ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf59h07 |
|---|---|
| Clone Library Name | barley_pub |
>Q91W34:CP058_MOUSE UPF0420 protein C16orf58 homolog - Mus musculus (Mouse)| Length = 466 Score = 84.7 bits (208), Expect(2) = 3e-28 Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 3/164 (1%) Frame = +1 Query: 280 AGGGGGVSVKLVQDNRMAHDKLVDSFLNKFFPSGYPYSVNEGYLTYTKFRALQHFSSAML 459 AGGGGG L + + P G+P SV+ YL Y + ++Q F+S++ Sbjct: 55 AGGGGGPWAALTA---------LSGLRSVLLPQGFPDSVSPDYLPYQLWDSVQAFASSLS 105 Query: 460 HVLSTQSLLFAAGLRPTPAQATAVS--WILKDGMQHAGKLICSGM-GARMDSEPKSWRIF 630 L+TQ++L G+ A +A + W++KD G++I + G+++D K WR+F Sbjct: 106 GSLATQAVLQGLGVGNAKASVSAATSTWLVKDSTGMLGRIILAWWKGSKLDCNAKQWRLF 165 Query: 631 ADVLYDFGTALDFISPLCPQLFLEVAGLGNFAKGMAVVAARATR 762 AD+L D L+ ++P+ P F N AK + VA ATR Sbjct: 166 ADILNDVAMFLEIMAPMYPIFFTMTVSTSNLAKCIVGVAGGATR 209 Score = 62.8 bits (151), Expect(2) = 3e-28 Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 24/235 (10%) Frame = +3 Query: 783 AKEGNLSDLFAKGEAISTLFNVMGIGAGIGLSSTVCSTTQGKLIIGPLLSAVHIWGVVQE 962 A+ N++D+ AK + T+ N+ G+ + + V L LL+A+HI+ + Sbjct: 217 ARRNNMADVSAKDSSQETVVNLAGLLVSLLMLPLVSDCPSLSLGCFVLLTALHIYANYRA 276 Query: 963 MRATPINTLNPQRTAMVVADFIKSGKVSSPAELRYREDL---LFPNRLIEEAGSVKVGQP 1133 +RA + TLN R +V+ F++ G+V PA E L +P+ S+ +G P Sbjct: 277 VRALVLETLNESRLQLVLEHFLQRGEVLEPASANQMEPLWTGFWPSL------SLSLGVP 330 Query: 1134 LRRVLSPRDVEQLRSTFP--KEKFLLA--QKGDKAYMVLEQSATGEDALR----GWLVAA 1289 L ++S V +L+ E +LL + ++ + L Q A E LR G ++ A Sbjct: 331 LHHLVS--SVSELKQLVEGHHEPYLLCWNKSRNQVQVALSQEAGPETVLRAATHGLILGA 388 Query: 1290 LASEMERSG--AGSRDAV-----------LNDAYQKMESVFPMFVSEVKSRGWYT 1415 L + G A R V + + +Q ++++FP F+ +++ GW T Sbjct: 389 LQEDGPLPGELAELRHQVQADPKKESWILVRETHQVLDTLFPKFLKGLQAAGWKT 443
>Q499P8:CP058_RAT UPF0420 protein C16orf58 homolog - Rattus norvegicus (Rat)| Length = 466 Score = 80.5 bits (197), Expect(2) = 4e-28 Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 3/133 (2%) Frame = +1 Query: 373 PSGYPYSVNEGYLTYTKFRALQHFSSAMLHVLSTQSLLFAAGLRPTPAQATAVS--WILK 546 P G+P SV+ YL Y + ++Q F+S++ L+TQ++L G+ A +A + W++K Sbjct: 77 PQGFPDSVSPDYLQYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWLVK 136 Query: 547 DGMQHAGKLICSGM-GARMDSEPKSWRIFADVLYDFGTALDFISPLCPQLFLEVAGLGNF 723 D G++I + G+++D K WR+FAD+L D L+ ++P+ P F N Sbjct: 137 DSTGMLGRIIFAWWKGSKLDCNAKQWRLFADILNDTAMFLEIMAPMYPIFFTMTVSTSNL 196 Query: 724 AKGMAVVAARATR 762 AK + VA ATR Sbjct: 197 AKCIVGVAGGATR 209 Score = 66.6 bits (161), Expect(2) = 4e-28 Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 24/235 (10%) Frame = +3 Query: 783 AKEGNLSDLFAKGEAISTLFNVMGIGAGIGLSSTVCSTTQGKLIIGPLLSAVHIWGVVQE 962 A+ N++D+ AK + T+ N+ G+ + + V L LL+A+HI+ + Sbjct: 217 ARRNNMADVSAKDSSQETVVNLAGLLVSLLMLPLVSDCLSLSLGCFILLTALHIYANYRA 276 Query: 963 MRATPINTLNPQRTAMVVADFIKSGKVSSPAELRYREDL---LFPNRLIEEAGSVKVGQP 1133 +RA + TLN R +V+ F++ G+V PA E L +P+ S+ +G P Sbjct: 277 VRALVLETLNESRLQLVLKHFLQRGEVLEPASANQMEPLWTGFWPSL------SLSLGVP 330 Query: 1134 LRRVLSPRDVEQLRSTFP--KEKFLLA--QKGDKAYMVLEQSATGEDALR----GWLVAA 1289 L ++S V +L+ +E +LL Q ++ + L Q A E LR G ++ A Sbjct: 331 LHHLVS--SVSELKQLVEGHQEPYLLCWNQSQNQVQVALSQVAGPETVLRAATHGLILGA 388 Query: 1290 LASEMERSG--AGSRDAV-----------LNDAYQKMESVFPMFVSEVKSRGWYT 1415 L + G A RD V + + +Q ++++FP F+ +++ GW T Sbjct: 389 LQEDGPLPGELAELRDMVQAGPKNESWILVRETHQVLDTLFPKFLKGLQAAGWKT 443
>Q96GQ5:CP058_HUMAN UPF0420 protein C16orf58 - Homo sapiens (Human)| Length = 468 Score = 83.6 bits (205), Expect(2) = 6e-28 Identities = 47/136 (34%), Positives = 78/136 (57%), Gaps = 4/136 (2%) Frame = +1 Query: 367 FFPSGYPYSVNEGYLTYTKFRALQHFSSAMLHVLSTQSLLFAAGL---RPTPAQATAVSW 537 F P G+P SV+ YL Y + ++Q F+S++ L+TQ++L G+ + T + ATA +W Sbjct: 77 FLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATA-TW 135 Query: 538 ILKDGMQHAGKLICSGM-GARMDSEPKSWRIFADVLYDFGTALDFISPLCPQLFLEVAGL 714 ++KD G+++ + G+++D K WR+FAD+L D L+ ++P+ P F Sbjct: 136 LVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVST 195 Query: 715 GNFAKGMAVVAARATR 762 N AK + VA ATR Sbjct: 196 SNLAKCIVSVAGGATR 211 Score = 62.8 bits (151), Expect(2) = 6e-28 Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 22/233 (9%) Frame = +3 Query: 783 AKEGNLSDLFAKGEAISTLFNVMGIGAGIGLSSTVCSTTQGKLIIGPLLSAVHIWGVVQE 962 A+ N++D+ AK + TL N+ G+ + + V L L+A+HI+ + Sbjct: 219 ARRNNMADVSAKDSSQETLVNLAGLLVSLLMLPLVSGCPGFSLGCFFFLTALHIYANYRA 278 Query: 963 MRATPINTLNPQRTAMVVADFIKSGKVSSPAELRYREDL---LFPNRLIEEAGSVKVGQP 1133 +RA + TLN R +V+ +++ G+V P E L +P A S+ +G P Sbjct: 279 VRALVMETLNEGRLRLVLKHYLQRGEVLDPTAANRMEPLWTGFWP------APSLSLGVP 332 Query: 1134 LRRVLSPRDVEQLRSTFPKEKFLLA--QKGDKAYMVLEQSATGEDALR------------ 1271 L R++S Q +E +LL Q ++ +VL Q A + LR Sbjct: 333 LHRLVSSVFELQQLVEGHQESYLLCWDQSQNQVQVVLNQKAGPKTILRAATHGLMLGALQ 392 Query: 1272 --GWLVAALASEMERSGAGSRD---AVLNDAYQKMESVFPMFVSEVKSRGWYT 1415 G L A L R AG + V+ + ++ ++ +FP F+ ++ GW T Sbjct: 393 GDGPLPAELEELRNRVRAGPKKESWVVVKETHEVLDMLFPKFLKGLQDAGWKT 445
>Q5R8F6:CP058_PONPY UPF0420 protein C16orf58 homolog - Pongo pygmaeus (Orangutan)| Length = 468 Score = 83.2 bits (204), Expect(2) = 6e-28 Identities = 47/136 (34%), Positives = 77/136 (56%), Gaps = 4/136 (2%) Frame = +1 Query: 367 FFPSGYPYSVNEGYLTYTKFRALQHFSSAMLHVLSTQSLLFAAGL---RPTPAQATAVSW 537 F P G+P SV+ YL Y + ++Q F+S + L+TQ++L G+ + T + ATA +W Sbjct: 77 FLPQGFPDSVSPDYLPYQLWDSVQAFASGLSGSLATQAVLLGIGVGNAKATVSAATA-TW 135 Query: 538 ILKDGMQHAGKLICSGM-GARMDSEPKSWRIFADVLYDFGTALDFISPLCPQLFLEVAGL 714 ++KD G+++ + G+++D K WR+FAD+L D L+ ++P+ P F Sbjct: 136 LVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVST 195 Query: 715 GNFAKGMAVVAARATR 762 N AK + VA ATR Sbjct: 196 SNLAKCIVSVAGGATR 211 Score = 63.2 bits (152), Expect(2) = 6e-28 Identities = 59/233 (25%), Positives = 105/233 (45%), Gaps = 22/233 (9%) Frame = +3 Query: 783 AKEGNLSDLFAKGEAISTLFNVMGIGAGIGLSSTVCSTTQGKLIIGPLLSAVHIWGVVQE 962 A+ N++D+ AK + TL N++G+ + + V L L+A+HI+ + Sbjct: 219 ARRNNMADVSAKDSSQETLVNLVGLLVSLLMLPLVSGCPGFSLGCFFFLTALHIYANYRA 278 Query: 963 MRATPINTLNPQRTAMVVADFIKSGKVSSPAELRYREDL---LFPNRLIEEAGSVKVGQP 1133 +RA + TLN R +V+ +++ G+V +P E L +P A S+ +G P Sbjct: 279 VRALVMETLNEGRLRLVLKHYLQRGEVLNPTAANRMEPLWTGFWP------APSLSLGVP 332 Query: 1134 LRRVLSPRDVEQLRSTFPKEKFLLA--QKGDKAYMVLEQSATGEDALR------------ 1271 L R++S Q +E +LL Q ++ +VL Q A + LR Sbjct: 333 LHRLVSSVFELQQLVEGHQEPYLLCWDQSRNQVQVVLNQKAGPKTILRAATHGLMLGALQ 392 Query: 1272 --GWLVAALASEMERSGAGSRD---AVLNDAYQKMESVFPMFVSEVKSRGWYT 1415 G L A L R AG + ++ + ++ ++ +FP F+ ++ GW T Sbjct: 393 GDGPLPAELEELRNRVQAGPKKESWVIVKETHEVLDMLFPKFLKGLQDAGWKT 445
>P20186:YT35_STRFR Hypothetical 35.5 kDa protein in transposon Tn4556 - Streptomyces| fradiae Length = 348 Score = 36.6 bits (83), Expect = 0.35 Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 14/121 (11%) Frame = -3 Query: 1482 PACAVIRISRMRSGCDS---------HPRTGPCTSPCSSLPKRTWGTR-----SPSSDRR 1345 PA R S R+GC + P +SP ++ P TR +PS+ R Sbjct: 210 PAPLAARCSASRAGCPTAAGSLLPAPRPPASSASSPQAAAPAAPSATRLPRRTTPSAPRP 269 Query: 1344 HSGRRRAIQHLISPSPKPRQRPATPEAHPLRLRSAQGPCKPCRLFGRVEISPLGR*TSAV 1165 S R A + + P PR+ P TP R R+ G C P R R +P R A Sbjct: 270 SS--RPARPPIPAARPPPRRTPGTPRPAAARARAPAG-CSPAR---RTPSAPTDRRCRAA 323 Query: 1164 R 1162 R Sbjct: 324 R 324
>Q14003:KCNC3_HUMAN Potassium voltage-gated channel subfamily C member 3 - Homo sapiens| (Human) Length = 757 Score = 36.6 bits (83), Expect = 0.35 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%) Frame = +2 Query: 11 KRSWSPRPQRPANPHPFPLPPRRRQPA--AVSV*PAGP 118 K+ +P PQ P +P P PLPP+++QPA + PAGP Sbjct: 18 KQQPAPPPQPPESPPPPPLPPQQQQPAQPGPAASPAGP 55
>Q9QZA2:PDC6I_RAT Programmed cell death 6-interacting protein - Rattus norvegicus| (Rat) Length = 401 Score = 36.2 bits (82), Expect = 0.45 Identities = 22/53 (41%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Frame = +2 Query: 8 PKRSWSPRPQRPANPHPFPLPPRRRQPAAVSV*PAGPKEEDEASPH--GVAPP 160 P+ +PQ PA P P LP R PAA + PAG A P G APP Sbjct: 276 PRTMPPAKPQPPARPPPPVLPANRVPPAAAATAPAGVGTASAAPPQTPGSAPP 328
>Q52KI8:SRRM1_MOUSE Serine/arginine repetitive matrix protein 1 - Mus musculus (Mouse)| Length = 946 Score = 35.8 bits (81), Expect = 0.59 Identities = 35/101 (34%), Positives = 40/101 (39%), Gaps = 6/101 (5%) Frame = -3 Query: 1509 RRDAPPALHPACAVIRISRMRSGCDSHPRTGPCTSPC---SSLPKRTWGTRSPSSDRRHS 1339 RR P+ PA R RS + P P P S P T SP RR Sbjct: 557 RRRRSPSPPPA------RRRRSPSPAPPPPPPPPPPRRRRSPTPPPRRRTPSPPPRRRSP 610 Query: 1338 GRRR---AIQHLISPSPKPRQRPATPEAHPLRLRSAQGPCK 1225 RR IQ SPSP P++R A+P P R S P K Sbjct: 611 SPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPK 651
>Q5ZMJ9:SRRM1_CHICK Serine/arginine repetitive matrix protein 1 - Gallus gallus (Chicken)| Length = 888 Score = 35.4 bits (80), Expect = 0.77 Identities = 34/108 (31%), Positives = 41/108 (37%), Gaps = 10/108 (9%) Frame = -3 Query: 1509 RRDAPPALH-----PACAVIRISRMRSGCDSHPRTGPCTSPCSSLPKRTWG-----TRSP 1360 RR PP H P R S SG S + SP PKRT TR Sbjct: 326 RRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTVSSPPRKTRRL 385 Query: 1359 SSDRRHSGRRRAIQHLISPSPKPRQRPATPEAHPLRLRSAQGPCKPCR 1216 S RR SP PKPR+ P +++ R R ++G P R Sbjct: 386 SPSASPPRRRHRPSPPASPPPKPRRSPTPQQSN--RARKSRGSVSPGR 431 Score = 33.5 bits (75), Expect = 2.9 Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 3/54 (5%) Frame = -3 Query: 1395 SLPKRTWGTRSPSSDRRHSGRRR---AIQHLISPSPKPRQRPATPEAHPLRLRS 1243 SLP+R + SP RR RR IQ SPSP P++R A+P P R S Sbjct: 568 SLPRRR--SPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRAS 619
>Q5R5Q2:SRRM1_PONPY Serine/arginine repetitive matrix protein 1 - Pongo pygmaeus| (Orangutan) Length = 917 Score = 35.0 bits (79), Expect = 1.0 Identities = 31/90 (34%), Positives = 37/90 (41%), Gaps = 12/90 (13%) Frame = -3 Query: 1458 SRMRSGCDSHPRTGPCTSPCSSLPKRTWGTRSPSSDRRHSG---RRRA---------IQH 1315 S R S P T SP + P R T +P RR RRR+ IQ Sbjct: 557 SGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQR 616 Query: 1314 LISPSPKPRQRPATPEAHPLRLRSAQGPCK 1225 SPSP P++R A+P P R S P K Sbjct: 617 RYSPSPPPKRRTASPPPPPKRRASPSPPPK 646
>P11994:SM50_STRPU 50 kDa spicule matrix protein precursor - Strongylocentrotus| purpuratus (Purple sea urchin) Length = 445 Score = 35.0 bits (79), Expect = 1.0 Identities = 19/54 (35%), Positives = 22/54 (40%) Frame = +2 Query: 2 MRPKRSWSPRPQRPANPHPFPLPPRRRQPAAVSV*PAGPKEEDEASPHGVAPPW 163 M P RSW PQ P + P P +RQ P P + P GV P W Sbjct: 133 MPPTRSWPVNPQNPMSGPPGRAPVMKRQNP-----PVRPGQGGRQIPQGVGPQW 181
>Q9WU78:PDC6I_MOUSE Programmed cell death 6-interacting protein - Mus musculus (Mouse)| Length = 869 Score = 35.0 bits (79), Expect = 1.0 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Frame = +2 Query: 8 PKRSWSPRPQRPANPHPFPLPPRRRQPAAVSV*PAGPKEEDEASPH--GVAPP 160 P+ +PQ PA P P LP R PA+ + PAG A P G APP Sbjct: 744 PRTMPPAKPQPPARPPPPVLPANRVPPASAAAAPAGVGTASAAPPQTPGSAPP 796
>Q8IYB3:SRRM1_HUMAN Serine/arginine repetitive matrix protein 1 - Homo sapiens (Human)| Length = 904 Score = 34.7 bits (78), Expect = 1.3 Identities = 29/82 (35%), Positives = 35/82 (42%), Gaps = 12/82 (14%) Frame = -3 Query: 1434 SHPRTGPCTSPCSSLPKRTWGTRSPSSDRRHSG---RRRA---------IQHLISPSPKP 1291 S P T SP + P R T +P RR RRR+ IQ SPSP P Sbjct: 551 SPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPP 610 Query: 1290 RQRPATPEAHPLRLRSAQGPCK 1225 ++R A+P P R S P K Sbjct: 611 KRRTASPPPPPKRRASPSPPPK 632
>Q96J02:ITCH_HUMAN E3 ubiquitin-protein ligase Itchy homolog - Homo sapiens (Human)| Length = 903 Score = 34.7 bits (78), Expect = 1.3 Identities = 21/57 (36%), Positives = 30/57 (52%) Frame = +2 Query: 29 RPQRPANPHPFPLPPRRRQPAAVSV*PAGPKEEDEASPHGVAPPWTYSRKFAEAATN 199 +P RP P P PP R+PA+V+ P+ E D +S G PP + +E AT+ Sbjct: 249 KPSRPPRPSR-PPPPTPRRPASVNGSPSATSESDGSST-GSLPPTNTNTNTSEGATS 303
>Q9FPQ6:GP1_CHLRE Vegetative cell wall protein gp1 precursor - Chlamydomonas| reinhardtii Length = 555 Score = 34.3 bits (77), Expect = 1.7 Identities = 19/46 (41%), Positives = 19/46 (41%) Frame = +2 Query: 23 SPRPQRPANPHPFPLPPRRRQPAAVSV*PAGPKEEDEASPHGVAPP 160 SP P PA P P P P PA S P P SP APP Sbjct: 90 SPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPP 135 Score = 32.0 bits (71), Expect = 8.5 Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = +2 Query: 23 SPRPQRPANPHPFPLPPRRRQPAAVSV*PAGPKEEDEA--SPHGVAPP 160 SP P PA P P P P PA S P P A SP APP Sbjct: 80 SPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPP 127 Score = 32.0 bits (71), Expect = 8.5 Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 1/47 (2%) Frame = +2 Query: 23 SPRPQRPANP-HPFPLPPRRRQPAAVSV*PAGPKEEDEASPHGVAPP 160 SP P PA P P P PP P S P P SP APP Sbjct: 188 SPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPP 234
>Q566L4:ZN703_XENTR Zinc finger protein 703 - Xenopus tropicalis (Western clawed frog)| (Silurana tropicalis) Length = 537 Score = 33.9 bits (76), Expect = 2.2 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 2/68 (2%) Frame = -1 Query: 332 AILLSWTSLTDTPPPPPASKLQSRETDSEISTQDSGFRGVSIPAGLSP--PPRIFSSMSM 159 A+L S P PPP+SKL S T S +S ++SG R S+ G SP F S Sbjct: 83 ALLAQTCSQIGKPDPPPSSKLNS-VTSSGLSEKESG-RSSSLKLGESPLEDKSSFKPYSK 140 Query: 158 GARRREDS 135 G R++S Sbjct: 141 GGESRKES 148
>P41654:PUR6_METTH Probable phosphoribosylaminoimidazole carboxylase - Methanobacterium| thermoautotrophicum Length = 334 Score = 33.9 bits (76), Expect = 2.2 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%) Frame = -2 Query: 1027 MKSATTIAVLCGLSVFIGVALISCTTPHICTAESNGPMISFP*VVEHTVDD-----NPMP 863 +K+ + AV G+ VFIG+A +S P + +A ++ P+I P V+ D + MP Sbjct: 46 VKAIVSEAVKAGVEVFIGIAGLSAHLPGMISANTHRPVIGVPVDVKLGGLDALFACSQMP 105 Query: 862 APIPITLKSVE 830 P P+ V+ Sbjct: 106 FPAPVATVGVD 116
>Q6AX33:MAST3_XENLA Microtubule-associated serine/threonine-protein kinase 3 - Xenopus| laevis (African clawed frog) Length = 1482 Score = 33.9 bits (76), Expect = 2.2 Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 16/90 (17%) Frame = -3 Query: 1410 TSPCSSLPKRTWGTRSPSS----------DRRHSGRRRAIQHL------ISPSPKPRQRP 1279 TSPCSS P G PSS R GRR++ + +PSP P Q+P Sbjct: 1159 TSPCSSTPSSPAGHIRPSSLQCLTPKLSGQRYKVGRRKSTSSIPPSPLACTPSPVP-QQP 1217 Query: 1278 ATPEAHPLRLRSAQGPCKPCRLFGRVEISP 1189 ++P+ P L + C L G+ +SP Sbjct: 1218 SSPQRSPSPLLPSHPRSGHCGLQGKT-LSP 1246
>Q9UKJ3:GPTC8_HUMAN G patch domain-containing protein 8 - Homo sapiens (Human)| Length = 1089 Score = 33.5 bits (75), Expect = 2.9 Identities = 27/77 (35%), Positives = 32/77 (41%) Frame = -3 Query: 1455 RMRSGCDSHPRTGPCTSPCSSLPKRTWGTRSPSSDRRHSGRRRAIQHLISPSPKPRQRPA 1276 R RS R+ S S KR+WG SP + RHSGRR I+ I S P Sbjct: 571 RSRSYSRDRSRSTRSPSQRSGSRKRSWGHESP--EERHSGRRDFIRSKIYRSQSP----- 623 Query: 1275 TPEAHPLRLRSAQGPCK 1225 H R +GP K Sbjct: 624 ----HYFRSGRGEGPGK 636
>Q9PRA1:Y044_UREPA Uncharacterized protein UU044 - Ureaplasma parvum (Ureaplasma| urealyticum biotype 1) Length = 782 Score = 33.1 bits (74), Expect = 3.8 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = +2 Query: 5 RPKRSWSPRPQRPANPHPFPLPPRRRQPAAVSV*PAGPKEED---EASPHGVAPP 160 +PK P+PQ P P P PP++ + + P PK+ + E P + P Sbjct: 76 KPKPQPKPKPQPTPFPDPIPTPPKKEELKKPDIKPEEPKKPEIKPEPKPEPIPQP 130
>Q26264:SM41_HEMPU 41 kDa spicule matrix protein precursor - Hemicentrotus| pulcherrimus (Sea urchin) Length = 407 Score = 33.1 bits (74), Expect = 3.8 Identities = 17/52 (32%), Positives = 21/52 (40%) Frame = +2 Query: 8 PKRSWSPRPQRPANPHPFPLPPRRRQPAAVSV*PAGPKEEDEASPHGVAPPW 163 P R+W PQ P + P P +RQ P P + P GV P W Sbjct: 135 PSRAWPVNPQNPMSGPPGRAPVMKRQNP-----PVRPGQGGRQIPQGVGPQW 181
>O88942:NFAC1_MOUSE Nuclear factor of activated T-cells, cytoplasmic 1 - Mus musculus| (Mouse) Length = 717 Score = 33.1 bits (74), Expect = 3.8 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 8/58 (13%) Frame = -3 Query: 1428 PRTGPCTSPCSSLPKRTW----GTR--SPSSDRRHS--GRRRAIQHLISPSPKPRQRP 1279 PR P TSP +S+ + +W G+R SP + R++S GR+ + SP+P P P Sbjct: 236 PRHSPSTSPRASITEESWLGARGSRPTSPCNKRKYSLNGRQPSCSPHHSPTPSPHGSP 293
>Q8JZP9:GA2L1_MOUSE GAS2-like protein 1 - Mus musculus (Mouse)| Length = 678 Score = 33.1 bits (74), Expect = 3.8 Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 1/79 (1%) Frame = -3 Query: 1413 CTSPCSSLPKRTWGTRSPSSDRRHSGRRRAIQHLISPSPKPRQRPATPEAHPLRLR-SAQ 1237 C+S LP++ GT SP R SP P +R + PE P+ LR + + Sbjct: 276 CSSSTHRLPQQRTGTFSPQRGSPTPSPRPG-----SPVPGSERRSSRPEVTPISLRGTKE 330 Query: 1236 GPCKPCRLFGRVEISPLGR 1180 GP P R R ++ PL R Sbjct: 331 GPETPLR--PRDQLPPLPR 347
>Q83PZ0:FMT_SHIFL Methionyl-tRNA formyltransferase - Shigella flexneri| Length = 315 Score = 33.1 bits (74), Expect = 3.8 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 8/49 (16%) Frame = +1 Query: 1210 KKATRLTWSLSRAQPER-MRFGGGWSLPWL-------RRWRDQVLDRAT 1332 K+ R+ WSLS AQ ER +R W + WL + W+ V+D AT Sbjct: 210 KEEARIDWSLSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASVIDTAT 258
>P23882:FMT_ECOLI Methionyl-tRNA formyltransferase - Escherichia coli| Length = 315 Score = 33.1 bits (74), Expect = 3.8 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 8/49 (16%) Frame = +1 Query: 1210 KKATRLTWSLSRAQPER-MRFGGGWSLPWL-------RRWRDQVLDRAT 1332 K+ R+ WSLS AQ ER +R W + WL + W+ V+D AT Sbjct: 210 KEEARIDWSLSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASVIDTAT 258
>Q5SH37:SLAP1_THET8 S-layer protein precursor - Thermus thermophilus (strain HB8 / ATCC| 27634 / DSM 579) Length = 928 Score = 32.7 bits (73), Expect = 5.0 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 2/104 (1%) Frame = +3 Query: 1062 RYREDLLFPNRL--IEEAGSVKVGQPLRRVLSPRDVEQLRSTFPKEKFLLAQKGDKAYMV 1235 RY+ LL L IEE + P L+P D+E L++ + LA G + + Sbjct: 63 RYQAALLIYRLLQQIEEELKTQGTSPTMEALAPEDLEALKNAVQELAAELASLGVRVSAL 122 Query: 1236 LEQSATGEDALRGWLVAALASEMERSGAGSRDAVLNDAYQKMES 1367 + +AT ED R + A G A L D ++E+ Sbjct: 123 EDSAATKEDIARLEAMIAELKAQPMPEPGMDQAALKDLMDRVEA 166
>P78957:RE114_SACPS Meiotic recombination protein REC114 - Saccharomyces pastorianus| (Lager yeast) (Saccharomyces carlsbergensis) Length = 431 Score = 32.7 bits (73), Expect = 5.0 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 8/55 (14%) Frame = -2 Query: 895 VEHTVDDNPMP--------APIPITLKSVEMASPLANKSLRLPSLAKDDISVALS 755 VEH D P AP P+++K +E + PL+NKS P+ K++ + A+S Sbjct: 225 VEHFSQDLNTPSATQTIPIAPEPLSVKLLEASPPLSNKSRHSPTTKKENRNTAIS 279
>P49695:PKWA_THECU Probable serine/threonine-protein kinase pkwA - Thermomonospora| curvata Length = 742 Score = 32.7 bits (73), Expect = 5.0 Identities = 18/48 (37%), Positives = 24/48 (50%) Frame = +2 Query: 32 PQRPANPHPFPLPPRRRQPAAVSV*PAGPKEEDEASPHGVAPPWTYSR 175 P+RPA P PPR R+PA ++ P P+ P PPW+ R Sbjct: 354 PERPA-----PTPPRPREPARGAIKPKNPR------PAAPQPPWSPPR 390
>P45575:DSVB_DESVH Sulfite reductase, dissimilatory-type subunit beta - Desulfovibrio| vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) Length = 381 Score = 32.7 bits (73), Expect = 5.0 Identities = 13/53 (24%), Positives = 24/53 (45%) Frame = -1 Query: 605 ESILAPMPLHMSFPACCIPSFRIQLTAVACAGVGRRPAANNKDWVDNTCSIAL 447 +S+ P P+ +S C + + + G+ R+P + +W D C I L Sbjct: 174 QSMRLPAPVRISLACCINMCGAVHCSDIGVVGIHRKPPMIDHEWTDQLCEIPL 226
>Q9PR99:Y046_UREPA Uncharacterized protein UU046 - Ureaplasma parvum (Ureaplasma| urealyticum biotype 1) Length = 791 Score = 32.3 bits (72), Expect = 6.5 Identities = 16/52 (30%), Positives = 23/52 (44%) Frame = +2 Query: 5 RPKRSWSPRPQRPANPHPFPLPPRRRQPAAVSV*PAGPKEEDEASPHGVAPP 160 +PK P PQ P P P PP++ + + P PK + E P + P Sbjct: 76 KPKPQPKPEPQPTPFPDPIPTPPKKEELKKPEIKPEEPK-KPEIKPEPIPKP 126
>O75764:TCEA3_HUMAN Transcription elongation factor A protein 3 - Homo sapiens (Human)| Length = 348 Score = 32.3 bits (72), Expect = 6.5 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Frame = -1 Query: 371 KNLFKKESTNLSCAILLSWTSLTDTPPPPPASKLQSRE--TDSEISTQDSGFRGVSIPAG 198 K+ KE +L+ ++ +W L D+P PP K + RE E + S ++ AG Sbjct: 57 KHCSDKEVVSLAKVLIKNWKRLLDSPGPPKGEKGEEREKAKKKEKGLECSDWKP---EAG 113 Query: 197 LSPP 186 LSPP Sbjct: 114 LSPP 117
>Q5SM03:MURA_THET8 UDP-N-acetylglucosamine 1-carboxyvinyltransferase - Thermus| thermophilus (strain HB8 / ATCC 27634 / DSM 579) Length = 425 Score = 32.3 bits (72), Expect = 6.5 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 8/93 (8%) Frame = +1 Query: 346 VDSFLNKFFPSGYPYSVNEGYLTYTKFRALQHFSSAMLHVLSTQSLLFAAGLRP------ 507 +D+ L+K + SG+ V E ++ +FRA A HV + + F L+P Sbjct: 261 LDALLDKLWRSGHRLEVGEDWI---RFRATP--DPAPFHVEAREYPGFPTDLQPIATAYL 315 Query: 508 --TPAQATAVSWILKDGMQHAGKLICSGMGARM 600 P Q+T V I D H G+L + MGA + Sbjct: 316 ATVPGQSTVVDRIYPDRFTHVGEL--ARMGAEL 346
>Q72GJ4:MURA_THET2 UDP-N-acetylglucosamine 1-carboxyvinyltransferase - Thermus| thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) Length = 425 Score = 32.3 bits (72), Expect = 6.5 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 8/93 (8%) Frame = +1 Query: 346 VDSFLNKFFPSGYPYSVNEGYLTYTKFRALQHFSSAMLHVLSTQSLLFAAGLRP------ 507 +D+ L+K + SG+ V E ++ +FRA A HV + + F L+P Sbjct: 261 LDALLDKLWRSGHRLEVGEDWI---RFRATP--DPAPFHVEAREYPGFPTDLQPIATAYL 315 Query: 508 --TPAQATAVSWILKDGMQHAGKLICSGMGARM 600 P Q+T V I D H G+L + MGA + Sbjct: 316 ATVPGQSTVVDRIYPDRFTHVGEL--ARMGAEL 346
>Q92359:YDHE_SCHPO Pumilio domain-containing protein C6G9.14 - Schizosaccharomyces pombe| (Fission yeast) Length = 681 Score = 32.0 bits (71), Expect = 8.5 Identities = 35/137 (25%), Positives = 57/137 (41%), Gaps = 3/137 (2%) Frame = -2 Query: 1120 FTLPASSINRFGNRRSSLYLSSAGLETFPLLMKSATTIAVLCGLSVFIGVAL---ISCTT 950 FT +SS N SS+ + GL++ + K + +L + F G L ++ +T Sbjct: 222 FTSGSSSTNNSTTSSSSM---ANGLQS---ISKHSAAFPLLSNATSFFGENLTPSLAAST 275 Query: 949 PHICTAESNGPMISFP*VVEHTVDDNPMPAPIPITLKSVEMASPLANKSLRLPSLAKDDI 770 + +S+G I+ + P P P + +V SP +PSL DD Sbjct: 276 ASTGSTDSSGSNIANTLIA-------PTPTISPPSANTVGNPSPADTPGFNVPSLISDDP 328 Query: 769 SVALSLWQQPQPFPLRN 719 SV+ SL L+N Sbjct: 329 SVSSSLSSSVASLSLQN 345
>Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 - Homo sapiens (Human)| Length = 2752 Score = 32.0 bits (71), Expect = 8.5 Identities = 27/96 (28%), Positives = 37/96 (38%) Frame = -3 Query: 1509 RRDAPPALHPACAVIRISRMRSGCDSHPRTGPCTSPCSSLPKRTWGTRSPSSDRRHSGRR 1330 R PP PA R S S S + +S SS + + S SS S Sbjct: 2591 REGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650 Query: 1329 RAIQHLISPSPKPRQRPATPEAHPLRLRSAQGPCKP 1222 A P P+ +PA+P+ P R ++ P KP Sbjct: 2651 PA-----KPGPQALPKPASPKKPPPGERRSRSPRKP 2681
>P93329:NO20_MEDTR Early nodulin 20 precursor - Medicago truncatula (Barrel medic)| Length = 268 Score = 32.0 bits (71), Expect = 8.5 Identities = 19/56 (33%), Positives = 26/56 (46%) Frame = +2 Query: 26 PRPQRPANPHPFPLPPRRRQPAAVSV*PAGPKEEDEASPHGVAPPWTYSRKFAEAA 193 P P P + P P PPRR P+ S P+ P SP + P + RK + A+ Sbjct: 140 PSPPTPRSSTPIPHPPRRSLPSPPSPSPS-PSPSPSPSPSPRSTPIPHPRKRSPAS 194
>Q8ZLM6:FMT_SALTY Methionyl-tRNA formyltransferase - Salmonella typhimurium| Length = 315 Score = 32.0 bits (71), Expect = 8.5 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 8/51 (15%) Frame = +1 Query: 1210 KKATRLTWSLSRAQPER-MRFGGGWSLPWL-------RRWRDQVLDRATPS 1338 K+ R+ WSLS AQ ER +R W + WL + W+ V++ AT S Sbjct: 210 KEEARIDWSLSAAQLERCIRAFNPWPMSWLEIDGQPVKVWQASVIEDATQS 260
>Q8Z1X0:FMT_SALTI Methionyl-tRNA formyltransferase - Salmonella typhi| Length = 315 Score = 32.0 bits (71), Expect = 8.5 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 8/51 (15%) Frame = +1 Query: 1210 KKATRLTWSLSRAQPER-MRFGGGWSLPWL-------RRWRDQVLDRATPS 1338 K+ R+ WSLS AQ ER +R W + WL + W+ V++ AT S Sbjct: 210 KEEARIDWSLSAAQLERCIRAFNPWPMSWLEIDGQPVKVWQASVIEDATQS 260
>Q5PIT7:FMT_SALPA Methionyl-tRNA formyltransferase - Salmonella paratyphi-a| Length = 315 Score = 32.0 bits (71), Expect = 8.5 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 8/51 (15%) Frame = +1 Query: 1210 KKATRLTWSLSRAQPER-MRFGGGWSLPWL-------RRWRDQVLDRATPS 1338 K+ R+ WSLS AQ ER +R W + WL + W+ V++ AT S Sbjct: 210 KEEARIDWSLSAAQLERCIRAFNPWPMSWLEIDGQPVKVWQASVIEDATQS 260
>Q57J63:FMT_SALCH Methionyl-tRNA formyltransferase - Salmonella choleraesuis| Length = 315 Score = 32.0 bits (71), Expect = 8.5 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 8/51 (15%) Frame = +1 Query: 1210 KKATRLTWSLSRAQPER-MRFGGGWSLPWL-------RRWRDQVLDRATPS 1338 K+ R+ WSLS AQ ER +R W + WL + W+ V++ AT S Sbjct: 210 KEEARIDWSLSAAQLERCIRAFNPWPMSWLEIDGQPVKVWQASVIEDATQS 260
>Q8X8F1:FMT_ECO57 Methionyl-tRNA formyltransferase - Escherichia coli O157:H7| Length = 315 Score = 32.0 bits (71), Expect = 8.5 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 8/49 (16%) Frame = +1 Query: 1210 KKATRLTWSLSRAQPER-MRFGGGWSLPW-------LRRWRDQVLDRAT 1332 K+ R+ WSLS AQ ER +R W + W ++ W+ V+D AT Sbjct: 210 KEEARIDWSLSAAQLERCIRAFNPWPMSWVEIEGQPVKVWKASVIDTAT 258 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 351,517,939 Number of extensions: 8891842 Number of successful extensions: 33097 Number of sequences better than 10.0: 41 Number of HSP's gapped: 32501 Number of HSP's successfully gapped: 48 Length of query: 588 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 469 Effective length of database: 68,045,334 Effective search space: 31913261646 Effective search space used: 31913261646 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
