| Clone Name | FLbaf53a23 |
|---|---|
| Clone Library Name | barley_pub |
>Q9LFU5:TRM1_ARATH Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase -| Arabidopsis thaliana (Mouse-ear cress) Length = 586 Score = 773 bits (1997), Expect = 0.0 Identities = 385/595 (64%), Positives = 459/595 (77%), Gaps = 4/595 (0%) Frame = +1 Query: 199 LEDKLKGFEIKKEGEAEILMLNSNAVFFNPVQVHNRDMSIAVLRTFVAKRKEEHEELMNK 378 +E L + + KEGEAE+LM N VFFN QV+NRDMSIAVLR F+ KRK+EHE +++K Sbjct: 1 METDLNDYTVIKEGEAEVLMHKKNQVFFNKAQVNNRDMSIAVLRAFIIKRKQEHEAMLSK 60 Query: 379 RNNKSHKKGNQIETHVVNGDTALTQHDETDVVHEKEPNQATNEIE----DPSKEETKTPS 546 R S K VV D + T +ET + + + E E D KE KT Sbjct: 61 RARSSGK--------VVEKDVSETSKEETPTENGDDNGKTNGEHEVTTQDGPKEAAKTAY 112 Query: 547 GKVTRELKPPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASV 726 RELKPP VLEAL+ASGLR+LRYAREV+G+G+VVALDND ASVEAC+RNIKFNG Sbjct: 113 ESARRELKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDPASVEACQRNIKFNGLMS 172 Query: 727 ISKVEAHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVL 906 SKVE+HL DARV+ML+HPK+FDVVDLDPYG+PS+FLDSAVQ+VADGGLLMCTATD+AVL Sbjct: 173 TSKVESHLTDARVHMLSHPKDFDVVDLDPYGAPSIFLDSAVQSVADGGLLMCTATDMAVL 232 Query: 907 CGTNGEVCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVF 1086 CG NGEVCYSKYGSYP++GKYCHEMALRILLASIESHANRYKRYIVPVLSV MDFYVRVF Sbjct: 233 CGANGEVCYSKYGSYPLKGKYCHEMALRILLASIESHANRYKRYIVPVLSVQMDFYVRVF 292 Query: 1087 VRVFTSASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSD 1266 VRV+TSAS +KN PLKLSYVYQC+GCDSFHLQS+GR++ KNNSV+Y PG+GPVVPQ+C+ Sbjct: 293 VRVYTSASAMKNTPLKLSYVYQCIGCDSFHLQSVGRSLPKNNSVRYLPGVGPVVPQDCTH 352 Query: 1267 CGKKFNVGGPIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFF 1446 CGKK+N+GGPI+SAPIHDQ+WV S L V+ MKDRYPAY++I + EL D+PLF Sbjct: 353 CGKKYNMGGPIWSAPIHDQEWVNSILNGVKSMKDRYPAYDRICA-------ELPDVPLFL 405 Query: 1447 SLHNISGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIMRCWVKNH 1626 SLH++S T+KCTSPSA +FRSAVINA Y++S SH NPLG+K+DAP ++IWDIMRCWVKNH Sbjct: 406 SLHSLSATLKCTSPSAALFRSAVINAKYRVSGSHVNPLGIKTDAPMEIIWDIMRCWVKNH 465 Query: 1627 PIKEQPRDSAGTAILSKSPQLEANFSRAVAALSKAQMKKVNRFLPNPESHWGPKVRAGRR 1806 PIK Q + G+ ILSK P +A+FSR V +LSKAQ KKV RFLPNPE HWGPK+RAGR Sbjct: 466 PIKPQSPEHPGSVILSKEPSHQADFSRHVGSLSKAQAKKVARFLPNPEKHWGPKIRAGRT 525 Query: 1807 ITNKHISLLGAEATNEAISRQDGNGAVTDKPGSDTGATVTDEENEPSTKRQKTDD 1971 IT+KH+SLLG EA N ++ ++ + E EP KRQKT + Sbjct: 526 ITSKHVSLLGHEAVNGHLNNNHKEAGDEEEEEEEEEPEEDIIEGEPELKRQKTTE 580
>Q9SRU7:TRM2_ARATH Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase -| Arabidopsis thaliana (Mouse-ear cress) Length = 599 Score = 754 bits (1948), Expect = 0.0 Identities = 383/605 (63%), Positives = 457/605 (75%), Gaps = 16/605 (2%) Frame = +1 Query: 199 LEDKLKGFEIKKEGEAEILMLNSNAVFFNPVQVHNRDMSIAVLRTFVAKRKEEHEELMNK 378 +E L + + KEGEAEILM N VFFN QV+NRDMSIAVLR F++KRK+EHE +K Sbjct: 1 METDLNDYTVIKEGEAEILMHKKNQVFFNKAQVNNRDMSIAVLREFLSKRKQEHEAKSSK 60 Query: 379 RNNKSHKKGNQIETHVVNGDTALTQHDETDVVHEKEPNQATNEIEDP------SKEETKT 540 R + K V+ D + +ET E N +E+ SK+ KT Sbjct: 61 RTRPASK--------VIEKDASEASKEETP--SENGMNNGDHEVASEDGPSSVSKDPAKT 110 Query: 541 PSGKVTRELKPPIVLE----------ALAASGLRSLRYAREVDGLGKVVALDNDKASVEA 690 RE KPP VLE AL+ASGLR+LRYARE++G+G+VVALDND ASVEA Sbjct: 111 TERFAPREPKPPKVLEINFVCILIFQALSASGLRALRYAREIEGIGQVVALDNDLASVEA 170 Query: 691 CKRNIKFNGASVISKVEAHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGG 870 C+RNIKFNG+ ISKVE+H DARV+MLTHPKEFDVVDLDPYGSPS+FLDSA+Q+V DGG Sbjct: 171 CQRNIKFNGSVAISKVESHHTDARVHMLTHPKEFDVVDLDPYGSPSIFLDSAIQSVTDGG 230 Query: 871 LLMCTATDLAVLCGTNGEVCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPV 1050 LLMCTATD+AVLCG NGEVCYSKYGSYP+R KYCHEMALRILLASIESHANRYKRYIVPV Sbjct: 231 LLMCTATDMAVLCGGNGEVCYSKYGSYPLRAKYCHEMALRILLASIESHANRYKRYIVPV 290 Query: 1051 LSVFMDFYVRVFVRVFTSASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAP 1230 LSV MDFYVRVFVRV+TSAS +KN PLKLSYVYQC+GCDSFHLQ +GR++ KNNSV+Y P Sbjct: 291 LSVQMDFYVRVFVRVYTSASAMKNTPLKLSYVYQCIGCDSFHLQPVGRSLPKNNSVRYLP 350 Query: 1231 GIGPVVPQECSDCGKKFNVGGPIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTT 1410 IGPVV Q+C+ CGKK+N+GGPI+SAP+HD +WV S L V+ MKDRYPAY++I++VLTT Sbjct: 351 AIGPVVKQDCNHCGKKYNMGGPIWSAPMHDPEWVTSILNSVKSMKDRYPAYDRISAVLTT 410 Query: 1411 VSEELHDIPLFFSLHNISGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDV 1590 VSEEL D+PLF SLHN+ T+KC SPSA MFRSAVINA Y+IS +H NPLG+K+DAP +V Sbjct: 411 VSEELLDVPLFLSLHNLCATLKCISPSAAMFRSAVINANYRISGTHVNPLGMKTDAPMEV 470 Query: 1591 IWDIMRCWVKNHPIKEQPRDSAGTAILSKSPQLEANFSRAVAALSKAQMKKVNRFLPNPE 1770 IWDIMRCWVKNHPIK Q + G+ ILSK P E +FSR + +LSKAQ KKV RFLPNPE Sbjct: 471 IWDIMRCWVKNHPIKAQSPEQPGSVILSKEPSHEVDFSRHIGSLSKAQAKKVARFLPNPE 530 Query: 1771 SHWGPKVRAGRRITNKHISLLGAEATNEAISRQDGNGAVTDKPGSDTGATVTDEENEPST 1950 HWGPK+RAGR+IT+KH+SL+G EA N +S+ D+ + +++ Sbjct: 531 KHWGPKLRAGRQITSKHVSLIGHEAVNGHLSQHHEELKEEDEEAEPE----DNVQDKVDP 586 Query: 1951 KRQKT 1965 KRQKT Sbjct: 587 KRQKT 591
>Q3TX08:TRM1_MOUSE N(2),N(2)-dimethylguanosine tRNA methyltransferase - Mus musculus| (Mouse) Length = 663 Score = 409 bits (1052), Expect = e-113 Identities = 227/530 (42%), Positives = 331/530 (62%), Gaps = 9/530 (1%) Frame = +1 Query: 235 EGEAEILMLNSNAVFFNPVQVHNRDMSIAVLRTFVAKRKEEHEELMNKRNNKSH--KKGN 408 EG A+I+ ++N VF+NPVQ NRD++ AV+ F + H KG Sbjct: 60 EGAAKIVFPSANEVFYNPVQEFNRDLTCAVITEFA----------------RIHLGAKGI 103 Query: 409 QIETHVVNGDTALTQHDETDVVHEKEPNQATNEIEDPSKEETKTPSGKVTRE-LKPPIVL 585 QI+ V G+ ++ D+ ++E NE P G++ E L+ VL Sbjct: 104 QIK---VPGEKD-SEKIAVDLSDQEEETAGKNENLAPGDWPRTAAVGEICEEGLR---VL 156 Query: 586 EALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHLADARV 765 E LAASGLRS+R+A EV GL VVA D +VE RN++ NG + + V+ + ADAR+ Sbjct: 157 EGLAASGLRSIRFALEVPGLQSVVANDASARAVELMHRNVELNGVAHL--VQPNQADARM 214 Query: 766 YMLTH---PKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGEVCYS 936 M H P+ FDV+DLDPYGSP+ FLD+AVQAV+DGGLL T TD+AVL G +GE CYS Sbjct: 215 LMYQHQKAPERFDVIDLDPYGSPAPFLDAAVQAVSDGGLLCVTCTDMAVLAGNSGETCYS 274 Query: 937 KYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSASEI 1116 KYG+ ++ + CHEMALRI+L S++ HAN Y+RYIVP+LS+ DFY+RVFVRVFT +++ Sbjct: 275 KYGAMALKSRACHEMALRIVLHSLDLHANCYQRYIVPLLSISADFYIRVFVRVFTGQAKV 334 Query: 1117 KNAPLKLSYVYQCVGCDSFHLQSLGR-TVTKNNSVKYAPGIGPVVPQECSDCGKKFNVGG 1293 K++ K + V+QCVGC +F+LQ LG+ + +K++ GP V EC CG++ +GG Sbjct: 335 KSSASKQALVFQCVGCGAFYLQRLGKASGDPGGRIKFSAACGPPVTPECEHCGQRHQLGG 394 Query: 1294 PIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNISGTV 1473 P+++ PIHD D+V L V R+ +I VL+ V+EEL D+PL+++L +S T+ Sbjct: 395 PMWAEPIHDLDFVGRVLDAVTTNPGRFHTSMRIQGVLSVVTEELPDVPLYYTLDQLSSTI 454 Query: 1474 KCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIMRCWVKNHPIKEQPRDS 1653 C +P + RSA+++AG+++S SH +K+DAP + +WDIMRCW K P+K + Sbjct: 455 HCNTPRLLQLRSALLHAGFRVSLSHACKNAVKTDAPPEALWDIMRCWEKECPVKRERLSE 514 Query: 1654 AGTA--ILSKSPQLEANFSRAVAALSKAQMKKVNRFLPNPESHWGPKVRA 1797 + A IL+ P+L+ANF+ A ++ + + RF NPE++WGP+ RA Sbjct: 515 SSPAFRILAVEPRLKANFNIREDANPSSRQRGLKRFQANPEANWGPRPRA 564
>Q9NXH9:TRM1_HUMAN N(2),N(2)-dimethylguanosine tRNA methyltransferase - Homo sapiens| (Human) Length = 659 Score = 399 bits (1025), Expect = e-110 Identities = 224/529 (42%), Positives = 326/529 (61%), Gaps = 8/529 (1%) Frame = +1 Query: 235 EGEAEILMLNSNAVFFNPVQVHNRDMSIAVLRTFVAKRKEEHEELMNKRNNKSHKKGNQI 414 EG A+I ++N VF+NPVQ NRD++ AV+ F + KG QI Sbjct: 59 EGAAKIAFPSANEVFYNPVQEFNRDLTCAVITEFA--------------RIQLGAKGIQI 104 Query: 415 ETHVVNGDTALTQHDETDVVHEKEPNQATNEIED-PSKEETKTPS-GKVTRELKPPIVLE 588 + V G+ TQ D+ ++E E E+ S ++ +T + G++ E VLE Sbjct: 105 K---VPGEKD-TQKVVVDLSEQEEEKVELKESENLASGDQPRTAAVGEICEEGLH--VLE 158 Query: 589 ALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHLADARVY 768 LAASGLRS+R+A EV GL VVA D +V+ +RN++ N V V+ ADAR+ Sbjct: 159 GLAASGLRSIRFALEVPGLRSVVANDASTRAVDLIRRNVQLN--DVAHLVQPSQADARML 216 Query: 769 MLTHPK---EFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGEVCYSK 939 M H + FDV+DLDPYGSP+ FLD+AVQAV++GGLL T TD+AVL G +GE CYSK Sbjct: 217 MYQHQRVSERFDVIDLDPYGSPATFLDAAVQAVSEGGLLCVTCTDMAVLAGNSGETCYSK 276 Query: 940 YGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSASEIK 1119 YG+ ++ + CHEMALRI+L S++ AN Y+R++VP+LS+ DFYVRVFVRVFT +++K Sbjct: 277 YGAMALKSRACHEMALRIVLHSLDLRANCYQRFVVPLLSISADFYVRVFVRVFTGQAKVK 336 Query: 1120 NAPLKLSYVYQCVGCDSFHLQSLGR-TVTKNNSVKYAPGIGPVVPQECSDCGKKFNVGGP 1296 + K + V+QCVGC +FHLQ LG+ + + K++ GP V EC CG++ +GGP Sbjct: 337 ASASKQALVFQCVGCGAFHLQRLGKASGVPSGRAKFSAACGPPVTPECEHCGQRHQLGGP 396 Query: 1297 IYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNISGTVK 1476 +++ PIHD D+V L V R+ +I VL+ ++EEL D+PL+++L +S T+ Sbjct: 397 MWAEPIHDLDFVGRVLEAVSANPGRFHTSERIRGVLSVITEELPDVPLYYTLDQLSSTIH 456 Query: 1477 CTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIMRCWVKNHPIKEQPRDSA 1656 C +PS + RSA+++A +++S SH +K+DAP +WDIMRCW K P+K + Sbjct: 457 CNTPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASALWDIMRCWEKECPVKRERLSET 516 Query: 1657 GTA--ILSKSPQLEANFSRAVAALSKAQMKKVNRFLPNPESHWGPKVRA 1797 A ILS P+L+ANF+ A ++ + + RF NPE++WGP+ RA Sbjct: 517 SPAFRILSVEPRLQANFTIREDANPSSRQRGLKRFQANPEANWGPRPRA 565
>Q9VK89:TRM1_DROME Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase -| Drosophila melanogaster (Fruit fly) Length = 578 Score = 362 bits (930), Expect = 3e-99 Identities = 216/534 (40%), Positives = 299/534 (55%), Gaps = 12/534 (2%) Frame = +1 Query: 232 KEGEAEILMLNSNAVFFNPVQVHNRDMSIAVLRTFVAKRKEEHEELMNKRNNKSHKKGNQ 411 +E AEI+ + VF+NPVQ NRD+SIA L + + +E E K+ K Sbjct: 21 RERNAEIV--SGGNVFYNPVQEFNRDLSIAALNVYRQRLTKERSEKALKKQRKK------ 72 Query: 412 IETHVVNGDTALTQHDETDVVHEKEPNQATNEIEDPSKEETKTPSGKVTRELKPPIVLEA 591 V E+E + T EDP E T R +LEA Sbjct: 73 --------------------VKEQEDEKTTPVPEDPPVYEAGTRYEDGLR------ILEA 106 Query: 592 LAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHLADARVYM 771 LAA+GLRS+RYA+E+ G+ ++VA D + +V + NI+ N + + A +Y+ Sbjct: 107 LAATGLRSIRYAQEIAGVRQIVANDLSRQAVASINTNIRHNKVEELIEPSHSDAMTLMYL 166 Query: 772 LTHP-KEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGEVCYSKYGS 948 T P K FD VDLDPYG P+ FLD A+Q + DGGLL+ TATD+AVL G E CY KYGS Sbjct: 167 STQPEKRFDAVDLDPYGCPNRFLDGAMQCLVDGGLLLVTATDMAVLAGNAPEACYVKYGS 226 Query: 949 YPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSASEIKNAP 1128 P+R K CHEMALRILL IESHANRY +YI P+LS+ DFY+R+FVRV+ ++ K + Sbjct: 227 VPLRMKCCHEMALRILLHCIESHANRYGKYIEPLLSISADFYIRIFVRVYVGQAQCKLSM 286 Query: 1129 LKLSYVYQCVGCDSFHLQSLGRTVTKNN-------SVKYAPGIGPVVPQECSDCGKKFNV 1287 K S++YQC GC++F LQ LG +TK N +K+ GP V +C CG + ++ Sbjct: 287 SKQSWIYQCTGCETFTLQPLG--ITKPNPTAGNPQQLKFGIPTGPAVNSQCEHCGHRHHL 344 Query: 1288 GGPIYSAPIHDQDWVLSTLTDVRPMK-DRYPAYNKITSVLTTVSEELHDIPLFFSLHNIS 1464 GGPI+SAPIH+ ++V LT V+ +I VL+ V EEL D+PL+++ + Sbjct: 345 GGPIWSAPIHNPEFVQDLLTAVQETTLQSLGTQRRIVGVLSMVQEELQDVPLYYTPDKLC 404 Query: 1465 GTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIMRCWVKNHPIKEQP 1644 +K + FRSA+++AGY++S SH + LK++AP V+WDI+R W K HP+ + Sbjct: 405 CVLKLEIVPMLKFRSAILHAGYRVSYSHASKNSLKTNAPPAVLWDILRSWSKRHPVNPER 464 Query: 1645 R--DSAGTAILSKSPQLEANFSRA-VAALSKAQMKKVNRFLPNPESHWGPKVRA 1797 S AILSK F A K++ ++RF NP HWGP RA Sbjct: 465 MIPGSPLAAILSKECTAVYEFDELHPEANPKSRKSALSRFQENPTPHWGPGTRA 518
>Q9P804:TRM1_SCHPO N(2),N(2)-dimethylguanosine tRNA methyltransferase -| Schizosaccharomyces pombe (Fission yeast) Length = 548 Score = 325 bits (833), Expect = 5e-88 Identities = 192/532 (36%), Positives = 294/532 (55%), Gaps = 8/532 (1%) Frame = +1 Query: 235 EGEAEILMLNSNAVFFNPVQVHNRDMSIAVLRTFVAKRKEEHEELMNKRNNKSHKKGNQI 414 EG A I N N VF+NPVQ NRD+S+ +R + R + K KSH + + Sbjct: 34 EGSAIIPFSNPNEVFYNPVQQFNRDLSVTAIRAWSETRSK-------KIVAKSHHRHQLL 86 Query: 415 ETHVVNGDTALTQHDETDVVHEKEPNQATNEIEDPSKEETKTPSGKVTRELKPPIVLEAL 594 + + LT+ D T H+ E N E+T + S + +LEAL Sbjct: 87 DQNSELSQENLTKCDTT---HDFEKN---------CSEKTDSTSAD---NIAGFTILEAL 131 Query: 595 AASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHLADARVYML 774 +A+GLRS+RYA+E+ + +++A D + +V+ ++N+ +N S I V + DA M Sbjct: 132 SATGLRSIRYAKELPNVKRILANDLLENAVKTIEKNVNYNNVSDI--VIPNKGDANAVMH 189 Query: 775 THPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTN-GEVCYSKYGSY 951 + +DV+DLDPYGS + FLD+AVQ+V+ GLL T TD AVL G E C+S YG Sbjct: 190 MNKFHYDVIDLDPYGSAAPFLDAAVQSVSKDGLLCITCTDSAVLAGNAYPEKCFSNYGGS 249 Query: 952 PVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSASEIKNAPL 1131 +R +CHE A+R LL +I + A +Y R I P+LS+ +DFY RVFV++ +KN Sbjct: 250 SLRSNFCHEQAVRHLLYAIAASAAKYGRAIKPLLSLSIDFYFRVFVQIKAKPVLVKNLQS 309 Query: 1132 KLSYVYQCVGCDSFHLQSLGRTVTKN--NSVKYAPGIGPVVPQECSDCGKKFNVGGPIYS 1305 + +Y C GC SF Q LG+T + K++ GP V C CG +VGGP++ Sbjct: 310 QSLLIYHCSGCGSFAEQPLGKTSPGRLPGTTKFSNASGPPVSANCEHCGYVHHVGGPLWG 369 Query: 1306 APIHDQDWVL---STLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNISGTVK 1476 P+HD +++ + D+ P + Y +I +L EEL D+P +F L I ++ Sbjct: 370 GPLHDAEFLKKMRAIAEDLDP--EVYGTKRRILGMLALADEELPDVPFYFVLSQICSVLR 427 Query: 1477 CTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIMRCWVKNHPIKEQ--PRD 1650 SP +F SA++NAGY++S SH +K++APW +WD++R W+K+HP+K + + Sbjct: 428 SQSPPQNIFVSALLNAGYRVSGSHAKSNAIKTNAPWSFVWDVLRSWIKDHPVKLENISKT 487 Query: 1651 SAGTAILSKSPQLEANFSRAVAALSKAQMKKVNRFLPNPESHWGPKVRAGRR 1806 SAG AIL K+P E +F+ + ++ + R+ NP +WGPK + G+R Sbjct: 488 SAGAAILEKTPTAEVDFTFRPDSEFASKKEGYTRYQMNPTENWGPKSKPGKR 539
>Q23270:TRM1_CAEEL N(2),N(2)-dimethylguanosine tRNA methyltransferase - Caenorhabditis| elegans Length = 526 Score = 320 bits (820), Expect = 2e-86 Identities = 206/546 (37%), Positives = 301/546 (55%), Gaps = 14/546 (2%) Frame = +1 Query: 202 EDKLKGFEIKKEGEAEILMLNSNAVFFNPVQVHNRDMSIAVLRTFVAKRKEEHEELMNKR 381 EDK + + +EG+A++ VF+NPVQ NRD+++ VLR F A ++ EE Sbjct: 16 EDK-EEVTVIQEGQAKVGF--HGPVFYNPVQEFNRDLTVTVLRQFSADHQKWAEEQ---- 68 Query: 382 NNKSHKKGNQIETHVVNGDTALTQHDETDVVHEKEPNQATNEIEDPSKEETKTPSGKVTR 561 Q++T E+EP + N++ GK+ Sbjct: 69 --------KQLKT-------------------EEEPPKKKNKL-------AINEDGKIR- 93 Query: 562 ELKPPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVE 741 +L+AL+ASGLR+LR+++EV +G ++A D +V + + N+K NG I VE Sbjct: 94 ------ILDALSASGLRALRFSKEVPNVGFIMANDFSDNAVASIQENVKLNGVEDI--VE 145 Query: 742 AHLADARVYMLTH---PKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCG 912 AH DA + M+ H K F VDLDPYG+ S FLDSAVQ VAD G+LM T TD+AVLCG Sbjct: 146 AHFGDAVMTMMEHRGIDKRFHAVDLDPYGTASTFLDSAVQCVADRGILMVTCTDMAVLCG 205 Query: 913 TNGEVCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVR 1092 E CY+KY + R K CHE+ LRILL +I+S ANRY RYI P++S+ +DFYVRVFVR Sbjct: 206 NTPEACYNKYDAVTTRMKCCHEVGLRILLRAIDSAANRYTRYIEPLVSISVDFYVRVFVR 265 Query: 1093 VFTSASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYA-PGI-----GPVVPQ 1254 V T A + K + K+ V C GC S L + N KY+ P + GP Sbjct: 266 VHTGAFQAKQSGTKVGTVLVCSGCHSMEPLVLLKRGEGNQQSKYSIPTVRHSISGP--GN 323 Query: 1255 ECSDCGKKFNVGGPIYSAPIHDQDWVLSTLTDVR--PMKDRYPAYNKITSVLTTVSEELH 1428 C C + GPIY APIH + +V S L ++ P +R + ++ VLT V+EEL Sbjct: 324 RCIHCLLPLHQIGPIYLAPIHSKPFVTSLLERLKSTPEAERLGTHGRLQGVLTMVNEELD 383 Query: 1429 DIPLFFSLHNISGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIMR 1608 D+ L++ + ++ VK + P + RSA++NAG+++S SHCNP +K++AP ++WDI R Sbjct: 384 DV-LYYEHNQMANVVKVSVPKSQSVRSAILNAGFKVSGSHCNPRAIKTNAPMHLLWDIYR 442 Query: 1609 CWVKNHPIKEQPR---DSAGTAILSKSPQLEANFSRAVAALSKAQMKKVNRFLPNPESHW 1779 K+ + + R +SAG IL + NF+ A+ +A+ + + RF N +W Sbjct: 443 QVAKDTSVDREKRLAKESAGYHILGQPITNTVNFTLHPGAIEQAKKENLVRFQCNKGKNW 502 Query: 1780 GPKVRA 1797 GP+ +A Sbjct: 503 GPRQKA 508
>P15565:TRM1_YEAST N(2),N(2)-dimethylguanosine tRNA methyltransferase, mitochondrial| precursor - Saccharomyces cerevisiae (Baker's yeast) Length = 570 Score = 290 bits (743), Expect = 1e-77 Identities = 194/574 (33%), Positives = 301/574 (52%), Gaps = 30/574 (5%) Frame = +1 Query: 163 SVVGFGFVDMGDLEDKLKGFEIKKEGEAEILMLNSNAVFFNPVQVHNRDMSIAVLRTFVA 342 S + F G ++ F I KEG+AEIL VF+NP+Q NRD+S+ ++ + Sbjct: 23 SKIKANFTAYGAPRINIEDFNIVKEGKAEILFPKKETVFYNPIQQFNRDLSVTCIKAW-- 80 Query: 343 KRKEEHEELMNKRNNKSHKKGNQIETHVVNGDTALTQHDETDVVHEKEPNQATNEIEDPS 522 EE KRNNK KK ET N D++ Q E N NE Sbjct: 81 -DNLYGEECGQKRNNKKSKKKRCAET---NDDSSKRQKMGNGSPKEAVGNSNRNE----- 131 Query: 523 KEETKTPSGKVTRELKPPI-VLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKR 699 P I +LEAL+A+GLR++RYA E+ + +V+A D +VE+ KR Sbjct: 132 ----------------PYINILEALSATGLRAIRYAHEIPHVREVIANDLLPEAVESIKR 175 Query: 700 NIKFNGASVISKVEAHLADARVYMLTHP---KEFDVVDLDPYGSPSVFLDSAVQAVADGG 870 N+++N SV + V+ +L DA V M + +F V+DLDPYG+ + F+D+A+Q++ +GG Sbjct: 176 NVEYN--SVENIVKPNLDDANVLMYRNKATNNKFHVIDLDPYGTVTPFVDAAIQSIEEGG 233 Query: 871 LLMCTATDLAVLCGTNG--EVCYSKYG-SYPVRGKYCHEMALRILLASIESHANRYKRYI 1041 L++ T TDL+VL G NG E C++ YG + V + HE ALR++L ++ A +YK+ + Sbjct: 234 LMLVTCTDLSVLAG-NGYPEKCFALYGGANMVSHESTHESALRLVLNLLKQTAAKYKKTV 292 Query: 1042 VPVLSVFMDFYVRVFVRVFTSASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVT---KNN 1212 P+LS+ +DFYVRVFV+V TS E+KN Y C C S+H Q LGR +NN Sbjct: 293 EPLLSLSIDFYVRVFVKVKTSPIEVKNVMSSTMTTYHCSRCGSYHNQPLGRISQREGRNN 352 Query: 1213 S--VKYAPGIGPVVPQECSDCGKKFNVGGPIYSAPIHDQDWVLSTL----TDVRPMKDRY 1374 KY+ GP V +C C +++ GP+Y+ P+H+++++ L + R D Y Sbjct: 353 KTFTKYSVAQGPPVDTKCKFCEGTYHLAGPMYAGPLHNKEFIEEVLRINKEEHRDQDDTY 412 Query: 1375 PAYNKITSVLTTVSEELHDIPLFFSLHNISGTVKCTSPSAVMFRSAVINAGYQISSSHCN 1554 +I +L+ EL D P +FS ++I+ +K P + + + G++ S +H Sbjct: 413 GTRKRIEGMLSLAKNELSDSPFYFSPNHIASVIKLQVPPLKKVVAGLGSLGFECSLTHAQ 472 Query: 1555 PLGLKSDAPWDVIWDIM-RCWVKNHPIKEQPRDSAGTAILSKSP---------QLEANFS 1704 P LK++APWD IW +M +C + + + ++ G ILS P + ++ S Sbjct: 473 PSSLKTNAPWDAIWYVMQKCDDEKKDLSKMNPNTTGYKILSAMPGWLSGTVKSEYDSKLS 532 Query: 1705 RA----VAALSKAQMKKVNRFLPNPESHWGPKVR 1794 A + K + K+ R+ NP +WGPK R Sbjct: 533 FAPNEQSGNIEKLRKLKIVRYQENPTKNWGPKAR 566
>Q2NI56:TRM1_METST N(2),N(2)-dimethylguanosine tRNA methyltransferase - Methanosphaera| stadtmanae (strain DSM 3091) Length = 390 Score = 179 bits (453), Expect = 5e-44 Identities = 108/393 (27%), Positives = 196/393 (49%), Gaps = 1/393 (0%) Frame = +1 Query: 412 IETHVVNGDTALTQHDETDVVHEKEPNQATNEIEDPSKEETKTPSGKVTRELKPPI-VLE 588 ++TH++ + + + V K P N + + +++ + + +E+ I + + Sbjct: 1 MDTHIIEEGLVKIEVPDFEKVSAKAP-VFYNPVMEMNRDISVAVINQYRKEVDHDISICD 59 Query: 589 ALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHLADARVY 768 A +G+R RY++E+ G+ KVV D + +VE K+N++ N IS VE DA + Sbjct: 60 AFGGTGIRGARYSKEIHGVEKVVVGDVNPLAVEISKKNMQLNN---ISNVEVQKNDANIL 116 Query: 769 MLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGEVCYSKYGS 948 + ++ FDVVD+DP+G+P++F S + GGL+ +ATD + LCGT + C KYG+ Sbjct: 117 LQSNKGLFDVVDIDPFGTPAMFTQSTAANIRPGGLICISATDTSALCGTYHDPCLRKYGA 176 Query: 949 YPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSASEIKNAP 1128 P++ +YCHE +RIL+A I + ++Y+ + S + Y+RV+ V + A Sbjct: 177 KPLKTEYCHENGIRILIAFISRNLAVNQKYLHVLFSHSTEHYMRVYAIVKRGGKKTNKAL 236 Query: 1129 LKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKFNVGGPIYSA 1308 + ++ C C L R T G P +P C +CG +++V GP++ Sbjct: 237 DNIGFIAHCPNC-------LHRETTY--------GFAPKIPHTCPECGGEYDVAGPLWLG 281 Query: 1309 PIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNISGTVKCTSP 1488 I D++++ +T+ V+ + + + S+ E F+ +H I +K +SP Sbjct: 282 KIWDKEFIYNTMELVKNL--NLNKKDDLMSLFEKCYMEADGPVTFYDIHKICKKLKISSP 339 Query: 1489 SAVMFRSAVINAGYQISSSHCNPLGLKSDAPWD 1587 + N GY IS +H G+++D P D Sbjct: 340 KINDVMDEIRNRGYFISRTHFKLTGMRTDMPLD 372
>O27258:TRM1_METTH N(2),N(2)-dimethylguanosine tRNA methyltransferase - Methanobacterium| thermoautotrophicum Length = 380 Score = 157 bits (397), Expect = 2e-37 Identities = 93/333 (27%), Positives = 162/333 (48%) Frame = +1 Query: 580 VLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHLADA 759 V + + SG+R++RY EV+G+ + A D + +VE K N N S E DA Sbjct: 55 VADTFSGSGIRAIRYLVEVEGVSEAFANDINPLAVECIKNNSVINSVSP----EVSREDA 110 Query: 760 RVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGEVCYSK 939 +++ ++ FDV+D+DP+G+P+ F+DSA + + LL TATD + LCGT + C K Sbjct: 111 SIFLRSNHGRFDVIDIDPFGTPAPFMDSAAASARNNSLLAVTATDTSSLCGTYIKPCLRK 170 Query: 940 YGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSASEIK 1119 Y S P++ +YCHE LRIL + RY++ +LS Y+R+++RV A Sbjct: 171 YSSRPLKTEYCHETGLRILAGFTAMNLARYRKAASVLLSHSSQHYMRLYIRVRRGARRAD 230 Query: 1120 NAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKFNVGGPI 1299 + + ++ C C H + + G P + +EC CG + +V GP+ Sbjct: 231 ESIRNIGFMLHCFRC--LHHE-------------HVNGFAP-LKRECPHCGAEMDVAGPL 274 Query: 1300 YSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNISGTVKC 1479 + I D ++ + +V + +L +E P F+ +H + + Sbjct: 275 WVGDIQDSKFIGEMIGEVE--NKELNTAGDVLKLLKGCLDEAGMPPGFYDIHEVCSKLGR 332 Query: 1480 TSPSAVMFRSAVINAGYQISSSHCNPLGLKSDA 1578 ++P + AG+++S +H P G+++DA Sbjct: 333 SAPPLRDVMDGLEAAGFRVSRTHIRPTGIRTDA 365
>O59493:TRM1_PYRHO N(2),N(2)-dimethylguanosine tRNA methyltransferase - Pyrococcus| horikoshii Length = 381 Score = 154 bits (389), Expect = 1e-36 Identities = 108/360 (30%), Positives = 172/360 (47%), Gaps = 12/360 (3%) Frame = +1 Query: 565 LKPPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNI--KFNGASVISKV 738 L P IVL+AL+A+G+R +R+A E +V D + + E KRN+ F+G SK Sbjct: 49 LNPKIVLDALSATGIRGIRFALETPA-EEVWLNDISEDAYELMKRNVMLNFDGELRESKG 107 Query: 739 EAHLADARVYMLTHP----------KEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTA 888 A L + ++ H + F +DLDP+GSP FLD+A+++ G+L TA Sbjct: 108 RAILKGEKTIVINHDDANRLMAERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA 167 Query: 889 TDLAVLCGTNGEVCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMD 1068 TD A LCG + C KY + P+RG+ CHE+ RIL+ I +A +Y I +L+ + D Sbjct: 168 TDGAPLCGAHPRACLRKYLAVPLRGELCHEVGTRILVGVIARYAAKYDLGIDVILAYYKD 227 Query: 1069 FYVRVFVRVFTSASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVV 1248 Y R FV++ A + KL Y+Y F L+ G P Sbjct: 228 HYFRAFVKLKDGARKGDETLEKLGYIYFDDKTGKFELEQ---------------GFLPTR 272 Query: 1249 PQECSDCGKKFNVGGPIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELH 1428 P N GP++ P+ D+ V + + + + +L + +EL Sbjct: 273 P----------NAYGPVWLGPLKDEKIVSKMVKEAESLS--LARKKQALKLLKMIDQEL- 319 Query: 1429 DIPLFFSLHNISGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIMR 1608 DIPLF+ H I +K + SA+ GY+ + +H +P G+K+ AP++V + ++ Sbjct: 320 DIPLFYDTHAIGRRLKIETKKVEEIISALREQGYEATRTHFSPTGIKTSAPYEVFIETIK 379
>Q5JIB3:TRM1_PYRKO N(2),N(2)-dimethylguanosine tRNA methyltransferase - Pyrococcus| kodakaraensis (Thermococcus kodakaraensis) Length = 376 Score = 153 bits (386), Expect = 3e-36 Identities = 103/360 (28%), Positives = 170/360 (47%), Gaps = 12/360 (3%) Frame = +1 Query: 565 LKPPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISK--- 735 L P VL+AL+A+G+R +RYA E +V D + + K+N N + + Sbjct: 46 LGPKRVLDALSATGIRGIRYALETPA-EEVWLNDISEEAYGLMKKNASLNIDGELYEEGD 104 Query: 736 ---------VEAHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTA 888 V + DA M + + FD +DLDP+GSP FLD+A+++V G+L TA Sbjct: 105 RSYLWGEKLVVINKGDANRLMAENFRYFDFLDLDPFGSPVEFLDTALRSVRRNGVLAVTA 164 Query: 889 TDLAVLCGTNGEVCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMD 1068 TD VLCG C KY + P+RG CHE LRIL+ ++ +A +Y + +L+ D Sbjct: 165 TDTGVLCGAYRNACLRKYLAEPIRGPLCHEAGLRILIGTVVRYAAKYDLGVEVLLAYHRD 224 Query: 1069 FYVRVFVRVFTSASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVV 1248 Y R F+++ + A + + +L +++ K+ +Y G P Sbjct: 225 HYFRAFLKLKSGAKKADKSLSQLGFLW----------------ADKSGRFEYRRGFLPDK 268 Query: 1249 PQECSDCGKKFNVGGPIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELH 1428 P GP++ P+ D+ +V L R D A+ K S L +SEEL Sbjct: 269 P----------GASGPLWLGPLKDESFVEELLESAR---DHPLAHKKTLSFLQLISEEL- 314 Query: 1429 DIPLFFSLHNISGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIMR 1608 D+P + H ++ T P + + G+ + +H +P +K+DAP+ V+ ++M+ Sbjct: 315 DVPFHYDTHTLARACSLTPPKLDVIIQRLRELGHSATKTHFSPTSVKTDAPFGVVAEVMK 374
>P81554:TRM1_PYRFU N(2),N(2)-dimethylguanosine tRNA methyltransferase - Pyrococcus| furiosus Length = 381 Score = 150 bits (380), Expect = 2e-35 Identities = 102/360 (28%), Positives = 176/360 (48%), Gaps = 12/360 (3%) Frame = +1 Query: 565 LKPPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISK--- 735 LKP IVL+AL+A+G+R +R+A E ++ D ++ + E K+N+ N + + Sbjct: 48 LKPKIVLDALSATGIRGIRFALETPA-EEIWMNDINELAYELMKKNVLLNFKGTLKENAK 106 Query: 736 ---------VEAHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTA 888 + + DA M + F +DLDP+GSP FLD+A+++V G+L TA Sbjct: 107 RAIFEGEKTIVINNDDANRLMAEKHRYFHFIDLDPFGSPMEFLDTALRSVKRKGILGVTA 166 Query: 889 TDLAVLCGTNGEVCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMD 1068 TD A LCG + + C KY + P+RG+ CHE+ RIL+ I +A +Y + +L+ + D Sbjct: 167 TDGAPLCGAHPKACLRKYLAVPLRGELCHEVGTRILVGVIARYAAKYDLGMEVLLAYYKD 226 Query: 1069 FYVRVFVRVFTSASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVV 1248 Y R FV++ A + L YVY + GR + + + P Sbjct: 227 HYFRAFVKLKDGAKKGDETLENLGYVY--------FDEKTGRFEVEKSFLSTRP------ 272 Query: 1249 PQECSDCGKKFNVGGPIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELH 1428 N GP++ P+ ++ V+ + ++ Y ++ +L + EEL Sbjct: 273 -----------NAYGPLWLGPLKNEK-VVGEMLELLVSGFEVANYREVLKLLHMLHEEL- 319 Query: 1429 DIPLFFSLHNISGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIMR 1608 DIPLF+ H + +K + + GY+ + +H +P G+K++AP++V ++MR Sbjct: 320 DIPLFYDTHALGKRLKIEPKKLGEIIKELKSMGYEATRTHFSPTGIKTNAPYEVFVEVMR 379
>Q9V1P3:TRM1_PYRAB N(2),N(2)-dimethylguanosine tRNA methyltransferase - Pyrococcus| abyssi Length = 383 Score = 147 bits (372), Expect = 1e-34 Identities = 101/359 (28%), Positives = 174/359 (48%), Gaps = 12/359 (3%) Frame = +1 Query: 565 LKPPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNI---------KFNG 717 LKP IVL+AL+A+G+R +R+A E ++ D + + K+N+ + NG Sbjct: 50 LKPRIVLDALSATGIRGIRFALETPA-EEIWMNDISEDAYNLMKKNVLLNFKGELEESNG 108 Query: 718 ASVISKVEAHLA---DARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTA 888 +V+ + + DA M + F +DLDP+GSP FLD+A+++V G+L TA Sbjct: 109 RAVLKSEKTLVVNHDDANRLMAEKHRYFHFIDLDPFGSPMEFLDTALRSVKRKGILGITA 168 Query: 889 TDLAVLCGTNGEVCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMD 1068 TD A LCG + + C KY + P+RG+ CHE+ RIL+ + +A +Y I +L+ + D Sbjct: 169 TDGAPLCGAHPKACMRKYLAVPLRGELCHEVGTRILVGVVARYAAKYDLGIEVILAYYKD 228 Query: 1069 FYVRVFVRVFTSASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVV 1248 Y R F+++ A + + L Y+Y F + Sbjct: 229 HYFRAFIKLKDGARKGDESLENLGYIYFDESTGKFEV----------------------- 265 Query: 1249 PQECSDCGKKFNVGGPIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELH 1428 E S K N GP++ P+ Q+ V L + + + +L + +EL Sbjct: 266 --ERSFLPSKPNAYGPVWLGPLKSQEIVEEMLEISQQLS--LARKKQAVKLLKILKDEL- 320 Query: 1429 DIPLFFSLHNISGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIM 1605 D+PLF+ H + +K + + + + GY+ S +H +P G+K+DAP++V +++ Sbjct: 321 DVPLFYDTHGLGRRLKIEARKIEEIINELRSLGYRASRTHFSPTGVKTDAPYEVFVNVL 379
>Q12Y46:TRM1_METBU N(2),N(2)-dimethylguanosine tRNA methyltransferase - Methanococcoides| burtonii (strain DSM 6242) Length = 386 Score = 145 bits (365), Expect = 9e-34 Identities = 106/356 (29%), Positives = 168/356 (47%), Gaps = 3/356 (0%) Frame = +1 Query: 550 KVTRELKPPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVI 729 K ELK L+A++ASG+R LR A EV G+ ++ +D A NI G S I Sbjct: 58 KKDMELKDITYLDAMSASGIRGLRIANEV-GITSILNDWSDDA-YGLILENIGLTGVSDI 115 Query: 730 SKVEAHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLC 909 + EA +A V M H + F++VDLDP+GSP+ +LD+A ++ L TATD A LC Sbjct: 116 A--EATCKNANVLM--HERRFNIVDLDPFGSPTPYLDAATRSAVH--FLEVTATDTAPLC 169 Query: 910 GTNGEVCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFV 1089 G + KY + P+ ++ EM +RILL I ++ + + P+LS YVR ++ Sbjct: 170 GAHFNSGMRKYAAVPLNNEFHSEMGVRILLGKIARELAKHDKGMTPLLSHATRHYVRTYL 229 Query: 1090 RVFTSASEIKNAPLKLSYVYQCVGC---DSFHLQSLGRTVTKNNSVKYAPGIGPVVPQEC 1260 +V A A L ++ C C + FH G+ + C Sbjct: 230 QVKKGAKLADKAFKDLGFLSHCEHCGHREIFH------------------GMAISISDHC 271 Query: 1261 SDCGKKFNVGGPIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPL 1440 S CG + GP++ +H+ + L + ++DR + L + DIP Sbjct: 272 SSCGNDVYIAGPLWLGQLHEPQYCDEVLLE---LEDRSLGTKEQAKKLILACRDELDIPF 328 Query: 1441 FFSLHNISGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIMR 1608 F+ H I + ++P+ MF +A+ G +S +H + K+DA D I D++R Sbjct: 329 FYDQHVICKMIGVSAPAMDMFIAALRETGANVSRTHFTGISFKTDAKIDTIKDVLR 384
>Q8PU28:TRM1_METMA N(2),N(2)-dimethylguanosine tRNA methyltransferase - Methanosarcina| mazei (Methanosarcina frisia) Length = 388 Score = 135 bits (340), Expect = 7e-31 Identities = 97/336 (28%), Positives = 161/336 (47%), Gaps = 3/336 (0%) Frame = +1 Query: 583 LEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHLADAR 762 ++A +ASG+R LR A EV G+ + D + E K NIK NG K +A +A Sbjct: 69 VDAFSASGIRGLRIAGEV-GIHSTMN-DWSHEAFELIKENIKINGLE--EKAQATRRNAN 124 Query: 763 VYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGEVCYSKY 942 V L H + F +VD+DP+G+PS +LD+A + +L TATD A LCG + KY Sbjct: 125 V--LLHEQRFHIVDVDPFGTPSPYLDAAASSAYS--MLSVTATDTAPLCGAHLNSGIRKY 180 Query: 943 GSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSASEIKN 1122 S P+ +Y EM LR+LL + ++++ ++P+LS YVR ++ V + + Sbjct: 181 ASVPLNTEYHSEMGLRVLLGACARELAKHEKGMLPLLSHVTRHYVRTYLEVLPGSRKADK 240 Query: 1123 APLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKFNVGGPIY 1302 + +V C C K G+ + +EC +CG + GP++ Sbjct: 241 TLKSMGFVAHCPRC---------------GFRKPVYGLAVHIEKECPECGGLTKIAGPLW 285 Query: 1303 SAPIHDQDW---VLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNISGTV 1473 P + ++ V+S L + P+ + K+ ++T +EL DIP+F+ H I + Sbjct: 286 LGPYREPEFCNEVISEL-EAHPLNTK----EKVRKIITFCRDEL-DIPMFYDQHVICKEL 339 Query: 1474 KCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAP 1581 ++ A+ G++ S +H K+DAP Sbjct: 340 GASATGIESLIEALRAGGFEASRTHFTGTSFKTDAP 375
>Q466T6:TRM1_METBF N(2),N(2)-dimethylguanosine tRNA methyltransferase - Methanosarcina| barkeri (strain Fusaro / DSM 804) Length = 388 Score = 132 bits (333), Expect = 4e-30 Identities = 99/347 (28%), Positives = 168/347 (48%), Gaps = 5/347 (1%) Frame = +1 Query: 583 LEALAASGLRSLRYAREVDGLGKVVALDNDKA--SVEACKRNIKFNGASVISKVEAHLAD 756 ++A +ASG+R LR A EV + A ND + + E K N K NG + A+ Sbjct: 69 VDAFSASGIRGLRIAGEVG----IHATMNDWSPEAFELIKENSKINGLEENTLATRKSAN 124 Query: 757 ARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGEVCYS 936 +L H +++ +VD+DP+G+P+ FLD+A +V G+L TATD A LCG + + Sbjct: 125 ----VLLHEQKYHIVDIDPFGTPAPFLDAASASVR--GMLSVTATDTAPLCGAHLKAGIR 178 Query: 937 KYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSASEI 1116 KY S P+ +Y EM LR+LL + ++++ ++P+LS YVR ++ V + Sbjct: 179 KYASVPLNTEYHSEMGLRVLLGACARELAKHEKGMLPLLSHVTRHYVRTYLEVLPGTKQT 238 Query: 1117 KNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKFNVGGP 1296 + + C C F G V + +EC CG + GP Sbjct: 239 DRTLKSMGFSIHCPKC-GFRGPVYGLAVH--------------IEKECPVCGSFTQIAGP 283 Query: 1297 IYSAPIHDQ---DWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNISG 1467 ++ P +Q D V+S L ++ P+ + +K ++T +EL DIP+F+ H I Sbjct: 284 LWLGPFREQAFCDEVISEL-EMHPLNTK----DKAKKIITFCRDEL-DIPMFYDQHVICK 337 Query: 1468 TVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIMR 1608 + ++ + A+ G++ S +H + ++DAP I +I+R Sbjct: 338 ELGASATGIEILIEALKAHGFEASRTHFSGTSFRTDAPITEIKEIIR 384
>Q8TGX6:TRM1_METAC N(2),N(2)-dimethylguanosine tRNA methyltransferase - Methanosarcina| acetivorans Length = 388 Score = 131 bits (330), Expect = 1e-29 Identities = 100/336 (29%), Positives = 161/336 (47%), Gaps = 3/336 (0%) Frame = +1 Query: 583 LEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHLADAR 762 ++A +ASG+R LR A EV G+ + N +A E K NIK NG K +A +A Sbjct: 69 VDAFSASGIRGLRIAGEV-GIHSTMNDWNPEA-FELIKENIKINGLE--EKAQATRKNAN 124 Query: 763 VYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGEVCYSKY 942 V L H ++F +VD+DP+G+P+ +LD+A A A G+L TATD A LCG + KY Sbjct: 125 V--LLHEQKFHIVDVDPFGTPAPYLDAA--ATAAQGMLSVTATDTAPLCGAHLNSGIRKY 180 Query: 943 GSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSASEIKN 1122 + P+ +Y EM LR+LL + ++++ ++P+LS YVR ++ V Sbjct: 181 AAVPLNTEYHSEMGLRVLLGACARECAKHEKGMLPLLSHVTRHYVRSYLEVLPGTKHADR 240 Query: 1123 APLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKFNVGGPIY 1302 A + + C C F G V + +EC CG + GP++ Sbjct: 241 ALKSMGFSIYCPKC-GFRGPVYGLAVH--------------IEKECPACGALTKIAGPLW 285 Query: 1303 SAPIHDQDW---VLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNISGTV 1473 P + + VLS L + P+ + K ++T +EL DIP+F+ H I + Sbjct: 286 LGPFREPKFCNEVLSEL-EAHPLNTK----EKAKKIITFCRDEL-DIPMFYDQHVICKEL 339 Query: 1474 KCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAP 1581 ++ A+ G++ S +H + ++DAP Sbjct: 340 GASATGIETLIEALKAGGFEASRTHFSGTSFRTDAP 375
>Q58356:TRM1_METJA N(2),N(2)-dimethylguanosine tRNA methyltransferase - Methanococcus| jannaschii Length = 374 Score = 131 bits (329), Expect = 1e-29 Identities = 99/350 (28%), Positives = 161/350 (46%), Gaps = 6/350 (1%) Frame = +1 Query: 580 VLEALAASGLRSLRYAREVDGLGKVVALDND--KASVEACKRNIKFNGASVISKVEAHLA 753 + +ALA SG+R LRYA+E++ G++ ND + E N K N I ++ Sbjct: 56 IADALAGSGIRGLRYAKELEFNGELKVFLNDINPKAYEKIINNAKLNE---IENIDVFNE 112 Query: 754 DARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQA-VADGGLLMCTATDLAVLCGTNGEVC 930 DA ++ H + F+VVD+DP+GSP+ +++ A++A V GLL TATD A LCG + + C Sbjct: 113 DANTFLSKHFRFFNVVDIDPFGSPAPYVEQAIRALVTRNGLLCLTATDTAALCGRSKKSC 172 Query: 931 YSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSAS 1110 KY +YP+ G+ CHE ALR+L+ + A +Y+ + PV D YVRV++ A Sbjct: 173 LRKYLAYPLFGRDCHEFALRVLVGYVMRMATKYELALKPVFCHATDHYVRVYLVTDRGAK 232 Query: 1111 EIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKFNVG 1290 L YV G + K Y G Sbjct: 233 RADKVFEMLGYVKDVNGI----------KIIKKFEEGYEKGF-----------------A 265 Query: 1291 GPIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEE--LHDIPLFFSLHNIS 1464 GP+Y ++D+ V L + ++ ++ +L + E ++ + + H I Sbjct: 266 GPLYIGNLYDKALVEEAL----KIAEKREFSERVLKILNAIKGESAINQVGC-YDTHQIG 320 Query: 1465 GTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPW-DVIWDIMRC 1611 +K + P + + G+ +H NP G+K+DA +VI I +C Sbjct: 321 KMLKISVPPMQDIINKLKEMGFNAVVTHYNPKGIKTDATLKNVIEAIYQC 370
>Q9HH73:TRM1_METMP N(2),N(2)-dimethylguanosine tRNA methyltransferase - Methanococcus| maripaludis Length = 373 Score = 130 bits (327), Expect = 2e-29 Identities = 99/337 (29%), Positives = 158/337 (46%), Gaps = 3/337 (0%) Frame = +1 Query: 577 IVLEALAASGLRSLRYAREVDGLG--KVVALDNDKASVEACKRNIKFNGASVISKVEAHL 750 ++ + L SG R +RYA+E+ G KV D + ++V+ K N+K N + VE Sbjct: 55 LMCDPLGGSGARGIRYAKELKFNGDLKVSIGDINPSAVKMIKENLKLNE---LENVEVFH 111 Query: 751 ADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQA-VADGGLLMCTATDLAVLCGTNGEV 927 DA V + + K F+VVDLDP+GSP +LDS ++A + GGLL TATD AVLCG + Sbjct: 112 EDANVLLSKNFKVFNVVDLDPFGSPVPYLDSGIRASLTKGGLLCMTATDTAVLCGAYRKT 171 Query: 928 CYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSA 1107 C KY + P++G E+A+R+++ A++Y + P+ S D Y R F+ A Sbjct: 172 CIRKYNAVPLKGD--KELAVRLMIGYAVKMASKYDIGLKPIFSHVTDHYARTFMVTERGA 229 Query: 1108 SEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKFNV 1287 + +A L Y+ Q SF +T + + YA Sbjct: 230 GKADSAIENLGYIRQDSEQKSF------KTFEEGSEKGYA-------------------- 263 Query: 1288 GGPIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNISG 1467 GP Y I D++ V + L + A N + + + E++ + F +H + Sbjct: 264 -GPFYLGEISDKNIVQNALNTAKTRNYSKRAVNILEMI--SRESEINQVGC-FDIHELCS 319 Query: 1468 TVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDA 1578 +K P + G++++ H NP GLK+DA Sbjct: 320 FIKKLVPPVNDIMENLKENGFKVTRVHYNPYGLKTDA 356 Score = 35.0 bits (79), Expect = 1.3 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 8/106 (7%) Frame = +1 Query: 223 EIKKEGEAEIL------MLNSNAVFFNPVQVHNRDMSIAVLRTFVAKRKEEHEELMNKRN 384 +I EGE +++ + + VF+NPV NRD+S++V+++F+ K + E LM Sbjct: 2 KIISEGETKLMVPEESTLSKKDTVFYNPVMETNRDISVSVVQSFLDDFKRD-EFLMCDPL 60 Query: 385 NKSHKKGNQIETHV-VNGDTALTQHD-ETDVVHEKEPNQATNEIED 516 S +G + + NGD ++ D V + N NE+E+ Sbjct: 61 GGSGARGIRYAKELKFNGDLKVSIGDINPSAVKMIKENLKLNELEN 106
>Q97ZH0:TRM1_SULSO N(2),N(2)-dimethylguanosine tRNA methyltransferase - Sulfolobus| solfataricus Length = 378 Score = 128 bits (321), Expect = 1e-28 Identities = 89/344 (25%), Positives = 169/344 (49%), Gaps = 1/344 (0%) Frame = +1 Query: 565 LKPPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEA 744 LKP I+++AL+A+G+R +RY E +++ D + + + N K NG I + Sbjct: 54 LKPKIIVDALSATGIRGIRYYVESWKSEQLILNDKNPNATSLIQINAKNNG---IENAKI 110 Query: 745 HLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGE 924 + DA L + + D +D+DP+GSP+ F+ S++ A G++ TATDL+ L G++ Sbjct: 111 YNKDANA--LLYEVKSDYIDIDPFGSPAPFILSSLNAATRNGIVAFTATDLSPLEGSSPT 168 Query: 925 VCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTS 1104 C KY + + E+ LR+L+ I A ++ + P+ S + D+Y R+FVRV Sbjct: 169 SCRRKYDAINHKLSSSKELGLRVLIGKIIREAAILEKTVYPLFSFYADYYYRLFVRVENG 228 Query: 1105 ASEI-KNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKF 1281 A + N L Y +C C +T + N +C CG+ F Sbjct: 229 ARKADDNINKHLKYFGECPRCGF-------QTFVEEN-----------CKTKCPVCGEIF 270 Query: 1282 NVGGPIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNI 1461 ++ GP+Y P++ ++ L + D+ + ++N+I +L + +E +F+++ + Sbjct: 271 SIIGPLYIGPLYSMEF-LKRIMDLYSNFNYLTSFNRIQKLLNVIEKEARFKNVFYNISKL 329 Query: 1462 SGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVI 1593 + +K SA+ +++ S +H P G+++D ++ I Sbjct: 330 ASKLKI---SAIPPIESILECLGDASRTHFAPTGIRTDKEYEEI 370
>Q3IUJ2:TRM1_NATPD N(2),N(2)-dimethylguanosine tRNA methyltransferase - Natronomonas| pharaonis (strain DSM 2160 / ATCC 35678) Length = 366 Score = 124 bits (311), Expect = 2e-27 Identities = 106/335 (31%), Positives = 154/335 (45%), Gaps = 3/335 (0%) Frame = +1 Query: 583 LEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHLADAR 762 L+A+AASG+RS+R A V A D D +V +RN+ NG V+ + Sbjct: 55 LDAMAASGIRSVRAAAAGYD---VTACDIDDDAVALTRRNLDRNG------VDGTVHHRN 105 Query: 763 VYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGEVCYSKY 942 V H DVVDLDP+G+P F D+AV++ G L TATD A LCG + E Y Sbjct: 106 VNAHMHESAHDVVDLDPFGTPMAFADAAVRSA--GEYLCVTATDTAPLCGAHFESGVRSY 163 Query: 943 GSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSASEIKN 1122 + P ++ EM LR+LL+++ A R+ PVLS YVR ++RV + A Sbjct: 164 DAVPRNTEFHAEMGLRVLLSALVRTAARHDIAAEPVLSHVTSHYVRTYLRVDSGARAADA 223 Query: 1123 APLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKFNVGGPIY 1302 L Y+ C C L R + G P C CG+ GP++ Sbjct: 224 LLEHLGYIDHCQRC-------LWR--------DHERGRVPDPTTTCPHCGQSTWTAGPVW 268 Query: 1303 SAPIHDQDWVLSTLTDVR-PMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNISGTVKC 1479 P HD +V DV + D + +K +L+TV+ ELH P + H + + Sbjct: 269 LGPAHDAAFV----DDVAGAIPDSFGTADKARDLLSTVATELHQ-PTHYDQHKL--YKRW 321 Query: 1480 TSPSAVM--FRSAVINAGYQISSSHCNPLGLKSDA 1578 P+ M F +A+ AG++ S +H K+DA Sbjct: 322 NEPNIAMDDFLAALRAAGHEASRTHYGGTTFKTDA 356
>P57705:TRM1_HALSA N(2),N(2)-dimethylguanosine tRNA methyltransferase - Halobacterium| salinarium (Halobacterium halobium) Length = 371 Score = 120 bits (301), Expect = 2e-26 Identities = 101/342 (29%), Positives = 153/342 (44%), Gaps = 3/342 (0%) Frame = +1 Query: 559 RELKPPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKV 738 RE + L+A+ ASG+R +R A + V D D +VE N+ NG Sbjct: 49 REPRAASYLDAMTASGIRGVRAA---NAGWDVTMADVDADAVELATSNLARNGLDG---- 101 Query: 739 EAHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMC-TATDLAVLCGT 915 E DA + H + DVVD+DP+GSP F D+A A+ L+C TATD A LCG Sbjct: 102 EVVARDANSLLHDHDRVLDVVDIDPFGSPMPFADAAF---ANARNLVCVTATDTAPLCGA 158 Query: 916 NGEVCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRV 1095 + E KY + P Y EM LRILL ++ A RY + P+LS D YVR ++ + Sbjct: 159 HFESGVRKYSATPRNTNYHAEMGLRILLGALARTAARYDVGVTPILSHVSDHYVRTYLEL 218 Query: 1096 FTSASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDC-G 1272 A++ A ++ +VY C C S + G+ EC C G Sbjct: 219 DHRATDANAAVEQVGHVYHCQQC---------------LSRDHEYGLVAAPRAECPRCGG 263 Query: 1273 KKFNVGGPIYSAPIHDQDWVLSTLTDV-RPMKDRYPAYNKITSVLTTVSEELHDIPLFFS 1449 + GP++ P H++ + S + R M + A++ +L T+ ELH+ P + Sbjct: 264 HQVLTAGPLWLGPAHEEAFAASVREQLTREMGEASQAFH----LLQTIEGELHE-PTHYD 318 Query: 1450 LHNISGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSD 1575 H + + F + +AG + S +H K+D Sbjct: 319 QHRLYSQWGEPAVGMAEFLDQLRDAGLRASRTHFGGTTFKTD 360
>Q971V9:TRM1_SULTO N(2),N(2)-dimethylguanosine tRNA methyltransferase - Sulfolobus| tokodaii Length = 374 Score = 119 bits (297), Expect = 7e-26 Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 2/345 (0%) Frame = +1 Query: 565 LKPPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEA 744 +KP V++AL+ASG+R +RY E+ G+ K++ D + + E K+N + N V A Sbjct: 54 IKPKSVVDALSASGVRGIRYYTEIGGIEKLILNDKNPIATELIKKNAEKN------YVNA 107 Query: 745 HLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGE 924 + L + + D VD+DP+GSP+ F+ SA+ A + G + TATDL+ L ++ Sbjct: 108 RITTKDANSLLYEIKADFVDIDPFGSPAPFILSAINATINKGYVAFTATDLSALECSSKF 167 Query: 925 VCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTS 1104 KY R + E+ +R L+A + ++ P+ S + D+Y RVF R+ Sbjct: 168 SARRKYDLICERLSFSKELGIRGLIAKVIREGAIIEKAAYPIFSFYFDYYYRVFFRIENG 227 Query: 1105 ASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKFN 1284 A ++ K Y Y+C C + + C CG + Sbjct: 228 AKKVDKLLEKQGYYYECSKCGYREVDYYAER------------------KICPRCGIEMR 269 Query: 1285 VGGPIYSAPIHDQDWVLSTLTDVRPMK--DRYPAYNKITSVLTTVSEELHDIPLFFSLHN 1458 GP ++ + +++++LS +++ D + NK+ ++L EE + +F L Sbjct: 270 RYGPAWTGELWNREFLLSMKENLKNFTYFDTFMQVNKLLNILV---EESKYVSPYFRLDF 326 Query: 1459 ISGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVI 1593 I+ +K P R ++ + S +H + G+K++ D I Sbjct: 327 IASLIKRNIPK----REKMLECLKEASITHFDYRGIKTNKEIDEI 367
>O67010:TRM1_AQUAE Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase - Aquifex| aeolicus Length = 392 Score = 118 bits (296), Expect = 9e-26 Identities = 73/258 (28%), Positives = 128/258 (49%), Gaps = 4/258 (1%) Frame = +1 Query: 568 KPPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAH 747 +P V + L+ASG+R++R+ E + K A D ++E K N K N + E H Sbjct: 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPE-DRYEIH 110 Query: 748 LADARVYMLTHPKE----FDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGT 915 +A ++ KE FD VDLDP+G+P F++S ++ GG+L TATD A L GT Sbjct: 111 GMEANFFLR---KEWGFGFDYVDLDPFGTPVPFIESVALSMKRGGILSLTATDTAPLSGT 167 Query: 916 NGEVCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRV 1095 + C +Y + P+R ++ HE+ +RIL+ + A +Y ++P+ + Y ++F Sbjct: 168 YPKTCMRRYMARPLRNEFKHEVGIRILIKKVIELAAQYDIAMIPIFAYSHLHYFKLFFVK 227 Query: 1096 FTSASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGK 1275 ++ + Y+ C C + R V + K+ ++C CG Sbjct: 228 ERGVEKVDKLIEQFGYIQYCFNC-------MNREVV-TDLYKF--------KEKCPHCGS 271 Query: 1276 KFNVGGPIYSAPIHDQDW 1329 KF++GGP++ + D+++ Sbjct: 272 KFHIGGPLWIGKLWDEEF 289
>O29443:TRM1_ARCFU N(2),N(2)-dimethylguanosine tRNA methyltransferase - Archaeoglobus| fulgidus Length = 349 Score = 117 bits (294), Expect = 1e-25 Identities = 94/341 (27%), Positives = 155/341 (45%) Frame = +1 Query: 586 EALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHLADARV 765 +AL+ASG+R +R A E K V D +V+ + N++ NG S E DA Sbjct: 42 DALSASGIRGIRAALEAGK--KAVFNDVSPKAVKVIEENLRENGVSG----EVINGDAAA 95 Query: 766 YMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGEVCYSKYG 945 M + F+ +D+DP+GSP+ F+DSA + L TATD A LCG+ KYG Sbjct: 96 VM--RQRAFEHIDIDPFGSPAPFMDSACFSAKR--YLSVTATDTAALCGSATNSGLKKYG 151 Query: 946 SYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSASEIKNA 1125 ++ V+ HE+ LR+L+ + A +Y++ + P++S + Y RV ++ S + Sbjct: 152 AFAVKTDVYHEVGLRMLIGFVVREATKYEKALFPLISWVREHYYRVHFKIKKSTAMSAKV 211 Query: 1126 PLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKFNVGGPIYS 1305 K+ Y+ C C + +G E +CG KF++ GPI+ Sbjct: 212 YEKMGYLAYCSTCLRKKVLGMGEGA------------------ERCECGGKFSLIGPIWL 253 Query: 1306 APIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNISGTVKCTS 1485 + +D+ K A K+ + L + E+ D P +SL ++ T Sbjct: 254 GELKQRDFA---------EKVAEKAEGKLRAFLEKILAEI-DAPTAYSLPALAKIHSLTL 303 Query: 1486 PSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIMR 1608 P + + GY+ S +H +K+DA DV+ I+R Sbjct: 304 PPTDVVVEELKKLGYEASRTHYCGFCVKTDADRDVVVKILR 344
>Q97AR2:TRM1_THEVO N(2),N(2)-dimethylguanosine tRNA methyltransferase - Thermoplasma| volcanium Length = 342 Score = 116 bits (290), Expect = 4e-25 Identities = 97/348 (27%), Positives = 152/348 (43%), Gaps = 1/348 (0%) Frame = +1 Query: 580 VLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHLADA 759 VL+ SG+R +R + E KVV + +S E K+NI N A EA L Sbjct: 50 VLDGFGGSGVRGIRISLETKA--KVVIAEISPSSCEIIKQNIAINNA------EADLIHD 101 Query: 760 RVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGEVCYSK 939 ++ FD +D+DPYGSP +LD+A+ V GG L TATD + L G+ + Sbjct: 102 NFQCVSSHIAFDYIDVDPYGSPVPYLDAAIMNVRKGGYLGITATDQSTLTGSTLNKTRRR 161 Query: 940 YGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSASEIK 1119 YG+Y V Y HEM +R L+ I A + RYI P LS++ Y RVFV+V + Sbjct: 162 YGAYIVNDIYRHEMGIRTLIGYIARRAAAFDRYIEPQLSIWNHHYYRVFVKVGKGVNGAD 221 Query: 1120 NAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKFNVGGPI 1299 + Y L + T +NS K D + GP+ Sbjct: 222 KMIENIGY--------------LNKHTTIDNSFK--------------DVNE-----GPV 248 Query: 1300 YSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFF-SLHNISGTVK 1476 + + +++ + +L + D R K KI + HD L F L +I+ Sbjct: 249 WLSNLNNAE-LLEKIRDPRVSK-------KIEMI-------KHDNRLLFVDLTDIARKTS 293 Query: 1477 CTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIMRCWVK 1620 + P ++ GY+ + +P G+K+D P+ + +I++ + K Sbjct: 294 LSLPPLAKVMDEIMKHGYEAHRTSFSPTGIKTDCPYAEVSEILKAYAK 341
>Q5UYV8:TRM1_HALMA N(2),N(2)-dimethylguanosine tRNA methyltransferase - Haloarcula| marismortui (Halobacterium marismortui) Length = 367 Score = 114 bits (284), Expect = 2e-24 Identities = 98/342 (28%), Positives = 155/342 (45%), Gaps = 2/342 (0%) Frame = +1 Query: 559 RELKPPI--VLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVIS 732 RE P + L+A AASG+R +R A D + +D+D ++ C++N++ N + Sbjct: 45 RERTPRVSTYLDATAASGIRGVRAAAN-DWETTLCDIDDDATAL--CEQNLERNDLAA-- 99 Query: 733 KVEAHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCG 912 +DA V M H + FDVVD+DP+G+P F D+AVQ LL TATD A LCG Sbjct: 100 --SVRRSDANVLM--HSEAFDVVDVDPFGTPIPFADAAVQGTKH--LLCVTATDTAPLCG 153 Query: 913 TNGEVCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVR 1092 + E YG+ P ++ EM +R+LL+++ A RY P+LS Y R ++ Sbjct: 154 AHFESGVRSYGAVPRNTEFHAEMGMRVLLSAMVRTAARYDIAARPILSHATKHYARTYLE 213 Query: 1093 VFTSASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCG 1272 A + +L YV+ C C L R + G+ P++C C Sbjct: 214 FDHGAKVANDCIDELGYVHHCQHC-------LWR--------DHDYGLIADPPEDCPVCE 258 Query: 1273 KKFNVGGPIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSL 1452 K GPI+ D ++V + V + ++ +L T+ E+ D P + Sbjct: 259 KHLQTAGPIWLGRTCDPEFVSAVSEQV---SEEMGTADEAKELLATLGAEI-DTPTHYDQ 314 Query: 1453 HNISGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDA 1578 H + + + F + +AGY S +H K+DA Sbjct: 315 HRLCKRWGRGAEAMDEFIEKLRDAGYAASRTHYGGTTFKTDA 356
>Q8ZWT5:TRM1_PYRAE N(2),N(2)-dimethylguanosine tRNA methyltransferase - Pyrobaculum| aerophilum Length = 363 Score = 110 bits (275), Expect = 2e-23 Identities = 92/336 (27%), Positives = 151/336 (44%) Frame = +1 Query: 577 IVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHLAD 756 +V E L+ +G+R +RYA E +GK++ D K +VE K+N++ NG E + D Sbjct: 56 VVCEPLSGTGVRGIRYAVESGVVGKLILNDISKEAVELIKKNLEINGVDA----EVYNED 111 Query: 757 ARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGEVCYS 936 A V + DVVD+DP+GSP+ F+ A +A+ + GL+ TATD AVL G C Sbjct: 112 ANVLLHKLKDSCDVVDIDPFGSPAPFIHGAFRALKEEGLICATATDTAVLVGRYPRKCLR 171 Query: 937 KYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFTSASEI 1116 +YGS V+ + E+ LR LL I A I P++S + Y RV A + Sbjct: 172 RYGSVIVKTPFYIEVGLRNLLGYIARVAAAEDYKITPLMSYWEGHYFRVCAYAARGARDA 231 Query: 1117 KNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKFNVGGP 1296 D+FH + +KY G+ ++ + GP Sbjct: 232 D---------------DNFHHIAY---------IKYERGVRKILHAQSE------GSSGP 261 Query: 1297 IYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNISGTVK 1476 ++ P+ D +++ ++++ P +D + KI + ++S P F+ L + K Sbjct: 262 LWVGPLGD-PLIINKMSEIGPYQD----FLKILAEEYSIS-----APWFYRLPEFAAGGK 311 Query: 1477 CTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPW 1584 SP+ + AG +H P G K+D + Sbjct: 312 --SPTLKEAVGVLRAAGIYAVRTHMAPDGFKADGEY 345
>Q18EA0:TRM1_HALWD N(2),N(2)-dimethylguanosine tRNA methyltransferase - Haloquadratum| walsbyi (strain DSM 16790) Length = 385 Score = 103 bits (256), Expect = 4e-21 Identities = 95/346 (27%), Positives = 150/346 (43%), Gaps = 6/346 (1%) Frame = +1 Query: 559 RELKPPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFN---GASVI 729 RE + L+A+ ASG+R +R A G V D D +V + N++ N G ++ Sbjct: 50 REPRAETYLDAMTASGVRGVRAA--ASGYD-VTCTDIDPDAVALAQSNLEKNDLDGQTLP 106 Query: 730 SKVEAHLADARVYMLTHPKE-FDVVDLDPYGSPSVFLDSAVQAVADGGLLMC-TATDLAV 903 S A L + P+ FDVVDLDP+G+P F D+A A+ L+C TATD A Sbjct: 107 SDANAVLHQSGPESPLGPEAIFDVVDLDPFGTPIPFADAAF---ANARNLVCVTATDTAP 163 Query: 904 LCGTNGEVCYSKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRV 1083 LCG + + Y + P +Y EM LR+LL+++ A RY +P+LS YVR Sbjct: 164 LCGAHQQSGIRTYSTLPRNTEYHPEMGLRVLLSALIRTAARYDTAAIPILSHVTRHYVRT 223 Query: 1084 FVRVFTSASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECS 1263 ++ + T A+ L YVY C C +T+ + + P C Sbjct: 224 YLELDTRATRADELLSDLGYVYHCEDC-----------LTRQHEFGHIAH----PPSMCH 268 Query: 1264 DC-GKKFNVGGPIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPL 1440 C G + GP+Y I +Q + + + S+L V EL + P Sbjct: 269 HCEGNRVITAGPLYLGSIREQGFTRRVRNHI---TTEMGEIKQADSILKMVENEL-ETPT 324 Query: 1441 FFSLHNISGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDA 1578 + H + ++ F + AG+ + +H + K++A Sbjct: 325 HYDQHRLCKKWTRSAIGMDEFIEQLHTAGFDATRTHYSGTAFKTNA 370
>Q9YDY7:TRM1_AERPE N(2),N(2)-dimethylguanosine tRNA methyltransferase - Aeropyrum pernix| Length = 407 Score = 93.2 bits (230), Expect = 4e-18 Identities = 92/349 (26%), Positives = 157/349 (44%), Gaps = 13/349 (3%) Frame = +1 Query: 577 IVLEALAASGLRSLRYAREVDGLGKVVALD-NDKASVEACKRNIKFNGASVISKVEAHL- 750 + +A A G+R +RYA E G KV+ D N KAS+ A N + NG S + + Sbjct: 71 VAFDAHAGVGVRGVRYAVEA-GYVKVIMNDINPKASMLAAL-NARANGLEPGSYMIFNKE 128 Query: 751 ADARVYMLTH--PKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGE 924 +++ ++ L+ P ++D+DPYGSP+ F+D+A+ G ++ TATDLAVL G Sbjct: 129 SNSLMFHLSRERPTPVSLIDIDPYGSPAPFVDAALALSGKGTVVAMTATDLAVLEGGKAR 188 Query: 925 VCYSKYGSYPV-RGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRVFT 1101 +Y V + E LR+LL + A + + + P+L+ + D Y RV+V V Sbjct: 189 AAVRRYMLRSVSKTPVSKETGLRVLLGYVARVAAAHDKAVKPLLAYYADHYYRVYVAVER 248 Query: 1102 SASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVV-----PQECSD 1266 A DS ++LGR V Y P G + S Sbjct: 249 GARR----------------SDSMLEENLGRLV-------YCPETGVALALSYAEDPASA 285 Query: 1267 CGKKFNVGG-PIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEE--LHDIP 1437 CG + V P + + DQ + L + ++ ++ +L T+ E L Sbjct: 286 CGGSYVVAADPAWIGSLGDQAF-LEAMLNIAVEAVWLGTRPRVEKLLNTLHGEAPLSPRS 344 Query: 1438 LFFSLHNISGTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPW 1584 ++ SL +++ + +P + + GY+ ++H + G+++DAPW Sbjct: 345 IYVSLTSVASKARVNTPKKSKVVELLRSMGYRAVATHFSGEGVRTDAPW 393
>P57706:TRM1_THEAC N(2),N(2)-dimethylguanosine tRNA methyltransferase - Thermoplasma| acidophilum Length = 344 Score = 87.8 bits (216), Expect = 2e-16 Identities = 89/347 (25%), Positives = 151/347 (43%), Gaps = 5/347 (1%) Frame = +1 Query: 580 VLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNG--ASVISKVEAHLA 753 VL+ +G+R +R ++E D + + D S + N++ NG ASVI+ Sbjct: 50 VLDGFGGTGIRGIRISKETDSAVTISEVSPD--SYRLIRDNVERNGSQASVIN------- 100 Query: 754 DARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQAVADGGLLMCTATDLAVLCGTNGEVCY 933 D+ +L H ++ VD+DPYGSP +LD+A+ V G L TATD + L G+ Sbjct: 101 DSFECVLQHGA-YEYVDVDPYGSPVPYLDAALMGVKRNGFLGVTATDQSALTGSVPHKTR 159 Query: 934 SKYGSYPVRGKYCHEMALRILLASIESHANRYKRYIVPVLSVFMDFYVRVFVRV---FTS 1104 +Y + + HEM +R+L+ + A R+I P++S++ Y RVFVRV F Sbjct: 160 IRYDALIKNDTFRHEMGIRLLIGYMAKRAASLGRFIDPLISIWHGHYYRVFVRVRKGFEG 219 Query: 1105 ASEIKNAPLKLSYVYQCVGCDSFHLQSLGRTVTKNNSVKYAPGIGPVVPQECSDCGKKFN 1284 A + +Q+LG V K+N + GI + + Sbjct: 220 AGRM--------------------MQNLG-YVNKHNLLS---GIYQDMDE---------- 245 Query: 1285 VGGPIYSAPIHDQDWVLSTLTDVRPMKDRYPAYNKITSVLTTVSEELHDIPLFFSLHNIS 1464 GP++ + D + L + A+N + L LF L +I+ Sbjct: 246 --GPVWKGNLQDNAVAEAVLASA-----GHKAFNPEENRL-----------LFCDLTDIA 287 Query: 1465 GTVKCTSPSAVMFRSAVINAGYQISSSHCNPLGLKSDAPWDVIWDIM 1605 + P A+ ++G+ S + +P G+K+DA D++ +M Sbjct: 288 RARHTSLPDIESVIDALSSSGHAASRTMFSPTGIKTDASCDLVESLM 334
>O01761:UNC89_CAEEL Muscle M-line assembly protein unc-89 - Caenorhabditis elegans| Length = 8081 Score = 35.0 bits (79), Expect = 1.3 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +1 Query: 346 RKEEHEELMNKRNNKSHKKGNQIETHVVNGDTALTQHDETDVVHEKEPNQATNEIEDPSK 525 +KE+ + N S + ET + T ++ T V EK P + + + P+K Sbjct: 1485 KKEKSPDATNIVEVSSETTIEKTETTMTTEMTHESEESRTSVKKEKTPEKVDEKPKSPTK 1544 Query: 526 EETKTPSGKVTRELKPPIVLE 588 ++ K+P +T E+K P+ E Sbjct: 1545 KD-KSPEKSITEEIKSPVKKE 1564
>Q9CSN1:SNW1_MOUSE SNW domain-containing protein 1 - Mus musculus (Mouse)| Length = 536 Score = 34.3 bits (77), Expect = 2.2 Identities = 20/66 (30%), Positives = 29/66 (43%) Frame = +1 Query: 307 DMSIAVLRTFVAKRKEEHEELMNKRNNKSHKKGNQIETHVVNGDTALTQHDETDVVHEKE 486 +M V R K KE+HEE + + K+ ++ I+THV D + DE KE Sbjct: 303 EMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRRKE 362 Query: 487 PNQATN 504 N Sbjct: 363 RQHDRN 368
>Q13573:SNW1_HUMAN SNW domain-containing protein 1 - Homo sapiens (Human)| Length = 536 Score = 34.3 bits (77), Expect = 2.2 Identities = 20/66 (30%), Positives = 29/66 (43%) Frame = +1 Query: 307 DMSIAVLRTFVAKRKEEHEELMNKRNNKSHKKGNQIETHVVNGDTALTQHDETDVVHEKE 486 +M V R K KE+HEE + + K+ ++ I+THV D + DE KE Sbjct: 303 EMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRRKE 362 Query: 487 PNQATN 504 N Sbjct: 363 RQHDRN 368
>P20447:DBP3_YEAST ATP-dependent RNA helicase DBP3 - Saccharomyces cerevisiae (Baker's| yeast) Length = 523 Score = 33.5 bits (75), Expect = 3.7 Identities = 21/67 (31%), Positives = 32/67 (47%) Frame = +1 Query: 343 KRKEEHEELMNKRNNKSHKKGNQIETHVVNGDTALTQHDETDVVHEKEPNQATNEIEDPS 522 KRK EE++ K+ +K HKK + + + D+ H+KE + E+E P Sbjct: 10 KRKVVDEEVIEKKKSKKHKKDKKDKKE---------KKDKKHKKHKKE-KKGEKEVEVPE 59 Query: 523 KEETKTP 543 KE K P Sbjct: 60 KESEKKP 66
>Q3ILB9:QUEA_PSEHT S-adenosylmethionine:tRNA ribosyltransferase-isomerase -| Pseudoalteromonas haloplanktis (strain TAC 125) Length = 343 Score = 33.1 bits (74), Expect = 4.8 Identities = 25/107 (23%), Positives = 49/107 (45%) Frame = +1 Query: 193 GDLEDKLKGFEIKKEGEAEILMLNSNAVFFNPVQVHNRDMSIAVLRTFVAKRKEEHEELM 372 G +E K+ ++ E ++L+ N+ V P ++ + S + V + +EH L Sbjct: 36 GVVEHKVFSDLLELVNENDLLVFNNTRVI--PARMFGQKASGGKVEVLVERVLDEHRVLA 93 Query: 373 NKRNNKSHKKGNQIETHVVNGDTALTQHDETDVVHEKEPNQATNEIE 513 + R +KS K GN++ ++ G T D + E E + N ++ Sbjct: 94 HVRASKSLKPGNEV---ILEGKAKATMVARHDTLFELEFEHSQNVLD 137
>P33334:PRP8_YEAST Pre-mRNA-splicing factor 8 - Saccharomyces cerevisiae (Baker's yeast)| Length = 2413 Score = 33.1 bits (74), Expect = 4.8 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 2/82 (2%) Frame = +1 Query: 1207 NNSVKYAPGIGPVVPQECSDCGKKFN-VGGPIYSAPIHDQDWV-LSTLTDVRPMKDRYPA 1380 NN++ P P+ P+E + +FN + I+ PI + V L + RP R P Sbjct: 343 NNAIPGGPKFEPLYPREEEEDYNEFNSIDRVIFRVPIRSEYKVAFPHLYNSRPRSVRIPW 402 Query: 1381 YNKITSVLTTVSEELHDIPLFF 1446 YN S + EE LFF Sbjct: 403 YNNPVSCIIQNDEEYDTPALFF 424
>Q99244:CAC1D_MESAU Voltage-dependent L-type calcium channel subunit alpha-1D -| Mesocricetus auratus (Golden hamster) Length = 1610 Score = 33.1 bits (74), Expect = 4.8 Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 9/115 (7%) Frame = +1 Query: 250 ILMLNSNAVFFNPVQVHNRDMSIAVLRTFVAKRKEEHEELMNKR----NNKSHKKGNQIE 417 IL + N + N D ++A + +KEE EE K+ + +KK N+ E Sbjct: 733 ILFICGNYILLNVFLAIAVD-NLADAESLNTAQKEEAEEKERKKIARKESLENKKNNKPE 791 Query: 418 TH-VVNGDTALTQHDETDVVHEKEP----NQATNEIEDPSKEETKTPSGKVTREL 567 + + N D +T D + +K+P + E E+ +EE + P+G R + Sbjct: 792 VNQIANSDNKVTIDDYQEETEDKDPYPPCDVPVGEEEEEEEEEPEVPAGPRPRRI 846
>P20300:TRM1_PYRWO N(2),N(2)-dimethylguanosine tRNA methyltransferase - Pyrococcus| woesei Length = 73 Score = 32.7 bits (73), Expect = 6.3 Identities = 14/23 (60%), Positives = 20/23 (86%) Frame = +1 Query: 565 LKPPIVLEALAASGLRSLRYARE 633 LKP IVL+AL+A+G+R +R+A E Sbjct: 48 LKPKIVLDALSATGIRGIRFALE 70
>Q1RAV2:RSMF_ECOUT Ribosomal RNA small subunit methyltransferase F - Escherichia coli| (strain UTI89 / UPEC) Length = 479 Score = 32.7 bits (73), Expect = 6.3 Identities = 23/80 (28%), Positives = 38/80 (47%) Frame = +1 Query: 571 PPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHL 750 P V++ AA G ++ + A ++ G ++A + + V+ NI G IS V Sbjct: 118 PQRVMDVAAAPGSKTTQIAARMNNKGAILANEFSASRVKVLHANISRCG---ISNVALTH 174 Query: 751 ADARVYMLTHPKEFDVVDLD 810 D RV+ P+ FD + LD Sbjct: 175 FDGRVFGAAVPEMFDAILLD 194
>A1AC00:RSMF_ECOK1 Ribosomal RNA small subunit methyltransferase F - Escherichia coli| O1:K1 / APEC Length = 479 Score = 32.7 bits (73), Expect = 6.3 Identities = 23/80 (28%), Positives = 38/80 (47%) Frame = +1 Query: 571 PPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHL 750 P V++ AA G ++ + A ++ G ++A + + V+ NI G IS V Sbjct: 118 PQRVMDVAAAPGSKTTQIAARMNNKGAILANEFSASRVKVLHANISRCG---ISNVALTH 174 Query: 751 ADARVYMLTHPKEFDVVDLD 810 D RV+ P+ FD + LD Sbjct: 175 FDGRVFGAAVPEMFDAILLD 194
>P14594:LEGB_PEA Legumin B [Contains: Legumin B alpha chain - Pisum sativum (Garden| pea) Length = 338 Score = 32.7 bits (73), Expect = 6.3 Identities = 21/77 (27%), Positives = 35/77 (45%) Frame = +1 Query: 340 AKRKEEHEELMNKRNNKSHKKGNQIETHVVNGDTALTQHDETDVVHEKEPNQATNEIEDP 519 ++RKEE EE +R+ K KK ++ E + +E + H K + + ++P Sbjct: 60 SQRKEEEEEEQEQRHRKHSKKEDEDEDE--------EEEEEREQRHRKHSEKEEEDEDEP 111 Query: 520 SKEETKTPSGKVTRELK 570 ET+ K T E K Sbjct: 112 RSYETRRKWKKHTAEKK 128
>Q92010:ZF161_CHICK Zinc finger protein 161 homolog - Gallus gallus (Chicken)| Length = 448 Score = 32.3 bits (72), Expect = 8.2 Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 3/126 (2%) Frame = +1 Query: 334 FVAKRKEEHEELMNKRNNKSHKKGNQIETHVVNGDTALTQHDETDVV--HEKEPNQATNE 507 F+ K + ++ + N K ++ + G+ TQ DE + + H+ P+ T E Sbjct: 119 FLDKLCSQKRDVSSPEENTQSKSKYCLKINRPIGEPNDTQDDEVEEIGDHDDSPSDVTVE 178 Query: 508 IEDPSKEETKTPSGKVTRELKPPIVLEALAASGLRSLR-YAREVDGLGKVVALDNDKASV 684 PS+E+ K+P+ T +L+ L + +R + Y +EV+ + + D + Sbjct: 179 GTPPSQEDGKSPT---TTLRVQEAILKELGSEEVRKVNCYGQEVESMETTESKDLGSQTP 235 Query: 685 EACKRN 702 +A N Sbjct: 236 QALTFN 241
>Q321Y0:RSMF_SHIBS Ribosomal RNA small subunit methyltransferase F - Shigella boydii| serotype 4 (strain Sb227) Length = 479 Score = 32.3 bits (72), Expect = 8.2 Identities = 23/80 (28%), Positives = 38/80 (47%) Frame = +1 Query: 571 PPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHL 750 P V++ AA G ++ + A ++ G ++A + + V+ NI G IS V Sbjct: 118 PQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCG---ISNVALTH 174 Query: 751 ADARVYMLTHPKEFDVVDLD 810 D RV+ P+ FD + LD Sbjct: 175 FDGRVFGAAVPEMFDAILLD 194
>Q8FGS9:RSMF_ECOL6 Ribosomal RNA small subunit methyltransferase F - Escherichia coli| O6 Length = 479 Score = 32.3 bits (72), Expect = 8.2 Identities = 23/80 (28%), Positives = 38/80 (47%) Frame = +1 Query: 571 PPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHL 750 P V++ AA G ++ + A ++ G ++A + + V+ NI G IS V Sbjct: 118 PQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCG---ISNVALTH 174 Query: 751 ADARVYMLTHPKEFDVVDLD 810 D RV+ P+ FD + LD Sbjct: 175 FDGRVFGAAVPEMFDAILLD 194
>Q0TGZ7:RSMF_ECOL5 Ribosomal RNA small subunit methyltransferase F - Escherichia coli| O6:K15:H31 (strain 536 / UPEC) Length = 479 Score = 32.3 bits (72), Expect = 8.2 Identities = 23/80 (28%), Positives = 38/80 (47%) Frame = +1 Query: 571 PPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHL 750 P V++ AA G ++ + A ++ G ++A + + V+ NI G IS V Sbjct: 118 PQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCG---ISNVALTH 174 Query: 751 ADARVYMLTHPKEFDVVDLD 810 D RV+ P+ FD + LD Sbjct: 175 FDGRVFGAAVPEMFDAILLD 194
>Q8XCL9:RSMF_ECO57 Ribosomal RNA small subunit methyltransferase F - Escherichia coli| O157:H7 Length = 479 Score = 32.3 bits (72), Expect = 8.2 Identities = 23/80 (28%), Positives = 38/80 (47%) Frame = +1 Query: 571 PPIVLEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEAHL 750 P V++ AA G ++ + A ++ G ++A + + V+ NI G IS V Sbjct: 118 PQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCG---ISNVALTH 174 Query: 751 ADARVYMLTHPKEFDVVDLD 810 D RV+ P+ FD + LD Sbjct: 175 FDGRVFGAALPEMFDAILLD 194
>Q5R5X0:PININ_PONPY Pinin - Pongo pygmaeus (Orangutan)| Length = 719 Score = 32.3 bits (72), Expect = 8.2 Identities = 23/86 (26%), Positives = 43/86 (50%) Frame = +1 Query: 337 VAKRKEEHEELMNKRNNKSHKKGNQIETHVVNGDTALTQHDETDVVHEKEPNQATNEIED 516 VA+R+EE EE N+ N+ ++ + E + A+ +D E+E + EIE Sbjct: 312 VAQREEELEETGNQHNDVEIEEAGEEEEKEI----AIVH---SDAEKEQEEEEQKQEIEV 364 Query: 517 PSKEETKTPSGKVTRELKPPIVLEAL 594 +EET+ + ++ +P V++ L Sbjct: 365 KMEEETEVRESEKQQDSQPEEVMDVL 390
>Q92047:PIMT_DANRE Protein-L-isoaspartate(D-aspartate) O-methyltransferase - Danio| rerio (Zebrafish) (Brachydanio rerio) Length = 228 Score = 32.3 bits (72), Expect = 8.2 Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 2/63 (3%) Frame = +1 Query: 583 LEALAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVIS--KVEAHLAD 756 L+ + SG+ S+ ++R V GKV+ +D+ K VE N+K + S+I+ +++ + D Sbjct: 83 LDVGSGSGILSVCFSRMVGPTGKVIGIDHIKELVEDSIANVKKDDPSLITSGRIKLIVGD 142 Query: 757 ARV 765 R+ Sbjct: 143 GRM 145
>Q60974:NCOR1_MOUSE Nuclear receptor corepressor 1 - Mus musculus (Mouse)| Length = 2453 Score = 32.3 bits (72), Expect = 8.2 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -2 Query: 1632 DWMVFHPAAHDVPNNIPRGIRLQPERVT 1549 +W V PA H V N+P G+RL R T Sbjct: 1015 EWEVLQPAPHQVITNLPEGVRLPTTRPT 1042
>O75376:NCOR1_HUMAN Nuclear receptor corepressor 1 - Homo sapiens (Human)| Length = 2440 Score = 32.3 bits (72), Expect = 8.2 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -2 Query: 1632 DWMVFHPAAHDVPNNIPRGIRLQPERVT 1549 +W V PA H V N+P G+RL R T Sbjct: 1003 EWEVLQPAPHQVITNLPEGVRLPTTRPT 1030
>Q75A83:MRD1_ASHGO Multiple RNA-binding domain-containing protein 1 - Ashbya gossypii| (Yeast) (Eremothecium gossypii) Length = 838 Score = 32.3 bits (72), Expect = 8.2 Identities = 37/143 (25%), Positives = 56/143 (39%), Gaps = 18/143 (12%) Frame = +1 Query: 202 EDKLKGFEIKKEGEAEILMLNSNAVFFNPVQVHNRDMSIAVLRTFVAKRKEEHEELMNKR 381 E LK +KK+ E + + F N+D AVL + AK E +L++ Sbjct: 387 EFDLKNLPLKKQRELKRKATAAQQTFSWNSLFMNQD---AVLSSVAAKLGMEKSQLIDPE 443 Query: 382 NNKSHKKGNQIETHVVNGDT------------------ALTQHDETDVVHEKEPNQATNE 507 N+ S K E HV+ GD +T+ D+ ++ + P+ T E Sbjct: 444 NSGSAVKQALAEAHVI-GDVRKYFEARGVDLTQFEKFKKVTERDDRIILVKNFPHGTTRE 502 Query: 508 IEDPSKEETKTPSGKVTRELKPP 576 E P GK+ R L PP Sbjct: 503 ----ELAELFLPFGKIERMLMPP 521
>Q12114:CHS5_YEAST Chitin biosynthesis protein CHS5 - Saccharomyces cerevisiae| (Baker's yeast) Length = 671 Score = 32.3 bits (72), Expect = 8.2 Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 1/111 (0%) Frame = +1 Query: 415 ETHVVNGDTALTQHDETDVVHEKEPNQATNEIE-DPSKEETKTPSGKVTRELKPPIVLEA 591 ET+ D A +H E D+ E EP AT + +PS E+ K P K + + Sbjct: 543 ETNEFTTDIASPRHQEEDIELEAEPKDATESVAVEPSNEDVK-PEEKGSEAEDDINNVSK 601 Query: 592 LAASGLRSLRYAREVDGLGKVVALDNDKASVEACKRNIKFNGASVISKVEA 744 AASG + E + A+ ++ + EA + N V+S EA Sbjct: 602 EAASGESTTHQKTEASASLESSAVTEEQETTEA-----EVNTDDVLSTKEA 647
>Q8N988:ZN557_HUMAN Zinc finger protein 557 - Homo sapiens (Human)| Length = 423 Score = 27.7 bits (60), Expect(2) = 8.8 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +1 Query: 1255 ECSDCGKKFNV 1287 ECSDCGK FNV Sbjct: 370 ECSDCGKSFNV 380 Score = 23.1 bits (48), Expect(2) = 8.8 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Frame = +1 Query: 1141 YVYQCVGCDSFHLQSLGRTVTK-NNSVKYAPGIGPVVPQECSDCGKKF 1281 Y Y+C C GRT + +N ++ P C++CGK F Sbjct: 311 YPYECHDC--------GRTFRRRSNLTQHIRTHTGEKPYTCNECGKSF 350 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 365,585,095 Number of extensions: 8228361 Number of successful extensions: 27829 Number of sequences better than 10.0: 55 Number of HSP's gapped: 27708 Number of HSP's successfully gapped: 59 Length of query: 716 Length of database: 100,686,439 Length adjustment: 121 Effective length of query: 595 Effective length of database: 67,496,744 Effective search space: 40160562680 Effective search space used: 40160562680 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)