ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf59e13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9WVQ1:MAGI2_MOUSE Membrane-associated guanylate kinase, WW and ... 34 2.1
2O13066:RGP1_XENLA Ran GTPase-activating protein 1 - Xenopus laev... 33 3.6
3Q75UQ2:CFDP1_RAT Craniofacial development protein 1 - Rattus nor... 33 3.6
4Q8CGN5:PLIN_MOUSE Perilipin - Mus musculus (Mouse) 33 4.7
5O60240:PLIN_HUMAN Perilipin - Homo sapiens (Human) 33 4.7
6O88382:MAGI2_RAT Membrane-associated guanylate kinase, WW and PD... 33 4.7
7Q86UL8:MAGI2_HUMAN Membrane-associated guanylate kinase, WW and ... 33 4.7
8Q9VXG1:HANG_DROME Zinc finger protein hangover - Drosophila mela... 32 6.2
9P04688:TBA1_SCHPO Tubulin alpha-1 chain - Schizosaccharomyces po... 32 8.1
10Q12600:SIS2_CANTR Protein SIS2 - Candida tropicalis (Yeast) 32 8.1

>Q9WVQ1:MAGI2_MOUSE Membrane-associated guanylate kinase, WW and PDZ domain-containing|
            protein 2 - Mus musculus (Mouse)
          Length = 1275
 Score = 33.9 bits (76), Expect = 2.1
 Identities = 22/58 (37%), Positives = 25/58 (43%)
 Frame = +3

Query: 348  RSPPSTAASESVSERDYRIYSNLAGAYVSDSARPSAGCISHCIGASSTDDFPIETMEN 521
            RSP S +   S    DY  YSN   A  S +A P  G  SH +    T D  I   EN
Sbjct: 873  RSPGSVSTHHSSPRSDYATYSNSNHAAPSSNASPPEGFASHSL---QTSDVVIHRKEN 927



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>O13066:RGP1_XENLA Ran GTPase-activating protein 1 - Xenopus laevis (African clawed|
            frog)
          Length = 580

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 1176 VSALLEPVHYMHDVGVISDDDHEDDAGGISDDDHEDD 1286
            V  +LE ++  + +G +SDD+ EDD     DDD ++D
Sbjct: 341  VQEILESINMANILGSLSDDEDEDDDDDDEDDDDDED 377



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>Q75UQ2:CFDP1_RAT Craniofacial development protein 1 - Rattus norvegicus (Rat)|
          Length = 295

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
 Frame = +3

Query: 1056 YLPGAKDLSIDDLLQDDTNDSLEWHHLVARYRQMNRRAAVVSALLEPVHYMHDVGVISDD 1235
            Y+P   + S DD+ +    D ++      + +   R+A  +     P       G++ D+
Sbjct: 18   YVPSGGEYSEDDVNELVKEDEVDGEEQAEKTKGKRRKAQSI-----PARKRKQSGLLLDE 72

Query: 1236 --DHEDDAGGIS-DDDHEDDVGGMSDDDYRE 1319
              D E+D+GG S ++D E+  GG+  +  R+
Sbjct: 73   EEDGEEDSGGSSREEDEEEQEGGLGSETSRK 103



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>Q8CGN5:PLIN_MOUSE Perilipin - Mus musculus (Mouse)|
          Length = 517

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 5/137 (3%)
 Frame = +3

Query: 924  GRVQKQEADDMYYICVCHVQVLGRSLSPLFMVDISDP--EGHSILKYLPGAKDLSIDDLL 1097
            GR + Q+A       V  V  L  +LS   M   +    +GHS+  ++PG   LS     
Sbjct: 203  GRQRTQKAPKAKPSLVRRVSTLANTLSRHTMQTTAWALKQGHSLAMWIPGVAPLS----- 257

Query: 1098 QDDTNDSLEWHHLVARYRQMNRRAAVVSALLEPVHYMHDVGVISDDDHEDDA---GGISD 1268
                  SL      A  + ++RR + V      V ++H++    D+ H+D     G  +D
Sbjct: 258  ------SLAQWGASAAMQVVSRRQSEVR-----VPWLHNLAASQDESHDDQTDTEGEETD 306

Query: 1269 DDHEDDVGGMSDDDYRE 1319
            D+ E++     ++  RE
Sbjct: 307  DEEEEEESEAEENVLRE 323



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>O60240:PLIN_HUMAN Perilipin - Homo sapiens (Human)|
          Length = 522

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 20/84 (23%), Positives = 35/84 (41%)
 Frame = +3

Query: 1035 EGHSILKYLPGAKDLSIDDLLQDDTNDSLEWHHLVARYRQMNRRAAVVSALLEPVHYMHD 1214
            +GH++  ++PG   LS             +W   VA      RR+ V       V ++H 
Sbjct: 243  QGHTVAMWIPGVVPLS----------SLAQWGASVAMQAVSRRRSEV------RVPWLHS 286

Query: 1215 VGVISDDDHEDDAGGISDDDHEDD 1286
            +    ++DHED      +D  E++
Sbjct: 287  LAAAQEEDHEDQTDTEGEDTEEEE 310



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>O88382:MAGI2_RAT Membrane-associated guanylate kinase, WW and PDZ domain-containing|
            protein 2 - Rattus norvegicus (Rat)
          Length = 1277

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 21/58 (36%), Positives = 26/58 (44%)
 Frame = +3

Query: 348  RSPPSTAASESVSERDYRIYSNLAGAYVSDSARPSAGCISHCIGASSTDDFPIETMEN 521
            RSP S +   S    DY  Y+N   A  S++A P  G  SH +    T D  I   EN
Sbjct: 874  RSPGSVSTHHSSPRSDYATYANSNHAAPSNNASPPEGFASHSL---QTSDVIIHRKEN 928



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>Q86UL8:MAGI2_HUMAN Membrane-associated guanylate kinase, WW and PDZ domain-containing|
            protein 2 - Homo sapiens (Human)
          Length = 1455

 Score = 32.7 bits (73), Expect = 4.7
 Identities = 21/58 (36%), Positives = 25/58 (43%)
 Frame = +3

Query: 348  RSPPSTAASESVSERDYRIYSNLAGAYVSDSARPSAGCISHCIGASSTDDFPIETMEN 521
            RSP S +   S    DY  Y+N   A  S +A P  G  SH +    T D  I   EN
Sbjct: 874  RSPGSVSTHHSSPRSDYATYTNSNHAAPSSNASPPEGFASHSL---QTSDVVIHRKEN 928



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>Q9VXG1:HANG_DROME Zinc finger protein hangover - Drosophila melanogaster (Fruit fly)|
          Length = 1913

 Score = 32.3 bits (72), Expect = 6.2
 Identities = 19/34 (55%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 1221 VISDDDHEDDAGGI-SDDDHEDDVGGMSDDDYRE 1319
            VIS DD EDD G + SDDD EDD     +DD  E
Sbjct: 1721 VISSDDDEDDDGEVESDDDDEDD--DDEEDDVEE 1752



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>P04688:TBA1_SCHPO Tubulin alpha-1 chain - Schizosaccharomyces pombe (Fission yeast)|
          Length = 455

 Score = 32.0 bits (71), Expect = 8.1
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
 Frame = +3

Query: 459 CISHCIGASSTDDFPIETMENTLDEEEIINFRPSYWSSGGADDPEAPESLTYRLNSDICV 638
           C+ H IG    D FP E  E   +   + +   +++S  G      P S+   L  +  V
Sbjct: 25  CLEHGIGP---DGFPTENSEVHKNNSYLNDGFGTFFSETG-QGKFVPRSIYVDLEPN--V 78

Query: 639 VDEIRVRPYQAFFQDDDPIYSSKTV--RFRMGHYKLPRESESFIID 770
           +D++R  PY+  F  +  +   +     +  GHY + +E    +++
Sbjct: 79  IDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLE 124



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>Q12600:SIS2_CANTR Protein SIS2 - Candida tropicalis (Yeast)|
          Length = 531

 Score = 32.0 bits (71), Expect = 8.1
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +3

Query: 1212 DVGVISDDDHEDDAGGISDDDHEDDVGGMSDDD 1310
            D   I DDD +DD     DDD +DD     DDD
Sbjct: 478  DESAIIDDDDDDDDDDDDDDDDDDDDDDDDDDD 510


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 275,651,216
Number of extensions: 5970435
Number of successful extensions: 23564
Number of sequences better than 10.0: 10
Number of HSP's gapped: 22622
Number of HSP's successfully gapped: 10
Length of query: 562
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 444
Effective length of database: 68,319,629
Effective search space: 30333915276
Effective search space used: 30333915276
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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