ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf53d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P46270:UCR10_SOLTU Ubiquinol-cytochrome c reductase complex 8.0 ... 96 8e-20
2P22289:UCR9_YEAST Ubiquinol-cytochrome c reductase complex 7.3 k... 38 0.027
3Q9Y2D9:ZN652_HUMAN Zinc finger protein 652 - Homo sapiens (Human) 29 9.6

>P46270:UCR10_SOLTU Ubiquinol-cytochrome c reductase complex 8.0 kDa protein - Solanum|
           tuberosum (Potato)
          Length = 72
 Score = 95.9 bits (237), Expect = 8e-20
 Identities = 44/62 (70%), Positives = 51/62 (82%)
 Frame = +1

Query: 112 GLWDAMYRVVMRRNGVYVTFVVAGAFAGERLVDYGVNRVWEMNNVGKRYQDISVLGQRPV 291
           G+ +  YR+VMRR  VYVTFV+AGA  GER VDYGV  +WE NNVGKRY+DISVLGQRPV
Sbjct: 11  GVLEGFYRLVMRRTPVYVTFVIAGALLGERAVDYGVKTLWEKNNVGKRYEDISVLGQRPV 70

Query: 292 EE 297
           +E
Sbjct: 71  DE 72



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>P22289:UCR9_YEAST Ubiquinol-cytochrome c reductase complex 7.3 kDa protein -|
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 66

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 15/50 (30%), Positives = 30/50 (60%)
 Frame = +1

Query: 118 WDAMYRVVMRRNGVYVTFVVAGAFAGERLVDYGVNRVWEMNNVGKRYQDI 267
           + ++Y+   +RN V+V  + AGAF  + + D  +   +E +N GK ++D+
Sbjct: 3   FSSLYKTFFKRNAVFVGTIFAGAFVFQTVFDTAITSWYENHNKGKLWKDV 52



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>Q9Y2D9:ZN652_HUMAN Zinc finger protein 652 - Homo sapiens (Human)|
          Length = 606

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = -2

Query: 342 ISLQRPREVRASVSSLLNRPLPQN*YVLIPFPDVVHLPDPVDAVVHQPLASEGAGDD 172
           +S   PR +    S L   P P + + L P P V HLP P      +PL   G  +D
Sbjct: 535 VSTLPPRPIPHPFSHLHIHPHPHHPHHL-PIPPVPHLPPPPALFKSEPLNHRGQSED 590


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 81,375,829
Number of extensions: 1629579
Number of successful extensions: 3382
Number of sequences better than 10.0: 3
Number of HSP's gapped: 3382
Number of HSP's successfully gapped: 3
Length of query: 184
Length of database: 100,686,439
Length adjustment: 106
Effective length of query: 78
Effective length of database: 71,611,169
Effective search space: 5585671182
Effective search space used: 5585671182
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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