Clone Information

BLAST Search Result

Clone Name	FLbaf50m22
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	Q922J6:TSN2_MOUSE Tetraspanin-2 - Mus musculus (Mouse)	39	0.062
2	P40237:CD82_MOUSE CD82 antigen - Mus musculus (Mouse)	37	0.14
3	O60636:TSN2_HUMAN Tetraspanin-2 - Homo sapiens (Human)	37	0.18
4	P19331:IM23_SCHMA 23 kDa integral membrane protein - Schistosoma...	37	0.18
5	Q26499:IM23_SCHHA 23 kDa integral membrane protein - Schistosoma...	37	0.18
6	O70352:CD82_RAT CD82 antigen - Rattus norvegicus (Rat)	37	0.18
7	P27701:CD82_HUMAN CD82 antigen - Homo sapiens (Human)	37	0.23
8	P19397:CD53_HUMAN Leukocyte surface antigen CD53 - Homo sapiens ...	37	0.23
9	Q3T0S3:TSN1_BOVIN Tetraspanin-1 - Bos taurus (Bovine)	36	0.40
10	Q9JJW1:TSN2_RAT Tetraspanin-2 - Rattus norvegicus (Rat)	35	0.52
11	Q5RC27:TSN1_PONPY Tetraspanin-1 - Pongo pygmaeus (Orangutan)	35	0.52
12	O60635:TSN1_HUMAN Tetraspanin-1 - Homo sapiens (Human)	35	0.52
13	P27591:IM23_SCHJA 23 kDa integral membrane protein - Schistosoma...	35	0.52
14	Q68VK5:TSN5_RAT Tetraspanin-5 - Rattus norvegicus (Rat)	34	1.5
15	P62080:TSN5_MOUSE Tetraspanin-5 - Mus musculus (Mouse)	34	1.5
16	P62079:TSN5_HUMAN Tetraspanin-5 - Homo sapiens (Human)	34	1.5
17	Q17QJ5:TSN5_BOVIN Tetraspanin-5 - Bos taurus (Bovine)	34	1.5
18	Q6GQF5:TSN33_XENLA Tetraspanin-33 - Xenopus laevis (African claw...	34	1.5
19	P24485:CD53_RAT Leukocyte surface antigen CD53 - Rattus norvegic...	34	1.5
20	Q58DM3:CD53_BOVIN Leukocyte surface antigen CD53 - Bos taurus (B...	34	1.5
21	P40239:CD9_FELCA CD9 antigen - Felis silvestris catus (Cat)	33	2.0
22	P30932:CD9_BOVIN CD9 antigen - Bos taurus (Bovine)	33	2.0
23	Q61451:CD53_MOUSE Leukocyte surface antigen CD53 - Mus musculus ...	33	2.6
24	Q8BJU2:TSN9_MOUSE Tetraspanin-9 - Mus musculus (Mouse)	33	3.4
25	O75954:TSN9_HUMAN Tetraspanin-9 - Homo sapiens (Human)	33	3.4
26	Q8VCF5:TSN10_MOUSE Tetraspanin-10 - Mus musculus (Mouse)	33	3.4
27	Q8WMQ3:CD9_PIG CD9 antigen - Sus scrofa (Pig)	33	3.4
28	P14501:NEOR_STRCY Neomycin resistance protein - Streptomyces cya...	32	4.4
29	P40241:CD9_RAT CD9 antigen - Rattus norvegicus (Rat)	32	4.4
30	P40240:CD9_MOUSE CD9 antigen - Mus musculus (Mouse)	32	4.4
31	P21926:CD9_HUMAN CD9 antigen - Homo sapiens (Human)	32	4.4
32	P30409:CD9_CERAE CD9 antigen - Cercopithecus aethiops (Green mon...	32	4.4
33	Q9QY33:TSN3_MOUSE Tetraspanin-3 - Mus musculus (Mouse)	32	5.8
34	Q9N0J9:CD81_SAGOE CD81 protein - Saguinus oedipus (Cotton-top ta...	32	5.8
35	Q62745:CD81_RAT CD81 antigen - Rattus norvegicus (Rat)	32	5.8
36	P60034:CD81_PANTR CD81 antigen - Pan troglodytes (Chimpanzee)	32	5.8
37	P35762:CD81_MOUSE CD81 antigen - Mus musculus (Mouse)	32	5.8
38	P60033:CD81_HUMAN CD81 antigen - Homo sapiens (Human)	32	5.8
39	O97703:CD81_CERAE CD81 antigen - Cercopithecus aethiops (Green m...	32	5.8
40	Q3ZCD0:CD81_BOVIN CD81 antigen - Bos taurus (Bovine)	32	5.8
41	Q76B49:CD63_FELCA CD63 antigen - Felis silvestris catus (Cat)	32	7.5
42	O77788:NFM_BOVIN Neurofilament medium polypeptide - Bos taurus (...	31	9.9
43	P28648:CD63_RAT CD63 antigen - Rattus norvegicus (Rat)	31	9.9
44	P41731:CD63_MOUSE CD63 antigen - Mus musculus (Mouse)	31	9.9
45	Q9XSK2:CD63_BOVIN CD63 antigen - Bos taurus (Bovine)	31	9.9

>Q922J6:TSN2_MOUSE Tetraspanin-2 - Mus musculus (Mouse)|
          Length = 221
 Score = 38.5 bits (88), Expect = 0.062
 Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
 Frame = +2

Query: 110 MAACRGFFECLLRLL---NFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXEL 280
           M   RG   C+  LL   N    +AG A++ +G+     W R                  
Sbjct: 1   MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGL-----WFR------------------ 37

Query: 281 LMFGRPMLTVVALGEGGSFFDKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
             FG  M  +       S  DK PE +++  Y+ +G GA++  V  FGC GA   + C L
Sbjct: 38  --FGGTMKDL-------SSEDKSPEYFYVGLYVLVGAGALMMTVGFFGCCGAMRESQCVL 88

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>P40237:CD82_MOUSE CD82 antigen - Mus musculus (Mouse)|
          Length = 266

 Score = 37.4 bits (85), Expect = 0.14
 Identities = 29/117 (24%), Positives = 43/117 (36%)
 Frame = +2

Query: 113 AACRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFG 292
           A C    +  L L N    + G  ++G+G+++LA+                    +L   
Sbjct: 3   AGCVKVTKYFLFLFNLLFFILGAVILGFGVWILAD--------------KNSFISVLQTS 48

Query: 293 RPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 463
              L V A                 Y+FIGVGA+  ++   GCIGA     C L  Y
Sbjct: 49  SSSLQVGA-----------------YVFIGVGAITIVMGFLGCIGAVNEVRCLLGLY 88

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>O60636:TSN2_HUMAN Tetraspanin-2 - Homo sapiens (Human)|
          Length = 221

 Score = 37.0 bits (84), Expect = 0.18
 Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
 Frame = +2

Query: 110 MAACRGFFECLLRLL---NFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXEL 280
           M   RG   C+  LL   N    +AG A++ +G+     W R                  
Sbjct: 1   MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGL-----WFR------------------ 37

Query: 281 LMFGRPMLTVVALGEGGSFFDKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
             FG  +  +       S  DK PE +++  Y+ +G GA++  V  FGC GA   + C L
Sbjct: 38  --FGGAIKEL-------SSEDKSPEYFYVGLYVLVGAGALMMAVGFFGCCGAMRESQCVL 88

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>P19331:IM23_SCHMA 23 kDa integral membrane protein - Schistosoma mansoni (Blood|
           fluke)
          Length = 218

 Score = 37.0 bits (84), Expect = 0.18
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = +2

Query: 278 LLMFGRPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLC 457
           L++ G      V   + G    K+ +A  I + + VG +I IVS  GC GA   N C L 
Sbjct: 27  LVLIGAGAYVEVKFSQYGDNLHKVWQAAPIAIIV-VGVIILIVSFLGCCGAIKENVCMLY 85

Query: 458 CYSFLV 475
            Y+F +
Sbjct: 86  MYAFFL 91

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>Q26499:IM23_SCHHA 23 kDa integral membrane protein - Schistosoma haematobium (Blood|
           fluke)
          Length = 218

 Score = 37.0 bits (84), Expect = 0.18
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = +2

Query: 278 LLMFGRPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLC 457
           L++ G      V   + G    K+ +A  I + + VG +I IVS  GC GA   N C L 
Sbjct: 27  LVLIGAGAYVEVKFSQYGDNLHKVWQAAPIAIIV-VGVIILIVSFLGCCGAIKENVCMLY 85

Query: 458 CYSFLV 475
            Y+F +
Sbjct: 86  MYAFFL 91

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>O70352:CD82_RAT CD82 antigen - Rattus norvegicus (Rat)|
          Length = 266

 Score = 37.0 bits (84), Expect = 0.18
 Identities = 29/117 (24%), Positives = 43/117 (36%)
 Frame = +2

Query: 113 AACRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFG 292
           A C    +  L L N    + G  ++G+G+++LA+                    +L   
Sbjct: 3   AGCVKVTKYFLFLFNLLFFILGAVILGFGVWILAD--------------KSSFISVLQTS 48

Query: 293 RPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 463
              L V A                 Y+FIGVGA+  ++   GCIGA     C L  Y
Sbjct: 49  SSSLQVGA-----------------YVFIGVGAITMLMGFLGCIGAVNEVRCLLGLY 88

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>P27701:CD82_HUMAN CD82 antigen - Homo sapiens (Human)|
          Length = 267

 Score = 36.6 bits (83), Expect = 0.23
 Identities = 29/117 (24%), Positives = 44/117 (37%)
 Frame = +2

Query: 113 AACRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFG 292
           +AC    +  L L N    + G  ++G+G+++LA+                    +L   
Sbjct: 3   SACIKVTKYFLFLFNLIFFILGAVILGFGVWILAD--------------KSSFISVLQTS 48

Query: 293 RPMLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 463
              L + A                 Y+FIGVGAV  ++   GCIGA     C L  Y
Sbjct: 49  SSSLRMGA-----------------YVFIGVGAVTMLMGFLGCIGAVNEVRCLLGLY 88

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>P19397:CD53_HUMAN Leukocyte surface antigen CD53 - Homo sapiens (Human)|
          Length = 219

 Score = 36.6 bits (83), Expect = 0.23
 Identities = 25/112 (22%), Positives = 40/112 (35%)
 Frame = +2

Query: 140 LLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRPMLTVVAL 319
           +L   N    + G  ++G+GIYLL                                    
Sbjct: 12  VLFFFNLLFWICGCCILGFGIYLLIH---------------------------------- 37

Query: 320 GEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 475
              G  F  LP      +F+ VG++I +V+  GC+G+   N C L  +  L+
Sbjct: 38  NNFGVLFHNLPSLTLGNVFVIVGSIIMVVAFLGCMGSIKENKCLLMSFFILL 89

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>Q3T0S3:TSN1_BOVIN Tetraspanin-1 - Bos taurus (Bovine)|
          Length = 241

 Score = 35.8 bits (81), Expect = 0.40
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 368 YLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 475
           Y  I  GAV+F +   GC GA T + C L  + F++
Sbjct: 58  YFLIAAGAVLFALGFLGCYGAQTESKCALMTFFFIL 93

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>Q9JJW1:TSN2_RAT Tetraspanin-2 - Rattus norvegicus (Rat)|
          Length = 221

 Score = 35.4 bits (80), Expect = 0.52
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
 Frame = +2

Query: 110 MAACRGFFECLLRLL---NFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXEL 280
           M   RG   C+  LL   N    +AG A++ +G+     W R                  
Sbjct: 1   MGRFRGGLRCIKYLLLGFNLLFWLAGSAVIAFGL-----WFR------------------ 37

Query: 281 LMFGRPMLTVVALGEGGSFFDKLPEAWFI--YLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
             FG  +  +       S  +K PE +++  Y+ +G GA++  V  FGC GA   + C L
Sbjct: 38  --FGGTIKDL-------SSEEKSPEYFYVGLYVLVGAGALMMAVGFFGCCGAMRESQCVL 88

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>Q5RC27:TSN1_PONPY Tetraspanin-1 - Pongo pygmaeus (Orangutan)|
          Length = 241

 Score = 35.4 bits (80), Expect = 0.52
 Identities = 27/119 (22%), Positives = 44/119 (36%)
 Frame = +2

Query: 119 CRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRP 298
           C  F + ++ L N  + + G A++  GI     W+ I                L +FG  
Sbjct: 3   CFSFIKTMMILFNLLIFLCGAALLAVGI-----WVSIDGASF-----------LKIFGPL 46

Query: 299 MLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 475
             + +     G            Y  I  G V+F +   GC GA T + C L  + F++
Sbjct: 47  SSSAMQFVNVG------------YFLIAAGVVVFALGFLGCYGAKTESKCALMTFFFIL 93

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>O60635:TSN1_HUMAN Tetraspanin-1 - Homo sapiens (Human)|
          Length = 241

 Score = 35.4 bits (80), Expect = 0.52
 Identities = 27/119 (22%), Positives = 44/119 (36%)
 Frame = +2

Query: 119 CRGFFECLLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRP 298
           C  F + ++ L N  + + G A++  GI     W+ I                L +FG  
Sbjct: 3   CFSFIKTMMILFNLLIFLCGAALLAVGI-----WVSIDGASF-----------LKIFGPL 46

Query: 299 MLTVVALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 475
             + +     G            Y  I  G V+F +   GC GA T + C L  + F++
Sbjct: 47  SSSAMQFVNVG------------YFLIAAGVVVFALGFLGCYGAKTESKCALVTFFFIL 93

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>P27591:IM23_SCHJA 23 kDa integral membrane protein - Schistosoma japonicum (Blood|
           fluke)
          Length = 218

 Score = 35.4 bits (80), Expect = 0.52
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = +2

Query: 377 IGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 475
           I VG VI IVS  GC GA   N C L  Y+F +
Sbjct: 59  IVVGVVILIVSFLGCCGAIKENVCMLYMYAFFL 91

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>Q68VK5:TSN5_RAT Tetraspanin-5 - Rattus norvegicus (Rat)|
          Length = 268

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 466
           ++LF+ VG V+FI+   GCIGA   NT  L  +S
Sbjct: 62  VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFS 95

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>P62080:TSN5_MOUSE Tetraspanin-5 - Mus musculus (Mouse)|
          Length = 268

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 466
           ++LF+ VG V+FI+   GCIGA   NT  L  +S
Sbjct: 62  VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFS 95

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>P62079:TSN5_HUMAN Tetraspanin-5 - Homo sapiens (Human)|
          Length = 268

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 466
           ++LF+ VG V+FI+   GCIGA   NT  L  +S
Sbjct: 62  VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFS 95

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>Q17QJ5:TSN5_BOVIN Tetraspanin-5 - Bos taurus (Bovine)|
          Length = 268

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 466
           ++LF+ VG V+FI+   GCIGA   NT  L  +S
Sbjct: 62  VWLFLVVGGVMFILGFAGCIGALRENTFLLKFFS 95

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>Q6GQF5:TSN33_XENLA Tetraspanin-33 - Xenopus laevis (African clawed frog)|
          Length = 268

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +2

Query: 371 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYS 466
           L IGVG ++F+++  GCIG+   N C L  +S
Sbjct: 66  LLIGVGILMFLITFCGCIGSLRENICLLQTFS 97

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>P24485:CD53_RAT Leukocyte surface antigen CD53 - Rattus norvegicus (Rat)|
          Length = 219

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 25/112 (22%), Positives = 41/112 (36%)
 Frame = +2

Query: 140 LLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRPMLTVVAL 319
           +L   NF   V G  ++G+GI+LL +                                  
Sbjct: 12  VLFFFNFLFWVCGCCILGFGIHLLVQ---------------------------------- 37

Query: 320 GEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 475
              G  F  LP      + + VG++I +V+  GC+G+   N C L  +  L+
Sbjct: 38  NTYGILFRNLPFLTLGNVLVIVGSIIMVVAFLGCMGSIKENKCLLMSFFVLL 89

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>Q58DM3:CD53_BOVIN Leukocyte surface antigen CD53 - Bos taurus (Bovine)|
          Length = 219

 Score = 33.9 bits (76), Expect = 1.5
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = +2

Query: 329 GSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 475
           G  F  LP      + + VG+VI +V+  GC+G+   N C L  +  L+
Sbjct: 41  GVLFHNLPSLTLGNVLVIVGSVIMVVAFLGCMGSIKENKCLLMSFFVLL 89

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>P40239:CD9_FELCA CD9 antigen - Felis silvestris catus (Cat)|
          Length = 226

 Score = 33.5 bits (75), Expect = 2.0
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
 Frame = +2

Query: 341 DKLPEAWF--IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
           D  P +++  +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 48  DSQPSSFYTGVYILIGAGALMMLVGFLGCCGAVQESQCML 87

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>P30932:CD9_BOVIN CD9 antigen - Bos taurus (Bovine)|
          Length = 226

 Score = 33.5 bits (75), Expect = 2.0
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL-CCYSFLV 475
           +Y+ IG GA++ +V   GC GA   + C L   +SFL+
Sbjct: 58  VYILIGAGALMMLVGFLGCCGAVQESQCMLGLFFSFLL 95

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>Q61451:CD53_MOUSE Leukocyte surface antigen CD53 - Mus musculus (Mouse)|
          Length = 219

 Score = 33.1 bits (74), Expect = 2.6
 Identities = 24/112 (21%), Positives = 40/112 (35%)
 Frame = +2

Query: 140 LLRLLNFFLTVAGLAMVGYGIYLLAEWMRIXXXXXXXXXXXXXXXELLMFGRPMLTVVAL 319
           +L + N    V G  ++G+GIY L +                                  
Sbjct: 12  VLFIFNLLFWVCGCCILGFGIYFLVQ---------------------------------- 37

Query: 320 GEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 475
              G  F  LP      + + VG++I +V+  GC+G+   N C L  +  L+
Sbjct: 38  NTYGVLFRNLPFLTLGNILVIVGSIIMVVAFLGCMGSIKENKCLLMSFFVLL 89

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>Q8BJU2:TSN9_MOUSE Tetraspanin-9 - Mus musculus (Mouse)|
          Length = 239

 Score = 32.7 bits (73), Expect = 3.4
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +2

Query: 311 VALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 463
           V+ G   +F    P      L I +G ++ +    GC+GA   N C L  +
Sbjct: 36  VSQGNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSF 86

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>O75954:TSN9_HUMAN Tetraspanin-9 - Homo sapiens (Human)|
          Length = 239

 Score = 32.7 bits (73), Expect = 3.4
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +2

Query: 311 VALGEGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCY 463
           V+ G   +F    P      L I +G ++ +    GC+GA   N C L  +
Sbjct: 36  VSQGNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSF 86

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>Q8VCF5:TSN10_MOUSE Tetraspanin-10 - Mus musculus (Mouse)|
          Length = 331

 Score = 32.7 bits (73), Expect = 3.4
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
 Frame = +2

Query: 284 MFGRPMLTVVALG---------EGGSFFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGT 436
           +F  P L  +A G         +G  +   +P    + L +G G V+ +VSL GC+GA  
Sbjct: 84  LFSLPSLLALAAGLWGLTVKRSQGIGWGGPVPTDPMLMLVLG-GLVVSVVSLSGCLGAFC 142

Query: 437 RNTCCLCCY 463
            N+C L  Y
Sbjct: 143 ENSCLLHWY 151

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>Q8WMQ3:CD9_PIG CD9 antigen - Sus scrofa (Pig)|
          Length = 226

 Score = 32.7 bits (73), Expect = 3.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 58  VYILIGAGALMMVVGFLGCCGAVQESQCML 87

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>P14501:NEOR_STRCY Neomycin resistance protein - Streptomyces cyanogenus|
          Length = 437

 Score = 32.3 bits (72), Expect = 4.4
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
 Frame = -2

Query: 227 SSSTPRAGRSHS----RPWQGRRR*GKS*AA*AGTRRIPGTPPSRNDLIKPPGTICKLI 63
           SSS+ R+GR       R   GR+  G      AGTRR  G PP ++D+++ P  I  L+
Sbjct: 223 SSSSVRSGRQRPGRVHRQDAGRQEPGPG----AGTRRPQGRPPGQHDVLRTPSRIGDLM 277

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>P40241:CD9_RAT CD9 antigen - Rattus norvegicus (Rat)|
          Length = 226

 Score = 32.3 bits (72), Expect = 4.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 58  VYILIGAGALMMLVGFLGCCGAVQESQCML 87

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>P40240:CD9_MOUSE CD9 antigen - Mus musculus (Mouse)|
          Length = 226

 Score = 32.3 bits (72), Expect = 4.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 58  VYILIGAGALMMLVGFLGCCGAVQESQCML 87

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>P21926:CD9_HUMAN CD9 antigen - Homo sapiens (Human)|
          Length = 228

 Score = 32.3 bits (72), Expect = 4.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 60  VYILIGAGALMMLVGFLGCCGAVQESQCML 89

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>P30409:CD9_CERAE CD9 antigen - Cercopithecus aethiops (Green monkey) (Grivet)|
          Length = 228

 Score = 32.3 bits (72), Expect = 4.4
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
           +Y+ IG GA++ +V   GC GA   + C L
Sbjct: 60  VYILIGAGALMMLVGFLGCCGAVQESQCML 89

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>Q9QY33:TSN3_MOUSE Tetraspanin-3 - Mus musculus (Mouse)|
          Length = 253

 Score = 32.0 bits (71), Expect = 5.8
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 335 FFDKLPEAWFIYLFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 475
           FF+ +   +   + I VGA++FI+ L GC      + C L  + F++
Sbjct: 44  FFEDVYTLFPAVVIIAVGALLFIIGLIGCCATIRESRCGLATFVFIL 90

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>Q9N0J9:CD81_SAGOE CD81 protein - Saguinus oedipus (Cotton-top tamarin)|
          Length = 236

 Score = 32.0 bits (71), Expect = 5.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>Q62745:CD81_RAT CD81 antigen - Rattus norvegicus (Rat)|
          Length = 236

 Score = 32.0 bits (71), Expect = 5.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>P60034:CD81_PANTR CD81 antigen - Pan troglodytes (Chimpanzee)|
          Length = 236

 Score = 32.0 bits (71), Expect = 5.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>P35762:CD81_MOUSE CD81 antigen - Mus musculus (Mouse)|
          Length = 236

 Score = 32.0 bits (71), Expect = 5.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>P60033:CD81_HUMAN CD81 antigen - Homo sapiens (Human)|
          Length = 236

 Score = 32.0 bits (71), Expect = 5.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>O97703:CD81_CERAE CD81 antigen - Cercopithecus aethiops (Green monkey) (Grivet)|
          Length = 236

 Score = 32.0 bits (71), Expect = 5.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>Q3ZCD0:CD81_BOVIN CD81 antigen - Bos taurus (Bovine)|
          Length = 236

 Score = 32.0 bits (71), Expect = 5.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 365 IYLFIGVGAVIFIVSLFGCIGAGTRNTCCL 454
           IY+ I VGAV+  V   GC GA   + C L
Sbjct: 62  IYILIAVGAVMMFVGFLGCYGAIQESQCLL 91

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>Q76B49:CD63_FELCA CD63 antigen - Felis silvestris catus (Cat)|
          Length = 238

 Score = 31.6 bits (70), Expect = 7.5
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
 Frame = +2

Query: 278 LLMFGRPMLTVVALGEGGSFFDK-------LPEAWFIYLFIGVGAVIFIVSLFGCIGAGT 436
           LL F    + ++A+G G     +        P +    + I VGA +F+V+  GC GA  
Sbjct: 18  LLAFCACAVGLIAVGVGAQLVLRQTIVQGATPGSLLPVVIIAVGAFLFLVAFVGCCGACK 77

Query: 437 RNTCCLCCYSFLV 475
            N C +  ++  +
Sbjct: 78  ENYCLMVTFAIFL 90

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>O77788:NFM_BOVIN Neurofilament medium polypeptide - Bos taurus (Bovine)|
          Length = 926

 Score = 31.2 bits (69), Expect = 9.9
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -3

Query: 247 PSATTGDPHPLREQVDPIADHG-KAGDGEEKVEQPKQALEESPARRHLE 104
           P+A +  P    E+V P A+ G + G+ +EKVE+ K+  +ESP     E
Sbjct: 686 PAAKSPAPKSPVEEVKPKAEAGAEKGEQKEKVEEEKKEAKESPKEEKAE 734

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>P28648:CD63_RAT CD63 antigen - Rattus norvegicus (Rat)|
          Length = 238

 Score = 31.2 bits (69), Expect = 9.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 371 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 475
           + I VGA +F+V+  GC GA   N C +  ++  +
Sbjct: 56  VIIAVGAFLFLVAFVGCCGACKENYCLMITFAIFL 90

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>P41731:CD63_MOUSE CD63 antigen - Mus musculus (Mouse)|
          Length = 238

 Score = 31.2 bits (69), Expect = 9.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 371 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 475
           + I VGA +F+V+  GC GA   N C +  ++  +
Sbjct: 56  VIIAVGAFLFLVAFVGCCGACKENYCLMITFAIFL 90

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>Q9XSK2:CD63_BOVIN CD63 antigen - Bos taurus (Bovine)|
          Length = 237

 Score = 31.2 bits (69), Expect = 9.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 371 LFIGVGAVIFIVSLFGCIGAGTRNTCCLCCYSFLV 475
           + I VGA +F+V+  GC GA   N C +  ++  +
Sbjct: 56  VIIAVGAFLFLVAFVGCCGACKENYCLMITFAIFL 90


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 240,321,925
Number of extensions: 5640270
Number of successful extensions: 14517
Number of sequences better than 10.0: 45
Number of HSP's gapped: 14501
Number of HSP's successfully gapped: 47
Length of query: 432
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 316
Effective length of database: 68,868,219
Effective search space: 21762357204
Effective search space used: 21762357204
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result