| Clone Name | FLbaf59k02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Q3SY46:KR133_HUMAN Keratin-associated protein 13-3 - Homo sapien... | 33 | 2.0 | 2 | Q96DN6:MBD6_HUMAN Methyl-CpG-binding domain protein 6 - Homo sap... | 33 | 2.6 | 3 | Q5ZK74:ASHWN_CHICK Ashwin - Gallus gallus (Chicken) | 32 | 5.7 | 4 | O43157:PLXB1_HUMAN Plexin-B1 precursor - Homo sapiens (Human) | 31 | 7.5 |
|---|
>Q3SY46:KR133_HUMAN Keratin-associated protein 13-3 - Homo sapiens (Human)| Length = 172 Score = 33.1 bits (74), Expect = 2.0 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = +1 Query: 196 PNSCKTLCSGREDYKPCHAACLWGVRLRAHGRTTEGETSVRGIGAPATCRVRC 354 PNSC+TLC + PCH +C + RG G+ + C + C Sbjct: 63 PNSCQTLC---VESSPCHTSCYYPRTHMLCNSCLTMHVGSRGFGSNSCCSLSC 112
>Q96DN6:MBD6_HUMAN Methyl-CpG-binding domain protein 6 - Homo sapiens (Human)| Length = 1003 Score = 32.7 bits (73), Expect = 2.6 Identities = 32/89 (35%), Positives = 37/89 (41%), Gaps = 3/89 (3%) Frame = -2 Query: 715 TADPLPPSSLLPVACPPPSTPGDRFLRVLLHLDLPPRIF*GIPLGHVCGGT*RSRNLGPS 536 T PLPPS+ LP P S P +HL L G P G + S Sbjct: 268 TPPPLPPSNNLPAHPGPASQP--PVSSATMHLPLVLGPLGGAPTVEGPGAPPFLASSLLS 325 Query: 535 AAGMGRHPPLAFSSL---RLPVRRAPSAS 458 AA +HPPL S R P +APSAS Sbjct: 326 AAAKAQHPPLPPPSTLQGRRPRAQAPSAS 354
>Q5ZK74:ASHWN_CHICK Ashwin - Gallus gallus (Chicken)| Length = 241 Score = 31.6 bits (70), Expect = 5.7 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%) Frame = +2 Query: 467 RSASDGKTKRRKSKRRMPPHTSCAGT--QISAPSCAATYMTKGNASKNARRQVQMKQDPE 640 + +G T R K PP S T ++SAPS A+TY++ + S++A+ +V+ + + Sbjct: 126 KKTENGATDRLKP----PPAGSITNTVRRLSAPSNASTYISASSLSEDAKLEVRNNEAKQ 181 Query: 641 ESVS 652 ++S Sbjct: 182 NNIS 185
>O43157:PLXB1_HUMAN Plexin-B1 precursor - Homo sapiens (Human)| Length = 2135 Score = 31.2 bits (69), Expect = 7.5 Identities = 17/35 (48%), Positives = 19/35 (54%) Frame = -2 Query: 712 ADPLPPSSLLPVACPPPSTPGDRFLRVLLHLDLPP 608 A PL PS VA PP+ PG L + LDLPP Sbjct: 789 ASPLSPSE---VAAVPPADPGPEALHPTVPLDLPP 820 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 171,385,513 Number of extensions: 3639892 Number of successful extensions: 10691 Number of sequences better than 10.0: 4 Number of HSP's gapped: 10663 Number of HSP's successfully gapped: 4 Length of query: 351 Length of database: 100,686,439 Length adjustment: 114 Effective length of query: 237 Effective length of database: 69,416,809 Effective search space: 16451783733 Effective search space used: 16451783733 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)