| Clone Name | FLbaf59e13 |
|---|---|
| Clone Library Name | barley_pub |
>Q9WVQ1:MAGI2_MOUSE Membrane-associated guanylate kinase, WW and PDZ domain-containing| protein 2 - Mus musculus (Mouse) Length = 1275 Score = 33.9 bits (76), Expect = 2.1 Identities = 22/58 (37%), Positives = 25/58 (43%) Frame = +3 Query: 348 RSPPSTAASESVSERDYRIYSNLAGAYVSDSARPSAGCISHCIGASSTDDFPIETMEN 521 RSP S + S DY YSN A S +A P G SH + T D I EN Sbjct: 873 RSPGSVSTHHSSPRSDYATYSNSNHAAPSSNASPPEGFASHSL---QTSDVVIHRKEN 927
>O13066:RGP1_XENLA Ran GTPase-activating protein 1 - Xenopus laevis (African clawed| frog) Length = 580 Score = 33.1 bits (74), Expect = 3.6 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = +3 Query: 1176 VSALLEPVHYMHDVGVISDDDHEDDAGGISDDDHEDD 1286 V +LE ++ + +G +SDD+ EDD DDD ++D Sbjct: 341 VQEILESINMANILGSLSDDEDEDDDDDDEDDDDDED 377
>Q75UQ2:CFDP1_RAT Craniofacial development protein 1 - Rattus norvegicus (Rat)| Length = 295 Score = 33.1 bits (74), Expect = 3.6 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%) Frame = +3 Query: 1056 YLPGAKDLSIDDLLQDDTNDSLEWHHLVARYRQMNRRAAVVSALLEPVHYMHDVGVISDD 1235 Y+P + S DD+ + D ++ + + R+A + P G++ D+ Sbjct: 18 YVPSGGEYSEDDVNELVKEDEVDGEEQAEKTKGKRRKAQSI-----PARKRKQSGLLLDE 72 Query: 1236 --DHEDDAGGIS-DDDHEDDVGGMSDDDYRE 1319 D E+D+GG S ++D E+ GG+ + R+ Sbjct: 73 EEDGEEDSGGSSREEDEEEQEGGLGSETSRK 103
>Q8CGN5:PLIN_MOUSE Perilipin - Mus musculus (Mouse)| Length = 517 Score = 32.7 bits (73), Expect = 4.7 Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 5/137 (3%) Frame = +3 Query: 924 GRVQKQEADDMYYICVCHVQVLGRSLSPLFMVDISDP--EGHSILKYLPGAKDLSIDDLL 1097 GR + Q+A V V L +LS M + +GHS+ ++PG LS Sbjct: 203 GRQRTQKAPKAKPSLVRRVSTLANTLSRHTMQTTAWALKQGHSLAMWIPGVAPLS----- 257 Query: 1098 QDDTNDSLEWHHLVARYRQMNRRAAVVSALLEPVHYMHDVGVISDDDHEDDA---GGISD 1268 SL A + ++RR + V V ++H++ D+ H+D G +D Sbjct: 258 ------SLAQWGASAAMQVVSRRQSEVR-----VPWLHNLAASQDESHDDQTDTEGEETD 306 Query: 1269 DDHEDDVGGMSDDDYRE 1319 D+ E++ ++ RE Sbjct: 307 DEEEEEESEAEENVLRE 323
>O60240:PLIN_HUMAN Perilipin - Homo sapiens (Human)| Length = 522 Score = 32.7 bits (73), Expect = 4.7 Identities = 20/84 (23%), Positives = 35/84 (41%) Frame = +3 Query: 1035 EGHSILKYLPGAKDLSIDDLLQDDTNDSLEWHHLVARYRQMNRRAAVVSALLEPVHYMHD 1214 +GH++ ++PG LS +W VA RR+ V V ++H Sbjct: 243 QGHTVAMWIPGVVPLS----------SLAQWGASVAMQAVSRRRSEV------RVPWLHS 286 Query: 1215 VGVISDDDHEDDAGGISDDDHEDD 1286 + ++DHED +D E++ Sbjct: 287 LAAAQEEDHEDQTDTEGEDTEEEE 310
>O88382:MAGI2_RAT Membrane-associated guanylate kinase, WW and PDZ domain-containing| protein 2 - Rattus norvegicus (Rat) Length = 1277 Score = 32.7 bits (73), Expect = 4.7 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = +3 Query: 348 RSPPSTAASESVSERDYRIYSNLAGAYVSDSARPSAGCISHCIGASSTDDFPIETMEN 521 RSP S + S DY Y+N A S++A P G SH + T D I EN Sbjct: 874 RSPGSVSTHHSSPRSDYATYANSNHAAPSNNASPPEGFASHSL---QTSDVIIHRKEN 928
>Q86UL8:MAGI2_HUMAN Membrane-associated guanylate kinase, WW and PDZ domain-containing| protein 2 - Homo sapiens (Human) Length = 1455 Score = 32.7 bits (73), Expect = 4.7 Identities = 21/58 (36%), Positives = 25/58 (43%) Frame = +3 Query: 348 RSPPSTAASESVSERDYRIYSNLAGAYVSDSARPSAGCISHCIGASSTDDFPIETMEN 521 RSP S + S DY Y+N A S +A P G SH + T D I EN Sbjct: 874 RSPGSVSTHHSSPRSDYATYTNSNHAAPSSNASPPEGFASHSL---QTSDVVIHRKEN 928
>Q9VXG1:HANG_DROME Zinc finger protein hangover - Drosophila melanogaster (Fruit fly)| Length = 1913 Score = 32.3 bits (72), Expect = 6.2 Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = +3 Query: 1221 VISDDDHEDDAGGI-SDDDHEDDVGGMSDDDYRE 1319 VIS DD EDD G + SDDD EDD +DD E Sbjct: 1721 VISSDDDEDDDGEVESDDDDEDD--DDEEDDVEE 1752
>P04688:TBA1_SCHPO Tubulin alpha-1 chain - Schizosaccharomyces pombe (Fission yeast)| Length = 455 Score = 32.0 bits (71), Expect = 8.1 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 2/106 (1%) Frame = +3 Query: 459 CISHCIGASSTDDFPIETMENTLDEEEIINFRPSYWSSGGADDPEAPESLTYRLNSDICV 638 C+ H IG D FP E E + + + +++S G P S+ L + V Sbjct: 25 CLEHGIGP---DGFPTENSEVHKNNSYLNDGFGTFFSETG-QGKFVPRSIYVDLEPN--V 78 Query: 639 VDEIRVRPYQAFFQDDDPIYSSKTV--RFRMGHYKLPRESESFIID 770 +D++R PY+ F + + + + GHY + +E +++ Sbjct: 79 IDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLE 124
>Q12600:SIS2_CANTR Protein SIS2 - Candida tropicalis (Yeast)| Length = 531 Score = 32.0 bits (71), Expect = 8.1 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = +3 Query: 1212 DVGVISDDDHEDDAGGISDDDHEDDVGGMSDDD 1310 D I DDD +DD DDD +DD DDD Sbjct: 478 DESAIIDDDDDDDDDDDDDDDDDDDDDDDDDDD 510 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 275,651,216 Number of extensions: 5970435 Number of successful extensions: 23564 Number of sequences better than 10.0: 10 Number of HSP's gapped: 22622 Number of HSP's successfully gapped: 10 Length of query: 562 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 444 Effective length of database: 68,319,629 Effective search space: 30333915276 Effective search space used: 30333915276 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)