ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf59f23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001060252.1| Oryza sativa (japonica cultivar-group) Os04g0592600 (Os04g0592600) mRNA, complete cds Length = 1310 Score = 702 bits (354), Expect = 0.0 Identities = 627/718 (87%) Strand = Plus / Plus Query: 161 ggttcccgctctgggaggccgcgctcggcgccggggtcgccgccgtcttcgccgcgggcc 220 |||||||| | |||||||| ||||||||||||||||||||||||| ||||||| | || | Sbjct: 175 ggttcccggtgtgggaggcggcgctcggcgccggggtcgccgccgccttcgccaccgggc 234 Query: 221 tcgtcggggtctacctctccatgccggactccgactacagcttcctcaagttgccccgca 280 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 235 tcgtcggagtctacctctccatgccggactccgactacagcttcctcaagttgccgcgca 294 Query: 281 acctccacgaactacaaatcctcactggccatcttgagaactataccagtgactacaccg 340 ||||| | || || |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 295 acctcgaggagctccaaatcctcactggacatcttgagaactataccagtgattacacca 354 Query: 341 tacaggtgttgataggttactgtgctgtatacatattcatgcagaccttcatgatcccag 400 |||| |||||| | ||||||||| |||| ||||| ||||||||||||||||||||||||| Sbjct: 355 tacaagtgttggtgggttactgttctgtgtacatcttcatgcagaccttcatgatcccag 414 Query: 401 ggacaatattcatgtcattgcttgctggtgctctattcgggcaactccggggcgtggctt 460 | ||||||||||||||||||||||| ||| |||| || |||||||||||||| ||||| Sbjct: 415 gaacaatattcatgtcattgcttgccggttctctgtttgggcaactccggggtgtggccc 474 Query: 461 tggttgtctttgctgcctccgctggtgcttcttcatgctatttcctgtcgaaactgattg 520 | || || ||||| ||||| |||||||||||||| |||| |||||||||||| ||||||| Sbjct: 475 tcgtggtatttgcagcctctgctggtgcttcttcgtgctttttcctgtcgaagctgattg 534 Query: 521 gaaaaccgctggtgttcgtgttgtggccagacaaactcacgtttttccagaagcaggttg 580 |||| || |||||||| |||||||||| || |||| ||| |||||||||||||||| Sbjct: 535 gaaagccattggtgttctcactgtggccagataagctcatgttcttccagaagcaggttg 594 Query: 581 ccaaaagaagagaaaagctgttgaattacatgcttttcctgagggtcaccccaacattgc 640 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 595 ccaaaagaagagaaaagctgttgaattacatgctttttctcagggtcaccccaacattgc 654 Query: 641 caaataccttcatcaacttagcatctcccattgttgatgtgcccttccataccttcttat 700 |||| |||||||| |||||||| || ||||| || |||||||||| ||||| |||||| Sbjct: 655 caaacaccttcattaacttagcttcacccatagtagatgtgccctaccatatattcttac 714 Query: 701 tggcaactcttatcggtctcatcccagcagcctacgtgaccgtgagggctggcattgctc 760 |||||||||| ||||||||||||||||| |||| || || || |||||||| ||||||| Sbjct: 715 tggcaactctcatcggtctcatcccagcttcctatgttactgtcagggctgggattgctc 774 Query: 761 tgggagagctgacatcgctcagcgacctgtacgacacccagtcagtagctctgctgttct 820 | |||||| | ||||| | || |||||||| || ||||| || |||| |||||||||| Sbjct: 775 taggagagttaacatcattgagtgacctgtatgatacccaatcgatagcgctgctgttct 834 Query: 821 tgatcggcgtcgtctcggtcacaccagcattgctgagcaaggacgaggctcaagaaaa 878 ||||||| | || |||||||||||| ||||| || |||||||||| || |||||||| Sbjct: 835 tgatcgggattgtttcggtcacaccaacattgttgggcaaggacgaagcgcaagaaaa 892 Score = 71.9 bits (36), Expect = 6e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1285 tatatattgaccagattcattcaatccatattcagtgattcaat 1328 |||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 1266 tatatattgatcagattcattcaatccatattcagtggttcaat 1309
>dbj|AK071102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077L10, full insert sequence Length = 1310 Score = 702 bits (354), Expect = 0.0 Identities = 627/718 (87%) Strand = Plus / Plus Query: 161 ggttcccgctctgggaggccgcgctcggcgccggggtcgccgccgtcttcgccgcgggcc 220 |||||||| | |||||||| ||||||||||||||||||||||||| ||||||| | || | Sbjct: 175 ggttcccggtgtgggaggcggcgctcggcgccggggtcgccgccgccttcgccaccgggc 234 Query: 221 tcgtcggggtctacctctccatgccggactccgactacagcttcctcaagttgccccgca 280 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 235 tcgtcggagtctacctctccatgccggactccgactacagcttcctcaagttgccgcgca 294 Query: 281 acctccacgaactacaaatcctcactggccatcttgagaactataccagtgactacaccg 340 ||||| | || || |||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 295 acctcgaggagctccaaatcctcactggacatcttgagaactataccagtgattacacca 354 Query: 341 tacaggtgttgataggttactgtgctgtatacatattcatgcagaccttcatgatcccag 400 |||| |||||| | ||||||||| |||| ||||| ||||||||||||||||||||||||| Sbjct: 355 tacaagtgttggtgggttactgttctgtgtacatcttcatgcagaccttcatgatcccag 414 Query: 401 ggacaatattcatgtcattgcttgctggtgctctattcgggcaactccggggcgtggctt 460 | ||||||||||||||||||||||| ||| |||| || |||||||||||||| ||||| Sbjct: 415 gaacaatattcatgtcattgcttgccggttctctgtttgggcaactccggggtgtggccc 474 Query: 461 tggttgtctttgctgcctccgctggtgcttcttcatgctatttcctgtcgaaactgattg 520 | || || ||||| ||||| |||||||||||||| |||| |||||||||||| ||||||| Sbjct: 475 tcgtggtatttgcagcctctgctggtgcttcttcgtgctttttcctgtcgaagctgattg 534 Query: 521 gaaaaccgctggtgttcgtgttgtggccagacaaactcacgtttttccagaagcaggttg 580 |||| || |||||||| |||||||||| || |||| ||| |||||||||||||||| Sbjct: 535 gaaagccattggtgttctcactgtggccagataagctcatgttcttccagaagcaggttg 594 Query: 581 ccaaaagaagagaaaagctgttgaattacatgcttttcctgagggtcaccccaacattgc 640 ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 595 ccaaaagaagagaaaagctgttgaattacatgctttttctcagggtcaccccaacattgc 654 Query: 641 caaataccttcatcaacttagcatctcccattgttgatgtgcccttccataccttcttat 700 |||| |||||||| |||||||| || ||||| || |||||||||| ||||| |||||| Sbjct: 655 caaacaccttcattaacttagcttcacccatagtagatgtgccctaccatatattcttac 714 Query: 701 tggcaactcttatcggtctcatcccagcagcctacgtgaccgtgagggctggcattgctc 760 |||||||||| ||||||||||||||||| |||| || || || |||||||| ||||||| Sbjct: 715 tggcaactctcatcggtctcatcccagcttcctatgttactgtcagggctgggattgctc 774 Query: 761 tgggagagctgacatcgctcagcgacctgtacgacacccagtcagtagctctgctgttct 820 | |||||| | ||||| | || |||||||| || ||||| || |||| |||||||||| Sbjct: 775 taggagagttaacatcattgagtgacctgtatgatacccaatcgatagcgctgctgttct 834 Query: 821 tgatcggcgtcgtctcggtcacaccagcattgctgagcaaggacgaggctcaagaaaa 878 ||||||| | || |||||||||||| ||||| || |||||||||| || |||||||| Sbjct: 835 tgatcgggattgtttcggtcacaccaacattgttgggcaaggacgaagcgcaagaaaa 892 Score = 71.9 bits (36), Expect = 6e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 1285 tatatattgaccagattcattcaatccatattcagtgattcaat 1328 |||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 1266 tatatattgatcagattcattcaatccatattcagtggttcaat 1309
>gb|AY110364.1| Zea mays CL5344_1 mRNA sequence Length = 1292 Score = 470 bits (237), Expect = e-129 Identities = 477/557 (85%) Strand = Plus / Plus Query: 319 aactataccagtgactacaccgtacaggtgttgataggttactgtgctgtatacatattc 378 |||||||| |||||||||||| ||||||||||| ||||||| || ||||| ||||| ||| Sbjct: 331 aactatactagtgactacaccctacaggtgttggtaggttattgcgctgtgtacatcttc 390 Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctctattc 438 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 391 atgcagaccttcatgatcccagggacaatattcatgtcactgcttgctggtgctctattt 450 Query: 439 gggcaactccggggcgtggctttggttgtctttgctgcctccgctggtgcttcttcatgc 498 |||||||| || ||| | || |||| |||||||||||| | || ||||||||||| ||| Sbjct: 451 gggcaactgcgtggccttgcactggtggtctttgctgccactgcaggtgcttcttcgtgc 510 Query: 499 tatttcctgtcgaaactgattggaaaaccgctggtgttcgtgttgtggccagacaaactc 558 ||||||||||| || ||||||| || || ||||||||| |||||||||| || ||| Sbjct: 511 tatttcctgtcaaagatgattgggaagccactggtgttcacactgtggccagataagctc 570 Query: 559 acgtttttccagaagcaggttgccaaaagaagagaaaagctgttgaattacatgcttttc 618 | || ||||||| |||||||| ||||||||||| ||| |||||||||||||||||||| Sbjct: 571 agcttcttccagagacaggttgctaaaagaagagagaagttgttgaattacatgcttttc 630 Query: 619 ctgagggtcaccccaacattgccaaataccttcatcaacttagcatctcccattgttgat 678 || ||||| ||||||||||||||||||||||||||||||||||| || ||||| || ||| Sbjct: 631 ctcagggtgaccccaacattgccaaataccttcatcaacttagcttcacccatagtagat 690 Query: 679 gtgcccttccataccttcttattggcaactcttatcggtctcatcccagcagcctacgtg 738 || |||| ||||| |||||| ||| |||||| || ||||| |||||||| || || ||| Sbjct: 691 gtcccctaccatatattcttactgggaactctcattggtcttatcccagctgcttatgtg 750 Query: 739 accgtgagggctggcattgctctgggagagctgacatcgctcagcgacctgtacgacacc 798 || || |||||||| |||||||| |||||| | || ||||| || ||||| ||||||||| Sbjct: 751 actgtcagggctggaattgctcttggagagttaacttcgctgagtgacctttacgacacc 810 Query: 799 cagtcagtagctctgctgttcttgatcggcgtcgtctcggtcacaccagcattgctgagc 858 ||||| |||| ||||| ||| ||||||| || || || |||||||||||||||||| || Sbjct: 811 cagtcgatagcactgctattcctgatcggtgttgtttcagtcacaccagcattgctgggc 870 Query: 859 aaggacgaggctcaaga 875 ||||| ||||| ||||| Sbjct: 871 aaggatgaggcacaaga 887 Score = 163 bits (82), Expect = 2e-36 Identities = 118/130 (90%) Strand = Plus / Plus Query: 172 tgggaggccgcgctcggcgccggggtcgccgccgtcttcgccgcgggcctcgtcggggtc 231 ||||||||||||||||||||||| |||||||||| ||||||||| || |||||||| ||| Sbjct: 184 tgggaggccgcgctcggcgccggagtcgccgccgccttcgccgctggactcgtcggtgtc 243 Query: 232 tacctctccatgccggactccgactacagcttcctcaagttgccccgcaacctccacgaa 291 ||||| |||||||||||||||||||||||||||||||||||||| || || ||| | ||| Sbjct: 244 tacctttccatgccggactccgactacagcttcctcaagttgccacgtaatctcgaggaa 303 Query: 292 ctacaaatcc 301 || ||||||| Sbjct: 304 ctccaaatcc 313 Score = 65.9 bits (33), Expect = 4e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 1285 tatatattgaccagattcattcaatccatattcagtg 1321 |||||||| |||||||||||||||||||||||||||| Sbjct: 1253 tatatattaaccagattcattcaatccatattcagtg 1289
>gb|BT017066.1| Zea mays clone EL01N0358F01.c mRNA sequence Length = 876 Score = 422 bits (213), Expect = e-114 Identities = 462/545 (84%) Strand = Plus / Plus Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggt 429 ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4 tacatcttcatgcagaccttcatgatcccagggacaatattcatgtcactgcttgctggt 63 Query: 430 gctctattcgggcaactccggggcgtggctttggttgtctttgctgcctccgctggtgct 489 |||||||| |||||| | || ||| | || |||| |||||||||||| | || |||||| Sbjct: 64 gctctatttgggcaattgcgtggccttgcgctggtggtctttgctgccactgcaggtgct 123 Query: 490 tcttcatgctatttcctgtcgaaactgattggaaaaccgctggtgttcgtgttgtggcca 549 ||||| |||||||||||||| || ||||||| || || ||||||||| |||||||| Sbjct: 124 tcttcgtgctatttcctgtcaaagatgattgggaagccactggtgttcacactgtggcca 183 Query: 550 gacaaactcacgtttttccagaagcaggttgccaaaagaagagaaaagctgttgaattac 609 || || |||| || ||||||| |||||||| ||||||||||| ||| ||||||||||| Sbjct: 184 gataagctcagcttcttccagagacaggttgctaaaagaagagagaagttgttgaattac 243 Query: 610 atgcttttcctgagggtcaccccaacattgccaaataccttcatcaacttagcatctccc 669 ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 244 atgcttttcctcagggtgaccccaacattgccaaataccttcatcaacttagcttcaccc 303 Query: 670 attgttgatgtgcccttccataccttcttattggcaactcttatcggtctcatcccagca 729 || || ||||| |||| ||||| |||||| ||| |||||| || ||||| |||||||| Sbjct: 304 atagtagatgtcccctaccatatattcttactgggaactctcattggtcttatcccagct 363 Query: 730 gcctacgtgaccgtgagggctggcattgctctgggagagctgacatcgctcagcgacctg 789 || || ||||| || |||||||| |||||||| |||||| | || ||||| || ||||| Sbjct: 364 gcttatgtgactgtcagggctggaattgctcttggagagttaacttcgctgagtgacctt 423 Query: 790 tacgacacccagtcagtagctctgctgttcttgatcggcgtcgtctcggtcacaccagca 849 |||||||||||||| |||| ||||| ||| ||||||| || || || |||||||||||| Sbjct: 424 tacgacacccagtcgatagcactgctattcctgatcggtgttgtttcagtcacaccagca 483 Query: 850 ttgctgagcaaggacgaggctcaagaaaaggcaccagaaatcgcagcaggcgcctcatga 909 |||||| ||||||| ||||| ||||| || |||||||||| || | |||||| |||||| Sbjct: 484 ttgctgggcaaggatgaggcacaagagaaaccaccagaaatggcggtaggcgcgtcatga 543 Query: 910 acacc 914 |||| Sbjct: 544 tcacc 548
>emb|CR855235.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0142I02-OSIGBa0101B20, complete sequence Length = 189880 Score = 260 bits (131), Expect = 1e-65 Identities = 236/271 (87%) Strand = Plus / Minus Query: 310 catcttgagaactataccagtgactacaccgtacaggtgttgataggttactgtgctgta 369 ||||||||||||||||||||||| |||||| |||| |||||| | ||||||||| |||| Sbjct: 95986 catcttgagaactataccagtgattacaccatacaagtgttggtgggttactgttctgtg 95927 Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggt 429 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 95926 tacatcttcatgcagaccttcatgatcccaggaacaatattcatgtcattgcttgccggt 95867 Query: 430 gctctattcgggcaactccggggcgtggctttggttgtctttgctgcctccgctggtgct 489 |||| || |||||||||||||| ||||| | || || ||||| ||||| ||||||||| Sbjct: 95866 tctctgtttgggcaactccggggtgtggccctcgtggtatttgcagcctctgctggtgct 95807 Query: 490 tcttcatgctatttcctgtcgaaactgattggaaaaccgctggtgttcgtgttgtggcca 549 ||||| |||| |||||||||||| ||||||||||| || |||||||| |||||||| Sbjct: 95806 tcttcgtgctttttcctgtcgaagctgattggaaagccattggtgttctcactgtggcca 95747 Query: 550 gacaaactcacgtttttccagaagcaggttg 580 || || |||| ||| |||||||||||||||| Sbjct: 95746 gataagctcatgttcttccagaagcaggttg 95716 Score = 204 bits (103), Expect = 6e-49 Identities = 142/155 (91%) Strand = Plus / Minus Query: 574 caggttgccaaaagaagagaaaagctgttgaattacatgcttttcctgagggtcacccca 633 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 95607 caggttgccaaaagaagagaaaagctgttgaattacatgctttttctcagggtcacccca 95548 Query: 634 acattgccaaataccttcatcaacttagcatctcccattgttgatgtgcccttccatacc 693 ||||||||||| |||||||| |||||||| || ||||| || |||||||||| ||||| Sbjct: 95547 acattgccaaacaccttcattaacttagcttcacccatagtagatgtgccctaccatata 95488 Query: 694 ttcttattggcaactcttatcggtctcatcccagc 728 |||||| |||||||||| ||||||||||||||||| Sbjct: 95487 ttcttactggcaactctcatcggtctcatcccagc 95453 Score = 184 bits (93), Expect = 6e-43 Identities = 132/145 (91%) Strand = Plus / Minus Query: 161 ggttcccgctctgggaggccgcgctcggcgccggggtcgccgccgtcttcgccgcgggcc 220 |||||||| | |||||||| ||||||||||||||||||||||||| ||||||| | || | Sbjct: 97205 ggttcccggtgtgggaggcggcgctcggcgccggggtcgccgccgccttcgccaccgggc 97146 Query: 221 tcgtcggggtctacctctccatgccggactccgactacagcttcctcaagttgccccgca 280 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 97145 tcgtcggagtctacctctccatgccggactccgactacagcttcctcaagttgccgcgca 97086 Query: 281 acctccacgaactacaaatcctcac 305 ||||| | || || ||||||||||| Sbjct: 97085 acctcgaggagctccaaatcctcac 97061 Score = 79.8 bits (40), Expect = 2e-11 Identities = 109/132 (82%) Strand = Plus / Minus Query: 747 ggctggcattgctctgggagagctgacatcgctcagcgacctgtacgacacccagtcagt 806 |||||| |||||||| |||||| | ||||| | || |||||||| || ||||| || | Sbjct: 95347 ggctgggattgctctaggagagttaacatcattgagtgacctgtatgatacccaatcgat 95288 Query: 807 agctctgctgttcttgatcggcgtcgtctcggtcacaccagcattgctgagcaaggacga 866 ||| ||||||||||||||||| | || |||||||||||| ||||| || |||||||||| Sbjct: 95287 agcgctgctgttcttgatcgggattgtttcggtcacaccaacattgttgggcaaggacga 95228 Query: 867 ggctcaagaaaa 878 || |||||||| Sbjct: 95227 agcgcaagaaaa 95216 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Minus Query: 1285 tatatattgaccagattcattcaatccatattcagtgattcaatgacaa 1333 |||||||||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 94842 tatatattgatcagattcattcaatccatattcagtggttcaatcacaa 94794
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 260 bits (131), Expect = 1e-65 Identities = 236/271 (87%) Strand = Plus / Minus Query: 310 catcttgagaactataccagtgactacaccgtacaggtgttgataggttactgtgctgta 369 ||||||||||||||||||||||| |||||| |||| |||||| | ||||||||| |||| Sbjct: 29949635 catcttgagaactataccagtgattacaccatacaagtgttggtgggttactgttctgtg 29949576 Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggt 429 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 29949575 tacatcttcatgcagaccttcatgatcccaggaacaatattcatgtcattgcttgccggt 29949516 Query: 430 gctctattcgggcaactccggggcgtggctttggttgtctttgctgcctccgctggtgct 489 |||| || |||||||||||||| ||||| | || || ||||| ||||| ||||||||| Sbjct: 29949515 tctctgtttgggcaactccggggtgtggccctcgtggtatttgcagcctctgctggtgct 29949456 Query: 490 tcttcatgctatttcctgtcgaaactgattggaaaaccgctggtgttcgtgttgtggcca 549 ||||| |||| |||||||||||| ||||||||||| || |||||||| |||||||| Sbjct: 29949455 tcttcgtgctttttcctgtcgaagctgattggaaagccattggtgttctcactgtggcca 29949396 Query: 550 gacaaactcacgtttttccagaagcaggttg 580 || || |||| ||| |||||||||||||||| Sbjct: 29949395 gataagctcatgttcttccagaagcaggttg 29949365 Score = 204 bits (103), Expect = 6e-49 Identities = 142/155 (91%) Strand = Plus / Minus Query: 574 caggttgccaaaagaagagaaaagctgttgaattacatgcttttcctgagggtcacccca 633 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 29949256 caggttgccaaaagaagagaaaagctgttgaattacatgctttttctcagggtcacccca 29949197 Query: 634 acattgccaaataccttcatcaacttagcatctcccattgttgatgtgcccttccatacc 693 ||||||||||| |||||||| |||||||| || ||||| || |||||||||| ||||| Sbjct: 29949196 acattgccaaacaccttcattaacttagcttcacccatagtagatgtgccctaccatata 29949137 Query: 694 ttcttattggcaactcttatcggtctcatcccagc 728 |||||| |||||||||| ||||||||||||||||| Sbjct: 29949136 ttcttactggcaactctcatcggtctcatcccagc 29949102 Score = 184 bits (93), Expect = 6e-43 Identities = 132/145 (91%) Strand = Plus / Minus Query: 161 ggttcccgctctgggaggccgcgctcggcgccggggtcgccgccgtcttcgccgcgggcc 220 |||||||| | |||||||| ||||||||||||||||||||||||| ||||||| | || | Sbjct: 29950850 ggttcccggtgtgggaggcggcgctcggcgccggggtcgccgccgccttcgccaccgggc 29950791 Query: 221 tcgtcggggtctacctctccatgccggactccgactacagcttcctcaagttgccccgca 280 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 29950790 tcgtcggagtctacctctccatgccggactccgactacagcttcctcaagttgccgcgca 29950731 Query: 281 acctccacgaactacaaatcctcac 305 ||||| | || || ||||||||||| Sbjct: 29950730 acctcgaggagctccaaatcctcac 29950706 Score = 79.8 bits (40), Expect = 2e-11 Identities = 109/132 (82%) Strand = Plus / Minus Query: 747 ggctggcattgctctgggagagctgacatcgctcagcgacctgtacgacacccagtcagt 806 |||||| |||||||| |||||| | ||||| | || |||||||| || ||||| || | Sbjct: 29948996 ggctgggattgctctaggagagttaacatcattgagtgacctgtatgatacccaatcgat 29948937 Query: 807 agctctgctgttcttgatcggcgtcgtctcggtcacaccagcattgctgagcaaggacga 866 ||| ||||||||||||||||| | || |||||||||||| ||||| || |||||||||| Sbjct: 29948936 agcgctgctgttcttgatcgggattgtttcggtcacaccaacattgttgggcaaggacga 29948877 Query: 867 ggctcaagaaaa 878 || |||||||| Sbjct: 29948876 agcgcaagaaaa 29948865 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Minus Query: 1285 tatatattgaccagattcattcaatccatattcagtgattcaatgacaa 1333 |||||||||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 29948491 tatatattgatcagattcattcaatccatattcagtggttcaatcacaa 29948443
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 260 bits (131), Expect = 1e-65 Identities = 236/271 (87%) Strand = Plus / Minus Query: 310 catcttgagaactataccagtgactacaccgtacaggtgttgataggttactgtgctgta 369 ||||||||||||||||||||||| |||||| |||| |||||| | ||||||||| |||| Sbjct: 86387 catcttgagaactataccagtgattacaccatacaagtgttggtgggttactgttctgtg 86328 Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggt 429 ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 86327 tacatcttcatgcagaccttcatgatcccaggaacaatattcatgtcattgcttgccggt 86268 Query: 430 gctctattcgggcaactccggggcgtggctttggttgtctttgctgcctccgctggtgct 489 |||| || |||||||||||||| ||||| | || || ||||| ||||| ||||||||| Sbjct: 86267 tctctgtttgggcaactccggggtgtggccctcgtggtatttgcagcctctgctggtgct 86208 Query: 490 tcttcatgctatttcctgtcgaaactgattggaaaaccgctggtgttcgtgttgtggcca 549 ||||| |||| |||||||||||| ||||||||||| || |||||||| |||||||| Sbjct: 86207 tcttcgtgctttttcctgtcgaagctgattggaaagccattggtgttctcactgtggcca 86148 Query: 550 gacaaactcacgtttttccagaagcaggttg 580 || || |||| ||| |||||||||||||||| Sbjct: 86147 gataagctcatgttcttccagaagcaggttg 86117 Score = 204 bits (103), Expect = 6e-49 Identities = 142/155 (91%) Strand = Plus / Minus Query: 574 caggttgccaaaagaagagaaaagctgttgaattacatgcttttcctgagggtcacccca 633 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 86008 caggttgccaaaagaagagaaaagctgttgaattacatgctttttctcagggtcacccca 85949 Query: 634 acattgccaaataccttcatcaacttagcatctcccattgttgatgtgcccttccatacc 693 ||||||||||| |||||||| |||||||| || ||||| || |||||||||| ||||| Sbjct: 85948 acattgccaaacaccttcattaacttagcttcacccatagtagatgtgccctaccatata 85889 Query: 694 ttcttattggcaactcttatcggtctcatcccagc 728 |||||| |||||||||| ||||||||||||||||| Sbjct: 85888 ttcttactggcaactctcatcggtctcatcccagc 85854 Score = 184 bits (93), Expect = 6e-43 Identities = 132/145 (91%) Strand = Plus / Minus Query: 161 ggttcccgctctgggaggccgcgctcggcgccggggtcgccgccgtcttcgccgcgggcc 220 |||||||| | |||||||| ||||||||||||||||||||||||| ||||||| | || | Sbjct: 87602 ggttcccggtgtgggaggcggcgctcggcgccggggtcgccgccgccttcgccaccgggc 87543 Query: 221 tcgtcggggtctacctctccatgccggactccgactacagcttcctcaagttgccccgca 280 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 87542 tcgtcggagtctacctctccatgccggactccgactacagcttcctcaagttgccgcgca 87483 Query: 281 acctccacgaactacaaatcctcac 305 ||||| | || || ||||||||||| Sbjct: 87482 acctcgaggagctccaaatcctcac 87458 Score = 79.8 bits (40), Expect = 2e-11 Identities = 109/132 (82%) Strand = Plus / Minus Query: 747 ggctggcattgctctgggagagctgacatcgctcagcgacctgtacgacacccagtcagt 806 |||||| |||||||| |||||| | ||||| | || |||||||| || ||||| || | Sbjct: 85748 ggctgggattgctctaggagagttaacatcattgagtgacctgtatgatacccaatcgat 85689 Query: 807 agctctgctgttcttgatcggcgtcgtctcggtcacaccagcattgctgagcaaggacga 866 ||| ||||||||||||||||| | || |||||||||||| ||||| || |||||||||| Sbjct: 85688 agcgctgctgttcttgatcgggattgtttcggtcacaccaacattgttgggcaaggacga 85629 Query: 867 ggctcaagaaaa 878 || |||||||| Sbjct: 85628 agcgcaagaaaa 85617 Score = 73.8 bits (37), Expect = 1e-09 Identities = 46/49 (93%) Strand = Plus / Minus Query: 1285 tatatattgaccagattcattcaatccatattcagtgattcaatgacaa 1333 |||||||||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 85243 tatatattgatcagattcattcaatccatattcagtggttcaatcacaa 85195
>ref|NM_001054337.1| Oryza sativa (japonica cultivar-group) Os02g0693500 (Os02g0693500) mRNA, complete cds Length = 1190 Score = 194 bits (98), Expect = 6e-46 Identities = 251/302 (83%) Strand = Plus / Plus Query: 466 gtctttgctgcctccgctggtgcttcttcatgctatttcctgtcgaaactgattggaaaa 525 |||||||| ||| | ||||| |||||||||||||| |||||||| || |||||||| ||| Sbjct: 402 gtctttgccgccacggctggagcttcttcatgctacttcctgtctaagctgattgggaaa 461 Query: 526 ccgctggtgttcgtgttgtggccagacaaactcacgtttttccagaagcaggttgccaaa 585 ||| |||| ||| |||||||| |||||||| ||| || |||||||||||||| ||| Sbjct: 462 ccgttggtcttctcattgtggccggacaaacttgggttctttcagaagcaggttgcaaaa 521 Query: 586 agaagagaaaagctgttgaattacatgcttttcctgagggtcaccccaacattgccaaat 645 || ||||| |||||||||||||||||||||||||| || || || ||||||||||| ||| Sbjct: 522 aggagagagaagctgttgaattacatgcttttccttagagtaactccaacattgcccaat 581 Query: 646 accttcatcaacttagcatctcccattgttgatgtgcccttccataccttcttattggca 705 || |||||||| ||||| || || || || |||||||||| ||||| ||||| ||||| Sbjct: 582 actttcatcaatttagcgtcgccgatagtggatgtgccctaccatattttcttcctggca 641 Query: 706 actcttatcggtctcatcccagcagcctacgtgaccgtgagggctggcattgctctggga 765 || |||| || || |||||||| ||||| ||||| || |||||||| || ||| ||||| Sbjct: 642 acctttattggactaatcccagctgcctatgtgactgtcagggctggaatagctttggga 701 Query: 766 ga 767 || Sbjct: 702 ga 703 Score = 151 bits (76), Expect = 8e-33 Identities = 190/228 (83%) Strand = Plus / Plus Query: 189 cgccggggtcgccgccgtcttcgccgcgggcctcgtcggggtctacctctccatgccgga 248 |||||| ||||| |||| ||| ||| |||| |||||||| ||||||||||||||||| | Sbjct: 125 cgccggcgtcgcggccgcctttgccacgggtctcgtcggcgtctacctctccatgcctca 184 Query: 249 ctccgactacagcttcctcaagttgccccgcaacctccacgaactacaaatcctcactgg 308 || |||||||||||||||||| ||||| |||||||| || || ||||||||||| | Sbjct: 185 ttcggactacagcttcctcaagctgcccaagaacctccaggagctccaaatcctcacgga 244 Query: 309 ccatcttgagaactataccagtgactacaccgtacaggtgttgataggttactgtgctgt 368 ||||| ||| |||| || || ||||||||||| |||||| || | || || ||||| || Sbjct: 245 tcatctcgaggactacacgagcgactacaccgtgcaggtgctggtgggctattgtgccgt 304 Query: 369 atacatattcatgcagaccttcatgatcccagggacaatattcatgtc 416 ||||| ||||||||||| |||||||||||||| || ||||||||||| Sbjct: 305 gtacatcttcatgcagacgttcatgatcccaggaaccatattcatgtc 352
>dbj|AK103651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135D20, full insert sequence Length = 1193 Score = 194 bits (98), Expect = 6e-46 Identities = 251/302 (83%) Strand = Plus / Plus Query: 466 gtctttgctgcctccgctggtgcttcttcatgctatttcctgtcgaaactgattggaaaa 525 |||||||| ||| | ||||| |||||||||||||| |||||||| || |||||||| ||| Sbjct: 404 gtctttgccgccacggctggagcttcttcatgctacttcctgtctaagctgattgggaaa 463 Query: 526 ccgctggtgttcgtgttgtggccagacaaactcacgtttttccagaagcaggttgccaaa 585 ||| |||| ||| |||||||| |||||||| ||| || |||||||||||||| ||| Sbjct: 464 ccgttggtcttctcattgtggccggacaaacttgggttctttcagaagcaggttgcaaaa 523 Query: 586 agaagagaaaagctgttgaattacatgcttttcctgagggtcaccccaacattgccaaat 645 || ||||| |||||||||||||||||||||||||| || || || ||||||||||| ||| Sbjct: 524 aggagagagaagctgttgaattacatgcttttccttagagtaactccaacattgcccaat 583 Query: 646 accttcatcaacttagcatctcccattgttgatgtgcccttccataccttcttattggca 705 || |||||||| ||||| || || || || |||||||||| ||||| ||||| ||||| Sbjct: 584 actttcatcaatttagcgtcgccgatagtggatgtgccctaccatattttcttcctggca 643 Query: 706 actcttatcggtctcatcccagcagcctacgtgaccgtgagggctggcattgctctggga 765 || |||| || || |||||||| ||||| ||||| || |||||||| || ||| ||||| Sbjct: 644 acctttattggactaatcccagctgcctatgtgactgtcagggctggaatagctttggga 703 Query: 766 ga 767 || Sbjct: 704 ga 705 Score = 151 bits (76), Expect = 8e-33 Identities = 190/228 (83%) Strand = Plus / Plus Query: 189 cgccggggtcgccgccgtcttcgccgcgggcctcgtcggggtctacctctccatgccgga 248 |||||| ||||| |||| ||| ||| |||| |||||||| ||||||||||||||||| | Sbjct: 127 cgccggcgtcgcggccgcctttgccacgggtctcgtcggcgtctacctctccatgcctca 186 Query: 249 ctccgactacagcttcctcaagttgccccgcaacctccacgaactacaaatcctcactgg 308 || |||||||||||||||||| ||||| |||||||| || || ||||||||||| | Sbjct: 187 ttcggactacagcttcctcaagctgcccaagaacctccaggagctccaaatcctcacgga 246 Query: 309 ccatcttgagaactataccagtgactacaccgtacaggtgttgataggttactgtgctgt 368 ||||| ||| |||| || || ||||||||||| |||||| || | || || ||||| || Sbjct: 247 tcatctcgaggactacacgagcgactacaccgtgcaggtgctggtgggctattgtgccgt 306 Query: 369 atacatattcatgcagaccttcatgatcccagggacaatattcatgtc 416 ||||| ||||||||||| |||||||||||||| || ||||||||||| Sbjct: 307 gtacatcttcatgcagacgttcatgatcccaggaaccatattcatgtc 354
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 117 bits (59), Expect = 1e-22 Identities = 140/167 (83%) Strand = Plus / Minus Query: 574 caggttgccaaaagaagagaaaagctgttgaattacatgcttttcctgagggtcacccca 633 |||||||| ||||| ||||| |||||||||||||||||||||||||| || || || ||| Sbjct: 28497949 caggttgcaaaaaggagagagaagctgttgaattacatgcttttccttagagtaactcca 28497890 Query: 634 acattgccaaataccttcatcaacttagcatctcccattgttgatgtgcccttccatacc 693 |||||||| ||||| |||||||| ||||| || || || || |||||||||| ||||| Sbjct: 28497889 acattgcccaatactttcatcaatttagcgtcgccgatagtggatgtgccctaccatatt 28497830 Query: 694 ttcttattggcaactcttatcggtctcatcccagcagcctacgtgac 740 ||||| ||||||| |||| || || |||||||| ||||| ||||| Sbjct: 28497829 ttcttcctggcaacctttattggactaatcccagctgcctatgtgac 28497783 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 189 cgccggggtcgccgccgtcttcgccgcgggcctcgtcggggtctacctctccatgccgga 248 |||||| ||||| |||| ||| ||| |||| |||||||| ||||||||||||||||| | Sbjct: 28499692 cgccggcgtcgcggccgcctttgccacgggtctcgtcggcgtctacctctccatgcctca 28499633 Query: 249 ctccgactacagcttcctcaagttgccccgcaacctccacgaactacaaatcctcac 305 || |||||||||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 28499632 ttcggactacagcttcctcaagctgcccaagaacctccaggagctccaaatcctcac 28499576 Score = 77.8 bits (39), Expect = 9e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 310 catcttgagaactataccagtgactacaccgtacaggtgttgataggttactgtgctgta 369 ||||| ||| |||| || || ||||||||||| |||||| || | || || ||||| || Sbjct: 28498381 catctcgaggactacacgagcgactacaccgtgcaggtgctggtgggctattgtgccgtg 28498322 Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtc 416 ||||| ||||||||||| |||||||||||||| || ||||||||||| Sbjct: 28498321 tacatcttcatgcagacgttcatgatcccaggaaccatattcatgtc 28498275 Score = 73.8 bits (37), Expect = 1e-09 Identities = 94/113 (83%) Strand = Plus / Minus Query: 466 gtctttgctgcctccgctggtgcttcttcatgctatttcctgtcgaaactgattggaaaa 525 |||||||| ||| | ||||| |||||||||||||| |||||||| || |||||||| ||| Sbjct: 28498225 gtctttgccgccacggctggagcttcttcatgctacttcctgtctaagctgattgggaaa 28498166 Query: 526 ccgctggtgttcgtgttgtggccagacaaactcacgtttttccagaagcaggt 578 ||| |||| ||| |||||||| |||||||| ||| || ||||||||||| Sbjct: 28498165 ccgttggtcttctcattgtggccggacaaacttgggttctttcagaagcaggt 28498113
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1148_D05 Length = 155146 Score = 117 bits (59), Expect = 1e-22 Identities = 140/167 (83%) Strand = Plus / Minus Query: 574 caggttgccaaaagaagagaaaagctgttgaattacatgcttttcctgagggtcacccca 633 |||||||| ||||| ||||| |||||||||||||||||||||||||| || || || ||| Sbjct: 122070 caggttgcaaaaaggagagagaagctgttgaattacatgcttttccttagagtaactcca 122011 Query: 634 acattgccaaataccttcatcaacttagcatctcccattgttgatgtgcccttccatacc 693 |||||||| ||||| |||||||| ||||| || || || || |||||||||| ||||| Sbjct: 122010 acattgcccaatactttcatcaatttagcgtcgccgatagtggatgtgccctaccatatt 121951 Query: 694 ttcttattggcaactcttatcggtctcatcccagcagcctacgtgac 740 ||||| ||||||| |||| || || |||||||| ||||| ||||| Sbjct: 121950 ttcttcctggcaacctttattggactaatcccagctgcctatgtgac 121904 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 189 cgccggggtcgccgccgtcttcgccgcgggcctcgtcggggtctacctctccatgccgga 248 |||||| ||||| |||| ||| ||| |||| |||||||| ||||||||||||||||| | Sbjct: 123813 cgccggcgtcgcggccgcctttgccacgggtctcgtcggcgtctacctctccatgcctca 123754 Query: 249 ctccgactacagcttcctcaagttgccccgcaacctccacgaactacaaatcctcac 305 || |||||||||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 123753 ttcggactacagcttcctcaagctgcccaagaacctccaggagctccaaatcctcac 123697 Score = 77.8 bits (39), Expect = 9e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 310 catcttgagaactataccagtgactacaccgtacaggtgttgataggttactgtgctgta 369 ||||| ||| |||| || || ||||||||||| |||||| || | || || ||||| || Sbjct: 122502 catctcgaggactacacgagcgactacaccgtgcaggtgctggtgggctattgtgccgtg 122443 Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtc 416 ||||| ||||||||||| |||||||||||||| || ||||||||||| Sbjct: 122442 tacatcttcatgcagacgttcatgatcccaggaaccatattcatgtc 122396 Score = 73.8 bits (37), Expect = 1e-09 Identities = 94/113 (83%) Strand = Plus / Minus Query: 466 gtctttgctgcctccgctggtgcttcttcatgctatttcctgtcgaaactgattggaaaa 525 |||||||| ||| | ||||| |||||||||||||| |||||||| || |||||||| ||| Sbjct: 122346 gtctttgccgccacggctggagcttcttcatgctacttcctgtctaagctgattgggaaa 122287 Query: 526 ccgctggtgttcgtgttgtggccagacaaactcacgtttttccagaagcaggt 578 ||| |||| ||| |||||||| |||||||| ||| || ||||||||||| Sbjct: 122286 ccgttggtcttctcattgtggccggacaaacttgggttctttcagaagcaggt 122234
>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017H11 Length = 158374 Score = 117 bits (59), Expect = 1e-22 Identities = 140/167 (83%) Strand = Plus / Minus Query: 574 caggttgccaaaagaagagaaaagctgttgaattacatgcttttcctgagggtcacccca 633 |||||||| ||||| ||||| |||||||||||||||||||||||||| || || || ||| Sbjct: 66790 caggttgcaaaaaggagagagaagctgttgaattacatgcttttccttagagtaactcca 66731 Query: 634 acattgccaaataccttcatcaacttagcatctcccattgttgatgtgcccttccatacc 693 |||||||| ||||| |||||||| ||||| || || || || |||||||||| ||||| Sbjct: 66730 acattgcccaatactttcatcaatttagcgtcgccgatagtggatgtgccctaccatatt 66671 Query: 694 ttcttattggcaactcttatcggtctcatcccagcagcctacgtgac 740 ||||| ||||||| |||| || || |||||||| ||||| ||||| Sbjct: 66670 ttcttcctggcaacctttattggactaatcccagctgcctatgtgac 66624 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 189 cgccggggtcgccgccgtcttcgccgcgggcctcgtcggggtctacctctccatgccgga 248 |||||| ||||| |||| ||| ||| |||| |||||||| ||||||||||||||||| | Sbjct: 68533 cgccggcgtcgcggccgcctttgccacgggtctcgtcggcgtctacctctccatgcctca 68474 Query: 249 ctccgactacagcttcctcaagttgccccgcaacctccacgaactacaaatcctcac 305 || |||||||||||||||||| ||||| |||||||| || || ||||||||||| Sbjct: 68473 ttcggactacagcttcctcaagctgcccaagaacctccaggagctccaaatcctcac 68417 Score = 77.8 bits (39), Expect = 9e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 310 catcttgagaactataccagtgactacaccgtacaggtgttgataggttactgtgctgta 369 ||||| ||| |||| || || ||||||||||| |||||| || | || || ||||| || Sbjct: 67222 catctcgaggactacacgagcgactacaccgtgcaggtgctggtgggctattgtgccgtg 67163 Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtc 416 ||||| ||||||||||| |||||||||||||| || ||||||||||| Sbjct: 67162 tacatcttcatgcagacgttcatgatcccaggaaccatattcatgtc 67116 Score = 73.8 bits (37), Expect = 1e-09 Identities = 94/113 (83%) Strand = Plus / Minus Query: 466 gtctttgctgcctccgctggtgcttcttcatgctatttcctgtcgaaactgattggaaaa 525 |||||||| ||| | ||||| |||||||||||||| |||||||| || |||||||| ||| Sbjct: 67066 gtctttgccgccacggctggagcttcttcatgctacttcctgtctaagctgattgggaaa 67007 Query: 526 ccgctggtgttcgtgttgtggccagacaaactcacgtttttccagaagcaggt 578 ||| |||| ||| |||||||| |||||||| ||| || ||||||||||| Sbjct: 67006 ccgttggtcttctcattgtggccggacaaacttgggttctttcagaagcaggt 66954
>gb|AY111969.1| Zea mays CL40336_1 mRNA sequence Length = 777 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 368 tatacatattcatgcagaccttcatgatcccagggacaatattcatgtcattgcttgctg 427 ||||||| |||||||| || ||||||||||| ||||||||||||||||| || ||||||| Sbjct: 680 tatacatcttcatgcaaacattcatgatccctgggacaatattcatgtctttacttgctg 621 Query: 428 gtgctc 433 | |||| Sbjct: 620 gggctc 615
>gb|AC119413.16| Medicago truncatula clone mth2-19p2, complete sequence Length = 113431 Score = 65.9 bits (33), Expect = 4e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 313 cttgagaactataccagtgactacaccgtacaggtgttgataggttactgtgctgtatac 372 ||||||| |||||| ||||||||||| | ||| || ||| | || ||||| | || || Sbjct: 40924 cttgagagctatacaagtgactacactgcacaagtcttggtgggatactgcgtggtttat 40983 Query: 373 atattcatgcagaccttcatgatcccagggacaatattcatgtcattgcttgc 425 || ||||||||||| |||||||| |||||||| | ||||||||||||||||| Sbjct: 40984 attttcatgcagactttcatgattccagggactgtgttcatgtcattgcttgc 41036
>emb|CR954195.2| Medicago truncatula chromosome 5 clone mth2-16p13, COMPLETE SEQUENCE Length = 116834 Score = 65.9 bits (33), Expect = 4e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 313 cttgagaactataccagtgactacaccgtacaggtgttgataggttactgtgctgtatac 372 ||||||| |||||| ||||||||||| | ||| || ||| | || ||||| | || || Sbjct: 84284 cttgagagctatacaagtgactacactgcacaagtcttggtgggatactgcgtggtttat 84343 Query: 373 atattcatgcagaccttcatgatcccagggacaatattcatgtcattgcttgc 425 || ||||||||||| |||||||| |||||||| | ||||||||||||||||| Sbjct: 84344 attttcatgcagactttcatgattccagggactgtgttcatgtcattgcttgc 84396
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 573 gcaggttgccaaaagaagagaaaagctgttgaattacatgctttt 617 |||| |||||||||| | ||||||||| ||||||||||||||||| Sbjct: 20714 gcagattgccaaaaggaaagaaaagctattgaattacatgctttt 20670 Score = 54.0 bits (27), Expect = 0.001 Identities = 57/67 (85%) Strand = Plus / Minus Query: 368 tatacatattcatgcagaccttcatgatcccagggacaatattcatgtcattgcttgctg 427 ||||||| || ||||| || || |||||||| || |||||||||||||| || ||||||| Sbjct: 21050 tatacatctttatgcaaacatttatgatccctggaacaatattcatgtctttacttgctg 20991 Query: 428 gtgctct 434 | ||||| Sbjct: 20990 gagctct 20984
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 58.0 bits (29), Expect = 9e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 573 gcaggttgccaaaagaagagaaaagctgttgaattacatgctttt 617 |||| |||||||||| | ||||||||| ||||||||||||||||| Sbjct: 28095636 gcagattgccaaaaggaaagaaaagctattgaattacatgctttt 28095680 Score = 54.0 bits (27), Expect = 0.001 Identities = 57/67 (85%) Strand = Plus / Plus Query: 368 tatacatattcatgcagaccttcatgatcccagggacaatattcatgtcattgcttgctg 427 ||||||| || ||||| || || |||||||| || |||||||||||||| || ||||||| Sbjct: 28095300 tatacatctttatgcaaacatttatgatccctggaacaatattcatgtctttacttgctg 28095359 Query: 428 gtgctct 434 | ||||| Sbjct: 28095360 gagctct 28095366 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 cgctcggcgccggggtcgccgc 203 |||||||||||||||||||||| Sbjct: 28563629 cgctcggcgccggggtcgccgc 28563650
>emb|CT834389.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA117I21, full insert sequence Length = 1198 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 578 ttgccaaaagaagagaaaagctgttgaattacatgctttt 617 |||||||||| | ||||||||| ||||||||||||||||| Sbjct: 727 ttgccaaaaggaaagaaaagctattgaattacatgctttt 766 Score = 54.0 bits (27), Expect = 0.001 Identities = 57/67 (85%) Strand = Plus / Plus Query: 368 tatacatattcatgcagaccttcatgatcccagggacaatattcatgtcattgcttgctg 427 ||||||| || ||||| || || |||||||| || |||||||||||||| || ||||||| Sbjct: 517 tatacatctttatgcaaacatttatgatccctggaacaatattcatgtctttacttgctg 576 Query: 428 gtgctct 434 | ||||| Sbjct: 577 gagctct 583
>ref|NM_001057554.1| Oryza sativa (japonica cultivar-group) Os03g0703900 (Os03g0703900) mRNA, complete cds Length = 1361 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 578 ttgccaaaagaagagaaaagctgttgaattacatgctttt 617 |||||||||| | ||||||||| ||||||||||||||||| Sbjct: 741 ttgccaaaaggaaagaaaagctattgaattacatgctttt 780 Score = 54.0 bits (27), Expect = 0.001 Identities = 57/67 (85%) Strand = Plus / Plus Query: 368 tatacatattcatgcagaccttcatgatcccagggacaatattcatgtcattgcttgctg 427 ||||||| || ||||| || || |||||||| || |||||||||||||| || ||||||| Sbjct: 531 tatacatctttatgcaaacatttatgatccctggaacaatattcatgtctttacttgctg 590 Query: 428 gtgctct 434 | ||||| Sbjct: 591 gagctct 597
>dbj|AK073877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073B06, full insert sequence Length = 1366 Score = 56.0 bits (28), Expect = 3e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 578 ttgccaaaagaagagaaaagctgttgaattacatgctttt 617 |||||||||| | ||||||||| ||||||||||||||||| Sbjct: 746 ttgccaaaaggaaagaaaagctattgaattacatgctttt 785 Score = 54.0 bits (27), Expect = 0.001 Identities = 57/67 (85%) Strand = Plus / Plus Query: 368 tatacatattcatgcagaccttcatgatcccagggacaatattcatgtcattgcttgctg 427 ||||||| || ||||| || || |||||||| || |||||||||||||| || ||||||| Sbjct: 536 tatacatctttatgcaaacatttatgatccctggaacaatattcatgtctttacttgctg 595 Query: 428 gtgctct 434 | ||||| Sbjct: 596 gagctct 602
>ref|XM_001214039.1| Aspergillus terreus NIH2624 predicted protein (ATEG_04861) mRNA, complete cds Length = 780 Score = 50.1 bits (25), Expect = 0.021 Identities = 28/29 (96%) Strand = Plus / Minus Query: 177 ggccgcgctcggcgccggggtcgccgccg 205 ||||||||||||||| ||||||||||||| Sbjct: 663 ggccgcgctcggcgcaggggtcgccgccg 635
>ref|NM_117889.2| Arabidopsis thaliana unknown protein (AT4G17790) mRNA, complete cds Length = 1288 Score = 48.1 bits (24), Expect = 0.085 Identities = 48/56 (85%) Strand = Plus / Plus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctct 434 |||||||| |||||||| || || || | |||||||| ||||||||||||||||| Sbjct: 675 atgcagacgttcatgattcctggaactgtgttcatgtctttgcttgctggtgctct 730
>ref|NM_105852.2| Arabidopsis thaliana unknown protein (AT1G71940) mRNA, complete cds Length = 1302 Score = 48.1 bits (24), Expect = 0.085 Identities = 42/48 (87%) Strand = Plus / Plus Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtca 417 ||||| || ||||||||||| ||||| |||||||| || ||||||||| Sbjct: 511 tacatttttatgcagacctttatgattccagggactatcttcatgtca 558
>gb|AC183492.1| Brassica oleracea Contig G, complete sequence Length = 236640 Score = 48.1 bits (24), Expect = 0.085 Identities = 48/56 (85%) Strand = Plus / Plus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctct 434 |||||||| |||||||| || || || | |||||||| ||||||||||||||||| Sbjct: 110385 atgcagacattcatgattcccggaactgtcttcatgtctttgcttgctggtgctct 110440
>dbj|AK221349.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL25-26-G21 Length = 1069 Score = 48.1 bits (24), Expect = 0.085 Identities = 48/56 (85%) Strand = Plus / Plus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctct 434 |||||||| |||||||| || || || | |||||||| ||||||||||||||||| Sbjct: 446 atgcagacgttcatgattcctggaactgtgttcatgtctttgcttgctggtgctct 501
>gb|AY097420.1| Arabidopsis thaliana At1g71940/F17M19_9 mRNA, complete cds Length = 819 Score = 48.1 bits (24), Expect = 0.085 Identities = 42/48 (87%) Strand = Plus / Plus Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtca 417 ||||| || ||||||||||| ||||| |||||||| || ||||||||| Sbjct: 310 tacatttttatgcagacctttatgattccagggactatcttcatgtca 357
>gb|AY075668.1| Arabidopsis thaliana At1g71940/F17M19_9 mRNA, complete cds Length = 1246 Score = 48.1 bits (24), Expect = 0.085 Identities = 42/48 (87%) Strand = Plus / Plus Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtca 417 ||||| || ||||||||||| ||||| |||||||| || ||||||||| Sbjct: 511 tacatttttatgcagacctttatgattccagggactatcttcatgtca 558
>emb|Z97344.2|ATFCA9 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 9 Length = 81835 Score = 48.1 bits (24), Expect = 0.085 Identities = 48/56 (85%) Strand = Plus / Plus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctct 434 |||||||| |||||||| || || || | |||||||| ||||||||||||||||| Sbjct: 57327 atgcagacgttcatgattcctggaactgtgttcatgtctttgcttgctggtgctct 57382
>gb|AY087743.1| Arabidopsis thaliana clone 38138 mRNA, complete sequence Length = 1270 Score = 48.1 bits (24), Expect = 0.085 Identities = 42/48 (87%) Strand = Plus / Plus Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtca 417 ||||| || ||||||||||| ||||| |||||||| || ||||||||| Sbjct: 479 tacatttttatgcagacctttatgattccagggactatcttcatgtca 526
>gb|AC123704.21| Mus musculus chromosome 15, clone RP23-351F24, complete sequence Length = 202330 Score = 48.1 bits (24), Expect = 0.085 Identities = 27/28 (96%) Strand = Plus / Minus Query: 4 gagaggagagaaaggaaggaaagggagc 31 |||||||||||||||||| ||||||||| Sbjct: 70783 gagaggagagaaaggaagaaaagggagc 70756
>emb|AL161547.2|ATCHRIV47 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 47 Length = 198067 Score = 48.1 bits (24), Expect = 0.085 Identities = 48/56 (85%) Strand = Plus / Plus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctct 434 |||||||| |||||||| || || || | |||||||| ||||||||||||||||| Sbjct: 52339 atgcagacgttcatgattcctggaactgtgttcatgtctttgcttgctggtgctct 52394
>gb|AC021665.7|AC021665 Arabidopsis thaliana chromosome 1 BAC F17M19 genomic sequence, complete sequence Length = 80413 Score = 48.1 bits (24), Expect = 0.085 Identities = 42/48 (87%) Strand = Plus / Plus Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtca 417 ||||| || ||||||||||| ||||| |||||||| || ||||||||| Sbjct: 51551 tacatttttatgcagacctttatgattccagggactatcttcatgtca 51598
>dbj|AK176503.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-02-I16 Length = 1050 Score = 48.1 bits (24), Expect = 0.085 Identities = 48/56 (85%) Strand = Plus / Plus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctct 434 |||||||| |||||||| || || || | |||||||| ||||||||||||||||| Sbjct: 414 atgcagacgttcatgattcctggaactgtgttcatgtctttgcttgctggtgctct 469
>dbj|AK175741.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL22-29-A12 Length = 1067 Score = 48.1 bits (24), Expect = 0.085 Identities = 48/56 (85%) Strand = Plus / Plus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctct 434 |||||||| |||||||| || || || | |||||||| ||||||||||||||||| Sbjct: 445 atgcagacgttcatgattcctggaactgtgttcatgtctttgcttgctggtgctct 500
>dbj|AK175186.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL21-60-F06 Length = 1062 Score = 48.1 bits (24), Expect = 0.085 Identities = 48/56 (85%) Strand = Plus / Plus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctct 434 |||||||| |||||||| || || || | |||||||| ||||||||||||||||| Sbjct: 439 atgcagacgttcatgattcctggaactgtgttcatgtctttgcttgctggtgctct 494
>emb|BX814967.1|CNS0ABH8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZE07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1229 Score = 48.1 bits (24), Expect = 0.085 Identities = 42/48 (87%) Strand = Plus / Plus Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtca 417 ||||| || ||||||||||| ||||| |||||||| || ||||||||| Sbjct: 474 tacatttttatgcagacctttatgattccagggactatcttcatgtca 521
>emb|BX826629.1|CNS0A3BE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB49ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 925 Score = 48.1 bits (24), Expect = 0.085 Identities = 48/56 (85%) Strand = Plus / Plus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctct 434 |||||||| |||||||| || || || | |||||||| ||||||||||||||||| Sbjct: 311 atgcagacgttcatgattcctggaactgtgttcatgtctttgcttgctggtgctct 366
>emb|BX841961.1|CNS09Y5H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL63ZB12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1103 Score = 48.1 bits (24), Expect = 0.085 Identities = 42/48 (87%) Strand = Plus / Plus Query: 370 tacatattcatgcagaccttcatgatcccagggacaatattcatgtca 417 ||||| || ||||||||||| ||||| |||||||| || ||||||||| Sbjct: 483 tacatttttatgcagacctttatgattccagggactatcttcatgtca 530
>emb|AL714021.12| Mouse DNA sequence from clone RP23-305F20 on chromosome X, complete sequence Length = 182607 Score = 48.1 bits (24), Expect = 0.085 Identities = 24/24 (100%) Strand = Plus / Plus Query: 5 agaggagagaaaggaaggaaaggg 28 |||||||||||||||||||||||| Sbjct: 53599 agaggagagaaaggaaggaaaggg 53622
>gb|AC127269.3| Mus musculus BAC clone RP23-432B20 from chromosome 9, complete sequence Length = 212660 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1157 atctgggaagcacaatgcccatc 1179 ||||||||||||||||||||||| Sbjct: 160426 atctgggaagcacaatgcccatc 160404
>gb|AC125354.4| Mus musculus BAC clone RP23-302B8 from 8, complete sequence Length = 159941 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 agagaggagagaaaggaaggaaa 25 ||||||||||||||||||||||| Sbjct: 105590 agagaggagagaaaggaaggaaa 105612
>gb|AC156503.1| Mus musculus BAC clone RP23-272M11 from 9, complete sequence Length = 162078 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1157 atctgggaagcacaatgcccatc 1179 ||||||||||||||||||||||| Sbjct: 53653 atctgggaagcacaatgcccatc 53631
>emb|AL583891.15| Mouse DNA sequence from clone RP23-292L2 on chromosome 15, complete sequence Length = 170132 Score = 46.1 bits (23), Expect = 0.33 Identities = 23/23 (100%) Strand = Plus / Minus Query: 4 gagaggagagaaaggaaggaaag 26 ||||||||||||||||||||||| Sbjct: 134987 gagaggagagaaaggaaggaaag 134965
>tpg|BK001744.1| TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 cgccgccgtcttcgccgcgggc 219 |||||||||||||||||||||| Sbjct: 53090 cgccgccgtcttcgccgcgggc 53111
>gb|AC183299.2| Pan troglodytes BAC clone CH251-263C8 from chromosome 17, complete sequence Length = 170313 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 agagaggagagaaaggaaggaa 24 |||||||||||||||||||||| Sbjct: 45411 agagaggagagaaaggaaggaa 45432
>ref|NM_117026.3| Arabidopsis thaliana unknown protein (AT4G09580) mRNA, complete cds Length = 1305 Score = 44.1 bits (22), Expect = 1.3 Identities = 52/62 (83%) Strand = Plus / Plus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctctattc 438 |||||||| || ||||| || || || || || ||||||||||||||||| ||||| ||| Sbjct: 436 atgcagacatttatgatacctggaacgatctttatgtcattgcttgctggagctcttttc 495 Query: 439 gg 440 || Sbjct: 496 gg 497
>gb|AC132681.5| Mus musculus BAC clone RP23-442K13 from chromosome 3, complete sequence Length = 190938 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 5 agaggagagaaaggaaggaaagggag 30 |||||| ||||||||||||||||||| Sbjct: 50009 agaggaaagaaaggaaggaaagggag 49984
>gb|AC113127.6| Mus musculus chromosome 9, clone RP23-352H13, complete sequence Length = 185801 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 2 gagagaggagagaaaggaaggaaagg 27 |||| ||||||||||||||||||||| Sbjct: 133161 gagaaaggagagaaaggaaggaaagg 133136
>gb|AC164882.2| Mus musculus BAC clone RP23-88F16 from chromosome 9, complete sequence Length = 203020 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 2 gagagaggagagaaaggaaggaaagg 27 |||| ||||||||||||||||||||| Sbjct: 185909 gagaaaggagagaaaggaaggaaagg 185934
>gb|AY114042.1| Arabidopsis thaliana unknown protein (At4g09580) mRNA, complete cds Length = 895 Score = 44.1 bits (22), Expect = 1.3 Identities = 52/62 (83%) Strand = Plus / Plus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctctattc 438 |||||||| || ||||| || || || || || ||||||||||||||||| ||||| ||| Sbjct: 364 atgcagacatttatgatacctggaacgatctttatgtcattgcttgctggagctcttttc 423 Query: 439 gg 440 || Sbjct: 424 gg 425
>gb|AY096649.1| Arabidopsis thaliana unknown protein (At4g09580) mRNA, complete cds Length = 1321 Score = 44.1 bits (22), Expect = 1.3 Identities = 52/62 (83%) Strand = Plus / Plus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctctattc 438 |||||||| || ||||| || || || || || ||||||||||||||||| ||||| ||| Sbjct: 436 atgcagacatttatgatacctggaacgatctttatgtcattgcttgctggagctcttttc 495 Query: 439 gg 440 || Sbjct: 496 gg 497
>gb|AE012057.1| Xanthomonas axonopodis pv. citri str. 306, section 435 of 469 of the complete genome Length = 12791 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 179 ccgcgctcggcgccggggtcgccgcc 204 ||||||||||||||||| |||||||| Sbjct: 8077 ccgcgctcggcgccgggctcgccgcc 8102
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 gtcgccgccgtcttcgccgcgg 217 |||||||||||||||||||||| Sbjct: 6113263 gtcgccgccgtcttcgccgcgg 6113284
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 196 gtcgccgccgtcttcgccgcgg 217 |||||||||||||||||||||| Sbjct: 36104072 gtcgccgccgtcttcgccgcgg 36104051
>emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27 Length = 197394 Score = 44.1 bits (22), Expect = 1.3 Identities = 52/62 (83%) Strand = Plus / Minus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctctattc 438 |||||||| || ||||| || || || || || ||||||||||||||||| ||||| ||| Sbjct: 70995 atgcagacatttatgatacctggaacgatctttatgtcattgcttgctggagctcttttc 70936 Query: 439 gg 440 || Sbjct: 70935 gg 70934
>emb|AL161831.1|ATT25P22 Arabidopsis thaliana DNA chromosome 4, BAC clone T25P22 (ESSA project) Length = 97876 Score = 44.1 bits (22), Expect = 1.3 Identities = 52/62 (83%) Strand = Plus / Minus Query: 379 atgcagaccttcatgatcccagggacaatattcatgtcattgcttgctggtgctctattc 438 |||||||| || ||||| || || || || || ||||||||||||||||| ||||| ||| Sbjct: 23837 atgcagacatttatgatacctggaacgatctttatgtcattgcttgctggagctcttttc 23778 Query: 439 gg 440 || Sbjct: 23777 gg 23776
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 196 gtcgccgccgtcttcgccgcgg 217 |||||||||||||||||||||| Sbjct: 116797 gtcgccgccgtcttcgccgcgg 116776
>gb|AC110758.3| Homo sapiens BAC clone RP11-24D11 from 4, complete sequence Length = 165028 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 ggagagaggagagaaaggaaggaaagggag 30 ||||||||||||||| |||||| ||||||| Sbjct: 159119 ggagagaggagagaagggaagggaagggag 159148
>gb|AC082645.13|AC082645 Oryza sativa chromosome 3 BAC OSJNBb0033N16 genomic sequence, complete sequence Length = 143681 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 182 cgctcggcgccggggtcgccgc 203 |||||||||||||||||||||| Sbjct: 66435 cgctcggcgccggggtcgccgc 66456
>emb|AJ781761.1| Gerbera hybrida gtk16 gene, variety Terra Regina Length = 1317 Score = 44.1 bits (22), Expect = 1.3 Identities = 28/30 (93%) Strand = Plus / Plus Query: 603 gaattacatgcttttcctgagggtcacccc 632 |||||||||||||||| ||||||| ||||| Sbjct: 665 gaattacatgcttttcttgagggtgacccc 694
>dbj|AP005818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0009H03 Length = 151685 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 gtcgccgccgtcttcgccgcgg 217 |||||||||||||||||||||| Sbjct: 1163 gtcgccgccgtcttcgccgcgg 1184
>dbj|AP006527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0603H10 Length = 137828 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 196 gtcgccgccgtcttcgccgcgg 217 |||||||||||||||||||||| Sbjct: 110837 gtcgccgccgtcttcgccgcgg 110858
>gb|AC104772.3| Homo sapiens BAC clone RP11-3I22 from 2, complete sequence Length = 106526 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 agagaggagagaaaggaaggaa 24 |||||||||||||||||||||| Sbjct: 85121 agagaggagagaaaggaaggaa 85142
>gb|AC124979.8| Mus musculus chromosome 3, clone RP24-117N14, complete sequence Length = 187567 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Minus Query: 5 agaggagagaaaggaaggaaagggag 30 |||||| ||||||||||||||||||| Sbjct: 182823 agaggaaagaaaggaaggaaagggag 182798
>gb|AF158096.1|AF158096 Pseudorabies virus early envelope protein (prv43) gene, complete cds Length = 1356 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 cgccgccgtcttcgccgcgggc 219 |||||||||||||||||||||| Sbjct: 454 cgccgccgtcttcgccgcgggc 475
>emb|CR932058.7| Zebrafish DNA sequence from clone DKEY-22M14 in linkage group 11, complete sequence Length = 151285 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 gagaggagagaaaggaaggaaa 25 |||||||||||||||||||||| Sbjct: 141178 gagaggagagaaaggaaggaaa 141157
>gb|M77761.1|SH1PRV Pseudorabies virus Prv43 protein (prv43) gene, complete cds Length = 1361 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 cgccgccgtcttcgccgcgggc 219 |||||||||||||||||||||| Sbjct: 459 cgccgccgtcttcgccgcgggc 480
>gb|CP000459.1| Burkholderia cenocepacia HI2424 chromosome 2, complete genome Length = 2998664 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 cgctcggcgccggggtcgccgccgt 206 |||||||||||| |||||||||||| Sbjct: 1080109 cgctcggcgccgcggtcgccgccgt 1080133
>dbj|AK240646.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J023003H01, full insert sequence Length = 2888 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 acctctccatgccggactccg 253 ||||||||||||||||||||| Sbjct: 1942 acctctccatgccggactccg 1922
>ref|NM_001063568.1| Oryza sativa (japonica cultivar-group) Os06g0192000 (Os06g0192000) mRNA, complete cds Length = 1969 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 acctctccatgccggactccg 253 ||||||||||||||||||||| Sbjct: 1115 acctctccatgccggactccg 1095
>ref|NM_001063567.1| Oryza sativa (japonica cultivar-group) Os06g0191900 (Os06g0191900) mRNA, complete cds Length = 2412 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 acctctccatgccggactccg 253 ||||||||||||||||||||| Sbjct: 800 acctctccatgccggactccg 820
>gb|AC189358.1| Brassica rapa subsp. pekinensis clone KBrB044E18, complete sequence Length = 143253 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1105 gggaacactgtttcatttcat 1125 ||||||||||||||||||||| Sbjct: 25239 gggaacactgtttcatttcat 25259
>gb|CP000379.1| Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence Length = 2788459 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 cgctcggcgccggggtcgccgccgt 206 |||||||||||| |||||||||||| Sbjct: 1401006 cgctcggcgccgcggtcgccgccgt 1400982
>gb|AC116577.6| Mus musculus BAC clone RP23-264N13 from chromosome 9, complete sequence Length = 194030 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 gagaggagagaaaggaaggaa 24 ||||||||||||||||||||| Sbjct: 121238 gagaggagagaaaggaaggaa 121258
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 957 atgcggcggcttcattggatttggg 981 ||||||||||||||| ||||||||| Sbjct: 847819 atgcggcggcttcatcggatttggg 847795
>gb|AC151369.4| Aotus nancymaae clone CH258-279B4, complete sequence Length = 196485 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 gagaggagagaaaggaaggaa 24 ||||||||||||||||||||| Sbjct: 162633 gagaggagagaaaggaaggaa 162653
>gb|AC162690.2| Mus musculus chromosome 5, clone RP24-170F2, complete sequence Length = 180370 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 8 ggagagaaaggaaggaaagggagcc 32 |||||||||||||||||||| |||| Sbjct: 18966 ggagagaaaggaaggaaaggaagcc 18942
>gb|AC160533.6| Mus musculus chromosome 5, clone RP24-242L17, complete sequence Length = 170409 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 ggagagaaaggaaggaaagggagcc 32 |||||||||||||||||||| |||| Sbjct: 13643 ggagagaaaggaaggaaaggaagcc 13667
>gb|AC136699.23| Mus musculus chromosome 9, clone RP23-18E24, complete sequence Length = 229184 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ggagagaggagagaaaggaag 21 ||||||||||||||||||||| Sbjct: 34623 ggagagaggagagaaaggaag 34603
>gb|AC093483.6| Mus musculus chromosome 9, clone RP23-79K5, complete sequence Length = 262048 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 gagagaggagagaaaggaaggaaag 26 ||||||||| ||||||||||||||| Sbjct: 237360 gagagaggaaagaaaggaaggaaag 237336
>gb|AC144401.2| Didelphis virginiana clone LBNL3-270H19, complete sequence Length = 180378 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gagagaaaggaaggaaaggga 29 ||||||||||||||||||||| Sbjct: 85587 gagagaaaggaaggaaaggga 85567
>gb|AC123846.5| Mus musculus BAC clone RP23-435B22 from chromosome 2, complete sequence Length = 221128 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 aaagaagagaaaagctgttga 604 ||||||||||||||||||||| Sbjct: 123190 aaagaagagaaaagctgttga 123170
>gb|AC164090.3| Mus musculus BAC clone RP23-403F3 from chromosome 6, complete sequence Length = 189441 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gagagaaaggaaggaaaggga 29 ||||||||||||||||||||| Sbjct: 69850 gagagaaaggaaggaaaggga 69870
>dbj|AK038585.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230047M05 product:similar to BICAUDAL D (DROSOPHILA) HOMOLOG 1 [Homo sapiens], full insert sequence Length = 4000 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gagagaaaggaaggaaaggga 29 ||||||||||||||||||||| Sbjct: 1551 gagagaaaggaaggaaaggga 1531
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 acctctccatgccggactccg 253 ||||||||||||||||||||| Sbjct: 4654070 acctctccatgccggactccg 4654050
>emb|AL589655.5| Human DNA sequence from clone RP11-420A21 on chromosome 6 Contains a pseudogene similar to an integrin Alpha-E precursor fragment and part of the TEX27 gene for testis expressed sequence 27 (FLJ13222), complete sequence Length = 160789 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 4 gagaggagagaaaggaaggaa 24 ||||||||||||||||||||| Sbjct: 44125 gagaggagagaaaggaaggaa 44105
>emb|AL138956.17| Human DNA sequence from clone RP11-16D22 on chromosome 13 Contains the 5' end of a novel gene, complete sequence Length = 165257 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 996 gaggcggatgacacatggttt 1016 ||||||||||||||||||||| Sbjct: 41451 gaggcggatgacacatggttt 41431
>emb|AL078624.24|HSDJ799G3 Human DNA sequence from clone RP4-799G3 on chromosome 1q42.11-42.3 Contains STSs and GSSs, complete sequence Length = 127639 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 605 attacatgcttttcctgaggg 625 ||||||||||||||||||||| Sbjct: 109662 attacatgcttttcctgaggg 109682
>gb|AC154357.2| Mus musculus BAC clone RP23-192E11 from chromosome 9, complete sequence Length = 195151 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ggagagaggagagaaaggaag 21 ||||||||||||||||||||| Sbjct: 183281 ggagagaggagagaaaggaag 183261
>gb|AY088192.1| Arabidopsis thaliana clone 42815 mRNA, complete sequence Length = 1063 Score = 42.1 bits (21), Expect = 5.2 Identities = 78/97 (80%) Strand = Plus / Plus Query: 602 tgaattacatgcttttcctgagggtcaccccaacattgccaaataccttcatcaacttag 661 ||||||| ||||| ||| ||||| | || ||||||||||| || || ||||| || | | Sbjct: 670 tgaattatatgctgttcttgaggctaacaccaacattgcctaacactttcattaatgttg 729 Query: 662 catctcccattgttgatgtgcccttccataccttctt 698 | ||||| ||||||||||| || | ||||| |||||| Sbjct: 730 cttctccaattgttgatgttccttaccatatcttctt 766
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 cgcgctcggcgccggggtcgccgcc 204 ||||||||||||||||| ||||||| Sbjct: 2779789 cgcgctcggcgccgggggcgccgcc 2779765
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 ggccgcgctcggcgccggggt 197 ||||||||||||||||||||| Sbjct: 114408 ggccgcgctcggcgccggggt 114388
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 gaggccgcgctcggcgccggg 195 ||||||||||||||||||||| Sbjct: 183956 gaggccgcgctcggcgccggg 183976
>gb|AC007341.10| Homo sapiens chromosome 16 clone RP11-381L15, complete sequence Length = 168612 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 aggagagaaaggaaggaaagg 27 ||||||||||||||||||||| Sbjct: 135322 aggagagaaaggaaggaaagg 135302
>gb|AC150262.4| Aedes aegypti, clone XX-60C14, complete sequence Length = 100663 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1312 atattcagtgattcaatgacaattt 1336 ||||||||||||||||||| ||||| Sbjct: 34875 atattcagtgattcaatgagaattt 34851
>gb|AC008760.7| Homo sapiens chromosome 19 clone CTD-3128G10, complete sequence Length = 200167 Score = 42.1 bits (21), Expect = 5.2 Identities = 33/37 (89%) Strand = Plus / Minus Query: 3 agagaggagagaaaggaaggaaagggagccgaggaaa 39 |||||||||||||||||| || |||||| ||||||| Sbjct: 90428 agagaggagagaaaggaaagacagggaggggaggaaa 90392
>gb|AC156283.6| Mus musculus 6 BAC RP24-327I4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172188 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 ggagagaggagagaaaggaag 21 ||||||||||||||||||||| Sbjct: 130999 ggagagaggagagaaaggaag 130979
>gb|AF546155.1| Streptomyces macromomyceticus UnbL (unbL), UnbV (unbV), UnbU (unbU), PksE (pksE), and TebC (tebC) genes, complete cds Length = 10514 Score = 42.1 bits (21), Expect = 5.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 180 cgcgctcggcgccggggtcgccgccgtct 208 |||| |||||||||| ||||||||||||| Sbjct: 3739 cgcgttcggcgccggtgtcgccgccgtct 3767
>dbj|AP004738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0090D06 Length = 174500 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 acctctccatgccggactccg 253 ||||||||||||||||||||| Sbjct: 141434 acctctccatgccggactccg 141414
>dbj|AP003514.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0698A06 Length = 156514 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 acctctccatgccggactccg 253 ||||||||||||||||||||| Sbjct: 16669 acctctccatgccggactccg 16649
>dbj|AK106844.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-H12, full insert sequence Length = 1969 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 233 acctctccatgccggactccg 253 ||||||||||||||||||||| Sbjct: 1115 acctctccatgccggactccg 1095
>gb|AC140001.8| Mus musculus chromosome 5, clone RP24-276E6, complete sequence Length = 130466 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 ggagagaaaggaaggaaagggagcc 32 |||||||||||||||||||| |||| Sbjct: 12057 ggagagaaaggaaggaaaggaagcc 12081
>emb|AL928537.12| Mouse DNA sequence from clone RP23-236E7 on chromosome 2, complete sequence Length = 190808 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 584 aaagaagagaaaagctgttga 604 ||||||||||||||||||||| Sbjct: 179897 aaagaagagaaaagctgttga 179877
>gb|AC119900.7| Mus musculus chromosome 8, clone RP24-235K6, complete sequence Length = 174540 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 476 cctccgctggtgcttcttcat 496 ||||||||||||||||||||| Sbjct: 102852 cctccgctggtgcttcttcat 102872
>gb|AC157575.1| Mus musculus BAC clone RP23-16D16 from 9, complete sequence Length = 196682 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 gagagaggagagaaaggaaggaaag 26 ||||||||| ||||||||||||||| Sbjct: 168911 gagagaggaaagaaaggaaggaaag 168935
>emb|CT025726.15| Mouse DNA sequence from clone RP23-299H17 on chromosome 17, complete sequence Length = 127014 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 gagagaggagagaaaggaagg 22 ||||||||||||||||||||| Sbjct: 15273 gagagaggagagaaaggaagg 15293
>gb|AC170746.3| Loxodonta africana clone VMRC15-355K9, complete sequence Length = 122744 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 12 agaaaggaaggaaagggagcc 32 ||||||||||||||||||||| Sbjct: 54219 agaaaggaaggaaagggagcc 54239
>emb|AL607070.19| Mouse DNA sequence from clone RP23-31C9 on chromosome 4, complete sequence Length = 215106 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ggagagaggagagaaaggaag 21 ||||||||||||||||||||| Sbjct: 64094 ggagagaggagagaaaggaag 64114
>emb|AL592169.14| Mouse DNA sequence from clone RP23-305P10 on chromosome 15, complete sequence Length = 161985 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 gagaggagagaaaggaaggaaaggg 28 ||||||||||| ||||||||||||| Sbjct: 113179 gagaggagagagaggaaggaaaggg 113203
>gb|AY165952.1| Cavia porcellus alpha 1(I) collagen COL1A1 gene, promoter and partial cds Length = 1631 Score = 42.1 bits (21), Expect = 5.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 6 gaggagagaaaggaaggaaagggag 30 |||||| |||||||||||||||||| Sbjct: 1340 gaggagggaaaggaaggaaagggag 1316
>dbj|AB017438.1| Streptomyces coelicolor orf1, orf2, orf3, orf4, orf5 genes, complete cds Length = 6530 Score = 42.1 bits (21), Expect = 5.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 ggccgcgctcggcgccggggt 197 ||||||||||||||||||||| Sbjct: 2623 ggccgcgctcggcgccggggt 2643 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 229,525,470 Number of extensions: 12253290 Number of successful extensions: 266951 Number of sequences better than 10.0: 111 Number of HSP's gapped: 266941 Number of HSP's successfully gapped: 144 Length of query: 1372 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1349 Effective length of database: 18,503,978,556 Effective search space: 24961867072044 Effective search space used: 24961867072044 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
