctcagaggct 553 ||||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||| Sbjct: 41374 gcaaatcttcctttgccccttgatgctgaacaggctggcaagcgtgggttctcagaggca 41315 Query: 554 tctgcccttaagcatgtgaagtacttgacaagtctgggtcctcatccagttggttcagat 613 ||||| || ||||||| |||||| | || |||||||||||||||||||||||||| Sbjct: 41314 tctgctctggagcatgttaagtaccttgcagccttgggtcctcatccagttggttcagat 41255 Query: 614 gccctcgatcttgctgt 630 || ||||||||||||| Sbjct: 41254 tccatcgatcttgctgt 41238 Score = 159 bits (80), Expect = 8e-35 Identities = 287/356 (80%) Strand = Plus / Minus Query: 2372 gttgtgcatgttgttgatactacaagaatgaatgatggaaacacagaaccatcatcctac 2431 ||||||||||||||||| ||||||| ||||| ||| || |||||||||||||| || Sbjct: 33131 gttgtgcatgttgttgacactacaacggtgaatagtggtaatacagaaccatcatcatat 33072 Query: 2432 gtttccctgttctcgaacatgcctggaaagttgacacaggaattgatggacctcagaggg 2491 ||| | |||||||| || | ||||||||||||||| ||||||| | ||||| |||| Sbjct: 33071 gttactctgttctccaatacacctggaaagttgacaaaggaattagtagaccttagagat 33012 Query: 2492 gaagagttttcttgcggaaggaatatgacaactgatttcgtgacatttaccgtgaagtat 2551 ||||| |||||||| || ||||||| | | | |||||| || ||||||||| |||| ||| Sbjct: 33011 gaagaattttcttgtgggaggaatagggctattgattttgttacatttaccatgaaatat 32952 Query: 2552 ggctgcaggagttacaaagcgagcaacactggatggagcaaatcagaagttccagtgctc 2611 ||||| ||||||| ||| || ||| ||||||||||||||||||||||| ||||||||| Sbjct: 32951 ggctgtttgagttacgaagggaccaatactggatggagcaaatcagaagtgccagtgctc 32892 Query: 2612 catgtcgaaagtgattctgctgatgatgatggccgtagaacagtagtatcagttgatacc 2671 | | |||||||||||| | |||||| || |||| || ||||||||||||| Sbjct: 32891 agtttgaaaagtgattctgttaccaatgatgctcgacaaacaataatatcagttgatact 32832 Query: 2672 aggtcatctacacgatggtcgctcgcaatcaatatgcaggaaattgacgacttcac 2727 | ||||||||| || ||||| || |||||||||| || |||||||| |||||||| Sbjct: 32831 aagtcatctacgcgttggtcactggcaatcaataaacaagaaattgatgacttcac 32776 Score = 147 bits (74), Expect = 3e-31 Identities = 101/110 (91%) Strand = Plus / Minus Query: 1299 agaatgacaaaatggagctcctgcaaccaggatcccttcagcataatggagaaaatatgc 1358 |||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||||| Sbjct: 35594 agaatgacaaaatgaagcatctgaaaccaggatcccttcagcatattggagaaaatatgc 35535 Query: 1359 ttgccttcctactccatgctgcttcatcaccaaaatttatgaaagatgca 1408 |||| |||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 35534 ttgctttcctacttcatgctgccgcatcaccaaaatttatgaaagatgca 35485 Score = 135 bits (68), Expect = 1e-27 Identities = 95/104 (91%) Strand = Plus / Minus Query: 1193 tctggagcaataaaatctgctactgatttccaaatatatgaggaggttgctggtcttcct 1252 ||||||||||||||||||||||||||||| ||||||||| |||| |||| |||||||||| Sbjct: 36904 tctggagcaataaaatctgctactgattttcaaatatatcaggaagttggtggtcttcct 36845 Query: 1253 ggccttgattttgcatatacagatacgacatccgtgtatcacac 1296 || ||||||||||| |||||||||| |||||| || |||||||| Sbjct: 36844 ggtcttgattttgcttatacagataggacatcagtctatcacac 36801 Score = 129 bits (65), Expect = 7e-26 Identities = 140/165 (84%) Strand = Plus / Minus Query: 1985 tttgcatatggtcttatggaagcaacactgactcctgtaaggtcacctaaacagcttaag 2044 |||||| | |||||||||||||||||||| |||||| |||||||||||||||| ||| Sbjct: 34645 tttgcagacggtcttatggaagcaacactatctcctgctcggtcacctaaacagctcaag 34586 Query: 2045 gtctttacattggtcctggctttggctgtgccagttatgtcatctgctggtttgtttatt 2104 || |||||||||| ||||| ||||||| |||||| | |||||||||||||| ||||| Sbjct: 34585 gttattacattggttctggcattggctgcaccagttgtctcatctgctggtttagttatt 34526 Query: 2105 cgcatggtagatgtgatggttggcagtattgtacgtgttgatagg 2149 |||||||| ||||| || |||| ||||||||||| |||||||| Sbjct: 34525 cgcatggttgatgttataattgggagtattgtacgcattgatagg 34481 Score = 109 bits (55), Expect = 7e-20 Identities = 121/143 (84%) Strand = Plus / Minus Query: 2907 taaaactaagaacagacgtgaatagggtcacgccgatggtcgagacggttctcgagaagc 2966 ||||||||||||| || |||||||| || || |||| ||| | | |||||||||||||| Sbjct: 32205 taaaactaagaacggatgtgaatagagttacaccgaaggttggcagggttctcgagaagc 32146 Query: 2967 ttccacgctggtgtgcgcccttcggcaagtcgacatctccttacacgctggcgttcctga 3026 ||||| | |||||||| ||||| |||||||| || |||||||| || |||| ||| ||| Sbjct: 32145 ttccaggatggtgtgcaccctttggcaagtctacttctccttatacattggctttcttga 32086 Query: 3027 ccgctcttccagtcaatatttag 3049 |||||||||| |||||||||||| Sbjct: 32085 ccgctcttcctgtcaatatttag 32063 Score = 95.6 bits (48), Expect = 1e-15 Identities = 63/68 (92%) Strand = Plus / Minus Query: 1028 cagcaccactggagaaactcagtacgttttgctgtcgatttggaagctatgggtatcagt 1087 ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 37829 cagcaccgctggagaaattcagtacgttttgcaatcgatttggaagctatgggtatcagc 37770 Query: 1088 gggaaatc 1095 |||||||| Sbjct: 37769 gggaaatc 37762 Score = 91.7 bits (46), Expect = 2e-14 Identities = 97/114 (85%) Strand = Plus / Minus Query: 2147 aggaaccctggtgggctaccagactggcttggaaatgtagtagttgctgttgccatcgct 2206 |||||||||||||| |||||||| |||||||| ||||||||||| |||||||||| ||| Sbjct: 34318 aggaaccctggtggcctaccagattggcttggcaatgtagtagtctctgttgccattgct 34259 Query: 2207 atagtcgtgtccttgacgtttgtgtatcttctttcgtatgtccatatttcaggt 2260 || ||| | | || || ||||||||||||||||| || || ||||| |||||| Sbjct: 34258 attgtcatatgttttacctttgtgtatcttctttcttacgttcatatatcaggt 34205 Score = 81.8 bits (41), Expect = 2e-11 Identities = 68/77 (88%) Strand = Plus / Minus Query: 2297 tttggtcttgcccttgtactagtatcaagtggcattgttccagcattcacagaggatatt 2356 ||||||||||| |||| ||| || |||||||||||| | || |||||||| ||||||||| Sbjct: 33964 tttggtcttgcacttgcactggtgtcaagtggcattctccctgcattcacggaggatatt 33905 Query: 2357 gctcgttctgtaaatgt 2373 ||||| ||||||||||| Sbjct: 33904 gctcggtctgtaaatgt 33888 Score = 69.9 bits (35), Expect = 6e-08 Identities = 92/111 (82%) Strand = Plus / Minus Query: 2750 ttggttcaactgggtggtaagactgaggtcggtggatggcatacaatccagtttgcaggc 2809 ||||||| ||||||| ||||| ||| ||| ||| |||||||||||||||||||| || Sbjct: 32368 ttggttccactgggtaataagagcgagatcgatgggtggcatacaatccagtttgctggt 32309 Query: 2810 ggcaagaacgcgccaacgaaattccagttagcccttttctggtcaagtaat 2860 || ||| || | ||||| ||||| ||| || ||||||||||| |||||||| Sbjct: 32308 ggtaaggactcaccaacaaaatttcagctaacccttttctgggcaagtaat 32258 Score = 56.0 bits (28), Expect = 9e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 317 acatacagaatgcctcgagggcgaggttcgtctgtgtcaacccaagagaagcctaatgct 376 |||| ||||||||||||||||||||| || ||||| ||||||| ||||| || || | | Sbjct: 41551 acatgcagaatgcctcgagggcgaggctcttctgtcacaacccatgagaaacccaaagtt 41492 Query: 377 gatgcagcagtc 388 |||| ||||||| Sbjct: 41491 gatgaagcagtc 41480
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 406 bits (205), Expect = e-109 Identities = 445/525 (84%) Strand = Plus / Minus Query: 1467 gcaagtacatggtggtctatccacagcgactagcaaccatgtttcacaactcaataatat 1526 ||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 127176 gcaagtacatggtagtatatccacagcgacttacaaccatgtttcacaactcaataatat 127117 Query: 1527 ttcagtcacttctgatatggggaacatcactgcttatgggtggacgtcctggtcttgtgt 1586 ||||||| ||||| || |||||||| ||| |||||||||||||||| ||||| ||||||| Sbjct: 127116 ttcagtcccttcttatctggggaacttcattgcttatgggtggacggcctggccttgtgt 127057 Query: 1587 ccttcggaatatcatgtttgagcattattttgacgctgatattttctactgtcttaccgg 1646 |||| ||||||||||||||| ||||| || | | | | || | |||| | |||| | | Sbjct: 127056 cctttggaatatcatgtttgggcattgttcttatgttaatttcttctgttaccttatcag 126997 Query: 1647 ttgtggtggcatttgttctgccacatatttgtccctttcctatttcatttgttgcaaatc 1706 ||||||| ||| ||| |||||||||||||||| |||||||| | |||||||||| | | Sbjct: 126996 ttgtggttgcaattgctctgccacatatttgttcctttcctgtgacatttgttgcgcacc 126937 Query: 1707 cgtggttagttgttggcttatttggttcacctgcactgcttggggcattcattggtcagc 1766 | |||||||| ||||| |||||||||||||||||||| |||||||||||||| ||||| | Sbjct: 126936 catggttagtagttgggttatttggttcacctgcactacttggggcattcatcggtcaac 126877 Query: 1767 atattggatttattctcctgaagaggcacattcaacaagtgtattcaagaacaaagccag 1826 |||||||||| ||| | |||| ||||| || |||| || ||||| | ||||||| ||| Sbjct: 126876 atattggattcattattttgaaaaggcatcttaaacatgtatattctataacaaagtcag 126817 Query: 1827 gtctaactggtaacatgatggatatcatcgttggcctggaagctgagaggtggatttaca 1886 | ||| || ||||||| |||| || ||| ||||||||||||||||||||||| | Sbjct: 126816 gactagctcataacatgctggaacaaattgttaacctggaagctgagaggtggattttta 126757 Query: 1887 aatctggttttgtccaatggctcatagttttgatactcggaacctatttgaaggtcggag 1946 ||||||||||||| |||||||| |||||| ||||||| ||||| || |||||||| ||| Sbjct: 126756 aatctggttttgtacaatggctaatagttctgatactgggaacatacttgaaggttggat 126697 Query: 1947 catcctatatagcactcatctggcttgtttcgcctgcttttgcat 1991 |||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 126696 catcttacatagcactcatctggcttgtttcgcctgcttttgcat 126652 Score = 260 bits (131), Expect = 3e-65 Identities = 218/247 (88%) Strand = Plus / Minus Query: 633 agtatgtatatgcagaagcagagaaaatacagaagacagcccattgggacgttgatgttc 692 ||||||||||||||| |||||| |||||| |||||||||| |||||||| |||||||| | Sbjct: 131853 agtatgtatatgcagtagcagataaaataaagaagacagctcattgggatgttgatgtcc 131794 Query: 693 aactggagctgttccacacagatattggtgcaaatcgtctagctggtggccttttcaagg 752 |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 131793 aactggagctgttccacacagatattggtgcaaatcgtatggctggtggccttttcaatg 131734 Query: 753 gaaaaacactcttgtactcagaccttaagcacgtggtcctcagaattgttcccaagtatt 812 ||||||| | |||| ||| |||||||||| ||| | || ||| ||||||||||||||| Sbjct: 131733 gaaaaactatgctgtattcaaaccttaagcatgtgatactgagagttgttcccaagtatt 131674 Query: 813 taccagaagctgaagaaaatttgatacttgtctcttctcatattgacacagtttccacaa 872 |||||||||| || || |||||||| ||||| ||||||||||| || ||||||||||| | Sbjct: 131673 taccagaagccgaggacaatttgattcttgtttcttctcatatcgatacagtttccacga 131614 Query: 873 cggaagg 879 || |||| Sbjct: 131613 cgtaagg 131607 Score = 198 bits (100), Expect = 9e-47 Identities = 142/156 (91%) Strand = Plus / Minus Query: 875 gaaggtgccggagactgcagttcatgtgtaggagtcatgctagagatggcacggggagtt 934 |||||||| ||||| || ||||||||||| ||||||||| ||||| | ||||| ||||| Sbjct: 130908 gaaggtgctggagattgtagttcatgtgtgggagtcatgttagagcttgcacgaggagtg 130849 Query: 935 gctcagtgggctcatgggtttaagagtggtgtcctgtttctgttcaacacaggggaagaa 994 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 130848 gctcagtgggctcatgggtttaagagtggtgtcctgtttctattcaacacaggggaagaa 130789 Query: 995 gagggccttgatggggcccacagttttataactcag 1030 || || |||||||| ||||| ||||||||||||||| Sbjct: 130788 gaaggtcttgatggtgcccatagttttataactcag 130753 Score = 184 bits (93), Expect = 1e-42 Identities = 171/197 (86%) Strand = Plus / Minus Query: 434 ttgctggggttgtttatacttttccttcatggatcctggtctgtttaccgtatgcagttt 493 |||||||| ||||| || | |||||||||||||||||||||||||| ||| | |||||| Sbjct: 133369 ttgctgggattgttgatggtcttccttcatggatcctggtctgtttatcgttttcagttt 133310 Query: 494 gcaaatcttcctttgccccttaatgctgagcaggctggtaagcgggggttctcagaggct 553 ||||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||| Sbjct: 133309 gcaaatcttcctttgccccttgatgctgaacaggctggcaagcgtgggttctcagaggca 133250 Query: 554 tctgcccttaagcatgtgaagtacttgacaagtctgggtcctcatccagttggttcagat 613 ||||| || ||||||| |||||| | || |||||||||||||||||||||||||| Sbjct: 133249 tctgctctggagcatgttaagtaccttgcagccttgggtcctcatccagttggttcagat 133190 Query: 614 gccctcgatcttgctgt 630 || ||||||||||||| Sbjct: 133189 tccatcgatcttgctgt 133173 Score = 159 bits (80), Expect = 8e-35 Identities = 287/356 (80%) Strand = Plus / Minus Query: 2372 gttgtgcatgttgttgatactacaagaatgaatgatggaaacacagaaccatcatcctac 2431 ||||||||||||||||| ||||||| ||||| ||| || |||||||||||||| || Sbjct: 125066 gttgtgcatgttgttgacactacaacggtgaatagtggtaatacagaaccatcatcatat 125007 Query: 2432 gtttccctgttctcgaacatgcctggaaagttgacacaggaattgatggacctcagaggg 2491 ||| | |||||||| || | ||||||||||||||| ||||||| | ||||| |||| Sbjct: 125006 gttactctgttctccaatacacctggaaagttgacaaaggaattagtagaccttagagat 124947 Query: 2492 gaagagttttcttgcggaaggaatatgacaactgatttcgtgacatttaccgtgaagtat 2551 ||||| |||||||| || ||||||| | | | |||||| || ||||||||| |||| ||| Sbjct: 124946 gaagaattttcttgtgggaggaatagggctattgattttgttacatttaccatgaaatat 124887 Query: 2552 ggctgcaggagttacaaagcgagcaacactggatggagcaaatcagaagttccagtgctc 2611 ||||| ||||||| ||| || ||| ||||||||||||||||||||||| ||||||||| Sbjct: 124886 ggctgtttgagttacgaagggaccaatactggatggagcaaatcagaagtgccagtgctc 124827 Query: 2612 catgtcgaaagtgattctgctgatgatgatggccgtagaacagtagtatcagttgatacc 2671 | | |||||||||||| | |||||| || |||| || ||||||||||||| Sbjct: 124826 agtttgaaaagtgattctgttaccaatgatgctcgacaaacaataatatcagttgatact 124767 Query: 2672 aggtcatctacacgatggtcgctcgcaatcaatatgcaggaaattgacgacttcac 2727 | ||||||||| || ||||| || |||||||||| || |||||||| |||||||| Sbjct: 124766 aagtcatctacgcgttggtcactggcaatcaataaacaagaaattgatgacttcac 124711 Score = 147 bits (74), Expect = 3e-31 Identities = 101/110 (91%) Strand = Plus / Minus Query: 1299 agaatgacaaaatggagctcctgcaaccaggatcccttcagcataatggagaaaatatgc 1358 |||||||||||||| ||| ||| ||||||||||||||||||||| |||||||||||||| Sbjct: 127529 agaatgacaaaatgaagcatctgaaaccaggatcccttcagcatattggagaaaatatgc 127470 Query: 1359 ttgccttcctactccatgctgcttcatcaccaaaatttatgaaagatgca 1408 |||| |||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 127469 ttgctttcctacttcatgctgccgcatcaccaaaatttatgaaagatgca 127420 Score = 135 bits (68), Expect = 1e-27 Identities = 95/104 (91%) Strand = Plus / Minus Query: 1193 tctggagcaataaaatctgctactgatttccaaatatatgaggaggttgctggtcttcct 1252 ||||||||||||||||||||||||||||| ||||||||| |||| |||| |||||||||| Sbjct: 128839 tctggagcaataaaatctgctactgattttcaaatatatcaggaagttggtggtcttcct 128780 Query: 1253 ggccttgattttgcatatacagatacgacatccgtgtatcacac 1296 || ||||||||||| |||||||||| |||||| || |||||||| Sbjct: 128779 ggtcttgattttgcttatacagataggacatcagtctatcacac 128736 Score = 129 bits (65), Expect = 7e-26 Identities = 140/165 (84%) Strand = Plus / Minus Query: 1985 tttgcatatggtcttatggaagcaacactgactcctgtaaggtcacctaaacagcttaag 2044 |||||| | |||||||||||||||||||| |||||| |||||||||||||||| ||| Sbjct: 126580 tttgcagacggtcttatggaagcaacactatctcctgctcggtcacctaaacagctcaag 126521 Query: 2045 gtctttacattggtcctggctttggctgtgccagttatgtcatctgctggtttgtttatt 2104 || |||||||||| ||||| ||||||| |||||| | |||||||||||||| ||||| Sbjct: 126520 gttattacattggttctggcattggctgcaccagttgtctcatctgctggtttagttatt 126461 Query: 2105 cgcatggtagatgtgatggttggcagtattgtacgtgttgatagg 2149 |||||||| ||||| || |||| ||||||||||| |||||||| Sbjct: 126460 cgcatggttgatgttataattgggagtattgtacgcattgatagg 126416 Score = 109 bits (55), Expect = 7e-20 Identities = 121/143 (84%) Strand = Plus / Minus Query: 2907 taaaactaagaacagacgtgaatagggtcacgccgatggtcgagacggttctcgagaagc 2966 ||||||||||||| || |||||||| || || |||| ||| | | |||||||||||||| Sbjct: 124140 taaaactaagaacggatgtgaatagagttacaccgaaggttggcagggttctcgagaagc 124081 Query: 2967 ttccacgctggtgtgcgcccttcggcaagtcgacatctccttacacgctggcgttcctga 3026 ||||| | |||||||| ||||| |||||||| || |||||||| || |||| ||| ||| Sbjct: 124080 ttccaggatggtgtgcaccctttggcaagtctacttctccttatacattggctttcttga 124021 Query: 3027 ccgctcttccagtcaatatttag 3049 |||||||||| |||||||||||| Sbjct: 124020 ccgctcttcctgtcaatatttag 123998 Score = 95.6 bits (48), Expect = 1e-15 Identities = 63/68 (92%) Strand = Plus / Minus Query: 1028 cagcaccactggagaaactcagtacgttttgctgtcgatttggaagctatgggtatcagt 1087 ||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 129764 cagcaccgctggagaaattcagtacgttttgcaatcgatttggaagctatgggtatcagc 129705 Query: 1088 gggaaatc 1095 |||||||| Sbjct: 129704 gggaaatc 129697 Score = 91.7 bits (46), Expect = 2e-14 Identities = 97/114 (85%) Strand = Plus / Minus Query: 2147 aggaaccctggtgggctaccagactggcttggaaatgtagtagttgctgttgccatcgct 2206 |||||||||||||| |||||||| |||||||| ||||||||||| |||||||||| ||| Sbjct: 126253 aggaaccctggtggcctaccagattggcttggcaatgtagtagtctctgttgccattgct 126194 Query: 2207 atagtcgtgtccttgacgtttgtgtatcttctttcgtatgtccatatttcaggt 2260 || ||| | | || || ||||||||||||||||| || || ||||| |||||| Sbjct: 126193 attgtcatatgttttacctttgtgtatcttctttcttacgttcatatatcaggt 126140 Score = 81.8 bits (41), Expect = 2e-11 Identities = 68/77 (88%) Strand = Plus / Minus Query: 2297 tttggtcttgcccttgtactagtatcaagtggcattgttccagcattcacagaggatatt 2356 ||||||||||| |||| ||| || |||||||||||| | || |||||||| ||||||||| Sbjct: 125899 tttggtcttgcacttgcactggtgtcaagtggcattctccctgcattcacggaggatatt 125840 Query: 2357 gctcgttctgtaaatgt 2373 ||||| ||||||||||| Sbjct: 125839 gctcggtctgtaaatgt 125823 Score = 69.9 bits (35), Expect = 6e-08 Identities = 92/111 (82%) Strand = Plus / Minus Query: 2750 ttggttcaactgggtggtaagactgaggtcggtggatggcatacaatccagtttgcaggc 2809 ||||||| ||||||| ||||| ||| ||| ||| |||||||||||||||||||| || Sbjct: 124303 ttggttccactgggtaataagagcgagatcgatgggtggcatacaatccagtttgctggt 124244 Query: 2810 ggcaagaacgcgccaacgaaattccagttagcccttttctggtcaagtaat 2860 || ||| || | ||||| ||||| ||| || ||||||||||| |||||||| Sbjct: 124243 ggtaaggactcaccaacaaaatttcagctaacccttttctgggcaagtaat 124193 Score = 56.0 bits (28), Expect = 9e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 317 acatacagaatgcctcgagggcgaggttcgtctgtgtcaacccaagagaagcctaatgct 376 |||| ||||||||||||||||||||| || ||||| ||||||| ||||| || || | | Sbjct: 133486 acatgcagaatgcctcgagggcgaggctcttctgtcacaacccatgagaaacccaaagtt 133427 Query: 377 gatgcagcagtc 388 |||| ||||||| Sbjct: 133426 gatgaagcagtc 133415
>ref|NM_001059866.1| Oryza sativa (japonica cultivar-group) Os04g0519900 (Os04g0519900) mRNA, partial cds Length = 940 Score = 188 bits (95), Expect = 9e-44 Identities = 359/447 (80%) Strand = Plus / Plus Query: 2414 acagaaccatcatcctacgtttccctgttctcgaacatgcctggaaagttgacacaggaa 2473 |||||||||||||| || ||| | |||||||| || | ||||||||||||||| ||||| Sbjct: 14 acagaaccatcatcatatgttactctgttctccaatacacctggaaagttgacaaaggaa 73 Query: 2474 ttgatggacctcagaggggaagagttttcttgcggaaggaatatgacaactgatttcgtg 2533 || | ||||| |||| ||||| |||||||| || ||||||| | | | |||||| || Sbjct: 74 ttagtagaccttagagatgaagaattttcttgtgggaggaatagggctattgattttgtt 133 Query: 2534 acatttaccgtgaagtatggctgcaggagttacaaagcgagcaacactggatggagcaaa 2593 ||||||||| |||| |||||||| ||||||| ||| || ||| ||||||||||||||| Sbjct: 134 acatttaccatgaaatatggctgtttgagttacgaagggaccaatactggatggagcaaa 193 Query: 2594 tcagaagttccagtgctccatgtcgaaagtgattctgctgatgatgatggccgtagaaca 2653 |||||||| ||||||||| | | |||||||||||| | |||||| || |||| Sbjct: 194 tcagaagtgccagtgctcagtttgaaaagtgattctgttaccaatgatgctcgacaaaca 253 Query: 2654 gtagtatcagttgataccaggtcatctacacgatggtcgctcgcaatcaatatgcaggaa 2713 || ||||||||||||| | ||||||||| || ||||| || |||||||||| || ||| Sbjct: 254 ataatatcagttgatactaagtcatctacgcgttggtcactggcaatcaataaacaagaa 313 Query: 2714 attgacgacttcactattgaagtggcttcagataagttggttcaactgggtggtaagact 2773 ||||| |||||||| || | |||| ||| || || ||||||| ||||||| ||||| Sbjct: 314 attgatgacttcacagttcatgtggattcggagaacttggttccactgggtaataagagc 373 Query: 2774 gaggtcggtggatggcatacaatccagtttgcaggcggcaagaacgcgccaacgaaattc 2833 ||| ||| ||| |||||||||||||||||||| || || ||| || | ||||| ||||| Sbjct: 374 gagatcgatgggtggcatacaatccagtttgctggtggtaaggactcaccaacaaaattt 433 Query: 2834 cagttagcccttttctggtcaagtaat 2860 ||| || ||||||||||| |||||||| Sbjct: 434 cagctaacccttttctgggcaagtaat 460 Score = 109 bits (55), Expect = 7e-20 Identities = 121/143 (84%) Strand = Plus / Plus Query: 2907 taaaactaagaacagacgtgaatagggtcacgccgatggtcgagacggttctcgagaagc 2966 ||||||||||||| || |||||||| || || |||| ||| | | |||||||||||||| Sbjct: 513 taaaactaagaacggatgtgaatagagttacaccgaaggttggcagggttctcgagaagc 572 Query: 2967 ttccacgctggtgtgcgcccttcggcaagtcgacatctccttacacgctggcgttcctga 3026 ||||| | |||||||| ||||| |||||||| || |||||||| || |||| ||| ||| Sbjct: 573 ttccaggatggtgtgcaccctttggcaagtctacttctccttatacattggctttcttga 632 Query: 3027 ccgctcttccagtcaatatttag 3049 |||||||||| |||||||||||| Sbjct: 633 ccgctcttcctgtcaatatttag 655
>dbj|AK071665.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106J16, full insert sequence Length = 940 Score = 188 bits (95), Expect = 9e-44 Identities = 359/447 (80%) Strand = Plus / Plus Query: 2414 acagaaccatcatcctacgtttccctgttctcgaacatgcctggaaagttgacacaggaa 2473 |||||||||||||| || ||| | |||||||| || | ||||||||||||||| ||||| Sbjct: 14 acagaaccatcatcatatgttactctgttctccaatacacctggaaagttgacaaaggaa 73 Query: 2474 ttgatggacctcagaggggaagagttttcttgcggaaggaatatgacaactgatttcgtg 2533 || | ||||| |||| ||||| |||||||| || ||||||| | | | |||||| || Sbjct: 74 ttagtagaccttagagatgaagaattttcttgtgggaggaatagggctattgattttgtt 133 Query: 2534 acatttaccgtgaagtatggctgcaggagttacaaagcgagcaacactggatggagcaaa 2593 ||||||||| |||| |||||||| ||||||| ||| || ||| ||||||||||||||| Sbjct: 134 acatttaccatgaaatatggctgtttgagttacgaagggaccaatactggatggagcaaa 193 Query: 2594 tcagaagttccagtgctccatgtcgaaagtgattctgctgatgatgatggccgtagaaca 2653 |||||||| ||||||||| | | |||||||||||| | |||||| || |||| Sbjct: 194 tcagaagtgccagtgctcagtttgaaaagtgattctgttaccaatgatgctcgacaaaca 253 Query: 2654 gtagtatcagttgataccaggtcatctacacgatggtcgctcgcaatcaatatgcaggaa 2713 || ||||||||||||| | ||||||||| || ||||| || |||||||||| || ||| Sbjct: 254 ataatatcagttgatactaagtcatctacgcgttggtcactggcaatcaataaacaagaa 313 Query: 2714 attgacgacttcactattgaagtggcttcagataagttggttcaactgggtggtaagact 2773 ||||| |||||||| || | |||| ||| || || ||||||| ||||||| ||||| Sbjct: 314 attgatgacttcacagttcatgtggattcggagaacttggttccactgggtaataagagc 373 Query: 2774 gaggtcggtggatggcatacaatccagtttgcaggcggcaagaacgcgccaacgaaattc 2833 ||| ||| ||| |||||||||||||||||||| || || ||| || | ||||| ||||| Sbjct: 374 gagatcgatgggtggcatacaatccagtttgctggtggtaaggactcaccaacaaaattt 433 Query: 2834 cagttagcccttttctggtcaagtaat 2860 ||| || ||||||||||| |||||||| Sbjct: 434 cagctaacccttttctgggcaagtaat 460 Score = 109 bits (55), Expect = 7e-20 Identities = 121/143 (84%) Strand = Plus / Plus Query: 2907 taaaactaagaacagacgtgaatagggtcacgccgatggtcgagacggttctcgagaagc 2966 ||||||||||||| || |||||||| || || |||| ||| | | |||||||||||||| Sbjct: 513 taaaactaagaacggatgtgaatagagttacaccgaaggttggcagggttctcgagaagc 572 Query: 2967 ttccacgctggtgtgcgcccttcggcaagtcgacatctccttacacgctggcgttcctga 3026 ||||| | |||||||| ||||| |||||||| || |||||||| || |||| ||| ||| Sbjct: 573 ttccaggatggtgtgcaccctttggcaagtctacttctccttatacattggctttcttga 632 Query: 3027 ccgctcttccagtcaatatttag 3049 |||||||||| |||||||||||| Sbjct: 633 ccgctcttcctgtcaatatttag 655
>gb|DQ106587.1| Hordeum vulgare subsp. vulgare cultivar Oregon Wolfe Barley Dominant clone 1 genomic sequence corresponding to Ds insertion site in TNP-69 Length = 724 Score = 147 bits (74), Expect = 3e-31 Identities = 104/114 (91%) Strand = Plus / Minus Query: 2147 aggaaccctggtgggctaccagactggcttggaaatgtagtagttgctgttgccatcgct 2206 |||||||| ||||| ||||||| |||||||||||||||||| |||||||||| |||||| Sbjct: 479 aggaaccccggtggactaccaggctggcttggaaatgtagtcgttgctgttgtcatcgca 420 Query: 2207 atagtcgtgtccttgacgtttgtgtatcttctttcgtatgtccatatttcaggt 2260 |||||||||||||| | ||| |||||||||||||| |||||||||||||||||| Sbjct: 419 atagtcgtgtcctttatgttggtgtatcttctttcatatgtccatatttcaggt 366 Score = 97.6 bits (49), Expect = 3e-16 Identities = 64/69 (92%) Strand = Plus / Minus Query: 2073 tgccagttatgtcatctgctggtttgtttattcgcatggtagatgtgatggttggcagta 2132 |||||||| ||||||||||||||||| ||||||||||||| ||||||||| |||||| || Sbjct: 723 tgccagttgtgtcatctgctggtttggttattcgcatggttgatgtgatgattggcacta 664 Query: 2133 ttgtacgtg 2141 ||||||||| Sbjct: 663 ttgtacgtg 655
>gb|DQ106588.1| Hordeum vulgare subsp. vulgare cultivar Oregon Wolfe Barley Recessive clone 10 genomic sequence corresponding to Ds insertion site in TNP-69 Length = 724 Score = 139 bits (70), Expect = 7e-29 Identities = 103/114 (90%) Strand = Plus / Minus Query: 2147 aggaaccctggtgggctaccagactggcttggaaatgtagtagttgctgttgccatcgct 2206 |||||||| ||||| ||||||| ||||||||||||||||| |||||||||| |||||| Sbjct: 479 aggaaccccggtggactaccaggctggcttggaaatgtaggcgttgctgttgtcatcgca 420 Query: 2207 atagtcgtgtccttgacgtttgtgtatcttctttcgtatgtccatatttcaggt 2260 |||||||||||||| | ||| |||||||||||||| |||||||||||||||||| Sbjct: 419 atagtcgtgtcctttatgttggtgtatcttctttcatatgtccatatttcaggt 366 Score = 97.6 bits (49), Expect = 3e-16 Identities = 64/69 (92%) Strand = Plus / Minus Query: 2073 tgccagttatgtcatctgctggtttgtttattcgcatggtagatgtgatggttggcagta 2132 |||||||| ||||||||||||||||| ||||||||||||| ||||||||| |||||| || Sbjct: 723 tgccagttgtgtcatctgctggtttggttattcgcatggttgatgtgatgattggcacta 664 Query: 2133 ttgtacgtg 2141 ||||||||| Sbjct: 663 ttgtacgtg 655
>gb|DQ106589.1| Hordeum vulgare subsp. vulgare cultivar Golden Promise clone 18 genomic sequence corresponding to Ds insertion site in TNP-69 Length = 724 Score = 131 bits (66), Expect = 2e-26 Identities = 102/114 (89%) Strand = Plus / Minus Query: 2147 aggaaccctggtgggctaccagactggcttggaaatgtagtagttgctgttgccatcgct 2206 |||||||| ||||| |||||| |||||||||||||||||| |||||||||| |||||| Sbjct: 479 aggaaccccggtggactaccaagctggcttggaaatgtagtcgttgctgttgtcatcgca 420 Query: 2207 atagtcgtgtccttgacgtttgtgtatcttctttcgtatgtccatatttcaggt 2260 |||||||||||||| | ||| |||||||||||||| |||||||| ||||||||| Sbjct: 419 atagtcgtgtcctttatgttggtgtatcttctttcatatgtccacatttcaggt 366 Score = 97.6 bits (49), Expect = 3e-16 Identities = 64/69 (92%) Strand = Plus / Minus Query: 2073 tgccagttatgtcatctgctggtttgtttattcgcatggtagatgtgatggttggcagta 2132 |||||||| ||||||||||||||||| ||||||||||||| ||||||||| |||||| || Sbjct: 723 tgccagttgtgtcatctgctggtttggttattcgcatggttgatgtgatgattggcacta 664 Query: 2133 ttgtacgtg 2141 ||||||||| Sbjct: 663 ttgtacgtg 655
>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05 map C53961S, complete sequence Length = 175121 Score = 97.6 bits (49), Expect = 3e-16 Identities = 130/157 (82%) Strand = Plus / Plus Query: 1992 atggtcttatggaagcaacactgactcctgtaaggtcacctaaacagcttaaggtcttta 2051 |||||||||||||||||||||| ||| || | |||||||||||||||||||| ||| Sbjct: 95520 atggtcttatggaagcaacactatctcatgctcgttcacctaaacagcttaaggttatta 95579 Query: 2052 cattggtcctggctttggctgtgccagttatgtcatctgctggtttgtttattcgcatgg 2111 ||||| | |||| ||||||| |||||| |||||| |||||||||| ||||| |||||| Sbjct: 95580 cattgattttggcattggctgcaccagttgtgtcatatgctggtttggttatttgcatgg 95639 Query: 2112 tagatgtgatggttggcagtattgtacgtgttgatag 2148 | ||||| | |||| ||||||||||| ||||||| Sbjct: 95640 ttgatgttgtaattgggagtattgtacgcattgatag 95676 Score = 75.8 bits (38), Expect = 9e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 2147 aggaaccctggtgggctaccagactggcttggaaatgtagtagttgctgttgccatcgct 2206 |||||||||||||| |||||| | |||||||| ||||||||||| |||||||||| ||| Sbjct: 95841 aggaaccctggtggcctaccaaattggcttggcaatgtagtagtctctgttgccattgct 95900 Query: 2207 atagtcgtgtccttgacgtttgtgtatcttctttcgtatgtccatatttcaggt 2260 || ||| | | || || | ||||||||||||||| || || ||||| |||||| Sbjct: 95901 attgtcatatgttttacctgtgtgtatcttctttcttacgttcatatatcaggt 95954
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 97.6 bits (49), Expect = 3e-16 Identities = 130/157 (82%) Strand = Plus / Plus Query: 1992 atggtcttatggaagcaacactgactcctgtaaggtcacctaaacagcttaaggtcttta 2051 |||||||||||||||||||||| ||| || | |||||||||||||||||||| ||| Sbjct: 11309162 atggtcttatggaagcaacactatctcatgctcgttcacctaaacagcttaaggttatta 11309221 Query: 2052 cattggtcctggctttggctgtgccagttatgtcatctgctggtttgtttattcgcatgg 2111 ||||| | |||| ||||||| |||||| |||||| |||||||||| ||||| |||||| Sbjct: 11309222 cattgattttggcattggctgcaccagttgtgtcatatgctggtttggttatttgcatgg 11309281 Query: 2112 tagatgtgatggttggcagtattgtacgtgttgatag 2148 | ||||| | |||| ||||||||||| ||||||| Sbjct: 11309282 ttgatgttgtaattgggagtattgtacgcattgatag 11309318 Score = 75.8 bits (38), Expect = 9e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 2147 aggaaccctggtgggctaccagactggcttggaaatgtagtagttgctgttgccatcgct 2206 |||||||||||||| |||||| | |||||||| ||||||||||| |||||||||| ||| Sbjct: 11309483 aggaaccctggtggcctaccaaattggcttggcaatgtagtagtctctgttgccattgct 11309542 Query: 2207 atagtcgtgtccttgacgtttgtgtatcttctttcgtatgtccatatttcaggt 2260 || ||| | | || || | ||||||||||||||| || || ||||| |||||| Sbjct: 11309543 attgtcatatgttttacctgtgtgtatcttctttcttacgttcatatatcaggt 11309596
>ref|NM_001074272.1| Oryza sativa (japonica cultivar-group) Os11g0303400 (Os11g0303400) mRNA, complete cds Length = 1567 Score = 71.9 bits (36), Expect = 1e-08 Identities = 93/112 (83%) Strand = Plus / Plus Query: 2147 aggaaccctggtgggctaccagactggcttggaaatgtagtagttgctgttgccatcgct 2206 |||||||||||||| |||||| | |||||||| ||||||||||| |||||||||| ||| Sbjct: 1079 aggaaccctggtggcctaccaaattggcttggcaatgtagtagtctctgttgccattgct 1138 Query: 2207 atagtcgtgtccttgacgtttgtgtatcttctttcgtatgtccatatttcag 2258 || ||| | | || || | ||||||||||||||| || || ||||| |||| Sbjct: 1139 attgtcatatgttttacctgtgtgtatcttctttcttacgttcatatatcag 1190 Score = 52.0 bits (26), Expect = 0.013 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1992 atggtcttatggaagcaacactgactcctgtaaggtcacctaaacagcttaagg 2045 |||||||||||||||||||||| ||| || | ||||||||||||||||||| Sbjct: 1028 atggtcttatggaagcaacactatctcatgctcgttcacctaaacagcttaagg 1081
>dbj|AK099876.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111H14, full insert sequence Length = 1567 Score = 71.9 bits (36), Expect = 1e-08 Identities = 93/112 (83%) Strand = Plus / Plus Query: 2147 aggaaccctggtgggctaccagactggcttggaaatgtagtagttgctgttgccatcgct 2206 |||||||||||||| |||||| | |||||||| ||||||||||| |||||||||| ||| Sbjct: 1079 aggaaccctggtggcctaccaaattggcttggcaatgtagtagtctctgttgccattgct 1138 Query: 2207 atagtcgtgtccttgacgtttgtgtatcttctttcgtatgtccatatttcag 2258 || ||| | | || || | ||||||||||||||| || || ||||| |||| Sbjct: 1139 attgtcatatgttttacctgtgtgtatcttctttcttacgttcatatatcag 1190 Score = 52.0 bits (26), Expect = 0.013 Identities = 47/54 (87%) Strand = Plus / Plus Query: 1992 atggtcttatggaagcaacactgactcctgtaaggtcacctaaacagcttaagg 2045 |||||||||||||||||||||| ||| || | ||||||||||||||||||| Sbjct: 1028 atggtcttatggaagcaacactatctcatgctcgttcacctaaacagcttaagg 1081
>gb|AY111312.1| Zea mays CL3400_1 mRNA sequence Length = 640 Score = 65.9 bits (33), Expect = 9e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 2903 ctggtaaaactaagaacagacgtgaatagggtcacgccgatggtcgagacggttctcgag 2962 ||||| |||||||||||||| |||||||| ||||| ||| ||| | | ||| | ||| Sbjct: 363 ctggtgaaactaagaacagatgtgaatagagtcacaccgcaggtggcaagggtggtggag 304 Query: 2963 aagcttccacgctggtgtgcgcccttcggcaagtcgacatctccttacacgct 3015 ||||| ||||| ||||| |||||||||||||||| || ||||| |||||||| Sbjct: 303 aagctgccacggtggtgcacgcccttcggcaagtccacctctccgtacacgct 251
>dbj|AK226584.1| Arabidopsis thaliana mRNA for 24 kDa vacuolar protein - like, complete cds, clone: RAFL07-14-M21 Length = 2986 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1202 ataaaatctgctactgatttccaaatatatgaggaggttgctggtct 1248 ||||||||||| |||||||||||| |||| |||||||||||||||| Sbjct: 1066 ataaaatctgcgactgatttccaagtatacaaggaggttgctggtct 1112 Score = 44.1 bits (22), Expect = 3.3 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1323 aaccaggatcccttcagcataatggagaaaatatgcttgccttcct 1368 |||||||||| || |||||| ||| |||||||||||||| ||||| Sbjct: 1187 aaccaggatcgctccagcatcttggggaaaatatgcttgctttcct 1232
>ref|NM_122073.1| Arabidopsis thaliana ATP binding / peptidase (AT5G20660) mRNA, complete cds Length = 2996 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1202 ataaaatctgctactgatttccaaatatatgaggaggttgctggtct 1248 ||||||||||| |||||||||||| |||| |||||||||||||||| Sbjct: 1071 ataaaatctgcgactgatttccaagtatacaaggaggttgctggtct 1117 Score = 44.1 bits (22), Expect = 3.3 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1323 aaccaggatcccttcagcataatggagaaaatatgcttgccttcct 1368 |||||||||| || |||||| ||| |||||||||||||| ||||| Sbjct: 1192 aaccaggatcgctccagcatcttggggaaaatatgcttgctttcct 1237
>gb|AF296832.1|T1M15 Arabidopsis thaliana BAC T1M15 Length = 89490 Score = 61.9 bits (31), Expect = 1e-05 Identities = 43/47 (91%) Strand = Plus / Plus Query: 1202 ataaaatctgctactgatttccaaatatatgaggaggttgctggtct 1248 ||||||||||| |||||||||||| |||| |||||||||||||||| Sbjct: 21049 ataaaatctgcgactgatttccaagtatacaaggaggttgctggtct 21095 Score = 44.1 bits (22), Expect = 3.3 Identities = 40/46 (86%) Strand = Plus / Plus Query: 1323 aaccaggatcccttcagcataatggagaaaatatgcttgccttcct 1368 |||||||||| || |||||| ||| |||||||||||||| ||||| Sbjct: 21262 aaccaggatcgctccagcatcttggggaaaatatgcttgctttcct 21307
>ref|XM_001003501.1| PREDICTED: Mus musculus Rho GTPase activating protein 21, transcript variant 1 (Arhgap21), mRNA Length = 3751 Score = 48.1 bits (24), Expect = 0.21 Identities = 24/24 (100%) Strand = Plus / Plus Query: 933 ttgctcagtgggctcatgggttta 956 |||||||||||||||||||||||| Sbjct: 3562 ttgctcagtgggctcatgggttta 3585
>ref|XM_899907.2| PREDICTED: Mus musculus Rho GTPase activating protein 21, transcript variant 3 (Arhgap21), mRNA Length = 3751 Score = 48.1 bits (24), Expect = 0.21 Identities = 24/24 (100%) Strand = Plus / Plus Query: 933 ttgctcagtgggctcatgggttta 956 |||||||||||||||||||||||| Sbjct: 3562 ttgctcagtgggctcatgggttta 3585
>emb|AL929100.11| Mouse DNA sequence from clone RP23-436G18 on chromosome 2, complete sequence Length = 196372 Score = 48.1 bits (24), Expect = 0.21 Identities = 24/24 (100%) Strand = Plus / Minus Query: 933 ttgctcagtgggctcatgggttta 956 |||||||||||||||||||||||| Sbjct: 190652 ttgctcagtgggctcatgggttta 190629
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 46.1 bits (23), Expect = 0.83 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1198 agcaataaaatctgctactgatt 1220 ||||||||||||||||||||||| Sbjct: 1091336 agcaataaaatctgctactgatt 1091314
>gb|AC107218.4| Homo sapiens BAC clone RP11-561A13 from 2, complete sequence Length = 164620 Score = 46.1 bits (23), Expect = 0.83 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1460 attctgagcaagtacatggtggt 1482 ||||||||||||||||||||||| Sbjct: 152252 attctgagcaagtacatggtggt 152230
>dbj|AP000346.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1572G7 Length = 151600 Score = 46.1 bits (23), Expect = 0.83 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1218 atttccaaatatatgaggaggtt 1240 ||||||||||||||||||||||| Sbjct: 66131 atttccaaatatatgaggaggtt 66153
>dbj|AP000345.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB208E9 Length = 113255 Score = 46.1 bits (23), Expect = 0.83 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1218 atttccaaatatatgaggaggtt 1240 ||||||||||||||||||||||| Sbjct: 106009 atttccaaatatatgaggaggtt 106031
>gb|CP000350.1| Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 1, complete sequence Length = 3576473 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1768 tattggatttattctcctgaag 1789 |||||||||||||||||||||| Sbjct: 3491950 tattggatttattctcctgaag 3491971
>gb|CP000348.1| Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence Length = 3614446 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1768 tattggatttattctcctgaag 1789 |||||||||||||||||||||| Sbjct: 138338 tattggatttattctcctgaag 138317
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1336 tcagcataatggagaaaatatg 1357 |||||||||||||||||||||| Sbjct: 17692081 tcagcataatggagaaaatatg 17692060
>gb|AC166902.2| Mus musculus BAC clone RP24-425L9 from chromosome 9, complete sequence Length = 184017 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2874 ctccaaaggaagcagaaggccc 2895 |||||||||||||||||||||| Sbjct: 137845 ctccaaaggaagcagaaggccc 137866
>gb|AC010054.7| Drosophila melanogaster 3L BAC RP98-15E10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173109 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1336 tcagcataatggagaaaatatg 1357 |||||||||||||||||||||| Sbjct: 133049 tcagcataatggagaaaatatg 133028
>gb|AC009375.8| Drosophila melanogaster 3L BAC RP98-44L18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 180787 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1336 tcagcataatggagaaaatatg 1357 |||||||||||||||||||||| Sbjct: 47696 tcagcataatggagaaaatatg 47675
>gb|AC000134.14| Homo sapiens Chromosome 11q13 BAC Clone 137c7, complete sequence Length = 203300 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 904 aggagtcatgctagagatggca 925 |||||||||||||||||||||| Sbjct: 9409 aggagtcatgctagagatggca 9430
>gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141J21 containing NRXN2 (NRXN2) gene, partial cds; and RST and OAT4 genes, complete cds, complete sequence Length = 170114 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 904 aggagtcatgctagagatggca 925 |||||||||||||||||||||| Sbjct: 60179 aggagtcatgctagagatggca 60158
>gb|AC153515.8| Mus musculus 10 BAC RP23-425D13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 209920 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2044 ggtctttacattggtcctggct 2065 |||||||||||||||||||||| Sbjct: 204668 ggtctttacattggtcctggct 204647
>gb|AC123530.4| Mus musculus BAC clone RP24-194D2 from chromosome 10, complete sequence Length = 164420 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2044 ggtctttacattggtcctggct 2065 |||||||||||||||||||||| Sbjct: 51561 ggtctttacattggtcctggct 51540
>gb|AC151485.5| Monodelphis domestica, clone XX-214B11, complete sequence Length = 182310 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 223 ccagcctccctctgctcctccc 244 |||||||||||||||||||||| Sbjct: 144662 ccagcctccctctgctcctccc 144641
>dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727K3, complete sequence Length = 160739 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 904 aggagtcatgctagagatggca 925 |||||||||||||||||||||| Sbjct: 100750 aggagtcatgctagagatggca 100771
>dbj|AP006288.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-128H22, complete sequence Length = 169259 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 904 aggagtcatgctagagatggca 925 |||||||||||||||||||||| Sbjct: 139905 aggagtcatgctagagatggca 139926
>gb|AC155246.1| Mus musculus BAC clone RP24-303C15 from 14, complete sequence Length = 151983 Score = 44.1 bits (22), Expect = 3.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3030 ctcttccagtcaatatttaggc 3051 |||||||||||||||||||||| Sbjct: 66295 ctcttccagtcaatatttaggc 66274 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 611,115,936 Number of extensions: 32285239 Number of successful extensions: 180903 Number of sequences better than 10.0: 38 Number of HSP's gapped: 180891 Number of HSP's successfully gapped: 112 Length of query: 3367 Length of database: 18,610,659,111 Length adjustment: 24 Effective length of query: 3343 Effective length of database: 18,499,340,271 Effective search space: 61843294525953 Effective search space used: 61843294525953 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
