ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf55i16 |
|---|---|
| Clone Library Name | barley_pub |
>Q21828:YNFD_CAEEL UPF0041 protein R07E5.13 - Caenorhabditis elegans| Length = 160 Score = 103 bits (257), Expect = 7e-22 Identities = 52/95 (54%), Positives = 63/95 (66%) Frame = +3 Query: 192 TTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTAAMCVYSGLFMRFAWMVQPRNYLLLAC 371 +THFWGPVANWG LA L DL K P+MISG MT+A+ +YS +FMRFAW VQPRN LL AC Sbjct: 26 STHFWGPVANWGLPLAALGDLKKNPDMISGPMTSALLIYSSVFMRFAWHVQPRNLLLFAC 85 Query: 372 HASNETVQLYHLSRCARAQGYLDSKKEPEAKK*MV 476 H +N + Q L R YL ++P K M+ Sbjct: 86 HFANFSAQGAQLGRFVN-HNYLHYVEDPVHHKLMM 119
>Q9Y5U8:BR44L_HUMAN Brain protein 44-like protein - Homo sapiens (Human)| Length = 109 Score = 102 bits (255), Expect = 1e-21 Identities = 45/69 (65%), Positives = 54/69 (78%) Frame = +3 Query: 192 TTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTAAMCVYSGLFMRFAWMVQPRNYLLLAC 371 +THFWGPVANWG +A + D+ K PE+ISG MT A+C YS FMRFA+ VQPRN+LL AC Sbjct: 24 STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83 Query: 372 HASNETVQL 398 HA+NE QL Sbjct: 84 HATNEVAQL 92
>P63031:BR44L_RAT Brain protein 44-like protein - Rattus norvegicus (Rat)| Length = 109 Score = 101 bits (251), Expect = 3e-21 Identities = 44/69 (63%), Positives = 53/69 (76%) Frame = +3 Query: 192 TTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTAAMCVYSGLFMRFAWMVQPRNYLLLAC 371 +THFWGPVANWG +A + D+ K PE+ISG MT A+C YS FMRFA+ VQPRN+LL AC Sbjct: 24 STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83 Query: 372 HASNETVQL 398 H +NE QL Sbjct: 84 HVTNEVAQL 92
>P63030:BR44L_MOUSE Brain protein 44-like protein - Mus musculus (Mouse)| Length = 109 Score = 101 bits (251), Expect = 3e-21 Identities = 44/69 (63%), Positives = 53/69 (76%) Frame = +3 Query: 192 TTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTAAMCVYSGLFMRFAWMVQPRNYLLLAC 371 +THFWGPVANWG +A + D+ K PE+ISG MT A+C YS FMRFA+ VQPRN+LL AC Sbjct: 24 STHFWGPVANWGLPIAAINDMKKSPEIISGRMTFALCCYSLTFMRFAYKVQPRNWLLFAC 83 Query: 372 HASNETVQL 398 H +NE QL Sbjct: 84 HVTNEVAQL 92
>P53157:YGI0_YEAST UPF0041 protein YGL080W - Saccharomyces cerevisiae (Baker's yeast)| Length = 130 Score = 92.8 bits (229), Expect = 1e-18 Identities = 44/81 (54%), Positives = 54/81 (66%) Frame = +3 Query: 192 TTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTAAMCVYSGLFMRFAWMVQPRNYLLLAC 371 TTHFWGPV+N+G +A + DL K P +ISG MT A+ YSG+FM++A V P+NYLL C Sbjct: 28 TTHFWGPVSNFGIPIAAIYDLKKDPTLISGPMTFALVTYSGVFMKYALSVSPKNYLLFGC 87 Query: 372 HASNETVQLYHLSRCARAQGY 434 H NET QL AQGY Sbjct: 88 HLINETAQL--------AQGY 100
>P53311:YG56_YEAST UPF0041 protein YGR243W - Saccharomyces cerevisiae (Baker's yeast)| Length = 146 Score = 79.0 bits (193), Expect = 2e-14 Identities = 35/89 (39%), Positives = 54/89 (60%) Frame = +3 Query: 153 AFKAFVNSPVGPKTTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTAAMCVYSGLFMRFA 332 AF+ F NS GPKT HFW P WG V AGL D+ +P E +SG ++ + ++ R++ Sbjct: 9 AFRRFWNSETGPKTVHFWAPTLKWGLVFAGLNDIKRPVEKVSGAQNLSLLATALIWTRWS 68 Query: 333 WMVQPRNYLLLACHASNETVQLYHLSRCA 419 ++++P+NYLL + + YHL+R A Sbjct: 69 FVIKPKNYLLASVNFFLGCTAGYHLTRIA 97
>P38857:YHW2_YEAST UPF0041 protein YHR162W - Saccharomyces cerevisiae (Baker's yeast)| Length = 129 Score = 72.4 bits (176), Expect = 2e-12 Identities = 35/96 (36%), Positives = 53/96 (55%) Frame = +3 Query: 132 STRGMATAFKAFVNSPVGPKTTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTAAMCVYS 311 ST + AF+ F S GPKT HFW P WG V AG D+ +P E ISG ++ + Sbjct: 2 STSSVRFAFRRFWQSETGPKTVHFWAPTLKWGLVFAGFSDMKRPVEKISGAQNLSLLSTA 61 Query: 312 GLFMRFAWMVQPRNYLLLACHASNETVQLYHLSRCA 419 ++ R++++++PRN LL + ++ Y L R A Sbjct: 62 LIWTRWSFVIKPRNILLASVNSFLCLTAGYQLGRIA 97
>Q09896:YAI9_SCHPO UPF0041 protein C24B11.09 - Schizosaccharomyces pombe (Fission| yeast) Length = 118 Score = 69.7 bits (169), Expect = 1e-11 Identities = 29/67 (43%), Positives = 41/67 (61%) Frame = +3 Query: 156 FKAFVNSPVGPKTTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTAAMCVYSGLFMRFAW 335 FK F N P GPKT HFW P W VL+G+ D + PE +S AA+C ++ R++ Sbjct: 6 FKRFWNHPAGPKTVHFWAPAMKWTLVLSGIGDYARSPEYLSIRQYAALCATGAIWTRWSL 65 Query: 336 MVQPRNY 356 +V+P+NY Sbjct: 66 IVRPKNY 72
>O95563:BR44_HUMAN Brain protein 44 - Homo sapiens (Human)| Length = 127 Score = 61.6 bits (148), Expect = 3e-09 Identities = 26/85 (30%), Positives = 44/85 (51%) Frame = +3 Query: 114 HAAVDTSTRGMATAFKAFVNSPVGPKTTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTA 293 H +D + + N P GP+T FW P+ WG V AGL D+ +P E +S +A Sbjct: 14 HRLLDKVELMLPEKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQSA 73 Query: 294 AMCVYSGLFMRFAWMVQPRNYLLLA 368 + ++ R++ ++ P+N+ L A Sbjct: 74 VLMATGFIWSRYSLVIIPKNWSLFA 98
>Q9D023:BR44_MOUSE Brain protein 44 - Mus musculus (Mouse)| Length = 127 Score = 60.1 bits (144), Expect = 9e-09 Identities = 31/111 (27%), Positives = 51/111 (45%) Frame = +3 Query: 114 HAAVDTSTRGMATAFKAFVNSPVGPKTTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTA 293 H +D + + N P GP+T FW P+ WG V AGL D+ +P E +S + Sbjct: 14 HRLMDKVELLLPKKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQST 73 Query: 294 AMCVYSGLFMRFAWMVQPRNYLLLACHASNETVQLYHLSRCARAQGYLDSK 446 + ++ R++ ++ P+N+ L A + + L R R L SK Sbjct: 74 VLMATGFIWSRYSLVIIPKNWSLFAVNFFVGSAGASQLFRIWRYNQELKSK 124
>P38718:BR44_RAT Brain protein 44 - Rattus norvegicus (Rat)| Length = 127 Score = 59.7 bits (143), Expect = 1e-08 Identities = 25/85 (29%), Positives = 43/85 (50%) Frame = +3 Query: 114 HAAVDTSTRGMATAFKAFVNSPVGPKTTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTA 293 H +D + + N P GP+T FW P+ WG V AGL D+ +P E +S + Sbjct: 14 HRLMDKVELLLPKKLRPLYNHPAGPRTVFFWAPIMKWGLVCAGLADMARPAEKLSTAQST 73 Query: 294 AMCVYSGLFMRFAWMVQPRNYLLLA 368 + ++ R++ ++ P+N+ L A Sbjct: 74 VLMATGFIWSRYSLVIIPKNWSLFA 98
>Q5R4Z3:BR44_PONPY Brain protein 44 - Pongo pygmaeus (Orangutan)| Length = 127 Score = 56.2 bits (134), Expect = 1e-07 Identities = 25/85 (29%), Positives = 43/85 (50%) Frame = +3 Query: 114 HAAVDTSTRGMATAFKAFVNSPVGPKTTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTA 293 H +D + + N P GP+T FW P+ G V AGL D+ +P E +S +A Sbjct: 14 HRLLDKVELMLPEKLRPLYNHPAGPRTVFFWAPIMKRGLVCAGLADMARPAEKLSTAQSA 73 Query: 294 AMCVYSGLFMRFAWMVQPRNYLLLA 368 + ++ R++ ++ P+N+ L A Sbjct: 74 VLMATGFIWSRYSLVIIPKNWSLFA 98
>O01578:YXX3_CAEEL UPF0041 protein F53F10.3 - Caenorhabditis elegans| Length = 133 Score = 52.0 bits (123), Expect = 2e-06 Identities = 30/101 (29%), Positives = 46/101 (45%) Frame = +3 Query: 171 NSPVGPKTTHFWGPVANWGFVLAGLVDLNKPPEMISGNMTAAMCVYSGLFMRFAWMVQPR 350 N GPKT FW P W + AGL DL +P + +S +A+ ++ R+ ++ P Sbjct: 32 NHAAGPKTVFFWAPTIKWTLIGAGLADLARPADKLSLYQNSALFATGAIWTRYCLVITPI 91 Query: 351 NYLLLACHASNETVQLYHLSRCARAQGYLDSKKEPEAKK*M 473 NY L + N V L++ R Y + E K+ M Sbjct: 92 NYYL---SSVNFFVMCTGLAQLCRIAHYRYQNPDWETKEIM 129
>Q06068:HSP97_STRPU 97 kDa heat shock protein - Strongylocentrotus purpuratus (Purple| sea urchin) Length = 889 Score = 31.2 bits (69), Expect = 4.2 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Frame = -2 Query: 311 RIDTHGCCHIARYHL--RRLVQVNQTREDEAPVSDGPPEVGGLGADGTVHERLERRRHAS 138 R+D HG ++A L + VQ ED +P +GP + G GA ++ + Sbjct: 481 RVDGHGIFNVASASLIEKLPVQAEDAMEDGSPEENGPSKEEGSGASQAENDAPMDQSPVQ 540 Query: 137 GGCIDGGVS 111 GG +G S Sbjct: 541 GGAGEGEAS 549
>P12915:POLG_BOVEV Genome polyprotein [Contains: Capsid protein VP4 - Bovine enterovirus| (strain VG-5-27) (BEV) Length = 2175 Score = 30.4 bits (67), Expect = 7.2 Identities = 15/53 (28%), Positives = 27/53 (50%) Frame = -2 Query: 314 SRIDTHGCCHIARYHLRRLVQVNQTREDEAPVSDGPPEVGGLGADGTVHERLE 156 +R+D HGC IAR + R + ++ P+ PP + + A+ ER++ Sbjct: 883 TRVDAHGCDTIARCNCRSGIYYCKSTAKHYPIVVTPPSIYKIEANDYYPERMQ 935
>O34654:YODI_BACSU Uncharacterized protein yodI - Bacillus subtilis| Length = 83 Score = 30.0 bits (66), Expect = 9.4 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = -2 Query: 341 YHPCKPH--KESRIDTHGCCHIARYHLRRLVQVNQTREDEAPVSDGPPEVG 195 YH CK H K RI G R H+ R+ +V + R APV GP G Sbjct: 5 YHLCKNHQGKVVRITERG----GRVHVGRITRVTRDRVFIAPVGGGPRGFG 51
>P15589:STS_RAT Steryl-sulfatase precursor - Rattus norvegicus (Rat)| Length = 577 Score = 30.0 bits (66), Expect = 9.4 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +3 Query: 234 LAGLVDLNKPPEMISGNMTAAMCVYSGLFMRFAWMVQPRNYLLLA 368 LA L +PP + G AAM G ++ F + +P N L+A Sbjct: 201 LARWAGLARPPGWVFGVTVAAMAAVGGAYVAFLYHFRPANCFLMA 245
>Q6EUW1:FOXO3_XENLA Forkhead box protein O3 - Xenopus laevis (African clawed frog)| Length = 657 Score = 30.0 bits (66), Expect = 9.5 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = -1 Query: 543 TNFTY*KAGCGIMAPGSDFRNTTPFTFWPPALSSNP 436 ++FTY G GI +P ++F NT F F +L +P Sbjct: 397 SSFTYGTKGSGIGSPSNNFNNTGSFNFPLTSLRQSP 432 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 134,071,463 Number of extensions: 3007385 Number of successful extensions: 7650 Number of sequences better than 10.0: 18 Number of HSP's gapped: 7649 Number of HSP's successfully gapped: 18 Length of query: 243 Length of database: 100,686,439 Length adjustment: 110 Effective length of query: 133 Effective length of database: 70,513,989 Effective search space: 9378360537 Effective search space used: 9378360537 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
