ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf50l19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1P70498:PLD2_RAT Phospholipase D2 - Rattus norvegicus (Rat) 32 9.3

>P70498:PLD2_RAT Phospholipase D2 - Rattus norvegicus (Rat)|
          Length = 933
 Score = 32.3 bits (72), Expect = 9.3
 Identities = 28/85 (32%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
 Frame = +1

Query: 1405 LQPAHMDFRFFSLGNLWAISSSLTTPTQAE---GILSLIEEKWDDLIAYMPLKICYPAME 1575
            L P     R   L  LWA    L    QA    G L L   +WDD + Y    +  P+  
Sbjct: 423  LHPNIKVMRHPDLVTLWAHHEKLLVVDQAVAFLGGLDLAYGRWDD-VQYRLTDLGDPSES 481

Query: 1576 YDEWRIITGSDPKNTPWSYHNGGSW 1650
             D      GSDP  TP   HN   W
Sbjct: 482  ADSQTPTPGSDPAATPDLSHNHFFW 506


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 413,541,813
Number of extensions: 9278365
Number of successful extensions: 24589
Number of sequences better than 10.0: 1
Number of HSP's gapped: 24581
Number of HSP's successfully gapped: 1
Length of query: 798
Length of database: 100,686,439
Length adjustment: 121
Effective length of query: 677
Effective length of database: 67,496,744
Effective search space: 45695295688
Effective search space used: 45695295688
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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