>emb|AJ300144.1|HVU300144 Hordeum vulgare srg6 gene for stress responsive gene protein 6, exons
            1-11, cultivar Morex
          Length = 4197
 Score = 69.9 bits (35), Expect = 2e-08
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 832  tactccctctatgccacaatatttattgttggcgagagctagtttagttctcctcaccaa 891
            |||||||||| |||||||||| || ||||||| |||| ||| | |||||| || || |||
Sbjct: 1565 tactccctctgtgccacaatacttgttgttggggagaactaatctagttccccccaacaa 1506

                                   
Query: 892  caaatatgtaggaacagagggag 914
            ||| ||| |||||||||||||||
Sbjct: 1505 caagtatttaggaacagagggag 1483

>gb|AC191754.2| Pan troglodytes BAC clone CH251-424E19 from chromosome 1, complete
              sequence
          Length = 186102

 Score = 48.1 bits (24), Expect = 0.065
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 1015   aaaagggggtgaaataagaaaact 1038
              ||||||||||||||||||||||||
Sbjct: 114030 aaaagggggtgaaataagaaaact 114053

>ref|XM_001233006.1| PREDICTED: Gallus gallus hypothetical protein LOC769719
           (LOC769719), mRNA
          Length = 183

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 171 cggggcggcggcggccaagagc 192
           ||||||||||||||||||||||
Sbjct: 6   cggggcggcggcggccaagagc 27

>dbj|AK235861.1| Sus scrofa mRNA, clone:OVRM10121A07, expressed in ovary
          Length = 1326

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 482 gggaagacgaagagaagaaaaagcaa 507
           ||||||| ||||||||||||||||||
Sbjct: 729 gggaagaagaagagaagaaaaagcaa 754

>dbj|AK231522.1| Sus scrofa mRNA, clone:ITT010085E08, expressed in intestine
          Length = 1008

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 482 gggaagacgaagagaagaaaaagcaa 507
           ||||||| ||||||||||||||||||
Sbjct: 398 gggaagaagaagagaagaaaaagcaa 423

>ref|XM_848252.1| PREDICTED: Canis familiaris similar to Density-regulated protein
           (DRP) (DRP1 protein) (Smooth muscle cell associated
           protein-3) (SMAP-3) (LOC610709), mRNA
          Length = 1651

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 482 gggaagacgaagagaagaaaaagcaa 507
           ||||||| ||||||||||||||||||
Sbjct: 938 gggaagaggaagagaagaaaaagcaa 963

>gb|AC117756.8| Mus musculus chromosome 1, clone RP24-419N8, complete sequence
          Length = 174783

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 681   ggaagaagagaggacggaggaagagg 706
             ||||| ||||||||||||||||||||
Sbjct: 32125 ggaaggagagaggacggaggaagagg 32100

>gb|DQ381907.1| Aphis fabae fabae clone 1-TG-1/27 microsatellite sequences
          Length = 416

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 164 tcgtcgtcggggcggcggcggc 185
           ||||||||||||||||||||||
Sbjct: 237 tcgtcgtcggggcggcggcggc 216

>gb|AC084072.13| Mus musculus strain 129S6/SvEvTac clone rp22-511i2, complete sequence
          Length = 114579

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 604   tgcgaggaggcaggtccaaatg 625
             ||||||||||||||||||||||
Sbjct: 73897 tgcgaggaggcaggtccaaatg 73876

>emb|AL590434.16| Human DNA sequence from clone RP11-181E22 on chromosome 1 Contains the
             3' end of the gene for a novel protein, a novel
             pseudogene, the SFPQ gene for splicing factor
             proline/glutamine rich (polypyrimidine tract binding
             protein associated), the 5' end of the ZNF262 gene for
             zinc finger protein 262 and a CpG island, complete
             sequence
          Length = 185909

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1015  aaaagggggtgaaataagaaaa 1036
             ||||||||||||||||||||||
Sbjct: 89651 aaaagggggtgaaataagaaaa 89630

>gb|AC117766.6| Mus musculus chromosome 1, clone RP24-507L6, complete sequence
          Length = 190180

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 681  ggaagaagagaggacggaggaagagg 706
            ||||| ||||||||||||||||||||
Sbjct: 5098 ggaaggagagaggacggaggaagagg 5123

>gb|AY609734.1| Sus scrofa clone Clu_2820.scr.msk.p1.Contig1, mRNA sequence
          Length = 1304

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 482 gggaagacgaagagaagaaaaagcaa 507
           ||||||| ||||||||||||||||||
Sbjct: 364 gggaagaagaagagaagaaaaagcaa 389

>emb|BX072536.4| Mouse DNA sequence from clone RP23-5A21 on chromosome X, complete
             sequence
          Length = 246587

 Score = 44.1 bits (22), Expect = 1.0
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 604   tgcgaggaggcaggtccaaatg 625
             ||||||||||||||||||||||
Sbjct: 39533 tgcgaggaggcaggtccaaatg 39512

>gb|DQ244581.1| Zea mays clone 9410 mRNA sequence
          Length = 1031

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 454 ctggcgatgccgacggagcgc 474
           |||||||||||||||||||||
Sbjct: 338 ctggcgatgccgacggagcgc 358

>ref|XM_001069870.1| PREDICTED: Rattus norvegicus hypothetical protein LOC684323
           (LOC684323), mRNA
          Length = 456

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 681 ggaagaagagaggacggaggaagag 705
           |||||||||||||| ||||||||||
Sbjct: 201 ggaagaagagaggaaggaggaagag 225

>gb|AC112150.4| Mus musculus BAC clone RP24-84I17 from chromosome 16, complete sequence
          Length = 211640

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 483    ggaagacgaagagaagaaaaa 503
              |||||||||||||||||||||
Sbjct: 148464 ggaagacgaagagaagaaaaa 148444

>gb|AC145724.1| Pan troglodytes BAC clone RP43-22E12 from 7, complete sequence
          Length = 152426

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 682   gaagaagagaggacggaggaagagg 706
             ||||||||||||| |||||||||||
Sbjct: 60566 gaagaagagaggatggaggaagagg 60542

>gb|AC091736.2| Homo sapiens chromosome 7 clone RP11-644N4, complete sequence
          Length = 156539

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 682    gaagaagagaggacggaggaagagg 706
              ||||||||||||| |||||||||||
Sbjct: 120659 gaagaagagaggatggaggaagagg 120683

>emb|AL512427.10| Human DNA sequence from clone RP11-325M4 on chromosome 6 Contains a
              retinoblastoma binding protein 4 (RBBP4) pseudogene,
              complete sequence
          Length = 201657

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 612    ggcaggtccaaatgaagcaag 632
              |||||||||||||||||||||
Sbjct: 145232 ggcaggtccaaatgaagcaag 145252

>ref|NM_001009590.1| Danio rerio protocadherin 2 alpha b 11 (pcdh2ab11), mRNA
 dbj|AB075939.1| Danio rerio mRNA for cadherin-related neuronal receptor variable 11,
            complete cds
          Length = 3369

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 997  tgttttcagatttgaaataaa 1017
            |||||||||||||||||||||
Sbjct: 339  tgttttcagatttgaaataaa 359

>dbj|AB075928.1| Danio rerio CNR family (zCNRv1, zCNRv2, zCNRv3, zCNRv4, zCNRv5, zCNRv6,
             zCNRv7, zCNRv8, zCNRv9, zCNRv10, zCNRv11,zCNRv12, zCNRc)
             genes, complete cds
          Length = 116542

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 997   tgttttcagatttgaaataaa 1017
             |||||||||||||||||||||
Sbjct: 43598 tgttttcagatttgaaataaa 43618

>gb|AC012087.10|AC012087 Homo sapiens 3 BAC RP11-317L10,RP11-150K6,RP11-68D12 (Roswell Park Cancer
              Institute Human BAC Library) complete sequence
          Length = 194635

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    ggcggcggcggccaagagcag 194
              |||||||||||||||||||||
Sbjct: 123768 ggcggcggcggccaagagcag 123748

>gb|S37458.1|S37458 thyroid hormone receptor beta 1 {promoter} [human, placenta, Genomic,
            1996 nt]
          Length = 1996

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 174  ggcggcggcggccaagagcag 194
            |||||||||||||||||||||
Sbjct: 1106 ggcggcggcggccaagagcag 1086

>emb|CT010517.11| Mouse DNA sequence from clone RP23-357P12 on chromosome 16, complete
            sequence
          Length = 188228

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 483  ggaagacgaagagaagaaaaa 503
            |||||||||||||||||||||
Sbjct: 9770 ggaagacgaagagaagaaaaa 9790

>gb|M86845.1|ONGMISCDIF Onchocerca volvulus DNA sequence
          Length = 4085

 Score = 42.1 bits (21), Expect = 4.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 786  tcttttgcttttcttattaca 806
            |||||||||||||||||||||
Sbjct: 3000 tcttttgcttttcttattaca 2980


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 182,391,889
Number of extensions: 10397126
Number of successful extensions: 212474
Number of sequences better than 10.0: 25
Number of HSP's gapped: 212474
Number of HSP's successfully gapped: 25
Length of query: 1055
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1032
Effective length of database: 18,503,978,556
Effective search space: 19096105869792
Effective search space used: 19096105869792
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)