ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf53c02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK109164:Os01g0247900 | 244 | 7e-65 | 2 | AK067766:Os01g0699900 | 169 | 2e-42 | 3 | U57639:Os07g0422100 | 84 | 1e-16 | 4 | AK063592:Os07g0422100 | 84 | 1e-16 | 5 | Os02g0731500:Os02g0731500 | 81 | 8e-16 | 6 | AK102039:Os05g0381400 | 79 | 3e-15 | 7 | Os10g0464300:Os10g0464300 | 50 | 1e-06 | 8 | Os11g0689400:Os11g0689400 | 37 | 0.022 | 9 | AK068228:Os02g0726700 | 32 | 0.54 | 10 | AK064674:Os02g0726700 | 32 | 0.54 | 11 | AK070982:Os02g0810900 | 32 | 0.71 | 12 | AK060976:Os02g0810900 | 32 | 0.71 | 13 | AK072824:Os04g0606800 | 31 | 0.93 | 14 | Os02g0203000:Os02g0203000 | 30 | 2.7 | 15 | Os12g0608700:Os12g0608700 | 29 | 4.6 | 16 | Os02g0628600:Os02g0628600 | 29 | 4.6 | 17 | Os01g0580800:Os01g0580800 | 28 | 6.0 | 18 | Os07g0567000:Os07g0567000 | 28 | 6.0 | 19 | AK111019:Os01g0166200 | 28 | 6.0 | 20 | AK101356:Os07g0679700 | 28 | 7.8 | 21 | Os02g0166500:Os02g0166500 | 28 | 7.8 | 22 | AK121639:Os03g0669800 | 28 | 7.8 | 23 | AK101670:Os03g0602300 | 28 | 7.8 | 24 | AK072295:Os03g0602300 | 28 | 7.8 | 25 | AB084385:Os03g0602300 | 28 | 7.8 |
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>AK109164:Os01g0247900 | Length = 171 Score = 244 bits (622), Expect = 7e-65 Identities = 120/167 (71%), Positives = 135/167 (80%) Frame = +3 Query: 114 MADNLKPVALFLLMLNFCMYLILAIIGGWAVNFAIDQGFIIGPELRLPAHFHPIFFPIGN 293 MA+ LKPVAL LL+LN CMY+ILAIIGGWAVN +ID+GFI+GP LRLPAHFHP+FFPIGN Sbjct: 1 MAETLKPVALLLLILNLCMYVILAIIGGWAVNISIDRGFILGPGLRLPAHFHPMFFPIGN 60 Query: 294 FATGFFVVFSLLAGVVGLASCIVGFSHVRFWNYXXXXXXXXXXXXXXXXTVLAMGLACQE 473 +ATGFFVVFSLLAGVVG+AS +VGFSH+R WNY TVLAMGLACQE Sbjct: 61 WATGFFVVFSLLAGVVGIASGLVGFSHIRHWNYYSLQPAATTGLLAWALTVLAMGLACQE 120 Query: 474 ISFDRRNAKLGTMEAFTIALTVTQLFYILVIKAGGHGPVQVERHNAL 614 IS DRRNAKLGTMEAFTI LT TQLFY+L I +G GPV VER +A+ Sbjct: 121 ISLDRRNAKLGTMEAFTIVLTATQLFYVLAIHSGSRGPVPVERTHAV 167
>AK067766:Os01g0699900 | Length = 156 Score = 169 bits (428), Expect = 2e-42 Identities = 82/150 (54%), Positives = 106/150 (70%) Frame = +3 Query: 126 LKPVALFLLMLNFCMYLILAIIGGWAVNFAIDQGFIIGPELRLPAHFHPIFFPIGNFATG 305 LKPVA LL+LNFCMY+I+A +GGWA+N AI G+ IG + LPA+F PI+FP+GN ATG Sbjct: 6 LKPVAGLLLVLNFCMYVIVAAVGGWAINHAIHTGYFIGSGMALPANFSPIYFPMGNAATG 65 Query: 306 FFVVFSLLAGVVGLASCIVGFSHVRFWNYXXXXXXXXXXXXXXXXTVLAMGLACQEISFD 485 FFV+F+++AGVVG A+ + GF HVR W++ T+LAMGLA +EI Sbjct: 66 FFVIFAVIAGVVGAAAALAGFHHVRAWSHESLPAAASSGFIAWTLTLLAMGLAVKEIDLH 125 Query: 486 RRNAKLGTMEAFTIALTVTQLFYILVIKAG 575 RNA+L TME+FTI L+ TQLFY+L I G Sbjct: 126 GRNARLKTMESFTIILSATQLFYLLAIHGG 155
>U57639:Os07g0422100 | Length = 173 Score = 84.0 bits (206), Expect = 1e-16 Identities = 55/147 (37%), Positives = 71/147 (48%), Gaps = 1/147 (0%) Frame = +3 Query: 147 LLMLNFCMYLILAIIGGWAVNFAIDQGFIIGPELRLPAHFHPIFFPIGNFATGFFVVFSL 326 LL+LN MYLI+ W +N I + P GN AT +F+VF++ Sbjct: 12 LLVLNLIMYLIVIGFASWNLNH------FINGQTNYPG-------VAGNGATFYFLVFAI 58 Query: 327 LAGVVGLASCIVGFSHVRFWNYXXXXXXXXXXXXXXXXTVLAMGLACQEISF-DRRNAKL 503 LAGVVG AS + G HVR W + T LA GLAC+EI R +L Sbjct: 59 LAGVVGAASKLAGVHHVRAWRHDSLATNAASSLIAWAITALAFGLACKEIHIGGHRGWRL 118 Query: 504 GTMEAFTIALTVTQLFYILVIKAGGHG 584 +EAF I L TQL Y+L++ G G Sbjct: 119 RVLEAFVIILAFTQLLYVLMLHTGLFG 145
>AK063592:Os07g0422100 | Length = 173 Score = 84.0 bits (206), Expect = 1e-16 Identities = 55/147 (37%), Positives = 71/147 (48%), Gaps = 1/147 (0%) Frame = +3 Query: 147 LLMLNFCMYLILAIIGGWAVNFAIDQGFIIGPELRLPAHFHPIFFPIGNFATGFFVVFSL 326 LL+LN MYLI+ W +N I + P GN AT +F+VF++ Sbjct: 12 LLVLNLIMYLIVIGFASWNLNH------FINGQTNYPG-------VAGNGATFYFLVFAI 58 Query: 327 LAGVVGLASCIVGFSHVRFWNYXXXXXXXXXXXXXXXXTVLAMGLACQEISF-DRRNAKL 503 LAGVVG AS + G HVR W + T LA GLAC+EI R +L Sbjct: 59 LAGVVGAASKLAGVHHVRAWRHDSLATNAASSLIAWAITALAFGLACKEIHIGGHRGWRL 118 Query: 504 GTMEAFTIALTVTQLFYILVIKAGGHG 584 +EAF I L TQL Y+L++ G G Sbjct: 119 RVLEAFVIILAFTQLLYVLMLHTGLFG 145
>Os02g0731500:Os02g0731500 | Length = 185 Score = 81.3 bits (199), Expect = 8e-16 Identities = 49/146 (33%), Positives = 72/146 (49%) Frame = +3 Query: 147 LLMLNFCMYLILAIIGGWAVNFAIDQGFIIGPELRLPAHFHPIFFPIGNFATGFFVVFSL 326 LL +N M+ + + GW++N ID H H GN ++G+ +VFSL Sbjct: 14 LLCVNLVMHAAVLGLAGWSLNKFIDG----------ETHHHLG----GNTSSGYLLVFSL 59 Query: 327 LAGVVGLASCIVGFSHVRFWNYXXXXXXXXXXXXXXXXTVLAMGLACQEISFDRRNAKLG 506 +AGVVG+ S + HVR W T L+ GLAC+ I+ R +L Sbjct: 60 MAGVVGVCSVLPRLLHVRAWRGETLAAAASTGLVSWALTALSFGLACKHITLGNRGRRLR 119 Query: 507 TMEAFTIALTVTQLFYILVIKAGGHG 584 T+EAF LT+TQL Y++++ G G Sbjct: 120 TLEAFIAILTLTQLLYLILLHTGSLG 145
>AK102039:Os05g0381400 | Length = 173 Score = 79.3 bits (194), Expect = 3e-15 Identities = 54/144 (37%), Positives = 69/144 (47%), Gaps = 1/144 (0%) Frame = +3 Query: 147 LLMLNFCMYLILAIIGGWAVNFAIDQGFIIGPELRLPAHFHPIFFPIGNFATGFFVVFSL 326 LL+LN MYLI+ W +N I+ E P GN AT +F+VF++ Sbjct: 12 LLVLNLIMYLIVIGFASWNLNHYING------ETNHPG-------VAGNGATFYFLVFAI 58 Query: 327 LAGVVGLASCIVGFSHVRFWNYXXXXXXXXXXXXXXXXTVLAMGLACQEISF-DRRNAKL 503 LAGVVG AS + G HVR W T LA GLAC+EI R +L Sbjct: 59 LAGVVGAASKLAGVHHVRSWGAHSLAAGAASALIAWAITALAFGLACKEIHIGGYRGWRL 118 Query: 504 GTMEAFTIALTVTQLFYILVIKAG 575 +EAF I L TQL Y+ ++ G Sbjct: 119 RVLEAFVIILAFTQLLYVAMLHGG 142
>Os10g0464300:Os10g0464300 | Length = 184 Score = 50.4 bits (119), Expect = 1e-06 Identities = 48/168 (28%), Positives = 70/168 (41%), Gaps = 18/168 (10%) Frame = +3 Query: 135 VALFLLMLNFCMYLILAIIGGWAVNFAI-----DQGFIIGPELRLPAHFHPIFFPIGNFA 299 VA LL+LN MY+ L GWA+N +I D G G + + P + FA Sbjct: 11 VAGSLLLLNLLMYVFLLGFAGWALNSSIKNAGADVGVGWGEQ-----PWSPYYRQSAWFA 65 Query: 300 TGF-FVVFSLLAGVVGLASCIVGFSH----VRFWNYXXXXXXXXXXXXXXXXTVLAMGLA 464 + F F+ LAG +G+A+ H W T LA G+A Sbjct: 66 SRFHLATFAALAGALGVAAKASAAYHGGRSGASWRPQGLAAAASLGTAAWAATALAFGVA 125 Query: 465 CQEI--------SFDRRNAKLGTMEAFTIALTVTQLFYILVIKAGGHG 584 C+EI + R ++ +E T+ L TQL Y+L++ A G Sbjct: 126 CREIHDAAAAGPAGAARGWRMRALEGLTVTLAFTQLLYVLLLHAAVAG 173
>Os11g0689400:Os11g0689400 | Length = 2841 Score = 36.6 bits (83), Expect = 0.022 Identities = 34/98 (34%), Positives = 41/98 (41%), Gaps = 4/98 (4%) Frame = +2 Query: 386 ELQQPAVRGVARSARLGAYRLSH--GAGLPGDQF*PKKCEAGDHGGVHDSPNSDAALLHP 559 ELQ+ A RG A + R A +S G G G++F G +GG+ D P P Sbjct: 856 ELQEMAARGAAGAPRNQAGGMSRWDGPGGGGNRFESAVGIPGSYGGIRDGPGGFGGRDGP 915 Query: 560 RDQGGRSRPRPGRTAQRLGP--LIGSEDTYASEGAEPP 667 GGR PG R GP IG E G E P Sbjct: 916 GGFGGRD--GPGGFGGRDGPGGFIGREGPGGFGGREGP 951
>AK068228:Os02g0726700 | Length = 344 Score = 32.0 bits (71), Expect = 0.54 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Frame = +2 Query: 431 LGAYRLSHGAGLPGDQF*PKKCEAGDHGGVHDSPNSDAALLH------PRDQGGRSRPRP 592 +G + + H +G P + EAG HGGV S + A LH + GGRS R Sbjct: 49 VGTFSIRHASGTPSRE------EAGSHGGVRRSAFAFAPALHGARMENAHETGGRSGSRA 102 Query: 593 GR 598 R Sbjct: 103 HR 104
>AK064674:Os02g0726700 | Length = 137 Score = 32.0 bits (71), Expect = 0.54 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 6/62 (9%) Frame = +2 Query: 431 LGAYRLSHGAGLPGDQF*PKKCEAGDHGGVHDSPNSDAALLH------PRDQGGRSRPRP 592 +G + + H +G P + EAG HGGV S + A LH + GGRS R Sbjct: 59 VGTFSIRHASGTPSRE------EAGSHGGVRRSAFAFAPALHGARMENAHETGGRSGSRA 112 Query: 593 GR 598 R Sbjct: 113 HR 114
>AK070982:Os02g0810900 | Length = 331 Score = 31.6 bits (70), Expect = 0.71 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Frame = -2 Query: 174 GTCRS*ASAGRGPRASGY---PPFLPSVRTCAKCHHSVTRP 61 G C S +S+ P A+G+ PPF S+ C+ HH + P Sbjct: 206 GGCYSNSSSSHDPAAAGHHSPPPFPASLAACSSSHHYSSHP 246
>AK060976:Os02g0810900 | Length = 331 Score = 31.6 bits (70), Expect = 0.71 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Frame = -2 Query: 174 GTCRS*ASAGRGPRASGY---PPFLPSVRTCAKCHHSVTRP 61 G C S +S+ P A+G+ PPF S+ C+ HH + P Sbjct: 206 GGCYSNSSSSHDPAAAGHHSPPPFPASLAACSSSHHYSSHP 246
>AK072824:Os04g0606800 | Length = 278 Score = 31.2 bits (69), Expect = 0.93 Identities = 26/97 (26%), Positives = 42/97 (43%) Frame = -1 Query: 358 MQEANPTTPASSENTTKKPVAKFPIGKNIGWKCAGRRSSGPMMKPWSMAKLTAHPPMMAR 179 M EA+ T + + ++T PVA G+ +G+ G + P+M P +P +M Sbjct: 1 MAEADAQTQSRAHSSTAAPVAGETAGEPVGFPQNGAINGAPLMFP------VMYPMLMTG 54 Query: 178 MRYMQKLSISRKRATGFRLSAISAERTYLRKMPPLGY 68 M Q L +A G + AI + + PL Y Sbjct: 55 MHPQQSLD---DQAQGPGIYAIQQNQFMGSTLMPLTY 88
>Os02g0203000:Os02g0203000 | Length = 360 Score = 29.6 bits (65), Expect = 2.7 Identities = 26/99 (26%), Positives = 43/99 (43%) Frame = +2 Query: 389 LQQPAVRGVARSARLGAYRLSHGAGLPGDQF*PKKCEAGDHGGVHDSPNSDAALLHPRDQ 568 L PA R ++ +L ++ + H + + + EA GGVH +P+S A + ++Q Sbjct: 13 LPSPAARAPVKAKKL-SWSMLHASSKDERRGQSGEAEAEASGGVHANPSSPARM---QEQ 68 Query: 569 GGRSRPRPGRTAQRLGPLIGSEDTYASEGAEPPEKVYLL 685 SRP ++ G EG E P + LL Sbjct: 69 ATSSRP----SSSERSSSSGGHHMEIKEGKEAPLRSLLL 103
>Os12g0608700:Os12g0608700 | Length = 656 Score = 28.9 bits (63), Expect = 4.6 Identities = 20/70 (28%), Positives = 28/70 (40%) Frame = -1 Query: 265 KCAGRRSSGPMMKPWSMAKLTAHPPMMARMRYMQKLSISRKRATGFRLSAISAERTYLRK 86 + G G M + + AHP R Q +S+ R A L A T+L Sbjct: 565 RLTGEFDGGEMERVMVVGLWCAHPDRSVRPVIRQAISVLRGEAPPPSLPARMPVATFLPP 624 Query: 85 MPPLGYTTSL 56 + GYT+SL Sbjct: 625 IDAFGYTSSL 634
>Os02g0628600:Os02g0628600 | Length = 821 Score = 28.9 bits (63), Expect = 4.6 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = -1 Query: 463 ASPMAKTVSAQASRPSDAADCRLL*FQNRT*LNPTMQEANPTTPASSENTT 311 +SP A+ +S A +P DA L+ F R M + T+PA++ N++ Sbjct: 498 SSPPARALSMGAKKPDDAKPPGLMLFGQRILTERQMSLSGTTSPAATGNSS 548
>Os01g0580800:Os01g0580800 | Length = 780 Score = 28.5 bits (62), Expect = 6.0 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 3/89 (3%) Frame = -3 Query: 500 LRISSVKTDLLASQPHG*DGKRPGEQTERRRGLQAAVVPEPDVTESHDAGGQPD--DAGE 327 LRI S + L + HG ++ E + + D+ +AGG D E Sbjct: 151 LRILSSNEECLETVIHGASVGAGDDEPEIVARVVMPPAADDDMAAGANAGGGGGGGDRSE 210 Query: 326 QREHHEKAGGEVPDRKEYWVE-MRRETQL 243 ++E E+ EV KE W+ M RE +L Sbjct: 211 KKEREEEEDEEVERLKELWLSLMEREQRL 239
>Os07g0567000:Os07g0567000 | Length = 500 Score = 28.5 bits (62), Expect = 6.0 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = +2 Query: 74 EWWHFAQVRTLGRNGG*PEARGPLPADAQLLHVP 175 EWW F +R G P AR PADA L +VP Sbjct: 154 EWWLFKDLRRRGPLDR-PVARVDDPADADLFYVP 186
>AK111019:Os01g0166200 | Length = 124 Score = 28.5 bits (62), Expect = 6.0 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 7/60 (11%) Frame = -1 Query: 250 RSSGPMMKPWSMAKLTAHP-------PMMARMRYMQKLSISRKRATGFRLSAISAERTYL 92 R SGP + PW + +HP P R R + ++ R+R G ++++ E +++ Sbjct: 13 RRSGPQIWPWRRRRPASHPAPRRQALPARRRRRRAEAVARPRRRRRGGGRASVACEPSWV 72
>AK101356:Os07g0679700 | Length = 949 Score = 28.1 bits (61), Expect = 7.8 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 12/92 (13%) Frame = -3 Query: 521 ERLHGPQLRISSVKTDLLASQPHG*DGKR------PGEQTERRRGLQAAVVPEPDVTESH 360 E HG Q R+S V +A++P K+ GEQ AA VP+P + ES Sbjct: 848 EERHGGQPRVSMVSLLEVANRPLENYMKQNGLTSLAGEQGSSSTCTGAATVPQPALVESE 907 Query: 359 DAGGQPDD----AGEQREHH--EKAGGEVPDR 282 + D EQ E ++AG PD+ Sbjct: 908 ERTSNNDGGRVATAEQPESMAVDEAGDNQPDK 939
>Os02g0166500:Os02g0166500 | Length = 210 Score = 28.1 bits (61), Expect = 7.8 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 8/43 (18%) Frame = +2 Query: 374 RPVLELQQPA--------VRGVARSARLGAYRLSHGAGLPGDQ 478 +P L + PA RGV RS R G RL G PGD+ Sbjct: 64 KPRLRVHPPASTPPRRCRARGVVRSPRSGGGRLRRGGAGPGDK 106
>AK121639:Os03g0669800 | Length = 932 Score = 28.1 bits (61), Expect = 7.8 Identities = 15/77 (19%), Positives = 38/77 (49%) Frame = -1 Query: 334 PASSENTTKKPVAKFPIGKNIGWKCAGRRSSGPMMKPWSMAKLTAHPPMMARMRYMQKLS 155 P ++N + P A + KN+GW+ ++ + P + +++ + P ++ + ++L Sbjct: 632 PEVTDNDMQDP-ALLSVLKNMGWEDEDADTASIINMPSNSSRIVSQKPTKSKGQIQKELL 690 Query: 154 ISRKRATGFRLSAISAE 104 +++A FR + E Sbjct: 691 AIKRKALAFRREGKNTE 707
>AK101670:Os03g0602300 | Length = 469 Score = 28.1 bits (61), Expect = 7.8 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -1 Query: 529 AIVNASMVPSF-AFLRSKLISWQASPMAKTVSAQA 428 A++ +S++P AF+RS L +W +S + V QA Sbjct: 137 AMIRSSLLPKIDAFMRSHLAAWSSSSSSAVVDIQA 171
>AK072295:Os03g0602300 | Length = 469 Score = 28.1 bits (61), Expect = 7.8 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -1 Query: 529 AIVNASMVPSF-AFLRSKLISWQASPMAKTVSAQA 428 A++ +S++P AF+RS L +W +S + V QA Sbjct: 137 AMIRSSLLPKIDAFMRSHLAAWSSSSSSAVVDIQA 171
>AB084385:Os03g0602300 | Length = 469 Score = 28.1 bits (61), Expect = 7.8 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -1 Query: 529 AIVNASMVPSF-AFLRSKLISWQASPMAKTVSAQA 428 A++ +S++P AF+RS L +W +S + V QA Sbjct: 137 AMIRSSLLPKIDAFMRSHLAAWSSSSSSAVVDIQA 171 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,395,173 Number of extensions: 579015 Number of successful extensions: 2091 Number of sequences better than 10.0: 25 Number of HSP's gapped: 2076 Number of HSP's successfully gapped: 25 Length of query: 277 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 178 Effective length of database: 11,435,796 Effective search space: 2035571688 Effective search space used: 2035571688 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
