ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf55n05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001074951.1| Oryza sativa (japonica cultivar-group) Os11g... 52 0.005
2ref|NM_001074944.1| Oryza sativa (japonica cultivar-group) Os11g... 52 0.005
3gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.005
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.005
5gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.005
6dbj|AK110901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.005
7dbj|AK107024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.005
8ref|NM_001072681.1| Oryza sativa (japonica cultivar-group) Os12g... 48 0.079
9dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.079
10dbj|AK109461.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.079
11dbj|AK121769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.079
12emb|CR533581.1| Oryza sativa chromosome 12, . Partial sequence f... 48 0.079
13gb|AF022967.1| Caenorhabditis elegans cosmid C13A2, complete seq... 46 0.31
14gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 46 0.31
15emb|AL731718.30| Mouse DNA sequence from clone RP23-167O21 on ch... 46 0.31
16ref|XM_678310.1| PREDICTED: Danio rerio similar to IL-6 subfamil... 46 0.31
17ref|XM_679703.1| PREDICTED: Danio rerio similar to IL-6 subfamil... 46 0.31
18gb|AC010876.2| Homo sapiens BAC clone RP11-214A4 from 2, complet... 46 0.31
19gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 46 0.31
20emb|BX005415.5| Zebrafish DNA sequence from clone DKEY-21I5 in l... 46 0.31
21emb|BX004981.4| Zebrafish DNA sequence from clone CH211-169J7 in... 46 0.31
22emb|AL645563.12| Mouse DNA sequence from clone RP23-132L14 on ch... 46 0.31
23gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete ge... 44 1.2
24gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome 44 1.2
25emb|CR848035.7| Zebrafish DNA sequence from clone CH211-203J1 in... 44 1.2
26ref|XM_359583.1| Magnaporthe grisea 70-15 hypothetical protein (... 44 1.2
27gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 44 1.2
28dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.2
29dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.2
30gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, c... 44 1.2
31gb|AC104261.4| Homo sapiens chromosome 15, clone CTD-2548C12, co... 44 1.2
32dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 44 1.2
33dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic D... 44 1.2
34emb|BX001014.6| Zebrafish DNA sequence from clone DKEY-11C5 in l... 44 1.2
35ref|XM_001110710.1| PREDICTED: Macaca mulatta similar to Pax tra... 42 4.9
36emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 4.9
37gb|AC186150.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 4.9
38gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, comp... 42 4.9
39gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genom... 42 4.9
40gb|AC134322.25| Medicago truncatula clone mth2-17i21, complete s... 42 4.9
41gb|AC150635.4| Bos taurus BAC CH240-448P19 (Children's Hospital... 42 4.9
42gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 4.9
43gb|BT014000.1| Lycopersicon esculentum clone 133047R, mRNA sequence 42 4.9
44ref|XM_541746.2| PREDICTED: Canis familiaris similar to nucleopo... 42 4.9
45gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequ... 42 4.9
46gb|AC123883.10| Mus musculus chromosome 3, clone RP23-461P7, com... 42 4.9
47gb|AC109240.30| Mus musculus chromosome 1, clone RP23-445I23, co... 42 4.9
48gb|AY312168.1| Zea mays homeobox transcription factor GNARLY1 (g... 42 4.9
49gb|AC134175.1| Drosophila pseudoobscura FOSMID DPSF1-548A9 (Chi... 42 4.9
50gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequ... 42 4.9
51gb|AE011785.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 4.9
52dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.9
53dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.9
54emb|CR381587.14| Zebrafish DNA sequence from clone CH211-142C4, ... 42 4.9
55emb|AL583804.5| Human DNA sequence from clone RP11-276E17 on chr... 42 4.9
56dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic D... 42 4.9
57emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 4.9
58emb|AJ439060.1|AGA439060 Anopheles gambiae DNA from 2R chromosom... 42 4.9
59gb|AF276720.1|AF276720 Dioscorea elephantipes phytochrome A (PHY... 42 4.9
60gb|AF335723.1|AF335723 Burkholderia pseudomallei formate hydroge... 42 4.9
61gb|DQ314496.1| Uncultured prokaryote 2E01B sequence 42 4.9
62dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic D... 42 4.9
63emb|BX294165.10| Zebrafish DNA sequence from clone DKEYP-20E4 in... 42 4.9
64emb|BX548076.6| Zebrafish DNA sequence from clone CH211-154A22 i... 42 4.9
65emb|BX005226.10| Zebrafish DNA sequence from clone CH211-175P12 ... 42 4.9
66gb|AC115021.15| Mus musculus chromosome 3, clone RP24-232N19, co... 42 4.9
67gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 4.9
68ref|XM_667303.1| Plasmodium berghei strain ANKA hypothetical pro... 42 4.9
69emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb... 42 4.9
70emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 42 4.9
71emb|AL731709.19| Mouse DNA sequence from clone RP23-316M14 on ch... 42 4.9
72gb|AY720779.1| Harknessia eucalyptorum strain CPC 85 beta-tubuli... 42 4.9
73gb|AY720778.1| Harknessia eucalyptorum strain CBS 113620 beta-tu... 42 4.9 
>ref|NM_001074951.1| Oryza sativa (japonica cultivar-group) Os11g0665600 (Os11g0665600)
           mRNA, complete cds
          Length = 666
 Score = 52.0 bits (26), Expect = 0.005
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 372 ctcgacgaggcgctcaagctcgtcgagtcc 401
           |||||||| |||||||||||||||||||||
Sbjct: 214 ctcgacgacgcgctcaagctcgtcgagtcc 243
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>ref|NM_001074944.1| Oryza sativa (japonica cultivar-group) Os11g0661800 (Os11g0661800)
           mRNA, complete cds
          Length = 1768

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 372 ctcgacgaggcgctcaagctcgtcgagtcc 401
           ||||||||||||| ||||||||||||||||
Sbjct: 229 ctcgacgaggcgcacaagctcgtcgagtcc 258
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>gb|AC129227.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0099J16, complete sequence
          Length = 133198

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 372   ctcgacgaggcgctcaagctcgtcgagtcc 401
             |||||||| |||||||||||||||||||||
Sbjct: 40711 ctcgacgacgcgctcaagctcgtcgagtcc 40740
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 372      ctcgacgaggcgctcaagctcgtcgagtcc 401
                ||||||||||||| ||||||||||||||||
Sbjct: 25713626 ctcgacgaggcgcacaagctcgtcgagtcc 25713597



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                              
Query: 372      ctcgacgaggcgctcaagctcgtcgagtcc 401
                |||||||| |||||||||||||||||||||
Sbjct: 25964255 ctcgacgacgcgctcaagctcgtcgagtcc 25964226
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>gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0039K08, complete sequence
          Length = 122163

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 372   ctcgacgaggcgctcaagctcgtcgagtcc 401
             ||||||||||||| ||||||||||||||||
Sbjct: 25969 ctcgacgaggcgcacaagctcgtcgagtcc 25940
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>dbj|AK110901.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-B02, full
           insert sequence
          Length = 1665

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 372 ctcgacgaggcgctcaagctcgtcgagtcc 401
           |||||||| |||||||||||||||||||||
Sbjct: 653 ctcgacgacgcgctcaagctcgtcgagtcc 682
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>dbj|AK107024.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-A04, full
           insert sequence
          Length = 1767

 Score = 52.0 bits (26), Expect = 0.005
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 372 ctcgacgaggcgctcaagctcgtcgagtcc 401
           ||||||||||||| ||||||||||||||||
Sbjct: 228 ctcgacgaggcgcacaagctcgtcgagtcc 257
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>ref|NM_001072681.1| Oryza sativa (japonica cultivar-group) Os12g0145900 (Os12g0145900)
            mRNA, complete cds
          Length = 2615

 Score = 48.1 bits (24), Expect = 0.079
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 494  cgcctgcgtcaccgacttcggcctggcg 521
            |||||||||| |||||||||||||||||
Sbjct: 1892 cgcctgcgtcgccgacttcggcctggcg 1919
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.079
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 494     cgcctgcgtcaccgacttcggcctggcg 521
               |||||||||| |||||||||||||||||
Sbjct: 2251072 cgcctgcgtcgccgacttcggcctggcg 2251045



 Score = 42.1 bits (21), Expect = 4.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 373      tcgacgaggcgctcaagctcgtcgagtcc 401
                ||||||| ||||||||||||||| |||||
Sbjct: 10241507 tcgacgacgcgctcaagctcgtccagtcc 10241479
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>dbj|AK109461.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-C09, full
            insert sequence
          Length = 3605

 Score = 48.1 bits (24), Expect = 0.079
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 494  cgcctgcgtcaccgacttcggcctggcg 521
            |||||||||| |||||||||||||||||
Sbjct: 2767 cgcctgcgtcgccgacttcggcctggcg 2794
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>dbj|AK121769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092C05, full
            insert sequence
          Length = 2612

 Score = 48.1 bits (24), Expect = 0.079
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 494  cgcctgcgtcaccgacttcggcctggcg 521
            |||||||||| |||||||||||||||||
Sbjct: 1892 cgcctgcgtcgccgacttcggcctggcg 1919
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>emb|CR533581.1| Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0062G09
             of library OSJNBa from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 28333

 Score = 48.1 bits (24), Expect = 0.079
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 494   cgcctgcgtcaccgacttcggcctggcg 521
             |||||||||| |||||||||||||||||
Sbjct: 25740 cgcctgcgtcgccgacttcggcctggcg 25767
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>gb|AF022967.1| Caenorhabditis elegans cosmid C13A2, complete sequence
          Length = 35348

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 1119 gtacagttagtacagtacagtacagta 1145
            ||||| |||||||||||||||||||||
Sbjct: 1647 gtacatttagtacagtacagtacagta 1673
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 364    aggccgtgctcgacgaggcgctc 386
              |||||||||||||||||||||||
Sbjct: 780967 aggccgtgctcgacgaggcgctc 780945



 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 366     gccgtgctcgacgaggcgctc 386
               |||||||||||||||||||||
Sbjct: 2805656 gccgtgctcgacgaggcgctc 2805636
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>emb|AL731718.30| Mouse DNA sequence from clone RP23-167O21 on chromosome 4, complete
             sequence
          Length = 133646

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 799   catcatcgcagcagcagcagcac 821
             |||||||||||||||||||||||
Sbjct: 84594 catcatcgcagcagcagcagcac 84572
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>ref|XM_678310.1| PREDICTED: Danio rerio similar to IL-6 subfamily-like cytokine M17
           (LOC555717), mRNA
          Length = 1083

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 798 ccatcatcgcagcagcagcagca 820
           |||||||||||||||||||||||
Sbjct: 106 ccatcatcgcagcagcagcagca 84
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>ref|XM_679703.1| PREDICTED: Danio rerio similar to IL-6 subfamily-like cytokine M17
           (LOC556802), mRNA
          Length = 1083

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 798 ccatcatcgcagcagcagcagca 820
           |||||||||||||||||||||||
Sbjct: 106 ccatcatcgcagcagcagcagca 84
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>gb|AC010876.2| Homo sapiens BAC clone RP11-214A4 from 2, complete sequence
          Length = 95417

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 806   gcagcagcagcagcaccagagtt 828
             |||||||||||||||||||||||
Sbjct: 22500 gcagcagcagcagcaccagagtt 22522
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 298    cgagcacgaccagcagcggcagc 320
              |||||||||||||||||||||||
Sbjct: 732660 cgagcacgaccagcagcggcagc 732682
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>emb|BX005415.5| Zebrafish DNA sequence from clone DKEY-21I5 in linkage group 5, complete
              sequence
          Length = 243510

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 798    ccatcatcgcagcagcagcagca 820
              |||||||||||||||||||||||
Sbjct: 171445 ccatcatcgcagcagcagcagca 171467
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>emb|BX004981.4| Zebrafish DNA sequence from clone CH211-169J7 in linkage group 7,
              complete sequence
          Length = 162525

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 798    ccatcatcgcagcagcagcagca 820
              |||||||||||||||||||||||
Sbjct: 122803 ccatcatcgcagcagcagcagca 122825
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>emb|AL645563.12| Mouse DNA sequence from clone RP23-132L14 on chromosome 4, complete
             sequence
          Length = 214456

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 1127  agtacagtacagtacagtagcat 1149
             |||||||||||||||||||||||
Sbjct: 77642 agtacagtacagtacagtagcat 77620
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>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome
          Length = 6988209

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 358    ggctgaaggccgtgctcgacga 379
              ||||||||||||||||||||||
Sbjct: 818410 ggctgaaggccgtgctcgacga 818431
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>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome
          Length = 9139763

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 500    cgtcaccgacttcggcctggcg 521
              ||||||||||||||||||||||
Sbjct: 138545 cgtcaccgacttcggcctggcg 138524



 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 501     gtcaccgacttcggcctggcg 521
               |||||||||||||||||||||
Sbjct: 8083395 gtcaccgacttcggcctggcg 8083375
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>emb|CR848035.7| Zebrafish DNA sequence from clone CH211-203J1 in linkage group 12,
             complete sequence
          Length = 143674

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 636   cagcagcaccagagctcgcagc 657
             ||||||||||||||||||||||
Sbjct: 35874 cagcagcaccagagctcgcagc 35895
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>ref|XM_359583.1| Magnaporthe grisea 70-15 hypothetical protein (MG05194.4) partial
           mRNA
          Length = 471

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 364 aggccgtgctcgacgaggcgctcaag 389
           |||||||| |||||||||||||||||
Sbjct: 386 aggccgtggtcgacgaggcgctcaag 411
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 360     ctgaaggccgtgctcgacgagg 381
               ||||||||||||||||||||||
Sbjct: 3050561 ctgaaggccgtgctcgacgagg 3050540
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 1188    taatactccctctgtttctttt 1209
               ||||||||||||||||||||||
Sbjct: 2759962 taatactccctctgtttctttt 2759941
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 1188     taatactccctctgtttctttt 1209
                ||||||||||||||||||||||
Sbjct: 24072707 taatactccctctgtttctttt 24072728
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>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence
          Length = 146836

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1188  taatactccctctgtttctttt 1209
             ||||||||||||||||||||||
Sbjct: 86738 taatactccctctgtttctttt 86717
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>gb|AC104261.4| Homo sapiens chromosome 15, clone CTD-2548C12, complete sequence
          Length = 49457

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 806   gcagcagcagcagcaccagagttctc 831
             ||||||||||||||| ||||||||||
Sbjct: 15075 gcagcagcagcagcagcagagttctc 15050
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>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1004_A05
          Length = 174290

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1188  taatactccctctgtttctttt 1209
             ||||||||||||||||||||||
Sbjct: 31448 taatactccctctgtttctttt 31469
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>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1476_F05
          Length = 125426

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1188   taatactccctctgtttctttt 1209
              ||||||||||||||||||||||
Sbjct: 107745 taatactccctctgtttctttt 107766
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>emb|BX001014.6| Zebrafish DNA sequence from clone DKEY-11C5 in linkage group 12, complete
              sequence
          Length = 193523

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 636    cagcagcaccagagctcgcagc 657
              ||||||||||||||||||||||
Sbjct: 174949 cagcagcaccagagctcgcagc 174970
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>ref|XM_001110710.1| PREDICTED: Macaca mulatta similar to Pax transcription activation
            domain interacting protein (LOC718279), mRNA
          Length = 5868

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 806  gcagcagcagcagcaccagagttctcagc 834
            ||||||||||||||| |||| ||||||||
Sbjct: 1335 gcagcagcagcagcagcagatttctcagc 1363
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 431     caagaagctgatcaccagtac 451
               |||||||||||||||||||||
Sbjct: 4336816 caagaagctgatcaccagtac 4336836
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>gb|AC186150.1| Ornithorhynchus anatinus chromosome UNK clone OABb-264K6, complete
             sequence
          Length = 149168

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1125  ttagtacagtacagtacagta 1145
             |||||||||||||||||||||
Sbjct: 43375 ttagtacagtacagtacagta 43395
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>gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, complete sequence
          Length = 218755

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 806    gcagcagcagcagcaccagagttct 830
              ||||||||||||||| |||||||||
Sbjct: 128312 gcagcagcagcagcaacagagttct 128336
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>gb|AC135502.4| Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence, complete
             sequence
          Length = 132292

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 260   cgtcgacctcatccacaatcccgacgact 288
             |||||| ||||||||||| ||||||||||
Sbjct: 60521 cgtcgagctcatccacaagcccgacgact 60549
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>gb|AC134322.25| Medicago truncatula clone mth2-17i21, complete sequence
          Length = 136954

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1125  ttagtacagtacagtacagta 1145
             |||||||||||||||||||||
Sbjct: 51377 ttagtacagtacagtacagta 51357
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>gb|AC150635.4| Bos taurus  BAC CH240-448P19 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 151766

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 806   gcagcagcagcagcaccagagttct 830
             ||||||||||||||| |||||||||
Sbjct: 84897 gcagcagcagcagcagcagagttct 84921
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 605    gcagagcttcctgtccacgccgggg 629
              |||||||||||||| ||||||||||
Sbjct: 138996 gcagagcttcctgttcacgccgggg 138972



 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 359     gctgaaggccgtgctcgacga 379
               |||||||||||||||||||||
Sbjct: 1671543 gctgaaggccgtgctcgacga 1671563
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>gb|BT014000.1| Lycopersicon esculentum clone 133047R, mRNA sequence
          Length = 1307

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 805 cgcagcagcagcagcaccaga 825
           |||||||||||||||||||||
Sbjct: 895 cgcagcagcagcagcaccaga 875
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>ref|XM_541746.2| PREDICTED: Canis familiaris similar to nucleoporin 210 (LOC484632),
           mRNA
          Length = 9105

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 255 gccatcgtcgacctcatccac 275
           |||||||||||||||||||||
Sbjct: 268 gccatcgtcgacctcatccac 288
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>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence
          Length = 505334

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 295    cggcgagcacgaccagcagcggcag 319
              |||||||||||| ||||||||||||
Sbjct: 365995 cggcgagcacgagcagcagcggcag 366019
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>gb|AC123883.10| Mus musculus chromosome 3, clone RP23-461P7, complete sequence
          Length = 199554

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 806    gcagcagcagcagcaccagag 826
              |||||||||||||||||||||
Sbjct: 120013 gcagcagcagcagcaccagag 119993
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>gb|AC109240.30| Mus musculus chromosome 1, clone RP23-445I23, complete sequence
          Length = 189545

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 806  gcagcagcagcagcaccagagttct 830
            ||||||||||||||| |||||||||
Sbjct: 9890 gcagcagcagcagcaacagagttct 9866
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>gb|AY312168.1| Zea mays homeobox transcription factor GNARLY1 (gn1) gene, complete
            cds
          Length = 17631

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 804  tcgcagcagcagcagcaccag 824
            |||||||||||||||||||||
Sbjct: 7096 tcgcagcagcagcagcaccag 7116
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>gb|AC134175.1| Drosophila pseudoobscura  FOSMID DPSF1-548A9 (Children's Hospital
            Oakland Research Institute Drosophila pseudoobscura
            FOSMID Library) complete sequence
          Length = 45260

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 805  cgcagcagcagcagcaccaga 825
            |||||||||||||||||||||
Sbjct: 8623 cgcagcagcagcagcaccaga 8603
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>gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequence
          Length = 183894

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 1126   tagtacagtacagtacagtagcata 1150
              |||||||||||||||||||| ||||
Sbjct: 115972 tagtacagtacagtacagtaccata 115996
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>gb|AE011785.1| Xanthomonas axonopodis pv. citri str. 306,  section 163 of 469 of
           the complete genome
          Length = 11903

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 160 gcgcgatcaccaacgtggtgc 180
           |||||||||||||||||||||
Sbjct: 294 gcgcgatcaccaacgtggtgc 314
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 260      cgtcgacctcatccacaatcccgacgact 288
                |||||| ||||||||||| ||||||||||
Sbjct: 21548656 cgtcgagctcatccacaagcccgacgact 21548684
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 311      cagcggcagcggccgcacgat 331
                |||||||||||||||||||||
Sbjct: 25919438 cagcggcagcggccgcacgat 25919458
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>emb|CR381587.14| Zebrafish DNA sequence from clone CH211-142C4, complete sequence
          Length = 169210

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1125  ttagtacagtacagtacagta 1145
             |||||||||||||||||||||
Sbjct: 83702 ttagtacagtacagtacagta 83722
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>emb|AL583804.5| Human DNA sequence from clone RP11-276E17 on chromosome 1 Contains the
             5' end of a novel gene, a novel gene and a pseudogene
             similar to flavin-containing monooxygenase proteins,
             complete sequence
          Length = 168837

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 806   gcagcagcagcagcaccagag 826
             |||||||||||||||||||||
Sbjct: 78004 gcagcagcagcagcaccagag 77984
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>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0707D10
          Length = 172003

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 311   cagcggcagcggccgcacgat 331
             |||||||||||||||||||||
Sbjct: 15505 cagcggcagcggccgcacgat 15525
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 605     gcagagcttcctgtccacgccgggg 629
               |||||||||||||| ||||||||||
Sbjct: 1534588 gcagagcttcctgttcacgccgggg 1534564



 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 359     gctgaaggccgtgctcgacga 379
               |||||||||||||||||||||
Sbjct: 3006527 gctgaaggccgtgctcgacga 3006547
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>emb|AJ439060.1|AGA439060 Anopheles gambiae DNA from 2R chromosome, clone 11N17
          Length = 147295

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 804   tcgcagcagcagcagcaccag 824
             |||||||||||||||||||||
Sbjct: 44568 tcgcagcagcagcagcaccag 44588
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>gb|AF276720.1|AF276720 Dioscorea elephantipes phytochrome A (PHYA) gene, partial cds
          Length = 1098

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 800 atcatcgcagcagcagcagca 820
           |||||||||||||||||||||
Sbjct: 591 atcatcgcagcagcagcagca 611
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>gb|AF335723.1|AF335723 Burkholderia pseudomallei formate hydrogenlyase subunit 4 and
            hydrogenase-4 component B genes, complete cds
          Length = 4262

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 605  gcagagcttcctgtccacgccgggg 629
            |||||||||||||| ||||||||||
Sbjct: 1804 gcagagcttcctgttcacgccgggg 1780
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>gb|DQ314496.1| Uncultured prokaryote 2E01B sequence
          Length = 34665

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 364  aggccgtgctcgacgaggcgc 384
            |||||||||||||||||||||
Sbjct: 1420 aggccgtgctcgacgaggcgc 1440
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>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0510C12
          Length = 177049

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 311    cagcggcagcggccgcacgat 331
              |||||||||||||||||||||
Sbjct: 159362 cagcggcagcggccgcacgat 159382
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>emb|BX294165.10| Zebrafish DNA sequence from clone DKEYP-20E4 in linkage group 22,
             complete sequence
          Length = 125073

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1125  ttagtacagtacagtacagta 1145
             |||||||||||||||||||||
Sbjct: 46783 ttagtacagtacagtacagta 46763
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>emb|BX548076.6| Zebrafish DNA sequence from clone CH211-154A22 in linkage group 15,
             complete sequence
          Length = 175161

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1125  ttagtacagtacagtacagta 1145
             |||||||||||||||||||||
Sbjct: 39664 ttagtacagtacagtacagta 39644
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>emb|BX005226.10| Zebrafish DNA sequence from clone CH211-175P12 in linkage group 22,
              complete sequence
          Length = 176642

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1125   ttagtacagtacagtacagta 1145
              |||||||||||||||||||||
Sbjct: 126685 ttagtacagtacagtacagta 126665
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>gb|AC115021.15| Mus musculus chromosome 3, clone RP24-232N19, complete sequence
          Length = 168461

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 806  gcagcagcagcagcaccagag 826
            |||||||||||||||||||||
Sbjct: 8543 gcagcagcagcagcaccagag 8523
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 368    cgtgctcgacgaggcgctcaa 388
              |||||||||||||||||||||
Sbjct: 502256 cgtgctcgacgaggcgctcaa 502236
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>ref|XM_667303.1| Plasmodium berghei strain ANKA hypothetical protein (PB300503.00.0)
            partial mRNA
          Length = 873

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1244 aatttcaccatatttatattt 1264
            |||||||||||||||||||||
Sbjct: 171  aatttcaccatatttatattt 191
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>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 135439

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 373  tcgacgaggcgctcaagctcgtcgagtcc 401
            ||||||| ||||||||||||||| |||||
Sbjct: 4426 tcgacgacgcgctcaagctcgtccagtcc 4398
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 1127    agtacagtacagtacagtagcatag 1151
               |||||| ||||||||||||||||||
Sbjct: 3493215 agtacaatacagtacagtagcatag 3493191
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>emb|AL731709.19| Mouse DNA sequence from clone RP23-316M14 on chromosome 2, complete
              sequence
          Length = 211034

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 958    aactcccagccggcgatgctg 978
              |||||||||||||||||||||
Sbjct: 173155 aactcccagccggcgatgctg 173135
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>gb|AY720779.1| Harknessia eucalyptorum strain CPC 85 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 869

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 802 catcgcagcagcagcagcacc 822
           |||||||||||||||||||||
Sbjct: 281 catcgcagcagcagcagcacc 301
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>gb|AY720778.1| Harknessia eucalyptorum strain CBS 113620 beta-tubulin (tub2) gene,
           exons 2 through 6 and partial cds
          Length = 806

 Score = 42.1 bits (21), Expect = 4.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 802 catcgcagcagcagcagcacc 822
           |||||||||||||||||||||
Sbjct: 281 catcgcagcagcagcagcacc 301


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 191,554,192
Number of extensions: 11412015
Number of successful extensions: 466592
Number of sequences better than 10.0: 73
Number of HSP's gapped: 466576
Number of HSP's successfully gapped: 79
Length of query: 1282
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1259
Effective length of database: 18,503,978,556
Effective search space: 23296509002004
Effective search space used: 23296509002004
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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