ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf59g03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, co... 66 2e-07
2emb|CT829127.1| Oryza sativa (indica cultivar-group) cDNA clone:... 54 7e-04
3emb|CT829126.1| Oryza sativa (indica cultivar-group) cDNA clone:... 54 7e-04
4ref|NM_001048422.1| Oryza sativa (japonica cultivar-group) Os01g... 54 7e-04
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 7e-04
6emb|AJ277468.1|OSA277468 Oryza sativa rbbi3-1 gene for putative ... 54 7e-04
7dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic D... 54 7e-04
8dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic D... 54 7e-04
9dbj|AK062394.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 7e-04
10emb|AJ277472.1|OSA277472 Oryza sativa rbbi2-5 gene for putative ... 52 0.003
11dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic D... 52 0.003
12ref|NM_001048440.1| Oryza sativa (japonica cultivar-group) Os01g... 50 0.011
13dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.011
14dbj|AK105455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.011
15dbj|AK102138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.011
16emb|CT830259.1| Oryza sativa (indica cultivar-group) cDNA clone:... 46 0.18
17dbj|AK243607.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 46 0.18
18ref|NM_001048425.1| Oryza sativa (japonica cultivar-group) Os01g... 46 0.18
19ref|NM_001048424.1| Oryza sativa (japonica cultivar-group) Os01g... 46 0.18
20ref|NM_001048423.1| Oryza sativa (japonica cultivar-group) Os01g... 46 0.18
21emb|AJ277470.1|OSA277470 Oryza sativa rbbi2-3 gene for putative ... 46 0.18
22emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowm... 46 0.18
23dbj|AK108197.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.18
24dbj|AK104367.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.18
25dbj|AK104110.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.18
26dbj|AK099279.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.18
27dbj|AK067257.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.18
28dbj|AK064050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.18
29dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA f... 46 0.18
30gb|AY103562.1| Zea mays PCO085487 mRNA sequence 46 0.18
31gb|AY104323.1| Zea mays PCO085485 mRNA sequence 46 0.18
32emb|CT830281.1| Oryza sativa (indica cultivar-group) cDNA clone:... 44 0.71
33ref|NM_001048421.1| Oryza sativa (japonica cultivar-group) Os01g... 44 0.71
34ref|NM_001048420.1| Oryza sativa (japonica cultivar-group) Os01g... 44 0.71
35emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete se... 44 0.71
36gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 44 0.71
37dbj|AK104671.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.71
38dbj|AK104410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.71
39dbj|AK070467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.71
40dbj|AK065846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.71
41dbj|AK060800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.71
42gb|U57640.1|OSU57640 Oryza sativa Bowman-Birk type trypsin inhib... 44 0.71
43gb|AF098292.1|AF098292 Lycopersicon esculentum endo-beta-1,4-D-g... 44 0.71
44emb|AL935300.10| Zebrafish DNA sequence from clone CH211-241E1, ... 44 0.71
45gb|U76004.1|OSU76004 Oryza sativa Bowman-Birk proteinase inhibit... 44 0.71
46gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete ge... 42 2.8
47emb|CT834167.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 2.8
48emb|CT832737.1| Oryza sativa (indica cultivar-group) cDNA clone:... 42 2.8
49emb|CR855136.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 2.8
50gb|AC190394.3| Canis Familiaris chromosome 26, clone XX-497F13, ... 42 2.8
51ref|NM_001060647.1| Oryza sativa (japonica cultivar-group) Os04g... 42 2.8
52gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspa... 42 2.8
53gb|AC069078.5| Homo sapiens chromosome 10 clone RP11-492B17, com... 42 2.8
54dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.8
55emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chrom... 42 2.8
56emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4,... 42 2.8
57gb|AC135891.3| Homo sapiens 12 BAC RP11-764E9 (Roswell Park Canc... 42 2.8
58dbj|AK099088.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.8
59dbj|AK062107.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.8
60dbj|AB095022.1| Oryza sativa (japonica cultivar-group) Jab1 gene... 42 2.8
61gb|AF072849.1|AF072849 Oryza sativa subsp. indica jab1 protein (... 42 2.8
62emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4,... 42 2.8
63dbj|AB055495.1| Oryza sativa Jab1 mRNA for JUN-activation-domain... 42 2.8

>gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, complete sequence; putative Bowman
            Birk trypsin inhibitor gene, complete cds; Stowaway MITE,
            complete sequence; and insertion sequences xl_tt1a and
            xl_tt1b putative ripening related protein genes, complete
            cds
          Length = 26073
 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                        
Query: 398  acccgccgacgtgccgctgcgtcgacgaggtcaaaaagtgtgctccgacgtgcaagacct 457
            ||||||||||||||| ||||| |||||||||| |  |||| || ||||| ||||||||||
Sbjct: 8835 acccgccgacgtgccactgcgccgacgaggtcgagcagtgcgccccgacctgcaagacct 8894

                 
Query: 458  gcctg 462
            |||||
Sbjct: 8895 gcctg 8899



 Score = 58.0 bits (29), Expect = 5e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                         
Query: 97   gtcgccggcgacgaggtgggctccattctcctgccgagccagggc 141
            ||||||| ||||| |||||||||||| ||||||||||| ||||||
Sbjct: 4858 gtcgccgacgacgtggtgggctccatcctcctgccgagacagggc 4902



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 105  cgacgaggtgggctccattctcctgccgagccagggccaagg 146
            |||||| ||||||||||| |||||||||||||| ||| ||||
Sbjct: 8374 cgacgacgtgggctccatcctcctgccgagccaaggcaaagg 8415



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 59   gcatcctgctgatgcttgcgctgcaggcagccctactggtcgccggc 105
            ||||||||||||||||| | ||| ||||  |||| ||||||||||||
Sbjct: 8313 gcatcctgctgatgctttcactggaggcctcccttctggtcgccggc 8359



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 180  gccgtggaagtgctgcgaccag 201
            ||||||||||||||||||||||
Sbjct: 8611 gccgtggaagtgctgcgaccag 8632



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 268  acctgcaagtcctgcgggccgtcca 292
            |||||||||||||||| ||||||||
Sbjct: 8699 acctgcaagtcctgcgtgccgtcca 8723



to top

>emb|CT829127.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122M09, full
           insert sequence
          Length = 1371

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 172 aagaagaggccgtggaagtgctgcgac 198
           |||||||||||||||||||||||||||
Sbjct: 327 aagaagaggccgtggaagtgctgcgac 353



to top

>emb|CT829126.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA007A19, full
           insert sequence
          Length = 1365

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 172 aagaagaggccgtggaagtgctgcgac 198
           |||||||||||||||||||||||||||
Sbjct: 760 aagaagaggccgtggaagtgctgcgac 786



to top

>ref|NM_001048422.1| Oryza sativa (japonica cultivar-group) Os01g0124100 (Os01g0124100)
           mRNA, complete cds
          Length = 930

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 172 aagaagaggccgtggaagtgctgcgac 198
           |||||||||||||||||||||||||||
Sbjct: 388 aagaagaggccgtggaagtgctgcgac 414



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                          
Query: 172     aagaagaggccgtggaagtgctgcgac 198
               |||||||||||||||||||||||||||
Sbjct: 1344660 aagaagaggccgtggaagtgctgcgac 1344634



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                         
Query: 173     agaagaggccgtggaagtgctgcgac 198
               ||||||||||||||||||||||||||
Sbjct: 1363128 agaagaggccgtggaagtgctgcgac 1363103



 Score = 50.1 bits (25), Expect = 0.011
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                    
Query: 177     gaggccgtggaagtgctgcgaccaggcggtgtgcaccaggtccatcccgccga 229
               |||||||||||| ||||||||| | || |||||||| ||||| || |||||||
Sbjct: 1515222 gaggccgtggaaatgctgcgacgacgccgtgtgcacaaggtcgatgccgccga 1515274



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                           
Query: 367     tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
               ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 1347130 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 1347071

                          
Query: 427     gtcaaaaagtg 437
               || || |||||
Sbjct: 1347070 gtgaacaagtg 1347060



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 176     agaggccgtggaagtgctgcgac 198
               |||||||||||||||||||||||
Sbjct: 1353388 agaggccgtggaagtgctgcgac 1353366



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 208     tgcaccaggtccatcccgccgatctgc 234
               ||||||||||| |||||||||||||||
Sbjct: 1365026 tgcaccaggtcgatcccgccgatctgc 1365000



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 172     aagaagaggccgtggaagtgctgcgac 198
               ||||||| |||||||||||||||||||
Sbjct: 1365266 aagaagaagccgtggaagtgctgcgac 1365240



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 177     gaggccgtggaagtgctgcgac 198
               ||||||||||||||||||||||
Sbjct: 1337917 gaggccgtggaagtgctgcgac 1337896



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                           
Query: 367     tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
               ||||||||||||||  |||||||||||||   ||| ||||  |||| ||||| |||||||
Sbjct: 1340797 tgctgcgacaaggccttctgcaccaggtctctcccaccgatctgccactgcgccgacgag 1340738

                 
Query: 427     gt 428
               ||
Sbjct: 1340737 gt 1340736



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                           
Query: 367     tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
               ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 1353170 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 1353111

                 
Query: 427     gt 428
               ||
Sbjct: 1353110 gt 1353109



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 174     gaagaggccgtggaagtgctg 194
               |||||||||||||||||||||
Sbjct: 1347350 gaagaggccgtggaagtgctg 1347330



to top

>emb|AJ277468.1|OSA277468 Oryza sativa rbbi3-1 gene for putative Bowman Birk trypsin inhibitor
          Length = 17385

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                       
Query: 172  aagaagaggccgtggaagtgctgcgac 198
            |||||||||||||||||||||||||||
Sbjct: 6556 aagaagaggccgtggaagtgctgcgac 6582



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                        
Query: 367  tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
            ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 4099 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 4158

                       
Query: 427  gtcaaaaagtg 437
            || || |||||
Sbjct: 4159 gtgaacaagtg 4169



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 367   tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
             ||||||||||||||  |||||||||||||   ||| ||||  |||| ||||| |||||||
Sbjct: 10419 tgctgcgacaaggccttctgcaccaggtctctcccaccgatctgccactgcgccgacgag 10478

               
Query: 427   gt 428
             ||
Sbjct: 10479 gt 10480



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 177   gaggccgtggaagtgctgcgac 198
             ||||||||||||||||||||||
Sbjct: 13261 gaggccgtggaagtgctgcgac 13282



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 174  gaagaggccgtggaagtgctg 194
            |||||||||||||||||||||
Sbjct: 3879 gaagaggccgtggaagtgctg 3899



to top

>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0445D12
          Length = 140952

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                         
Query: 172    aagaagaggccgtggaagtgctgcgac 198
              |||||||||||||||||||||||||||
Sbjct: 138314 aagaagaggccgtggaagtgctgcgac 138288



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                          
Query: 367    tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
              ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 140784 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 140725

                         
Query: 427    gtcaaaaagtg 437
              || || |||||
Sbjct: 140724 gtgaacaagtg 140714



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 177    gaggccgtggaagtgctgcgac 198
              ||||||||||||||||||||||
Sbjct: 131571 gaggccgtggaagtgctgcgac 131550



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                          
Query: 367    tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
              ||||||||||||||  |||||||||||||   ||| ||||  |||| ||||| |||||||
Sbjct: 134451 tgctgcgacaaggccttctgcaccaggtctctcccaccgatctgccactgcgccgacgag 134392

                
Query: 427    gt 428
              ||
Sbjct: 134391 gt 134390



to top

>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0037C04
          Length = 137879

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 172   aagaagaggccgtggaagtgctgcgac 198
             |||||||||||||||||||||||||||
Sbjct: 42711 aagaagaggccgtggaagtgctgcgac 42685



 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 173   agaagaggccgtggaagtgctgcgac 198
             ||||||||||||||||||||||||||
Sbjct: 61179 agaagaggccgtggaagtgctgcgac 61154



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                         
Query: 367   tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
             ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 45181 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 45122

                        
Query: 427   gtcaaaaagtg 437
             || || |||||
Sbjct: 45121 gtgaacaagtg 45111



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 176   agaggccgtggaagtgctgcgac 198
             |||||||||||||||||||||||
Sbjct: 51439 agaggccgtggaagtgctgcgac 51417



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 208   tgcaccaggtccatcccgccgatctgc 234
             ||||||||||| |||||||||||||||
Sbjct: 63077 tgcaccaggtcgatcccgccgatctgc 63051



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 172   aagaagaggccgtggaagtgctgcgac 198
             ||||||| |||||||||||||||||||
Sbjct: 63317 aagaagaagccgtggaagtgctgcgac 63291



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 177   gaggccgtggaagtgctgcgac 198
             ||||||||||||||||||||||
Sbjct: 35968 gaggccgtggaagtgctgcgac 35947



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 367   tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
             ||||||||||||||  |||||||||||||   ||| ||||  |||| ||||| |||||||
Sbjct: 38848 tgctgcgacaaggccttctgcaccaggtctctcccaccgatctgccactgcgccgacgag 38789

               
Query: 427   gt 428
             ||
Sbjct: 38788 gt 38787



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 367   tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
             ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 51221 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 51162

               
Query: 427   gt 428
             ||
Sbjct: 51161 gt 51160



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 174   gaagaggccgtggaagtgctg 194
             |||||||||||||||||||||
Sbjct: 45401 gaagaggccgtggaagtgctg 45381



to top

>dbj|AK062394.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-D05, full
           insert sequence
          Length = 930

 Score = 54.0 bits (27), Expect = 7e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 172 aagaagaggccgtggaagtgctgcgac 198
           |||||||||||||||||||||||||||
Sbjct: 388 aagaagaggccgtggaagtgctgcgac 414



to top

>emb|AJ277472.1|OSA277472 Oryza sativa rbbi2-5 gene for putative Bowman Birk tryspin inhibitor
          Length = 2378

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                      
Query: 173  agaagaggccgtggaagtgctgcgac 198
            ||||||||||||||||||||||||||
Sbjct: 1377 agaagaggccgtggaagtgctgcgac 1402



to top

>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0044F08
          Length = 141528

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                       
Query: 173   agaagaggccgtggaagtgctgcgac 198
             ||||||||||||||||||||||||||
Sbjct: 12749 agaagaggccgtggaagtgctgcgac 12724



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 176  agaggccgtggaagtgctgcgac 198
            |||||||||||||||||||||||
Sbjct: 3009 agaggccgtggaagtgctgcgac 2987



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 208   tgcaccaggtccatcccgccgatctgc 234
             ||||||||||| |||||||||||||||
Sbjct: 14647 tgcaccaggtcgatcccgccgatctgc 14621



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 172   aagaagaggccgtggaagtgctgcgac 198
             ||||||| |||||||||||||||||||
Sbjct: 14887 aagaagaagccgtggaagtgctgcgac 14861



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 367  tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
            ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 2791 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 2732

              
Query: 427  gt 428
            ||
Sbjct: 2731 gt 2730



to top

>ref|NM_001048440.1| Oryza sativa (japonica cultivar-group) Os01g0127600 (Os01g0127600)
           mRNA, complete cds
          Length = 878

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 177 gaggccgtggaagtgctgcgaccaggcggtgtgcaccaggtccatcccgccga 229
           |||||||||||| ||||||||| | || |||||||| ||||| || |||||||
Sbjct: 386 gaggccgtggaaatgctgcgacgacgccgtgtgcacaaggtcgatgccgccga 438



to top

>dbj|AP002860.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0409B08
          Length = 134673

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 177   gaggccgtggaagtgctgcgaccaggcggtgtgcaccaggtccatcccgccga 229
             |||||||||||| ||||||||| | || |||||||| ||||| || |||||||
Sbjct: 80870 gaggccgtggaaatgctgcgacgacgccgtgtgcacaaggtcgatgccgccga 80922



to top

>dbj|AK105455.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-D07, full
           insert sequence
          Length = 876

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 177 gaggccgtggaagtgctgcgaccaggcggtgtgcaccaggtccatcccgccga 229
           |||||||||||| ||||||||| | || |||||||| ||||| || |||||||
Sbjct: 384 gaggccgtggaaatgctgcgacgacgccgtgtgcacaaggtcgatgccgccga 436



to top

>dbj|AK102138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085I16, full
           insert sequence
          Length = 879

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 177 gaggccgtggaagtgctgcgaccaggcggtgtgcaccaggtccatcccgccga 229
           |||||||||||| ||||||||| | || |||||||| ||||| || |||||||
Sbjct: 387 gaggccgtggaaatgctgcgacgacgccgtgtgcacaaggtcgatgccgccga 439



to top

>emb|CT830259.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA020A21, full
           insert sequence
          Length = 951

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
           ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 588 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 647

                      
Query: 427 gtcaaaaagtg 437
           || || |||||
Sbjct: 648 gtgaacaagtg 658



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 174 gaagaggccgtggaagtgctg 194
           |||||||||||||||||||||
Sbjct: 368 gaagaggccgtggaagtgctg 388



to top

>dbj|AK243607.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100085E21,
           full insert sequence
          Length = 1067

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 176 agaggccgtggaagtgctgcgac 198
           |||||||||||||||||||||||
Sbjct: 384 agaggccgtggaagtgctgcgac 406



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
           ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 602 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 661

             
Query: 427 gt 428
           ||
Sbjct: 662 gt 663



to top

>ref|NM_001048425.1| Oryza sativa (japonica cultivar-group) Os01g0124700 (Os01g0124700)
           mRNA, complete cds
          Length = 800

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 208 tgcaccaggtccatcccgccgatctgc 234
           ||||||||||| |||||||||||||||
Sbjct: 324 tgcaccaggtcgatcccgccgatctgc 298



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 172 aagaagaggccgtggaagtgctgcgac 198
           ||||||| |||||||||||||||||||
Sbjct: 564 aagaagaagccgtggaagtgctgcgac 538



to top

>ref|NM_001048424.1| Oryza sativa (japonica cultivar-group) Os01g0124400 (Os01g0124400)
           mRNA, partial cds
          Length = 829

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 172 aagaagaggccgtggaagtgctgcgac 198
           ||||||| |||||||||||||||||||
Sbjct: 142 aagaagaagccgtggaagtgctgcgac 168



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
           ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 363 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 422

             
Query: 427 gt 428
           ||
Sbjct: 423 gt 424



to top

>ref|NM_001048423.1| Oryza sativa (japonica cultivar-group) Os01g0124200 (Os01g0124200)
           mRNA, partial cds
          Length = 1071

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
           ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 591 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 650

                      
Query: 427 gtcaaaaagtg 437
           || || |||||
Sbjct: 651 gtgaacaagtg 661



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 174 gaagaggccgtggaagtgctg 194
           |||||||||||||||||||||
Sbjct: 371 gaagaggccgtggaagtgctg 391



to top

>emb|AJ277470.1|OSA277470 Oryza sativa rbbi2-3 gene for putative Bowman Birk trypsin
           inhibitor
          Length = 2336

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 172 aagaagaggccgtggaagtgctgcgac 198
           ||||||| |||||||||||||||||||
Sbjct: 775 aagaagaagccgtggaagtgctgcgac 801



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 208  tgcaccaggtccatcccgccgatctgc 234
            ||||||||||| |||||||||||||||
Sbjct: 1015 tgcaccaggtcgatcccgccgatctgc 1041



to top

>emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowman Birk trypsin inhibitor
          Length = 4624

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 176  agaggccgtggaagtgctgcgac 198
            |||||||||||||||||||||||
Sbjct: 3041 agaggccgtggaagtgctgcgac 3063



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 367  tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
            ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 3259 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 3318

              
Query: 427  gt 428
            ||
Sbjct: 3319 gt 3320



to top

>dbj|AK108197.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C08, full
           insert sequence
          Length = 802

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 208 tgcaccaggtccatcccgccgatctgc 234
           ||||||||||| |||||||||||||||
Sbjct: 326 tgcaccaggtcgatcccgccgatctgc 300



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 172 aagaagaggccgtggaagtgctgcgac 198
           ||||||| |||||||||||||||||||
Sbjct: 566 aagaagaagccgtggaagtgctgcgac 540



to top

>dbj|AK104367.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D09, full
           insert sequence
          Length = 1059

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
           ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 594 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 653

                      
Query: 427 gtcaaaaagtg 437
           || || |||||
Sbjct: 654 gtgaacaagtg 664



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 174 gaagaggccgtggaagtgctg 194
           |||||||||||||||||||||
Sbjct: 374 gaagaggccgtggaagtgctg 394



to top

>dbj|AK104110.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-G03, full
           insert sequence
          Length = 1047

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
           ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 594 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 653

                      
Query: 427 gtcaaaaagtg 437
           || || |||||
Sbjct: 654 gtgaacaagtg 664



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 174 gaagaggccgtggaagtgctg 194
           |||||||||||||||||||||
Sbjct: 374 gaagaggccgtggaagtgctg 394



to top

>dbj|AK099279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023130E04, full
           insert sequence
          Length = 830

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 172 aagaagaggccgtggaagtgctgcgac 198
           ||||||| |||||||||||||||||||
Sbjct: 168 aagaagaagccgtggaagtgctgcgac 194



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 208 tgcaccaggtccatcccgccgatctgc 234
           ||||||||||| |||||||||||||||
Sbjct: 408 tgcaccaggtcgatcccgccgatctgc 434



to top

>dbj|AK067257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096H09, full
           insert sequence
          Length = 1072

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 59/71 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
           ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 592 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 651

                      
Query: 427 gtcaaaaagtg 437
           || || |||||
Sbjct: 652 gtgaacaagtg 662



 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 174 gaagaggccgtggaagtgctg 194
           |||||||||||||||||||||
Sbjct: 372 gaagaggccgtggaagtgctg 392



to top

>dbj|AK064050.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-E08, full
           insert sequence
          Length = 847

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 172 aagaagaggccgtggaagtgctgcgac 198
           ||||||| |||||||||||||||||||
Sbjct: 167 aagaagaagccgtggaagtgctgcgac 193



 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 208 tgcaccaggtccatcccgccgatctgc 234
           ||||||||||| |||||||||||||||
Sbjct: 407 tgcaccaggtcgatcccgccgatctgc 433



to top

>dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA for trypsin
           inhibitor, complete cds
          Length = 1061

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 176 agaggccgtggaagtgctgcgac 198
           |||||||||||||||||||||||
Sbjct: 364 agaggccgtggaagtgctgcgac 386



 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
           ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 582 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 641

             
Query: 427 gt 428
           ||
Sbjct: 642 gt 643



to top

>gb|AY103562.1| Zea mays PCO085487 mRNA sequence
          Length = 2258

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 172  aagaagaggccgtggaagtgctgcgac 198
            ||||||||||||||||| |||||||||
Sbjct: 2173 aagaagaggccgtggaaatgctgcgac 2199



to top

>gb|AY104323.1| Zea mays PCO085485 mRNA sequence
          Length = 1303

 Score = 46.1 bits (23), Expect = 0.18
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 172 aagaagaggccgtggaagtgctgcgac 198
           ||||||||||||||||| |||||||||
Sbjct: 553 aagaagaggccgtggaaatgctgcgac 579



to top

>emb|CT830281.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN089D18, full
           insert sequence
          Length = 883

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
           ||||||||||||||  |||||||||||||   ||| ||||  |||| ||||| |||||||
Sbjct: 436 tgctgcgacaaggccttctgcaccaggtctctcccaccgatctgccactgcgccgacgag 495

             
Query: 427 gt 428
           ||
Sbjct: 496 gt 497



to top

>ref|NM_001048421.1| Oryza sativa (japonica cultivar-group) Os01g0124000 (Os01g0124000)
           mRNA, complete cds
          Length = 910

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
           ||||||||||||||  |||||||||||||   ||| ||||  |||| ||||| |||||||
Sbjct: 481 tgctgcgacaaggccttctgcaccaggtctctcccaccgatctgccactgcgccgacgag 540

             
Query: 427 gt 428
           ||
Sbjct: 541 gt 542



to top

>ref|NM_001048420.1| Oryza sativa (japonica cultivar-group) Os01g0123900 (Os01g0123900)
           mRNA, complete cds
          Length = 858

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 177 gaggccgtggaagtgctgcgac 198
           ||||||||||||||||||||||
Sbjct: 182 gaggccgtggaagtgctgcgac 203



to top

>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence
          Length = 7497934

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 96      ggtcgccggcgacgaggtgggc 117
               ||||||||||||||||||||||
Sbjct: 2958699 ggtcgccggcgacgaggtgggc 2958720



to top

>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 537     ccgggaggacgttgccaccggcggta 562
               |||||||| |||||||||||||||||
Sbjct: 1593024 ccgggaggtcgttgccaccggcggta 1593049



to top

>dbj|AK104671.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-D04, full
           insert sequence
          Length = 855

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 177 gaggccgtggaagtgctgcgac 198
           ||||||||||||||||||||||
Sbjct: 177 gaggccgtggaagtgctgcgac 198



to top

>dbj|AK104410.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G05, full
           insert sequence
          Length = 858

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 177 gaggccgtggaagtgctgcgac 198
           ||||||||||||||||||||||
Sbjct: 182 gaggccgtggaagtgctgcgac 203



to top

>dbj|AK070467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023053A08, full
           insert sequence
          Length = 859

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 177 gaggccgtggaagtgctgcgac 198
           ||||||||||||||||||||||
Sbjct: 183 gaggccgtggaagtgctgcgac 204



to top

>dbj|AK065846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042O18, full
           insert sequence
          Length = 911

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
           ||||||||||||||  |||||||||||||   ||| ||||  |||| ||||| |||||||
Sbjct: 482 tgctgcgacaaggccttctgcaccaggtctctcccaccgatctgccactgcgccgacgag 541

             
Query: 427 gt 428
           ||
Sbjct: 542 gt 543



to top

>dbj|AK060800.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F04, full
            insert sequence
          Length = 1958

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 367  tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
            ||||||||||||||  |||||||||||||   ||| ||||  |||| ||||| |||||||
Sbjct: 1521 tgctgcgacaaggccttctgcaccaggtctctcccaccgatctgccactgcgccgacgag 1580

              
Query: 427  gt 428
            ||
Sbjct: 1581 gt 1582



to top

>gb|U57640.1|OSU57640 Oryza sativa Bowman-Birk type trypsin inhibitor mRNA, complete cds
          Length = 855

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
           ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 364 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 423

             
Query: 427 gt 428
           ||
Sbjct: 424 gt 425



to top

>gb|AF098292.1|AF098292 Lycopersicon esculentum endo-beta-1,4-D-glucanase (Cel8) mRNA,
           complete cds
          Length = 2534

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 148 gaagcagccgccatggcggcgg 169
           ||||||||||||||||||||||
Sbjct: 714 gaagcagccgccatggcggcgg 693



to top

>emb|AL935300.10| Zebrafish DNA sequence from clone CH211-241E1, complete sequence
          Length = 157088

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 652    gtaagaataaaataaaatggat 673
              ||||||||||||||||||||||
Sbjct: 102075 gtaagaataaaataaaatggat 102096



to top

>gb|U76004.1|OSU76004 Oryza sativa Bowman-Birk proteinase inhibitor mRNA, complete cds
          Length = 1050

 Score = 44.1 bits (22), Expect = 0.71
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                       
Query: 367 tgctgcgacaaggctatctgcaccaggtccaacccgccgacgtgccgctgcgtcgacgag 426
           ||||||||||||||  |||||| || |   ||||||||||| ||||||||| | ||||||
Sbjct: 559 tgctgcgacaaggccttctgcaacaagatgaacccgccgacctgccgctgcatggacgag 618

             
Query: 427 gt 428
           ||
Sbjct: 619 gt 620



to top

>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome
          Length = 6988209

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 94      ctggtcgccggcgacgaggtg 114
               |||||||||||||||||||||
Sbjct: 2434979 ctggtcgccggcgacgaggtg 2434999



to top

>emb|CT834167.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107I22, full
           insert sequence
          Length = 1518

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 98  tcgccggcgacgaggtgggctccat 122
           |||||| ||||||||||||||||||
Sbjct: 115 tcgccgccgacgaggtgggctccat 91



to top

>emb|CT832737.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107I22, full
           insert sequence
          Length = 1518

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 98  tcgccggcgacgaggtgggctccat 122
           |||||| ||||||||||||||||||
Sbjct: 115 tcgccgccgacgaggtgggctccat 91



to top

>emb|CR855136.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0147J19,
             complete sequence
          Length = 123992

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 98    tcgccggcgacgaggtgggctccat 122
             |||||| ||||||||||||||||||
Sbjct: 48595 tcgccgccgacgaggtgggctccat 48571



to top

>gb|AC190394.3| Canis Familiaris chromosome 26, clone XX-497F13, complete sequence
          Length = 168871

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 654    aagaataaaataaaatggatg 674
              |||||||||||||||||||||
Sbjct: 154051 aagaataaaataaaatggatg 154031



to top

>ref|NM_001060647.1| Oryza sativa (japonica cultivar-group) Os04g0654700 (Os04g0654700)
           mRNA, complete cds
          Length = 1536

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 98  tcgccggcgacgaggtgggctccat 122
           |||||| ||||||||||||||||||
Sbjct: 121 tcgccgccgacgaggtgggctccat 97



to top

>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete
             sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12
             (WM1.12) genes, complete cds; transposons Ophelia2,
             Angela3s, and XJ3, complete sequence; LRR protein WM1.3
             (WM1.3) gene, complete cds; Stowaway MITE, transposons
             XJ1, Jody, Angela, and XJ and Stowaway MITE, complete
             sequence; LRR protein WM1.2 (WM1.2) and LLR protein WM1.1
             (WM1.1) genes, complete cds; transposons XJ, XA, Angela,
             and Fred and WM1.11 gene, complete sequence; RPM1-like
             sequence and LRR protein WM1.10 (WM1.10) genes, complete
             cds; and transposon XJ, complete sequence
          Length = 198649

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 692   aattatgagtaagacatcatggcaatgtttaat 724
             |||||||| ||||||| | ||||||||||||||
Sbjct: 56565 aattatgaataagacaacttggcaatgtttaat 56533



to top

>gb|AC069078.5| Homo sapiens chromosome 10 clone RP11-492B17, complete sequence
          Length = 187669

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 621   tcctcctgccctgctgcagca 641
             |||||||||||||||||||||
Sbjct: 72330 tcctcctgccctgctgcagca 72310



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 98       tcgccggcgacgaggtgggctccat 122
                |||||| ||||||||||||||||||
Sbjct: 33428527 tcgccgccgacgaggtgggctccat 33428503



to top

>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4
          Length = 340552

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 653    taagaataaaataaaatggat 673
              |||||||||||||||||||||
Sbjct: 223861 taagaataaaataaaatggat 223881



to top

>emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F16,
             complete sequence
          Length = 119535

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 98    tcgccggcgacgaggtgggctccat 122
             |||||| ||||||||||||||||||
Sbjct: 74406 tcgccgccgacgaggtgggctccat 74382



to top

>gb|AC135891.3| Homo sapiens 12 BAC RP11-764E9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 92128

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 621   tcctcctgccctgctgcagca 641
             |||||||||||||||||||||
Sbjct: 10726 tcctcctgccctgctgcagca 10746



to top

>dbj|AK099088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007N04, full
           insert sequence
          Length = 1537

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 98  tcgccggcgacgaggtgggctccat 122
           |||||| ||||||||||||||||||
Sbjct: 122 tcgccgccgacgaggtgggctccat 98



to top

>dbj|AK062107.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B03, full
           insert sequence
          Length = 1532

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 98  tcgccggcgacgaggtgggctccat 122
           |||||| ||||||||||||||||||
Sbjct: 144 tcgccgccgacgaggtgggctccat 120



to top

>dbj|AB095022.1| Oryza sativa (japonica cultivar-group) Jab1 gene for
           JUN-activation-domain-binding protein 1, complete cds
          Length = 4180

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 98  tcgccggcgacgaggtgggctccat 122
           |||||| ||||||||||||||||||
Sbjct: 596 tcgccgccgacgaggtgggctccat 572



to top

>gb|AF072849.1|AF072849 Oryza sativa subsp. indica jab1 protein (jab1) mRNA, complete cds
          Length = 1379

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 98  tcgccggcgacgaggtgggctccat 122
           |||||| ||||||||||||||||||
Sbjct: 97  tcgccgccgacgaggtgggctccat 73



to top

>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13,
            complete sequence
          Length = 152264

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 98   tcgccggcgacgaggtgggctccat 122
            |||||| ||||||||||||||||||
Sbjct: 4716 tcgccgccgacgaggtgggctccat 4692



to top

>dbj|AB055495.1| Oryza sativa Jab1 mRNA for JUN-activation-domain-binding protein
           homolog, complete cds
          Length = 1267

 Score = 42.1 bits (21), Expect = 2.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 98  tcgccggcgacgaggtgggctccat 122
           |||||| ||||||||||||||||||
Sbjct: 69  tcgccgccgacgaggtgggctccat 45


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 109,090,101
Number of extensions: 7146076
Number of successful extensions: 158157
Number of sequences better than 10.0: 63
Number of HSP's gapped: 158139
Number of HSP's successfully gapped: 112
Length of query: 746
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 724
Effective length of database: 18,508,616,841
Effective search space: 13400238592884
Effective search space used: 13400238592884
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top