ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf53b22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK065132:Os01g0558300 325 4e-89
2Os03g0161100:Os03g0161100 28 9.7

>AK065132:Os01g0558300 |
          Length = 247
 Score =  325 bits (833), Expect = 4e-89
 Identities = 164/247 (66%), Positives = 187/247 (75%)
 Frame = +1

Query: 169 MADYXXXXXXXXXXXXXXXXDDIKEIDPSESGIDTNSRCFEILLSPQDDDFDEAAHVPVQ 348
           MADY                DDIKEIDPSESG+ T +RCF+I+LSPQDDDFDE+A+VPVQ
Sbjct: 1   MADYEQEQEMEVEALQAILMDDIKEIDPSESGLSTTARCFQIVLSPQDDDFDESAYVPVQ 60

Query: 349 MALVFAHTEKYPDEPPLVNIKSVRGIKPDDLTSLKEKLDQEATENLGMAMVYTLLDSAKE 528
           +AL+FAHTEKYPDEPPL+N+KSVRG+K +DL SLKEKL+QEATENLGMAMVYTL+ SA++
Sbjct: 61  LALIFAHTEKYPDEPPLLNVKSVRGMKSEDLASLKEKLEQEATENLGMAMVYTLVTSAQD 120

Query: 529 WLTEKYGQNAGXXXXXXXXXXXXXVIIPHGEAVTVESFMAWRERFEAELALQRAKLMPES 708
           WL+EKYGQNAG             VI+PHGEAVTVESF+AWR+RFEAELALQRAKLMPES
Sbjct: 121 WLSEKYGQNAGDGESEENEAEEEEVIVPHGEAVTVESFLAWRDRFEAELALQRAKLMPES 180

Query: 709 ALTAPKEKKLSGRQYFESGRHITKGAGTVAXXXXXXXXXXXXXXXXXXXXXXMLEHFLAE 888
           ALTAPKEKKLSGRQYFESGRH  KGA T A                      MLEH+LAE
Sbjct: 181 ALTAPKEKKLSGRQYFESGRHTMKGASTTADEEEEEEEDIDFDEDFDDDEEDMLEHYLAE 240

Query: 889 QTGKSSA 909
           Q+GKS+A
Sbjct: 241 QSGKSAA 247



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>Os03g0161100:Os03g0161100 |
          Length = 2567

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = -2

Query: 1131 LHRCSSMLNASTLISERALVPQLFRYLCSYVPQGN 1027
            L RC S+L+   + ++R +VP L++  CS+VP  +
Sbjct: 167  LPRCCSILSTKDIETDRHIVP-LWQLTCSFVPMAS 200


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 29,329,004
Number of extensions: 594334
Number of successful extensions: 1465
Number of sequences better than 10.0: 2
Number of HSP's gapped: 1463
Number of HSP's successfully gapped: 2
Length of query: 396
Length of database: 15,399,855
Length adjustment: 103
Effective length of query: 293
Effective length of database: 11,275,632
Effective search space: 3303760176
Effective search space used: 3303760176
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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