ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf55i03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK108209:Os05g0596200 143 2e-34
2AK107887:Os05g0596200 102 4e-22
3AK058379:Os03g0249900 75 5e-14
4AK062521:Os05g0596200 72 4e-13
5AK110507: 31 1.5
6AK110951:Os12g0257900 29 4.3
7AK103894:Os12g0257900 29 4.3

>AK108209:Os05g0596200 |
          Length = 164
 Score =  143 bits (361), Expect = 2e-34
 Identities = 85/141 (60%), Positives = 96/141 (68%)
 Frame = +2

Query: 218 VFSLTGQKFETPEEREPLRIFYESLSKQIPSSEMAQFWLMEHGLLSPERAKQAYDRKLKR 397
           V+SL GQKF+ PEEREPLRIFYESLSKQIPSSEMA+FWLMEHGLLSPERAK+AY++K KR
Sbjct: 48  VYSLPGQKFDPPEEREPLRIFYESLSKQIPSSEMAEFWLMEHGLLSPERAKKAYEKKQKR 107

Query: 398 QQQIKSGTPIKASNSTTVTKFXXXXXXXXXXXKPAESSKKPAVVPXXXXXXXXXXXAAKA 577
           QQQI+SGTPIK S                   KP ESSKKP+               +KA
Sbjct: 108 QQQIRSGTPIKPS---------------VKKDKP-ESSKKPS---------SYNSSDSKA 142

Query: 578 KRRVDYSXXXXXKEFIVKLKR 640
           K+RVDYS      +FIVKLKR
Sbjct: 143 KKRVDYS--DDDDDFIVKLKR 161



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>AK107887:Os05g0596200 |
          Length = 101

 Score =  102 bits (254), Expect = 4e-22
 Identities = 48/54 (88%), Positives = 52/54 (96%)
 Frame = +2

Query: 218 VFSLTGQKFETPEEREPLRIFYESLSKQIPSSEMAQFWLMEHGLLSPERAKQAY 379
           V+SL GQKF+ PEEREPLRIFYESLSKQIPSSEMA+FWLMEHGLLSPERAK+AY
Sbjct: 48  VYSLPGQKFDPPEEREPLRIFYESLSKQIPSSEMAEFWLMEHGLLSPERAKKAY 101



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>AK058379:Os03g0249900 |
          Length = 318

 Score = 75.5 bits (184), Expect = 5e-14
 Identities = 37/75 (49%), Positives = 57/75 (76%)
 Frame = +2

Query: 218 VFSLTGQKFETPEEREPLRIFYESLSKQIPSSEMAQFWLMEHGLLSPERAKQAYDRKLKR 397
           V+ L GQK + P+ER+PLRIFYESL +Q+P+SEMA  WLME GLL  + A++ +++  K+
Sbjct: 186 VYDLPGQKHDPPQERDPLRIFYESLYEQVPTSEMAAIWLMEWGLLPVDVAQKVFEK--KQ 243

Query: 398 QQQIKSGTPIKASNS 442
            Q++KS  P+K +++
Sbjct: 244 GQKLKS--PVKTTSA 256



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>AK062521:Os05g0596200 |
          Length = 129

 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = +2

Query: 218 VFSLTGQKFETPEEREPLRIFYESLSKQIPSSEMAQFW 331
           V+SL GQKF+ PEEREPLRIFYESLSKQIPSSEMA+FW
Sbjct: 48  VYSLPGQKFDPPEEREPLRIFYESLSKQIPSSEMAEFW 85



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>AK110507: |
          Length = 905

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +1

Query: 244 RNTRGEGAPQDLLRIALQADP-IQRDGPILVNGAWAAISGKSKASLRQEAQTAAADQIRD 420
           RN R EGAP+   R     DP + R  P+ V  A AA+  +S    R +   AAA    D
Sbjct: 366 RNERAEGAPRTANRPVRFGDPVVSRAQPLAVAAAAAAVPHRS--DRRSQPPAAAAGDDND 423

Query: 421 PD 426
            D
Sbjct: 424 VD 425



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>AK110951:Os12g0257900 |
          Length = 446

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 338 PLTRIGPSRWMGSAWRAIRRRS*GAPSPLVFR 243
           P  +IG +RW G+ W  +  RS   PSP  +R
Sbjct: 174 PGMKIGKNRWTGAEWYLLSWRSPADPSPGSYR 205



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>AK103894:Os12g0257900 |
          Length = 446

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 338 PLTRIGPSRWMGSAWRAIRRRS*GAPSPLVFR 243
           P  +IG +RW G+ W  +  RS   PSP  +R
Sbjct: 174 PGMKIGKNRWTGAEWYLLSWRSPADPSPGSYR 205


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 19,168,109
Number of extensions: 322581
Number of successful extensions: 1014
Number of sequences better than 10.0: 7
Number of HSP's gapped: 1013
Number of HSP's successfully gapped: 7
Length of query: 319
Length of database: 15,399,855
Length adjustment: 101
Effective length of query: 218
Effective length of database: 11,355,714
Effective search space: 2475545652
Effective search space used: 2475545652
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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