>LOC_Os05g51754:12005.t04695:unspliced-genomic expressed protein|
          Length = 1904
 Score = 71.6 bits (150), Expect(4) = 7e-26
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +2 / +3

                                               
Query: 332  LMEHGLLSPERAKQAYDRKLKRQQQIKSGTPIKAS 436
            LMEHGLLSPERAK+AY++K KRQQQI+SGTPIK S
Sbjct: 1125 LMEHGLLSPERAKKAYEKKQKRQQQIRSGTPIKPS 1229



 Score = 59.7 bits (124), Expect(4) = 7e-26
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = +2 / +3

                                    
Query: 257 EREPLRIFYESLSKQIPSSEMAQFW 331
           +REPLRIFYESLSKQIPSSEMA+FW
Sbjct: 612 QREPLRIFYESLSKQIPSSEMAEFW 686



 Score = 27.6 bits (54), Expect(4) = 7e-26
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +2 / +2

                         
Query: 218 VFSLTGQKFETPEE 259
           V+SL GQKF+ PEE
Sbjct: 497 VYSLPGQKFDPPEE 538



 Score = 22.6 bits (43), Expect(4) = 7e-26
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +2 / +3

                      
Query: 569  AKAKRRVDYS 598
            +KAK+RVDYS
Sbjct: 1287 SKAKKRVDYS 1316



 Score = 64.3 bits (134), Expect(3) = 4e-17
 Identities = 25/33 (75%), Positives = 27/33 (81%)
 Frame = -2 / -2

                                             
Query: 429  LIGVPDLICCCRLSFLS*ACFALSGDSSPCSIN 331
            LIGVPD ICCCR  F S A FALSGD++PCSIN
Sbjct: 1222 LIGVPDRICCCRFCFFSYAFFALSGDNNPCSIN 1124



 Score = 43.7 bits (89), Expect(3) = 4e-17
 Identities = 19/24 (79%), Positives = 21/24 (87%)
 Frame = -2 / -2

                                   
Query: 330 QNWAISLDGICLESDS*KILRGSL 259
           QN AISL+GICL+ DS* ILRGSL
Sbjct: 685 QNSAISLEGICLDKDS*NILRGSL 614



 Score = 24.4 bits (47), Expect(3) = 4e-17
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -2 / -3

                         
Query: 258 SSGVSNFWPVREKT 217
           SSG SNFWP  E T
Sbjct: 537 SSGGSNFWPGSE*T 496



 Score = 35.9 bits (72), Expect(2) = 6e-04
 Identities = 16/27 (59%), Positives = 20/27 (74%)
 Frame = +1 / +2

                                      
Query: 253 RGEGAPQDLLRIALQADPIQRDGPILV 333
           R E A QD+LR+ +QAD +Q DG ILV
Sbjct: 608 RPERASQDILRVLIQADTLQ*DG*ILV 688



 Score = 31.3 bits (62), Expect(2) = 6e-04
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3 / +1

                            
Query: 327  SG*WSMGCYLRKEQSK 374
            +G*W+ GCYL KEQ K
Sbjct: 1120 TG*WNTGCYLPKEQRK 1167



 Score = 29.9 bits (59), Expect(2) = 0.66
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = -3 / -3

                                    
Query: 332 TRIGPSRWMGSAWRAIRRRS*GAPS 258
           TRI PS W  SAW   RR S* A S
Sbjct: 687 TRIQPSHWRVSAWIRTRRIS*EALS 613



 Score = 26.7 bits (52), Expect(2) = 0.66
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -1 / -1

                             
Query: 379  VGLLCSFRR*QPMLH*P 329
            V  LCSF R*QP+ H P
Sbjct: 1172 VCFLCSFGR*QPVFHQP 1122

>LOC_Os03g14580:12003.t01247:unspliced-genomic expressed protein|
          Length = 2597

 Score = 47.8 bits (98), Expect = 1e-04
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = +2 / +3

                                     
Query: 257  EREPLRIFYESLSKQIPSSEMAQFW 331
            +R+PLRIFYESL +Q+P+SEMA  W
Sbjct: 1341 QRDPLRIFYESLYEQVPTSEMAAIW 1415

>LOC_Os04g11050:12004.t00933:unspliced-genomic expressed protein|
          Length = 4452

 Score = 35.9 bits (72), Expect = 0.44
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3 / -2

                                        
Query: 86   RTWRRRTWLKQLPAQGSRRGKGRGNSDQ 3
            R WRRR W      +G+RR +GRG +D+
Sbjct: 2153 RAWRRRLWPSGG*GRGTRRERGRGRTDE 2070

>LOC_Os06g23330:12006.t02145:unspliced-genomic conserved hypothetical protein|
          Length = 465

 Score = 30.4 bits (60), Expect(2) = 1.4
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3 / +3

                                    
Query: 80  WRRRTWLKQLPAQGSRRGKGRGNSD 6
           WRRR W +++  +G   G G G  D
Sbjct: 93  WRRRRWWQRVRGEGGSGGGGGGGGD 167



 Score = 23.1 bits (44), Expect(2) = 1.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -3 / +1

                      
Query: 581 SWPWRRNDPCC 549
           SW WRR D  C
Sbjct: 28  SWRWRREDRRC 60

>LOC_Os10g42790:12010.t03503:unspliced-genomic choline-phosphate cytidylyltransferase B, putative, expressed|
          Length = 2837

 Score = 33.1 bits (66), Expect = 3.0
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +2 / -3

                                            
Query: 821  Q*IASSDYIYLCMCCVFELRENIDITFV*AMP 916
            +*I SS  I LC+CC F  R+++ ++ +   P
Sbjct: 2826 K*ITSSSIISLCLCCAFSQRQHLSLSTLQTKP 2731

>LOC_Os12g15550:12012.t01410:unspliced-genomic S-locus-specific glycoprotein S13 precursor, putative, expressed|
          Length = 1452

 Score = 32.2 bits (64), Expect = 5.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3 / +1

                                           
Query: 338 PLTRIGPSRWMGSAWRAIRRRS*GAPSPLVFR 243
           P  +IG +RW G+ W  +  RS   PSP  +R
Sbjct: 565 PGMKIGKNRWTGAEWYLLSWRSPADPSPGSYR 660

>LOC_Os07g29190:12007.t02609:unspliced-genomic expressed protein|
          Length = 1646

 Score = 32.2 bits (64), Expect = 5.6
 Identities = 17/35 (48%), Positives = 17/35 (48%)
 Frame = -3 / -2

                                               
Query: 359  PEIAAHAPLTRIGPSRWMGSAWRAIRRRS*GAPSP 255
            P  A  A  TR   S W   AWRA RRR    PSP
Sbjct: 1126 PPPAWTASRTRHRSSSWRRGAWRARRRRRGRRPSP 1022

>LOC_Os03g37920:12003.t03243:unspliced-genomic transposon protein, putative, unclassified, expressed|
          Length = 3176

 Score = 32.2 bits (64), Expect = 5.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3 / +2

                                         
Query: 110 SRLLLYYPRTWRRRTWLKQLPAQGSRRGKG 21
           SR++   P TW+ RTW+    A G R  +G
Sbjct: 308 SRVVFTCPSTWQGRTWISITCAHGCRNRRG 397

>LOC_Os12g37400:12012.t03420:unspliced-genomic PROLIFERA protein, putative, expressed|
          Length = 5329

 Score = 31.8 bits (63), Expect = 7.7
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -3 / -3

                              
Query: 329 RIGPSRWMGSAWRAIRRRS 273
           R G   W GS WRA+RRR+
Sbjct: 290 RAGRRSWRGSPWRALRRRT 234

>LOC_Os11g24890:12011.t02109:unspliced-genomic hypothetical protein|
          Length = 1936

 Score = 31.8 bits (63), Expect = 7.7
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3 / +2

                                   
Query: 792 LFYFSPYKYNNELPLLTTYICVCV 863
           +FYF   KYN   P+L +Y CV +
Sbjct: 506 IFYFFVLKYNQCWPILQSYFCVTI 577

>LOC_Os08g37340:12008.t03471:unspliced-genomic hypothetical protein|
          Length = 348

 Score = 31.8 bits (63), Expect = 7.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3 / +3

                                         
Query: 110 SRLLLYYPRTWRRRTWLKQLPAQGSRRGKG 21
           SR++   P TW  RTW+    A G R  +G
Sbjct: 96  SRVVFTCPSTWHGRTWISITCAHGRRNHRG 185

>LOC_Os01g55974:12001.t05006:unspliced-genomic deoxycytidylate deaminase, putative, expressed|
          Length = 5946

 Score = 31.8 bits (63), Expect = 7.7
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3 / -3

                            
Query: 60   QPCPPSPGSRVVKEEA 107
            QPCPP P +R  +EEA
Sbjct: 4393 QPCPPPPAARAAREEA 4346

>LOC_Os01g16090:12001.t01459:unspliced-genomic RNA binding protein, putative, expressed|
          Length = 2819

 Score = 31.8 bits (63), Expect = 7.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3 / +1

                                          
Query: 107 RLLLYYPRTWRRRTWLKQLPAQGSRRGKGRG 15
           RL +   R WRR  W ++  +  +R G+GRG
Sbjct: 316 RLAVARKRRWRRSRWRRRWRSTRTRMGRGRG 408

>LOC_Os11g11340:12011.t01022:unspliced-genomic CIP111, putative, expressed|
          Length = 6256

 Score = 31.8 bits (63), Expect = 7.8
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1 / +1

                                        
Query: 748  WIKQYRLRFRSLTQLFFTFHPTSTTMNC 831
            WI+ + +R  + +  +FT HP+ +T  C
Sbjct: 2836 WIRHFSMRMMTSSPTYFTVHPSMSTSMC 2919

>LOC_Os03g08270:12003.t00685:unspliced-genomic ataxin-2 C-terminal region family protein, expressed|
          Length = 6992

 Score = 31.8 bits (63), Expect = 7.8
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +2 / +1

                                            
Query: 317  MAQFWLMEHGLLSPERAKQAYDRKLKRQQQIK 412
            +AQF+++  G +SP R   AY + + R++ IK
Sbjct: 2167 LAQFYMIGIGRISPARLSSAYHQYVHRRENIK 2262

>LOC_Os06g01810:12006.t00077:unspliced-genomic expressed protein|
          Length = 2746

 Score = 30.4 bits (60), Expect(2) = 9.6
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3 / -1

                                         
Query: 107 RLLLYYPRTWRRRTWLKQLPAQGSRRGKGR 18
           RLL     TWRRR+W ++     S RG+ R
Sbjct: 199 RLLPTSTTTWRRRSWRRRGSRSRSGRGRSR 110



 Score = 22.6 bits (43), Expect(2) = 9.6
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3 / -3

                                 
Query: 344  HAPLTRIGPSRWMGSAWRAIR 282
            H+P     P  W+GS W  ++
Sbjct: 1271 HSPYP**LPFHWLGSCWGGLK 1209


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 275,723,287
Number of extensions: 3474448
Number of successful extensions: 19820
Number of sequences better than 10.0: 16
Length of query: 319
Length of database: 55,613,886
Length adjustment: 50
Effective length of query: 269
Effective length of database: 52,799,986
Effective search space: 14203196234
Effective search space used: 14203196234
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)