ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf55k22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK120454:Os08g0130100 171 8e-43
2AK111569:Os03g0639600 115 3e-26
3AK111837:Os12g0611000 109 2e-24
4AY525368:Os08g0159500 81 8e-16
5AK111759:Os08g0159500 81 8e-16
6AJ620676:Os08g0159500 81 8e-16
7AK065375:Os01g0612700 60 3e-09
8AJ620677:Os01g0612700 60 3e-09
9AK061509:Os07g0472200 44 1e-04
10AK059153:Os08g0159500 44 1e-04
11Os10g0565100:Os10g0565100 42 6e-04
12Os03g0389400:Os03g0389400 37 0.014
13AK110400:Os04g0132400 33 0.26
14AK122096:Os02g0450000 31 1.3
15Os03g0388900:Os03g0388900 30 1.7
16Os07g0693400:Os07g0693400 30 2.2
17AK105927: 30 2.2
18AK106919:Os01g0819700 30 2.2
19Os09g0450600:Os09g0450600 29 3.8
20AK067838:Os01g0857600 29 4.9
21AK062645:Os11g0146000 29 4.9
22AK110428: 28 6.4
23AK099723:Os02g0478700 28 8.4
24AK068012:Os04g0346100 28 8.4

>AK120454:Os08g0130100 |
          Length = 147
 Score =  171 bits (432), Expect = 8e-43
 Identities = 86/132 (65%), Positives = 100/132 (75%), Gaps = 1/132 (0%)
 Frame = +1

Query: 160 PRC-TSSVNHQTETATMSELICNGCFSLVLYNRGAANVRCSRCNMLNSTRSASQYAHLKC 336
           P C T +  + +  A MSELIC+GC +L+ YNRGA+N+RC  CN LNSTRSA+Q AHL C
Sbjct: 26  PGCNTLTAVNPSAVADMSELICSGCPTLLFYNRGASNIRCPSCNRLNSTRSANQIAHLTC 85

Query: 337 GGCRTTLMYPPGASTVGCATCHHVNPVRAQGSSAPPDAHARPQTVLVENPRTMNDKGKLV 516
           G CRTTLM+PPGASTV CATC +VN VR           ARPQTVLVENP+T++DKGKLV
Sbjct: 86  GQCRTTLMHPPGASTVQCATCRYVNHVR----------DARPQTVLVENPKTLDDKGKLV 135

Query: 517 SNVAVGVTSWKR 552
           SNV VGVTSWKR
Sbjct: 136 SNVVVGVTSWKR 147



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>AK111569:Os03g0639600 |
          Length = 186

 Score =  115 bits (289), Expect = 3e-26
 Identities = 64/144 (44%), Positives = 81/144 (56%), Gaps = 29/144 (20%)
 Frame = +1

Query: 205 MSELICNGCFSLVLYNRGAANVRCSRCNMLNSTRSASQYAHLKCGGCRTTLMYPPGASTV 384
           M+ LIC GC +L++Y R A  VRCS C+ +N  R  +  AH+ CG CRTTLMYP GA +V
Sbjct: 43  MAHLICGGCRTLLMYTRNADTVRCSCCSTVNLVRPVNNIAHVSCGQCRTTLMYPYGAPSV 102

Query: 385 GCATCHHVN------------------------PVRAQGSSAPPDAHA---RPQ--TVLV 477
            CA CH++                         P      +APP   A   RPQ  TV+V
Sbjct: 103 KCAICHYITNTGMNTVAPTPSPMPTSSGSSYNAPPSGSSYNAPPPTSAPTSRPQNVTVVV 162

Query: 478 ENPRTMNDKGKLVSNVAVGVTSWK 549
           ENP T+++KGKLVSNV VGVT+ K
Sbjct: 163 ENPMTVDEKGKLVSNVVVGVTTGK 186



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>AK111837:Os12g0611000 |
          Length = 172

 Score =  109 bits (273), Expect = 2e-24
 Identities = 62/150 (41%), Positives = 81/150 (54%), Gaps = 20/150 (13%)
 Frame = +1

Query: 154 GMPRCTSSVNHQTETATMS------ELICNGCFSLVLYNRGAANVRCSRCNMLNSTRSAS 315
           G P    +V H   +   S       LIC GC +L++Y R A +VRCS C+ +N  R  S
Sbjct: 19  GAPSVCCAVCHAVSSTAPSPGMDIAHLICGGCRTLLMYTRNATSVRCSCCDTVNLVRPVS 78

Query: 316 QYAHLKCGGCRTTLMYPPGASTVGCATCHHVN----------PVRAQGSSAP----PDAH 453
             AHL CG C+T LMYP GA +V CA C+ +           P      +AP    P   
Sbjct: 79  SIAHLNCGQCQTVLMYPYGAPSVKCAICNFITNTGMNTMRHLPPNGTSYTAPSTSAPTTQ 138

Query: 454 ARPQTVLVENPRTMNDKGKLVSNVAVGVTS 543
           ++  TV+VENP T++ KGKLVSNV VGVT+
Sbjct: 139 SQNVTVVVENPMTVDAKGKLVSNVVVGVTT 168



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>AY525368:Os08g0159500 |
          Length = 143

 Score = 81.3 bits (199), Expect = 8e-16
 Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
 Frame = +1

Query: 205 MSELICNGCFSLVLYNRGAANVRCSRCNMLNSTRSASQYAHLKCGGCRTTLMYPPGASTV 384
           M++L+C GC +L++Y RGA +V+CS C+ +N    A+Q AH+ CG CR  LMY  GA +V
Sbjct: 61  MAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSV 120

Query: 385 GCATCHHVNPVRAQ-GSSAPPDA 450
            CA C+ V  V A  G+   P +
Sbjct: 121 KCAVCNFVTSVGASPGTDQKPSS 143



 Score = 69.3 bits (168), Expect = 3e-12
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = +1

Query: 160 PRCTSSVNHQTETATMSELICNGCFSLVLYNRGAANVRCSRCNMLNSTRS-ASQYAHLKC 336
           P  T  V         S+L+C+GC +L++Y  GA +V C+ C+ + +  +  ++ A L C
Sbjct: 7   PYPTPPVPFTPPNGAQSQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMAQLVC 66

Query: 337 GGCRTTLMYPPGASTVGCATCHHVN 411
           GGC T LMY  GA++V C+ CH VN
Sbjct: 67  GGCHTLLMYIRGATSVQCSCCHTVN 91



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 19/37 (51%), Positives = 23/37 (62%)
 Frame = +1

Query: 322 AHLKCGGCRTTLMYPPGASTVGCATCHHVNPVRAQGS 432
           + L C GCR  LMYP GA++V CA C  V  V A G+
Sbjct: 23  SQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGT 59



 Score = 37.0 bits (84), Expect = 0.018
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 166 CTSSVNHQTETATMSELICNGCFSLVLYNRGAANVRCSRCNMLNS 300
           C  +VN   E   ++ + C  C  L++Y  GA +V+C+ CN + S
Sbjct: 86  CCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTS 130



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>AK111759:Os08g0159500 |
          Length = 184

 Score = 81.3 bits (199), Expect = 8e-16
 Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
 Frame = +1

Query: 205 MSELICNGCFSLVLYNRGAANVRCSRCNMLNSTRSASQYAHLKCGGCRTTLMYPPGASTV 384
           M++L+C GC +L++Y RGA +V+CS C+ +N    A+Q AH+ CG CR  LMY  GA +V
Sbjct: 102 MAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSV 161

Query: 385 GCATCHHVNPVRAQ-GSSAPPDA 450
            CA C+ V  V A  G+   P +
Sbjct: 162 KCAVCNFVTSVGASPGTDQKPSS 184



 Score = 69.3 bits (168), Expect = 3e-12
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = +1

Query: 160 PRCTSSVNHQTETATMSELICNGCFSLVLYNRGAANVRCSRCNMLNSTRS-ASQYAHLKC 336
           P  T  V         S+L+C+GC +L++Y  GA +V C+ C+ + +  +  ++ A L C
Sbjct: 48  PYPTPPVPFTPPNGAQSQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMAQLVC 107

Query: 337 GGCRTTLMYPPGASTVGCATCHHVN 411
           GGC T LMY  GA++V C+ CH VN
Sbjct: 108 GGCHTLLMYIRGATSVQCSCCHTVN 132



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 19/37 (51%), Positives = 23/37 (62%)
 Frame = +1

Query: 322 AHLKCGGCRTTLMYPPGASTVGCATCHHVNPVRAQGS 432
           + L C GCR  LMYP GA++V CA C  V  V A G+
Sbjct: 64  SQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGT 100



 Score = 37.0 bits (84), Expect = 0.018
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 166 CTSSVNHQTETATMSELICNGCFSLVLYNRGAANVRCSRCNMLNS 300
           C  +VN   E   ++ + C  C  L++Y  GA +V+C+ CN + S
Sbjct: 127 CCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTS 171



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>AJ620676:Os08g0159500 |
          Length = 143

 Score = 81.3 bits (199), Expect = 8e-16
 Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
 Frame = +1

Query: 205 MSELICNGCFSLVLYNRGAANVRCSRCNMLNSTRSASQYAHLKCGGCRTTLMYPPGASTV 384
           M++L+C GC +L++Y RGA +V+CS C+ +N    A+Q AH+ CG CR  LMY  GA +V
Sbjct: 61  MAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSV 120

Query: 385 GCATCHHVNPVRAQ-GSSAPPDA 450
            CA C+ V  V A  G+   P +
Sbjct: 121 KCAVCNFVTSVGASPGTDQKPSS 143



 Score = 69.3 bits (168), Expect = 3e-12
 Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = +1

Query: 160 PRCTSSVNHQTETATMSELICNGCFSLVLYNRGAANVRCSRCNMLNSTRS-ASQYAHLKC 336
           P  T  V         S+L+C+GC +L++Y  GA +V C+ C+ + +  +  ++ A L C
Sbjct: 7   PYPTPPVPFTPPNGAQSQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMAQLVC 66

Query: 337 GGCRTTLMYPPGASTVGCATCHHVN 411
           GGC T LMY  GA++V C+ CH VN
Sbjct: 67  GGCHTLLMYIRGATSVQCSCCHTVN 91



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 19/37 (51%), Positives = 23/37 (62%)
 Frame = +1

Query: 322 AHLKCGGCRTTLMYPPGASTVGCATCHHVNPVRAQGS 432
           + L C GCR  LMYP GA++V CA C  V  V A G+
Sbjct: 23  SQLVCSGCRNLLMYPAGATSVCCAVCSTVTAVPAPGT 59



 Score = 37.0 bits (84), Expect = 0.018
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 166 CTSSVNHQTETATMSELICNGCFSLVLYNRGAANVRCSRCNMLNS 300
           C  +VN   E   ++ + C  C  L++Y  GA +V+C+ CN + S
Sbjct: 86  CCHTVNLAMEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTS 130



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>AK065375:Os01g0612700 |
          Length = 855

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 26/71 (36%), Positives = 37/71 (52%)
 Frame = +1

Query: 205 MSELICNGCFSLVLYNRGAANVRCSRCNMLNSTRSASQYAHLKCGGCRTTLMYPPGASTV 384
           + +++C  C  L+ Y RGA  V C+ C  +N    A +   + CG C T LMYP GA  V
Sbjct: 760 VGQMVCGSCRILLAYFRGAGYVHCTCCQTMNYVLEAHEVGKVHCGHCATLLMYPFGAPAV 819

Query: 385 GCATCHHVNPV 417
            C+ C  V  +
Sbjct: 820 KCSLCLFVTEI 830



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 316 QYAHLKCGGCRTTLMYPPGASTVGCATCHHVNPV 417
           +   + CG CR  L Y  GA  V C  C  +N V
Sbjct: 759 EVGQMVCGSCRILLAYFRGAGYVHCTCCQTMNYV 792



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>AJ620677:Os01g0612700 |
          Length = 163

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 26/71 (36%), Positives = 37/71 (52%)
 Frame = +1

Query: 205 MSELICNGCFSLVLYNRGAANVRCSRCNMLNSTRSASQYAHLKCGGCRTTLMYPPGASTV 384
           + +++C  C  L+ Y RGA  V C+ C  +N    A +   + CG C T LMYP GA  V
Sbjct: 68  VGQMVCGSCRILLAYFRGAGYVHCTCCQTMNYVLEAHEVGKVHCGHCATLLMYPFGAPAV 127

Query: 385 GCATCHHVNPV 417
            C+ C  V  +
Sbjct: 128 KCSLCLFVTEI 138



 Score = 29.6 bits (65), Expect = 2.9
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +1

Query: 316 QYAHLKCGGCRTTLMYPPGASTVGCATCHHVNPV 417
           +   + CG CR  L Y  GA  V C  C  +N V
Sbjct: 67  EVGQMVCGSCRILLAYFRGAGYVHCTCCQTMNYV 100



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>AK061509:Os07g0472200 |
          Length = 147

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 21/56 (37%), Positives = 29/56 (51%)
 Frame = +1

Query: 286 NMLNSTRSASQYAHLKCGGCRTTLMYPPGASTVGCATCHHVNPVRAQGSSAPPDAH 453
           +M  S+ S    + L C GCR  LMYP GA+++ CA C  V  V A    +  + H
Sbjct: 34  SMPPSSHSLGAQSQLVCSGCRNLLMYPAGATSICCAVCGTVTAVPAPEQKSSCNVH 89



 Score = 34.7 bits (78), Expect = 0.090
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = +1

Query: 208 SELICNGCFSLVLYNRGAANVRCSRCNMLNSTRSASQ 318
           S+L+C+GC +L++Y  GA ++ C+ C  + +  +  Q
Sbjct: 46  SQLVCSGCRNLLMYPAGATSICCAVCGTVTAVPAPEQ 82



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>AK059153:Os08g0159500 |
          Length = 93

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 18/35 (51%), Positives = 24/35 (68%)
 Frame = +1

Query: 307 SASQYAHLKCGGCRTTLMYPPGASTVGCATCHHVN 411
           + ++ A L CGGC T LMY  GA++V C+ CH VN
Sbjct: 19  AGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVN 53



 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 15/31 (48%), Positives = 25/31 (80%)
 Frame = +1

Query: 205 MSELICNGCFSLVLYNRGAANVRCSRCNMLN 297
           M++L+C GC +L++Y RGA +V+CS C+ +N
Sbjct: 23  MAQLVCGGCHTLLMYIRGATSVQCSCCHTVN 53



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>Os10g0565100:Os10g0565100 |
          Length = 425

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 21/45 (46%), Positives = 24/45 (53%)
 Frame = +1

Query: 328 LKCGGCRTTLMYPPGASTVGCATCHHVNPVRAQGSSAPPDAHARP 462
           + C GCRT L  P GA  + CA C  V  V A   +APP AH  P
Sbjct: 67  IDCSGCRTPLQLPHGAPCIRCAICGAVTYVAA---AAPPPAHGDP 108



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>Os03g0389400:Os03g0389400 |
          Length = 369

 Score = 37.4 bits (85), Expect = 0.014
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +1

Query: 334 CGGCRTTLMYPPGASTVGCATCHHVNPVRAQG 429
           CGGC   L  PPGA +V CA C  V  V  +G
Sbjct: 13  CGGCGAYLAVPPGARSVRCALCRAVTRVERRG 44



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>AK110400:Os04g0132400 |
          Length = 350

 Score = 33.1 bits (74), Expect = 0.26
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +1

Query: 412 PVRAQGSS--APPDAHARPQTVLVENPRTMNDKGKLVSNVAVGVTSW 546
           P R+  SS  +P DA + P+  L ++ R+++D  +L S+  +G  SW
Sbjct: 49  PARSDSSSRSSPSDAGSSPERRLSKSRRSLSDAARLPSDAGIGPESW 95



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>AK122096:Os02g0450000 |
          Length = 810

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
 Frame = +1

Query: 259 AANVRCSRCNMLNSTRSASQYA--HLKCGGCRTTLMYPPGASTVGCATCHHVNPVRAQGS 432
           A  +RC  C+ + S  + S+ A  HLK G C      PPGA+              A GS
Sbjct: 70  AVKLRCGLCSAVFSASNPSRTASEHLKRGTCPNFSAPPPGAAA-------------ASGS 116

Query: 433 SAPPDAHARPQTVLVENP 486
           S        PQ  L   P
Sbjct: 117 SGSQHQQQTPQAALQALP 134



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>Os03g0388900:Os03g0388900 |
          Length = 376

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 328 LKCGGCRTTLMYPPGASTVGCATCHHVNPVRAQGSSAPPD 447
           ++C  C  +L   PGA  + CA C+ V  V  +G    P+
Sbjct: 20  VRCRHCSASLPAMPGARVIQCAQCYGVTRVGGRGRRRHPN 59



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>Os07g0693400:Os07g0693400 |
          Length = 957

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = -1

Query: 684 VYIKLKNTLDFNIYLTTKTMIQIHQGHASL-IRPLGIKPRIPSWSSFP*GDTNRHIAHQF 508
           VY +L N L FN +      I+I  GH ++ I    I   +  W S   GDT + + H  
Sbjct: 436 VYYELSNYLSFNEWFHGSLSIEISNGHPNMRIIRRKIALLLGQWISEIKGDTRKLVYH-- 493

Query: 507 ALVVHCPGILHEN 469
           ALV    G+L +N
Sbjct: 494 ALV----GLLQDN 502



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>AK105927: |
          Length = 463

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +1

Query: 256 GAANVRCSRCNMLNSTRSASQYAHLKCGGCRTTLMYPPGASTVGCATCHHVNPVRAQGSS 435
           G A    SR      TRSA++ +      C  +    P ++T GC+T     P R+  S+
Sbjct: 372 GEAAAATSRAPPTAPTRSATRPSSRSSSTCPRSSPSSPSSATTGCSTSTTPTPTRS--SA 429

Query: 436 APP 444
           +PP
Sbjct: 430 SPP 432



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>AK106919:Os01g0819700 |
          Length = 467

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +1

Query: 271 RCSRCNMLNSTRSASQYAHLKCGGCRTTLMYPPGASTVGCAT 396
           +CS    L +  SA++ A L+CGGC  TL     A+    A+
Sbjct: 353 KCSEILQLPAAVSANRAARLECGGCGETLSIKLPAAAAAAAS 394



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>Os09g0450600:Os09g0450600 |
          Length = 481

 Score = 29.3 bits (64), Expect = 3.8
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = +3

Query: 393 HVPSRQPRQSPGLLGSSGCPCPASDSSRGESQDNERQGQTGEQCGGW 533
           H+PSR+PR+ P    SS  P  A  +S       E   + G  C GW
Sbjct: 171 HLPSRRPRRPPS--SSSLLPATALVASLASWCSVEPNTKQGNCCNGW 215



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>AK067838:Os01g0857600 |
          Length = 576

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 384 GVRHVPSRQPRQSPGLLGSSGCPCPASDSSRGESQDNERQGQTGEQCGGWCH 539
           GV++ PS    +S GLL +   P    D+S  E+  ++R     E+  G CH
Sbjct: 175 GVKNHPSASNNRSAGLLLNGSLPESPQDTSGQEAAADQRDSH--EELHGHCH 224



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>AK062645:Os11g0146000 |
          Length = 146

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = +3

Query: 402 SRQPRQSPGLLGSSGCPCPASDSSRGESQ----DNERQGQTGE 518
           SR PR  PG  G       A  SSRG S+    D+ + G+ GE
Sbjct: 23  SRTPRPQPGSAGERSAAASAEMSSRGGSKSCGGDSLQPGEAGE 65



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>AK110428: |
          Length = 1060

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 268 VRCSRCNMLNSTRSASQYAHLKCGGCRTTLMYPPGASTVGCATCHHVNPV 417
           V+C++C+ +   R  S    + C GCR TL          CA+C    P+
Sbjct: 387 VKCAQCSDVILERCESCSVRMHCMGCRKTL----------CASCAFNRPI 426



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>AK099723:Os02g0478700 |
          Length = 86

 Score = 28.1 bits (61), Expect = 8.4
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 265 NVRCSRCNMLNSTRSASQYAHLKCGGCRTTLMYPPGAS---TVGCA 393
           +V+C  C  + +  S SQ   + C GC+T L  P G     T GC+
Sbjct: 36  DVKCQGCFNITTVFSHSQTV-VVCPGCQTVLCQPTGGKARLTEGCS 80



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>AK068012:Os04g0346100 |
          Length = 86

 Score = 28.1 bits (61), Expect = 8.4
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
 Frame = +1

Query: 265 NVRCSRCNMLNSTRSASQYAHLKCGGCRTTLMYPPGAS---TVGCA 393
           +V+C  C  + +  S SQ   + C GC+T L  P G     T GC+
Sbjct: 36  DVKCQGCFNITTVFSHSQTV-VVCPGCQTVLCQPTGGKARLTEGCS 80


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 21,592,330
Number of extensions: 474109
Number of successful extensions: 1577
Number of sequences better than 10.0: 24
Number of HSP's gapped: 1560
Number of HSP's successfully gapped: 39
Length of query: 292
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 192
Effective length of database: 11,395,755
Effective search space: 2187984960
Effective search space used: 2187984960
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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