No.
Definition
Score (bits)
E Value
1 dbj|AK243633.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
519
e-144
2 ref|NM_001058989.1| Oryza sativa (japonica cultivar-group) Os04g...
436
e-119
3 ref|NM_001059009.1| Oryza sativa (japonica cultivar-group) Os04g...
412
e-111
4 emb|CR855065.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
278
5e-71
5 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
278
5e-71
6 emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4,...
278
5e-71
7 emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromosome 4,...
262
3e-66
8 emb|CR855064.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
165
5e-37
9 ref|NM_001061304.1| Oryza sativa (japonica cultivar-group) Os05g...
147
1e-31
10 gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome...
147
1e-31
11 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
147
1e-31
12 gb|AC158497.2| Medicago truncatula chromosome 2 BAC clone mth2-4...
54
0.001
13 ref|XM_001215667.1| Aspergillus terreus NIH2624 conserved hypoth...
48
0.079
14 gb|AC182722.2| Populus trichocarpa clone Pop1-92L17, complete se...
48
0.079
15 gb|BT012725.1| Lycopersicon esculentum clone 113653F, mRNA sequence
48
0.079
16 dbj|AP004531.1| Lotus japonicus genomic DNA, chromosome 3, clone...
48
0.079
17 gb|CP000458.1| Burkholderia cenocepacia HI2424 chromosome 1, com...
46
0.31
18 gb|CP000378.1| Burkholderia cenocepacia AU 1054 chromosome 1, co...
46
0.31
19 gb|AC021744.14| Homo sapiens chromosome 8, clone RP11-284H18, co...
46
0.31
20 emb|AL807794.6| Mouse DNA sequence from clone RP23-192K24 on chr...
46
0.31
21 ref|NM_121464.1| Arabidopsis thaliana S-adenosylmethionine-depen...
44
1.2
22 gb|AY089097.1| Arabidopsis thaliana clone 32767 mRNA, complete s...
44
1.2
23 emb|AL645644.8| Mouse DNA sequence from clone RP23-400O5 on chro...
44
1.2
24 gb|BT005133.1| Arabidopsis thaliana clone U20583 unknown protein...
44
1.2
25 gb|BT004164.1| Arabidopsis thaliana clone RAFL15-19-B08 (R20583)...
44
1.2
26 ref|XM_001226233.1| Chaetomium globosum CBS 148.51 hypothetical ...
42
4.9
27 dbj|AK242372.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
42
4.9
28 ref|XR_014540.1| PREDICTED: Macaca mulatta hypothetical protein ...
42
4.9
29 emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl...
42
4.9
30 gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome
42
4.9
31 gb|AC119908.16| Mus musculus chromosome 7, clone RP24-240G4, com...
42
4.9
32 gb|AC125317.4| Mus musculus BAC clone RP24-286L23 from chromosom...
42
4.9
33 gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
42
4.9
34 gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g...
42
4.9
35 gb|AC138696.4| Homo sapiens chromosome 8, clone RP13-582O9, comp...
42
4.9
36 gb|AF459639.1| Triticum monococcum BAC clones 116F2 and 115G1 ge...
42
4.9
37 emb|AL732317.13| Mouse DNA sequence from clone RP23-139F8 on chr...
42
4.9
>emb|CR855065.1 | Oryza sativa genomic DNA, chromosome 4, BAC clone: H0725E11, complete
sequence
Length = 121361
Score = 278 bits (140), Expect = 5e-71
Identities = 224/252 (88%)
Strand = Plus / Plus
Query: 243 ggcggcgggttcgtccacctcctcgcgccgaccccggagctctggacgctcgtgctcagc 302
||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 94266 ggcggcgggttcgtccacctccttgcgcccacccctgagctgtggacgctcgtgctcagc 94325
Query: 303 caccggacacagatcctctacattgccgatatcagcctcgtggtggcctacctcgagctc 362
|||||||| |||||||||||| | ||||| ||||||||||| || ||||||||||||||
Sbjct: 94326 caccggacgcagatcctctacctcgccgacatcagcctcgtcgtctcctacctcgagctc 94385
Query: 363 gtccctgggtgcgtcgtgctggagtccggaacggggagcggttcgctcaccacctcgcta 422
||||| |||||| ||||||| |||||||| || |||||||| || ||||||||||||||
Sbjct: 94386 gtccccgggtgcctcgtgctcgagtccggcaccgggagcggctccctcaccacctcgctc 94445
Query: 423 gcccgcgccgtcgcgccgcacgggcgggtgtacacgttcgatttccacgaccagagggca 482
|||||||||||||| |||||||| || || | ||| |||||||||||||||||||||||
Sbjct: 94446 gcccgcgccgtcgccccgcacggccgcgtctgcaccttcgatttccacgaccagagggcc 94505
Query: 483 gactcggcaagg 494
| ||| ||||||
Sbjct: 94506 gcctccgcaagg 94517
Score = 165 bits (83), Expect = 5e-37
Identities = 206/247 (83%)
Strand = Plus / Plus
Query: 492 agggaagattttgagaagaatggcctaagcagccttataacagttgctgttcaggacata 551
|||||||||||||||| ||||||||| | |||| | || ||||| || |||| |||||||
Sbjct: 95543 agggaagattttgagaggaatggcctgaccagcataatcacagtcgcagttcgggacata 95602
Query: 552 caaggggaaggattcccagatgagtactctggagctgctgacgctgtgttcctggactta 611
||||| |||| ||||| || || || |||| ||||| || ||||||||| ||||||||
Sbjct: 95603 caaggacaagggttccctgaggaacacactggtgctgccgatgctgtgttcttggactta 95662
Query: 612 ccccagccttggctggcaataccgtcagctggtacaatgctacggcaagatggcatccta 671
|||||||||||||| |||||||| || || || || |||||| ||||||||| | ||
Sbjct: 95663 ccccagccttggcttgcaataccttctgcggggactatgctaaagcaagatggagtttta 95722
Query: 672 tgctccttttcaccttgcattgaacaagtacagcgtgcttgcgaaactatgaggtcttgt 731
|||||||| ||||| |||||||| ||||| ||||| ||||||||| ||||||| || |||
Sbjct: 95723 tgctccttctcaccctgcattgagcaagtgcagcgggcttgcgaagctatgagatcatgt 95782
Query: 732 ttcacag 738
|||||||
Sbjct: 95783 ttcacag 95789
Score = 129 bits (65), Expect = 3e-26
Identities = 140/165 (84%)
Strand = Plus / Plus
Query: 35 caagcccacctcgcagcgccgcatcgcggagggcgacaccgtcgtggtgtacgagcggca 94
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 94049 caagcccacctcccagcgccgcatcgcggagggggacaccgtcgtggtgtacgagcgcca 94108
Query: 95 cgactcgatgcgcgcagtcaccgtcagcgccgctggcgtactgcagaaccggttcggcgt 154
|||| | |||||||| ||| |||| | | | | ||| || |||||||| ||||||||
Sbjct: 94109 cgacgccatgcgcgccgtcgccgtgctcccgggggccgtgctccagaaccgattcggcgt 94168
Query: 155 atttcgccacgccgactggctcggccgccacttcggatccaaggt 199
|| ||||||| ||||||| ||||||||| |||||| | ||||||
Sbjct: 94169 cttccgccacgacgactggatcggccgccccttcggctgcaaggt 94213
Score = 89.7 bits (45), Expect = 2e-14
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 736 cagatattagaacttttgaaattcttctccgcacctatgaagtacatgaaggtgctctga 795
||||||||||||| |||||||||||||| |||||||||||||||| ||||||| | |||
Sbjct: 96478 cagatattagaacctttgaaattcttcttcgcacctatgaagtacgagaaggtggtttga 96537
Query: 796 agagtgcaaccaccaatgaag 816
|| |||| || ||||||||||
Sbjct: 96538 agggtgccacaaccaatgaag 96558
Score = 73.8 bits (37), Expect = 1e-09
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 902 tgttattgctaggccttgcagcacagctagaggacacactggctacttgacatttgc 958
|||||| | ||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 96644 tgttatggttaggccttgtagcactgctagaggacacactggctacctgacatttgc 96700
>dbj|AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
Length = 35498469
Score = 278 bits (140), Expect = 5e-71
Identities = 224/252 (88%)
Strand = Plus / Plus
Query: 243 ggcggcgggttcgtccacctcctcgcgccgaccccggagctctggacgctcgtgctcagc 302
||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 14718929 ggcggcgggttcgtccacctccttgcgcccacccctgagctgtggacgctcgtgctcagc 14718988
Query: 303 caccggacacagatcctctacattgccgatatcagcctcgtggtggcctacctcgagctc 362
|||||||| |||||||||||| | ||||| ||||||||||| || ||||||||||||||
Sbjct: 14718989 caccggacgcagatcctctacctcgccgacatcagcctcgtcgtctcctacctcgagctc 14719048
Query: 363 gtccctgggtgcgtcgtgctggagtccggaacggggagcggttcgctcaccacctcgcta 422
||||| |||||| ||||||| |||||||| || |||||||| || ||||||||||||||
Sbjct: 14719049 gtccccgggtgcctcgtgctcgagtccggcaccgggagcggctccctcaccacctcgctc 14719108
Query: 423 gcccgcgccgtcgcgccgcacgggcgggtgtacacgttcgatttccacgaccagagggca 482
|||||||||||||| |||||||| || || | ||| |||||||||||||||||||||||
Sbjct: 14719109 gcccgcgccgtcgccccgcacggccgcgtctgcaccttcgatttccacgaccagagggcc 14719168
Query: 483 gactcggcaagg 494
| ||| ||||||
Sbjct: 14719169 gcctccgcaagg 14719180
Score = 262 bits (132), Expect = 3e-66
Identities = 222/252 (88%)
Strand = Plus / Minus
Query: 243 ggcggcgggttcgtccacctcctcgcgccgaccccggagctctggacgctcgtgctcagc 302
||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 15169010 ggcggcgggttcgtccacctccttgcgcccacccctgagctgtggacgctcgtgctcagc 15168951
Query: 303 caccggacacagatcctctacattgccgatatcagcctcgtggtggcctacctcgagctc 362
|||||||| |||||||||||| | ||||| ||||||||||| || ||||||||||||||
Sbjct: 15168950 caccggacgcagatcctctacctcgccgacatcagcctcgtcgtctcctacctcgagctc 15168891
Query: 363 gtccctgggtgcgtcgtgctggagtccggaacggggagcggttcgctcaccacctcgcta 422
||||| |||||| |||| || |||||||| || |||||||| || ||||||||||||||
Sbjct: 15168890 gtccccgggtgcctcgtactcgagtccggcaccgggagcggctccctcaccacctcgctc 15168831
Query: 423 gcccgcgccgtcgcgccgcacgggcgggtgtacacgttcgatttccacgaccagagggca 482
|||||||||||||| |||||||| || || | ||| ||||||||||||||||| |||||
Sbjct: 15168830 gcccgcgccgtcgccccgcacggccgcgtctgcaccttcgatttccacgaccaaagggcc 15168771
Query: 483 gactcggcaagg 494
| ||| ||||||
Sbjct: 15168770 gcctccgcaagg 15168759
Score = 165 bits (83), Expect = 5e-37
Identities = 206/247 (83%)
Strand = Plus / Plus
Query: 492 agggaagattttgagaagaatggcctaagcagccttataacagttgctgttcaggacata 551
|||||||||||||||| ||||||||| | |||| | || ||||| || |||| |||||||
Sbjct: 14720206 agggaagattttgagaggaatggcctgaccagcataatcacagtcgcagttcgggacata 14720265
Query: 552 caaggggaaggattcccagatgagtactctggagctgctgacgctgtgttcctggactta 611
||||| |||| ||||| || || || |||| ||||| || ||||||||| ||||||||
Sbjct: 14720266 caaggacaagggttccctgaggaacacactggtgctgccgatgctgtgttcttggactta 14720325
Query: 612 ccccagccttggctggcaataccgtcagctggtacaatgctacggcaagatggcatccta 671
|||||||||||||| |||||||| || || || || |||||| ||||||||| | ||
Sbjct: 14720326 ccccagccttggcttgcaataccttctgcggggactatgctaaagcaagatggagtttta 14720385
Query: 672 tgctccttttcaccttgcattgaacaagtacagcgtgcttgcgaaactatgaggtcttgt 731
|||||||| ||||| |||||||| ||||| ||||| ||||||||| ||||||| || |||
Sbjct: 14720386 tgctccttctcaccctgcattgagcaagtgcagcgggcttgcgaagctatgagatcatgt 14720445
Query: 732 ttcacag 738
|||||||
Sbjct: 14720446 ttcacag 14720452
Score = 157 bits (79), Expect = 1e-34
Identities = 205/247 (82%)
Strand = Plus / Minus
Query: 492 agggaagattttgagaagaatggcctaagcagccttataacagttgctgttcaggacata 551
|||||||||||||||| ||||| ||| | |||| | || ||||| || |||| |||||||
Sbjct: 15167732 agggaagattttgagaggaatgacctgaccagcataatcacagtcgcagttcgggacata 15167673
Query: 552 caaggggaaggattcccagatgagtactctggagctgctgacgctgtgttcctggactta 611
||||| |||| ||||| || || || |||| ||||| || ||||||||| ||||||||
Sbjct: 15167672 caaggacaagggttccctgaggaacacactggtgctgccgatgctgtgttcttggactta 15167613
Query: 612 ccccagccttggctggcaataccgtcagctggtacaatgctacggcaagatggcatccta 671
|||||||||||||| |||||||| || || || || |||||| ||||||||| | ||
Sbjct: 15167612 ccccagccttggcttgcaataccttctgcggggactatgctaaagcaagatggagtttta 15167553
Query: 672 tgctccttttcaccttgcattgaacaagtacagcgtgcttgcgaaactatgaggtcttgt 731
|||||||| ||||| |||||||| ||||| ||||| ||||||||| ||||||| || |||
Sbjct: 15167552 tgctccttctcaccctgcattgagcaagtgcagcgggcttgcgaagctatgagatcatgt 15167493
Query: 732 ttcacag 738
|||||||
Sbjct: 15167492 ttcacag 15167486
Score = 137 bits (69), Expect = 1e-28
Identities = 141/165 (85%)
Strand = Plus / Minus
Query: 35 caagcccacctcgcagcgccgcatcgcggagggcgacaccgtcgtggtgtacgagcggca 94
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 15169227 caagcccacctcccagcgccgcatcgcggagggggacaccgtcgtggtgtacgagcgcca 15169168
Query: 95 cgactcgatgcgcgcagtcaccgtcagcgccgctggcgtactgcagaaccggttcggcgt 154
|||| | |||||||| ||| |||| || | | | ||| || |||||||| ||||||||
Sbjct: 15169167 cgacgccatgcgcgccgtcgccgtgcgcccgggggccgtgctccagaaccgattcggcgt 15169108
Query: 155 atttcgccacgccgactggctcggccgccacttcggatccaaggt 199
|| ||||||| ||||||| ||||||||| |||||| | ||||||
Sbjct: 15169107 cttccgccacgacgactggatcggccgccccttcggctgcaaggt 15169063
Score = 129 bits (65), Expect = 3e-26
Identities = 140/165 (84%)
Strand = Plus / Plus
Query: 35 caagcccacctcgcagcgccgcatcgcggagggcgacaccgtcgtggtgtacgagcggca 94
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 14718712 caagcccacctcccagcgccgcatcgcggagggggacaccgtcgtggtgtacgagcgcca 14718771
Query: 95 cgactcgatgcgcgcagtcaccgtcagcgccgctggcgtactgcagaaccggttcggcgt 154
|||| | |||||||| ||| |||| | | | | ||| || |||||||| ||||||||
Sbjct: 14718772 cgacgccatgcgcgccgtcgccgtgctcccgggggccgtgctccagaaccgattcggcgt 14718831
Query: 155 atttcgccacgccgactggctcggccgccacttcggatccaaggt 199
|| ||||||| ||||||| ||||||||| |||||| | ||||||
Sbjct: 14718832 cttccgccacgacgactggatcggccgccccttcggctgcaaggt 14718876
Score = 89.7 bits (45), Expect = 2e-14
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 736 cagatattagaacttttgaaattcttctccgcacctatgaagtacatgaaggtgctctga 795
||||||||||||| |||||||||||||| |||||||||||||||| ||||||| | |||
Sbjct: 14721141 cagatattagaacctttgaaattcttcttcgcacctatgaagtacgagaaggtggtttga 14721200
Query: 796 agagtgcaaccaccaatgaag 816
|| |||| || ||||||||||
Sbjct: 14721201 agggtgccacaaccaatgaag 14721221
Score = 89.7 bits (45), Expect = 2e-14
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 736 cagatattagaacttttgaaattcttctccgcacctatgaagtacatgaaggtgctctga 795
||||||||||||| |||||||||||||| |||||||||||||||| ||||||| | |||
Sbjct: 15166797 cagatattagaacctttgaaattcttcttcgcacctatgaagtacgagaaggtggtttga 15166738
Query: 796 agagtgcaaccaccaatgaag 816
|| |||| || ||||||||||
Sbjct: 15166737 agggtgccacaaccaatgaag 15166717
Score = 73.8 bits (37), Expect = 1e-09
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 902 tgttattgctaggccttgcagcacagctagaggacacactggctacttgacatttgc 958
|||||| | ||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 14721307 tgttatggttaggccttgtagcactgctagaggacacactggctacctgacatttgc 14721363
Score = 73.8 bits (37), Expect = 1e-09
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 902 tgttattgctaggccttgcagcacagctagaggacacactggctacttgacatttgc 958
|||||| | ||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 15166634 tgttatggttaggccttgtagcactgctagaggacacactggctacctgacatttgc 15166578
>emb|AL606443.3 |OSJN00008 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026L04,
complete sequence
Length = 129563
Score = 278 bits (140), Expect = 5e-71
Identities = 224/252 (88%)
Strand = Plus / Plus
Query: 243 ggcggcgggttcgtccacctcctcgcgccgaccccggagctctggacgctcgtgctcagc 302
||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 58583 ggcggcgggttcgtccacctccttgcgcccacccctgagctgtggacgctcgtgctcagc 58642
Query: 303 caccggacacagatcctctacattgccgatatcagcctcgtggtggcctacctcgagctc 362
|||||||| |||||||||||| | ||||| ||||||||||| || ||||||||||||||
Sbjct: 58643 caccggacgcagatcctctacctcgccgacatcagcctcgtcgtctcctacctcgagctc 58702
Query: 363 gtccctgggtgcgtcgtgctggagtccggaacggggagcggttcgctcaccacctcgcta 422
||||| |||||| ||||||| |||||||| || |||||||| || ||||||||||||||
Sbjct: 58703 gtccccgggtgcctcgtgctcgagtccggcaccgggagcggctccctcaccacctcgctc 58762
Query: 423 gcccgcgccgtcgcgccgcacgggcgggtgtacacgttcgatttccacgaccagagggca 482
|||||||||||||| |||||||| || || | ||| |||||||||||||||||||||||
Sbjct: 58763 gcccgcgccgtcgccccgcacggccgcgtctgcaccttcgatttccacgaccagagggcc 58822
Query: 483 gactcggcaagg 494
| ||| ||||||
Sbjct: 58823 gcctccgcaagg 58834
Score = 165 bits (83), Expect = 5e-37
Identities = 206/247 (83%)
Strand = Plus / Plus
Query: 492 agggaagattttgagaagaatggcctaagcagccttataacagttgctgttcaggacata 551
|||||||||||||||| ||||||||| | |||| | || ||||| || |||| |||||||
Sbjct: 59860 agggaagattttgagaggaatggcctgaccagcataatcacagtcgcagttcgggacata 59919
Query: 552 caaggggaaggattcccagatgagtactctggagctgctgacgctgtgttcctggactta 611
||||| |||| ||||| || || || |||| ||||| || ||||||||| ||||||||
Sbjct: 59920 caaggacaagggttccctgaggaacacactggtgctgccgatgctgtgttcttggactta 59979
Query: 612 ccccagccttggctggcaataccgtcagctggtacaatgctacggcaagatggcatccta 671
|||||||||||||| |||||||| || || || || |||||| ||||||||| | ||
Sbjct: 59980 ccccagccttggcttgcaataccttctgcggggactatgctaaagcaagatggagtttta 60039
Query: 672 tgctccttttcaccttgcattgaacaagtacagcgtgcttgcgaaactatgaggtcttgt 731
|||||||| ||||| |||||||| ||||| ||||| ||||||||| ||||||| || |||
Sbjct: 60040 tgctccttctcaccctgcattgagcaagtgcagcgggcttgcgaagctatgagatcatgt 60099
Query: 732 ttcacag 738
|||||||
Sbjct: 60100 ttcacag 60106
Score = 129 bits (65), Expect = 3e-26
Identities = 140/165 (84%)
Strand = Plus / Plus
Query: 35 caagcccacctcgcagcgccgcatcgcggagggcgacaccgtcgtggtgtacgagcggca 94
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 58366 caagcccacctcccagcgccgcatcgcggagggggacaccgtcgtggtgtacgagcgcca 58425
Query: 95 cgactcgatgcgcgcagtcaccgtcagcgccgctggcgtactgcagaaccggttcggcgt 154
|||| | |||||||| ||| |||| | | | | ||| || |||||||| ||||||||
Sbjct: 58426 cgacgccatgcgcgccgtcgccgtgctcccgggggccgtgctccagaaccgattcggcgt 58485
Query: 155 atttcgccacgccgactggctcggccgccacttcggatccaaggt 199
|| ||||||| ||||||| ||||||||| |||||| | ||||||
Sbjct: 58486 cttccgccacgacgactggatcggccgccccttcggctgcaaggt 58530
Score = 89.7 bits (45), Expect = 2e-14
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 736 cagatattagaacttttgaaattcttctccgcacctatgaagtacatgaaggtgctctga 795
||||||||||||| |||||||||||||| |||||||||||||||| ||||||| | |||
Sbjct: 60795 cagatattagaacctttgaaattcttcttcgcacctatgaagtacgagaaggtggtttga 60854
Query: 796 agagtgcaaccaccaatgaag 816
|| |||| || ||||||||||
Sbjct: 60855 agggtgccacaaccaatgaag 60875
Score = 73.8 bits (37), Expect = 1e-09
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 902 tgttattgctaggccttgcagcacagctagaggacacactggctacttgacatttgc 958
|||||| | ||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 60961 tgttatggttaggccttgtagcactgctagaggacacactggctacctgacatttgc 61017
>emb|AL731634.4 |OSJN00276 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033P05,
complete sequence
Length = 120635
Score = 262 bits (132), Expect = 3e-66
Identities = 222/252 (88%)
Strand = Plus / Minus
Query: 243 ggcggcgggttcgtccacctcctcgcgccgaccccggagctctggacgctcgtgctcagc 302
||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||
Sbjct: 61905 ggcggcgggttcgtccacctccttgcgcccacccctgagctgtggacgctcgtgctcagc 61846
Query: 303 caccggacacagatcctctacattgccgatatcagcctcgtggtggcctacctcgagctc 362
|||||||| |||||||||||| | ||||| ||||||||||| || ||||||||||||||
Sbjct: 61845 caccggacgcagatcctctacctcgccgacatcagcctcgtcgtctcctacctcgagctc 61786
Query: 363 gtccctgggtgcgtcgtgctggagtccggaacggggagcggttcgctcaccacctcgcta 422
||||| |||||| |||| || |||||||| || |||||||| || ||||||||||||||
Sbjct: 61785 gtccccgggtgcctcgtactcgagtccggcaccgggagcggctccctcaccacctcgctc 61726
Query: 423 gcccgcgccgtcgcgccgcacgggcgggtgtacacgttcgatttccacgaccagagggca 482
|||||||||||||| |||||||| || || | ||| ||||||||||||||||| |||||
Sbjct: 61725 gcccgcgccgtcgccccgcacggccgcgtctgcaccttcgatttccacgaccaaagggcc 61666
Query: 483 gactcggcaagg 494
| ||| ||||||
Sbjct: 61665 gcctccgcaagg 61654
Score = 157 bits (79), Expect = 1e-34
Identities = 205/247 (82%)
Strand = Plus / Minus
Query: 492 agggaagattttgagaagaatggcctaagcagccttataacagttgctgttcaggacata 551
|||||||||||||||| ||||| ||| | |||| | || ||||| || |||| |||||||
Sbjct: 60627 agggaagattttgagaggaatgacctgaccagcataatcacagtcgcagttcgggacata 60568
Query: 552 caaggggaaggattcccagatgagtactctggagctgctgacgctgtgttcctggactta 611
||||| |||| ||||| || || || |||| ||||| || ||||||||| ||||||||
Sbjct: 60567 caaggacaagggttccctgaggaacacactggtgctgccgatgctgtgttcttggactta 60508
Query: 612 ccccagccttggctggcaataccgtcagctggtacaatgctacggcaagatggcatccta 671
|||||||||||||| |||||||| || || || || |||||| ||||||||| | ||
Sbjct: 60507 ccccagccttggcttgcaataccttctgcggggactatgctaaagcaagatggagtttta 60448
Query: 672 tgctccttttcaccttgcattgaacaagtacagcgtgcttgcgaaactatgaggtcttgt 731
|||||||| ||||| |||||||| ||||| ||||| ||||||||| ||||||| || |||
Sbjct: 60447 tgctccttctcaccctgcattgagcaagtgcagcgggcttgcgaagctatgagatcatgt 60388
Query: 732 ttcacag 738
|||||||
Sbjct: 60387 ttcacag 60381
Score = 137 bits (69), Expect = 1e-28
Identities = 141/165 (85%)
Strand = Plus / Minus
Query: 35 caagcccacctcgcagcgccgcatcgcggagggcgacaccgtcgtggtgtacgagcggca 94
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 62122 caagcccacctcccagcgccgcatcgcggagggggacaccgtcgtggtgtacgagcgcca 62063
Query: 95 cgactcgatgcgcgcagtcaccgtcagcgccgctggcgtactgcagaaccggttcggcgt 154
|||| | |||||||| ||| |||| || | | | ||| || |||||||| ||||||||
Sbjct: 62062 cgacgccatgcgcgccgtcgccgtgcgcccgggggccgtgctccagaaccgattcggcgt 62003
Query: 155 atttcgccacgccgactggctcggccgccacttcggatccaaggt 199
|| ||||||| ||||||| ||||||||| |||||| | ||||||
Sbjct: 62002 cttccgccacgacgactggatcggccgccccttcggctgcaaggt 61958
Score = 89.7 bits (45), Expect = 2e-14
Identities = 72/81 (88%)
Strand = Plus / Minus
Query: 736 cagatattagaacttttgaaattcttctccgcacctatgaagtacatgaaggtgctctga 795
||||||||||||| |||||||||||||| |||||||||||||||| ||||||| | |||
Sbjct: 59692 cagatattagaacctttgaaattcttcttcgcacctatgaagtacgagaaggtggtttga 59633
Query: 796 agagtgcaaccaccaatgaag 816
|| |||| || ||||||||||
Sbjct: 59632 agggtgccacaaccaatgaag 59612
Score = 73.8 bits (37), Expect = 1e-09
Identities = 52/57 (91%)
Strand = Plus / Minus
Query: 902 tgttattgctaggccttgcagcacagctagaggacacactggctacttgacatttgc 958
|||||| | ||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 59529 tgttatggttaggccttgtagcactgctagaggacacactggctacctgacatttgc 59473
>emb|CR855064.1 | Oryza sativa genomic DNA, chromosome 4, BAC clone: H0107B07,
complete sequence
Length = 92391
Score = 165 bits (83), Expect = 5e-37
Identities = 206/247 (83%)
Strand = Plus / Plus
Query: 492 agggaagattttgagaagaatggcctaagcagccttataacagttgctgttcaggacata 551
|||||||||||||||| ||||||||| | |||| | || ||||| || |||| |||||||
Sbjct: 491 agggaagattttgagaggaatggcctgaccagcataatcacagtcgcagttcgggacata 550
Query: 552 caaggggaaggattcccagatgagtactctggagctgctgacgctgtgttcctggactta 611
||||| |||| ||||| || || || |||| ||||| || ||||||||| ||||||||
Sbjct: 551 caaggacaagggttccctgaggaacacactggtgctgccgatgctgtgttcttggactta 610
Query: 612 ccccagccttggctggcaataccgtcagctggtacaatgctacggcaagatggcatccta 671
|||||||||||||| |||||||| || || || || |||||| ||||||||| | ||
Sbjct: 611 ccccagccttggcttgcaataccttctgcggggactatgctaaagcaagatggagtttta 670
Query: 672 tgctccttttcaccttgcattgaacaagtacagcgtgcttgcgaaactatgaggtcttgt 731
|||||||| ||||| |||||||| ||||| ||||| ||||||||| ||||||| || |||
Sbjct: 671 tgctccttctcaccctgcattgagcaagtgcagcgggcttgcgaagctatgagatcatgt 730
Query: 732 ttcacag 738
|||||||
Sbjct: 731 ttcacag 737
Score = 89.7 bits (45), Expect = 2e-14
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 736 cagatattagaacttttgaaattcttctccgcacctatgaagtacatgaaggtgctctga 795
||||||||||||| |||||||||||||| |||||||||||||||| ||||||| | |||
Sbjct: 1426 cagatattagaacctttgaaattcttcttcgcacctatgaagtacgagaaggtggtttga 1485
Query: 796 agagtgcaaccaccaatgaag 816
|| |||| || ||||||||||
Sbjct: 1486 agggtgccacaaccaatgaag 1506
Score = 73.8 bits (37), Expect = 1e-09
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 902 tgttattgctaggccttgcagcacagctagaggacacactggctacttgacatttgc 958
|||||| | ||||||||| ||||| ||||||||||||||||||||| ||||||||||
Sbjct: 1592 tgttatggttaggccttgtagcactgctagaggacacactggctacctgacatttgc 1648
>emb|AL732317.13 | Mouse DNA sequence from clone RP23-139F8 on chromosome 2, complete
sequence
Length = 222471
Score = 42.1 bits (21), Expect = 4.9
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 724 ggtcttgtttcacagatatta 744
|||||||||||||||||||||
Sbjct: 220186 ggtcttgtttcacagatatta 220206
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 190,805,253
Number of extensions: 9735989
Number of successful extensions: 179681
Number of sequences better than 10.0: 37
Number of HSP's gapped: 179681
Number of HSP's successfully gapped: 67
Length of query: 1282
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1259
Effective length of database: 18,503,978,556
Effective search space: 23296509002004
Effective search space used: 23296509002004
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)