ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf59k02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK064720:Os04g0386300 33 0.44
2AK120893:Os01g0772600 32 0.75
3AK069612:Os01g0772600 32 0.75
4AK067461:Os07g0492100 31 1.3
5AK111159: 30 2.9
6AK120823:Os01g0780600 30 3.7
7AK106156:Os04g0550700 30 3.7
8AK102796:Os06g0134000 30 3.7
9Os01g0503600:Os01g0503600 29 4.9
10Os08g0513700:Os08g0513700 29 6.4
11Os03g0110600:Os03g0110600 28 8.3
12AK109890:Os09g0432700 28 8.3
13AK068104:Os04g0656500 28 8.3
14AK065888:Os02g0725000 28 8.3
15AK061173:Os01g0814100 28 8.3
16AK059376:Os01g0814100 28 8.3

>AK064720:Os04g0386300 |
          Length = 169
 Score = 32.7 bits (73), Expect = 0.44
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +3

Query: 648 SPGVEGGGHATGRREDGGRGSAVRCQPDILGLR 746
           +PGV G G   G    G RG+ VR +P  LG R
Sbjct: 73  APGVRGAGEGDGAGGAGARGAGVRARPGDLGAR 105



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>AK120893:Os01g0772600 |
          Length = 698

 Score = 32.0 bits (71), Expect = 0.75
 Identities = 15/26 (57%), Positives = 15/26 (57%)
 Frame = +3

Query: 639 RNRSPGVEGGGHATGRREDGGRGSAV 716
           R R  G  GGG ATGR   GGRG  V
Sbjct: 41  RGRGRGGRGGGRATGRGRAGGRGRGV 66



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>AK069612:Os01g0772600 |
          Length = 698

 Score = 32.0 bits (71), Expect = 0.75
 Identities = 15/26 (57%), Positives = 15/26 (57%)
 Frame = +3

Query: 639 RNRSPGVEGGGHATGRREDGGRGSAV 716
           R R  G  GGG ATGR   GGRG  V
Sbjct: 41  RGRGRGGRGGGRATGRGRAGGRGRGV 66



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>AK067461:Os07g0492100 |
          Length = 1165

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 28/80 (35%), Positives = 30/80 (37%), Gaps = 5/80 (6%)
 Frame = -2

Query: 733 MSG*QRTADPLP-----PSSLLPVACPPPSTPGDRFLRVLLHLDLPPRIF*GIPLGHVCG 569
           MS  +  A PLP      SSLLP   PPPS P  +          PP      PL  V G
Sbjct: 1   MSRWKENASPLPLHPGGSSSLLPRKRPPPSPPPPQ----------PPCPPPRRPLADVTG 50

Query: 568 GT*RSRNLGPSAAGMGRHPP 509
              R R  G    G G   P
Sbjct: 51  NALRQRGSGGGGCGYGYSTP 70



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>AK111159: |
          Length = 928

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +2

Query: 467 RSASDGKTKRRKSKRRMPPH---TSCAGTQISAPSCAATYMTKGNASKNA 607
           R  S   ++R   KR +P H   TS  G+Q SAPS      ++ NAS  A
Sbjct: 209 RPDSSSSSQRLSDKRSIPSHMLGTSSRGSQTSAPSDLDYSHSRNNASPTA 258



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>AK120823:Os01g0780600 |
          Length = 425

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +3

Query: 600 KMRGGRSK*SKTLRNRSPGVEGGGHATGRREDGGRGSAV 716
           ++R GR +    LR        GGHATGR    GRG  V
Sbjct: 42  RLRRGRGRQECQLRRAVEWHRLGGHATGRGRRSGRGGGV 80



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>AK106156:Os04g0550700 |
          Length = 372

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -2

Query: 307 SPLLSSSHGLANARPTGTRRGRVCSPPGRCTVSCRSLGC 191
           SP +S S G   A   G R  R  SPP  C+++  S+GC
Sbjct: 55  SPAVSISSGSRPATRAGARALRAASPPPACSIA--SVGC 91



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>AK102796:Os06g0134000 |
          Length = 286

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 20/51 (39%), Positives = 22/51 (43%)
 Frame = +3

Query: 606 RGGRSK*SKTLRNRSPGVEGGGHATGRREDGGRGSAVRCQPDILGLRKLLS 758
           RG  S  SK     SP   GGG   G R  GGRG        I  L +LL+
Sbjct: 37  RGAASYHSKAAAFASPQPRGGGGGRGGRRGGGRGRGGDGSDRIDALGRLLT 87



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>Os01g0503600:Os01g0503600 |
          Length = 274

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 16/54 (29%), Positives = 23/54 (42%)
 Frame = +3

Query: 522 PIPAALGPKFLLLHVPPHT*PRGMPQKMRGGRSK*SKTLRNRSPGVEGGGHATG 683
           P+P A+         PP   P   P K++    +  + +R R  G EGGG   G
Sbjct: 218 PLPTAVPTTVHRSRPPPPPLPTTAPSKVKKETREGEREIRGRERGREGGGRREG 271



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>Os08g0513700:Os08g0513700 |
          Length = 1104

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = +3

Query: 627 SKTLRNRSPGVE---GGGHATGRREDGGRGSAVRCQPD 731
           SK +R+ SPG     GGG   G    GG GS   CQ D
Sbjct: 153 SKRVRSGSPGSASGGGGGGGGGGNSGGGGGSYPMCQVD 190



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>Os03g0110600:Os03g0110600 |
          Length = 481

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 523 GRHPPLAFSSLRLPVRRAPSASPVA 449
           GRHPP A ++   P    PS+SP A
Sbjct: 105 GRHPPAATATATAPSHPPPSSSPAA 129



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>AK109890:Os09g0432700 |
          Length = 78

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 230 RTTNPATPRACGACVCEPMGGRQKGRRQ 313
           RT     P AC  C C P G R++ RR+
Sbjct: 6   RTRAAPHPAACRPCSCSPTGVREEKRRE 33



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>AK068104:Os04g0656500 |
          Length = 416

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +2

Query: 461 CRRSASDGKTKRRKSKRRMPPHTSCAGTQISAPSCAATYMTKGNASKNA 607
           CR+  +D   +RRKSK     H S    +  A   AAT    G++SKNA
Sbjct: 246 CRKRLADHNRRRRKSKPSDGEH-SGEKRRAQANKSAATKDKAGSSSKNA 293



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>AK065888:Os02g0725000 |
          Length = 588

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +3

Query: 612 GRSK*SKTLRNRSPG-VEGGGHATGRREDGGRGSAVRCQP 728
           G S    T     PG   G    T R E G RGS+ RC+P
Sbjct: 108 GSSTSFHTCEGSGPGKASGSARMTDRSETGERGSSSRCRP 147



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>AK061173:Os01g0814100 |
          Length = 187

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -2

Query: 541 PSAAGMGRHPPLAFSSLRLPVRRAPSASPVA 449
           P   G+   P  A + L +PV  APSASP+A
Sbjct: 111 PGICGLAAPPVTACALLGVPVPMAPSASPMA 141



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>AK059376:Os01g0814100 |
          Length = 187

 Score = 28.5 bits (62), Expect = 8.3
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -2

Query: 541 PSAAGMGRHPPLAFSSLRLPVRRAPSASPVA 449
           P   G+   P  A + L +PV  APSASP+A
Sbjct: 111 PGICGLAAPPVTACALLGVPVPMAPSASPMA 141


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 29,838,569
Number of extensions: 703429
Number of successful extensions: 3161
Number of sequences better than 10.0: 16
Number of HSP's gapped: 3147
Number of HSP's successfully gapped: 16
Length of query: 351
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 249
Effective length of database: 11,315,673
Effective search space: 2817602577
Effective search space used: 2817602577
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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