ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf53a23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001058026.1| Oryza sativa (japonica cultivar-group) Os03g0786700 (Os03g0786700) mRNA, complete cds Length = 2139 Score = 888 bits (448), Expect = 0.0 Identities = 1098/1312 (83%), Gaps = 2/1312 (0%) Strand = Plus / Plus Query: 503 atgaaatagaagatccgtcaaaagaagaaacgaagacaccttccgggaaagtaaccagag 562 |||||| |||||||| ||||| ||||| ||| ||||||||||| |||||||| |||||| Sbjct: 492 atgaaacagaagatctgtcaacagaagcaacaaagacaccttcgcggaaagtagccagag 551 Query: 563 agcttaagccaccaattgttcttgaggcgttagctgcttctgggttgaggtctctccgtt 622 |||||||| ||||| ||||||||||||| || ||||||||||||||||| ||| |||||| Sbjct: 552 agcttaaggcaccagttgttcttgaggctttggctgcttctgggttgagatctatccgtt 611 Query: 623 atgctcgtgaagttgatggattaggaaaggtagttgctctggacaatgataaagcttctg 682 ||||||||||| | || | |||| |||||| || |||||||||| ||||||||||| | Sbjct: 612 atgctcgtgaaatagacgtgttagaaaaggtggtcgctctggacattgataaagcttgta 671 Query: 683 ttgaagcttgcaagaggaacatcaagttcaatggggcttctgttattagcaaggtggaag 742 |||||||||||||| |||| || ||||| ||||| ||||||| ||| || ||| | || Sbjct: 672 ttgaagcttgcaagcggaatataaagtttaatggtgcttctgctatgagtaagatcgagc 731 Query: 743 ctcacttggctgatgctcgagtttacatgctcactcatccaaaagaatttgatgtggttg 802 |||| ||| |||||||||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 732 ctcatttgactgatgctcgagtttatatgctcacacatccaaaagagtttgatgtggttg 791 Query: 803 atcttgacccctatgggtcaccatctgtattcctcgactcagctgtacaggctgttgctg 862 || ||||||||||||| |||| ||| | ||||| || || ||||||||||||||||||| Sbjct: 792 atattgacccctatggagcaccttctattttccttgattcggctgtacaggctgttgctg 851 Query: 863 atggtggactattaatgtgtacagccactgatctggcagtactttgtggaaccaatggag 922 ||||||| ||||||||||| || ||||||||| |||| || || ||||| | ||||| | Sbjct: 852 atggtgggctattaatgtgcactgccactgatatggcggttctatgtgggccaaatggtg 911 Query: 923 aagtttgctactccaagtatggttcctacccagtcagaggcaagtattgccatgaaatgg 982 |||||||| ||||||||||||||||||| ||| || ||| |||||| ||||||||||| Sbjct: 912 aagtttgccactccaagtatggttcctatccaaccaaagggaagtataaccatgaaatgg 971 Query: 983 ctttgagaatcctccttgccagtatcgagagccatgcaaatcggtataagagatatattg 1042 ||||| ||||||||||||||||||| ||||| ||||||||||| || || ||||||||| Sbjct: 972 ctttgcgaatcctccttgccagtattgagagtcatgcaaatcgatacaaacgatatattg 1031 Query: 1043 tgcctgttctctctgtgtttatggatttctatgtccgtgtgtttgttcgagtattcactt 1102 |||||||||||||||||| |||||||||||| ||||||| ||||| |||||||| |||| Sbjct: 1032 tgcctgttctctctgtgtctatggatttctacatccgtgtttttgtccgagtatttactt 1091 Query: 1103 ctgcaagtgaaataaagaatgctccacttaaactttcttatgtatatcaatgtgtcggct 1162 |||||| ||| ||||||| |||| | || ||||||||||||||||||||||| || | Sbjct: 1092 ctgcaaacgaagtaaagaagactcctcaaaagctttcttatgtatatcaatgtgttggtt 1151 Query: 1163 gtgattctttccatcttcagtcccttgggaggactgtcactaagaataatagcgtgaagt 1222 | ||||| || |||||||||| ||||| ||||| | |||||||| || || |||||| Sbjct: 1152 gcgattcatttcatcttcagtgtcttggtaggaccataactaagaacaacagtgtgaaga 1211 Query: 1223 atgcgcctggtattggacctgttgttcctcaagaatgtagcgactgtggaaagaaattta 1282 ||||||||| ||||| ||||||||||||||||| || || | |||||| |||||||||| Sbjct: 1212 atgcgcctgccattgggcctgttgttcctcaagagtgcagtgcctgtgggaagaaattta 1271 Query: 1283 atgtgggcgggccaatatattccgctcctattcatgatcaagattgggtactttctacgc 1342 | | || |||||||||| || |||||||| ||||| ||||| |||||| | ||||| Sbjct: 1272 ctataggagggccaatatggtctgctcctatacatgaccaagagtgggtagtgtctactt 1331 Query: 1343 tgacagatgttaggccaatgaaggatagatatcctgcatacaacaaaattacttcagttc 1402 ||||||| |||| | ||||||||||||||||||||||||| | || || |||||||||| Sbjct: 1332 tgacagaagttaagtcaatgaaggatagatatcctgcatatgataagataacttcagttc 1391 Query: 1403 taactactgtatcagaggaattgcatgacattccattattttttagtctccataacatat 1462 | ||||| |||||||||| || |||||||| ||||| || || |||||||| ||||||| Sbjct: 1392 tgactaccatatcagaggagttacatgacatcccattgttcttcagtctccacaacatat 1451 Query: 1463 ctgggactgtgaagtgcacatcaccatctgcagttatgttccggtcagcagttataaatg 1522 || | ||| || |||||||| ||||||||||| ||||||| || ||||| |||||| Sbjct: 1452 gtgctaatgttaaatgcacatctccatctgcagtattgttccgatctgcagtcctaaatg 1511 Query: 1523 caggatatcagatatcaagcagtcactgt-aacccgctcgggctgaagtctgatgccccg 1581 | || |||| ||| || |||| || ||| || || || || || || |||||||||| Sbjct: 1512 cgggttatcggatttctagcacaca-tgtgaatccacttggactaaaaactgatgcccct 1570 Query: 1582 tgggatgttatttgggacatcatgcgctgctgggtgaaaaaccatccaatcaaggaacag 1641 |||||||||||||||||||||||||||||||||||||| || ||||| | |||||||| Sbjct: 1571 tgggatgttatttgggacatcatgcgctgctgggtgaagaatcatcctgtaaaggaacaa 1630 Query: 1642 ccgcgtgattctgcaggcactgcaatcctttctaaatctccacagctagaagcaaatttc 1701 || | ||| |||| ||| || || |||||||| ||||| || |||| |||||||||||| Sbjct: 1631 ccacatgactctgtagggacagcgatcctttcaaaatcacccaagcttgaagcaaatttc 1690 Query: 1702 tctagagcagttgctgccctcagcaaggctcagatgaagaaggtgaatcggttccttcca 1761 |||||||| | |||||||||||||| |||||| |||||||| || ||||||||||| Sbjct: 1691 tctagagcggctgctgccctcagcagggctcaagcaaagaaggtcaagcggttccttccg 1750 Query: 1762 aacccagaaagtcactggggtccaaaggtcagggcaggtcggagaattacaa 1813 ||||||||| |||| |||||||| || |||| || ||||||| ||||||| Sbjct: 1751 aacccagaacgtcattggggtcccaaaatcagagctggtcggaagattacaa 1802 Score = 71.9 bits (36), Expect = 9e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 274 gtgttcttcaatcccgtgcaggtgcacaacagagacatgtccattgctgtgttaaggaca 333 ||||||| ||||||||||||||| ||||| ||||| ||||| ||||| | |||||||| Sbjct: 263 gtgttctacaatcccgtgcaggtccacaatagagatatgtcagttgctcttttaaggact 322 Query: 334 tttgttgccaagcgcaaggaagaacatgaggaactgatgaataa 377 || |||||||||| ||||||||||| ||| | ||||| |||| Sbjct: 323 ttcattgccaagcgtgaggaagaacataaggcaatgatggataa 366
>dbj|AK067936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128E07, full insert sequence Length = 2139 Score = 856 bits (432), Expect = 0.0 Identities = 1095/1312 (83%), Gaps = 3/1312 (0%) Strand = Plus / Plus Query: 503 atgaaatagaagatccgtcaaaagaagaaacgaagacaccttccgggaaagtaaccagag 562 |||||| |||||||| ||||| ||||| ||| ||||||||||| || ||||| |||||| Sbjct: 493 atgaaacagaagatctgtcaacagaagcaacaaagacaccttcgcgggaagtagccagag 552 Query: 563 agcttaagccaccaattgttcttgaggcgttagctgcttctgggttgaggtctctccgtt 622 |||||||| ||||| ||||||||||||| || ||||||||||||||||| ||| |||||| Sbjct: 553 agcttaaggcaccagttgttcttgaggctttggctgcttctgggttgagatctatccgtt 612 Query: 623 atgctcgtgaagttgatggattaggaaaggtagttgctctggacaatgataaagcttctg 682 ||||||||||| | || | |||| |||||| || |||||||||| ||||||||||| | Sbjct: 613 atgctcgtgaaatagacgtgttagaaaaggtggtcgctctggacattgataaagcttgta 672 Query: 683 ttgaagcttgcaagaggaacatcaagttcaatggggcttctgttattagcaaggtggaag 742 |||||||||||||| |||| || ||||| ||||| ||||||| ||| || ||| | || Sbjct: 673 ttgaagcttgcaagcggaatataaagtttaatggtgcttctgctatgagtaagatcgagc 732 Query: 743 ctcacttggctgatgctcgagtttacatgctcactcatccaaaagaatttgatgtggttg 802 |||| ||| |||||||||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct: 733 ctcatttgactgatgctcgagtttatatgctcacacatccaaaagagtttgatgtggttg 792 Query: 803 atcttgacccctatgggtcaccatctgtattcctcgactcagctgtacaggctgttgctg 862 || ||||||||||||| |||| ||| | ||||| || || ||||||||||||||||||| Sbjct: 793 atattgacccctatggagcaccttctattttccttgattcggctgtacaggctgttgctg 852 Query: 863 atggtggactattaatgtgtacagccactgatctggcagtactttgtggaaccaatggag 922 ||||||| ||||||||||| || ||||||||| |||| || || ||||| | ||||| | Sbjct: 853 atggtgggctattaatgtgcactgccactgatatggcggttctatgtgggccaaatggtg 912 Query: 923 aagtttgctactccaagtatggttcctacccagtcagaggcaagtattgccatgaaatgg 982 |||||||| ||||||||||||||||||| ||| || ||| |||||| ||||||||||| Sbjct: 913 aagtttgccactccaagtatggttcctatccaaccaaagggaagtataaccatgaaatgg 972 Query: 983 ctttgagaatcctccttgccagtatcgagagccatgcaaatcggtataagagatatattg 1042 ||||| ||||||||||||||||||| ||||| ||||||||||| || || ||||||||| Sbjct: 973 ctttgcgaatcctccttgccagtattgagagtcatgcaaatcgatacaaacgatatattg 1032 Query: 1043 tgcctgttctctctgtgtttatggatttctatgtccgtgtgtttgttcgagtattcactt 1102 |||||||||||||||||| | |||||||||| ||||||| ||||| |||||| | |||| Sbjct: 1033 tgcctgttctctctgtgtct-tggatttctacatccgtgtttttgtccgagtacttactt 1091 Query: 1103 ctgcaagtgaaataaagaatgctccacttaaactttcttatgtatatcaatgtgtcggct 1162 |||||| ||| ||||||| |||| | || ||||||||||||||||||||||| || | Sbjct: 1092 ctgcaaacgaagtaaagaagactcctcaaaagctttcttatgtatatcaatgtgttggtt 1151 Query: 1163 gtgattctttccatcttcagtcccttgggaggactgtcactaagaataatagcgtgaagt 1222 | ||||| || |||||||||| ||||| ||||| | |||||||| || || |||||| Sbjct: 1152 gcgattcatttcatcttcagtgtcttggtaggaccataactaagaacaacagtgtgaaga 1211 Query: 1223 atgcgcctggtattggacctgttgttcctcaagaatgtagcgactgtggaaagaaattta 1282 ||||||||| ||||| ||||||||||||||||| || || | |||||| |||||||||| Sbjct: 1212 atgcgcctgccattgggcctgttgttcctcaagagtgcagtgcctgtgggaagaaattta 1271 Query: 1283 atgtgggcgggccaatatattccgctcctattcatgatcaagattgggtactttctacgc 1342 | | || |||||||||| || |||||||| ||||| ||||| |||||| | ||||| Sbjct: 1272 ctataggagggccaatatggtctgctcctatacatgaccaagagtgggtagtgtctactt 1331 Query: 1343 tgacagatgttaggccaatgaaggatagatatcctgcatacaacaaaattacttcagttc 1402 ||||||| |||| | ||||||||||||||||||||||||| | || || |||||||||| Sbjct: 1332 tgacagaagttaagtcaatgaaggatagatatcctgcatatgataagataacttcagttc 1391 Query: 1403 taactactgtatcagaggaattgcatgacattccattattttttagtctccataacatat 1462 | ||||| |||||||||| || |||||||| ||||| || || |||||||| ||||||| Sbjct: 1392 tgactaccatatcagaggagttacatgacatcccattgttcttcagtctccacaacatat 1451 Query: 1463 ctgggactgtgaagtgcacatcaccatctgcagttatgttccggtcagcagttataaatg 1522 || | ||| || |||||||| ||||||||||| ||||||| || ||||| |||||| Sbjct: 1452 gtgctaatgttaaatgcacatctccatctgcagtattgttccgatctgcagtcctaaatg 1511 Query: 1523 caggatatcagatatcaagcagtcactgt-aacccgctcgggctgaagtctgatgccccg 1581 | || |||| ||| || |||| || ||| || || || || || || |||||||||| Sbjct: 1512 cgggttatcggatttctagcacaca-tgtgaatccacttggactaaaaactgatgcccct 1570 Query: 1582 tgggatgttatttgggacatcatgcgctgctgggtgaaaaaccatccaatcaaggaacag 1641 |||||||||||||||||||||||||||||||||||||| || ||||| | |||||||| Sbjct: 1571 tgggatgttatttgggacatcatgcgctgctgggtgaagaatcatcctgtaaaggaacaa 1630 Query: 1642 ccgcgtgattctgcaggcactgcaatcctttctaaatctccacagctagaagcaaatttc 1701 || | ||| |||| ||| || || |||||||| ||||| || |||| |||||||||||| Sbjct: 1631 ccacatgactctgtagggacagcgatcctttcaaaatcacccaagcttgaagcaaatttc 1690 Query: 1702 tctagagcagttgctgccctcagcaaggctcagatgaagaaggtgaatcggttccttcca 1761 |||||||| | |||||||||||||| |||||| |||||||| || ||||||||||| Sbjct: 1691 tctagagcggctgctgccctcagcagggctcaagcaaagaaggtcaagcggttccttccg 1750 Query: 1762 aacccagaaagtcactggggtccaaaggtcagggcaggtcggagaattacaa 1813 ||||||||| |||| |||||||| || |||| || ||||||| ||||||| Sbjct: 1751 aacccagaacgtcattggggtcccaaaatcagagctggtcggaagattacaa 1802 Score = 71.9 bits (36), Expect = 9e-09 Identities = 87/104 (83%) Strand = Plus / Plus Query: 274 gtgttcttcaatcccgtgcaggtgcacaacagagacatgtccattgctgtgttaaggaca 333 ||||||| ||||||||||||||| ||||| ||||| ||||| ||||| | |||||||| Sbjct: 264 gtgttctacaatcccgtgcaggtccacaatagagatatgtcagttgctcttttaaggact 323 Query: 334 tttgttgccaagcgcaaggaagaacatgaggaactgatgaataa 377 || |||||||||| ||||||||||| ||| | ||||| |||| Sbjct: 324 ttcattgccaagcgtgaggaagaacataaggcaatgatggataa 367
>ref|NM_121586.2| Arabidopsis thaliana RNA binding / S-adenosylmethionine-dependent methyltransferase/ tRNA (guanine-N2-)-methyltransferase (AT5G15810) mRNA, complete cds Length = 2313 Score = 190 bits (96), Expect = 1e-44 Identities = 459/580 (79%) Strand = Plus / Plus Query: 752 ctgatgctcgagtttacatgctcactcatccaaaagaatttgatgtggttgatcttgacc 811 |||||||||| ||| ||||||||| || |||||||| |||||||||||||||||||||| Sbjct: 836 ctgatgctcgtgttcacatgctcagccacccaaaagattttgatgtggttgatcttgacc 895 Query: 812 cctatgggtcaccatctgtattcctcgactcagctgtacaggctgttgctgatggtggac 871 | ||||| | || ||| | ||||| ||||||||||| || | ||||| |||||||| Sbjct: 896 catatggtgcgccgtctattttccttgactcagctgttcaatcagttgccgatggtggtt 955 Query: 872 tattaatgtgtacagccactgatctggcagtactttgtggaaccaatggagaagtttgct 931 | | ||||||||||| ||||| ||||||| | |||||| | || || || || |||| Sbjct: 956 tgctgatgtgtacagcaactgacatggcagtgttatgtggagctaacggcgaggtctgct 1015 Query: 932 actccaagtatggttcctacccagtcagaggcaagtattgccatgaaatggctttgagaa 991 | ||||| ||||| || || ||| | | ||| || ||||| ||||| ||||||||||| | Sbjct: 1016 attccaaatatggctcttatccactgaaagggaaatattgtcatgagatggctttgagga 1075 Query: 992 tcctccttgccagtatcgagagccatgcaaatcggtataagagatatattgtgcctgttc 1051 ||||||| ||||| |||||||||||||||||||| || ||| | |||||||| ||||||| Sbjct: 1076 tcctcctcgccagcatcgagagccatgcaaatcgctacaagcggtatattgttcctgttc 1135 Query: 1052 tctctgtgtttatggatttctatgtccgtgtgtttgttcgagtattcacttctgcaagtg 1111 | || || ||||||||||| || ||||| ||||| || || | |||||| || |||| Sbjct: 1136 tatcggtccaaatggatttctacgttcgtgtttttgtccgcgtctacacttcggcgagtg 1195 Query: 1112 aaataaagaatgctccacttaaactttcttatgtatatcaatgtgtcggctgtgattctt 1171 ||| |||||| ||||||| || || || ||||| || ||||| | || |||||||| | Sbjct: 1196 caatgaagaatactccactaaagctctcatatgtctaccaatgcattggttgtgattcct 1255 Query: 1172 tccatcttcagtcccttgggaggactgtcactaagaataatagcgtgaagtatgcgcctg 1231 | ||||||||||| |||| || || || |||||||||| || |||| ||| |||| Sbjct: 1256 ttcatcttcagtctgttggaagatctctccctaagaataacagtgtgagatatctacctg 1315 Query: 1232 gtattggacctgttgttcctcaagaatgtagcgactgtggaaagaaatttaatgtgggcg 1291 | |||| |||||||||||||| || || | | ||||||||||||| |||| |||| | Sbjct: 1316 gagttggtcctgttgttcctcaggattgcactcattgtggaaagaaatataatatgggtg 1375 Query: 1292 ggccaatatattccgctcctattcatgatcaagattgggt 1331 | ||||||| || ||||| || || |||||||| ||||| Sbjct: 1376 gaccaatatggtctgctccaatccacgatcaagaatgggt 1415 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1589 ttatttgggacatcatgcgctgctgggtgaaaaaccatcc 1628 |||| |||||||||||||| |||||||||||||| ||||| Sbjct: 1673 ttatctgggacatcatgcggtgctgggtgaaaaatcatcc 1712
>gb|AY080697.1| Arabidopsis thaliana putative N2,N2-dimethylguanine tRNA methyltransferase (At5g15810) mRNA, partial cds Length = 2267 Score = 190 bits (96), Expect = 1e-44 Identities = 459/580 (79%) Strand = Plus / Plus Query: 752 ctgatgctcgagtttacatgctcactcatccaaaagaatttgatgtggttgatcttgacc 811 |||||||||| ||| ||||||||| || |||||||| |||||||||||||||||||||| Sbjct: 774 ctgatgctcgtgttcacatgctcagccacccaaaagattttgatgtggttgatcttgacc 833 Query: 812 cctatgggtcaccatctgtattcctcgactcagctgtacaggctgttgctgatggtggac 871 | ||||| | || ||| | ||||| ||||||||||| || | ||||| |||||||| Sbjct: 834 catatggtgcgccgtctattttccttgactcagctgttcaatcagttgccgatggtggtt 893 Query: 872 tattaatgtgtacagccactgatctggcagtactttgtggaaccaatggagaagtttgct 931 | | ||||||||||| ||||| ||||||| | |||||| | || || || || |||| Sbjct: 894 tgctgatgtgtacagcaactgacatggcagtgttatgtggagctaacggcgaggtctgct 953 Query: 932 actccaagtatggttcctacccagtcagaggcaagtattgccatgaaatggctttgagaa 991 | ||||| ||||| || || ||| | | ||| || ||||| ||||| ||||||||||| | Sbjct: 954 attccaaatatggctcttatccactgaaagggaaatattgtcatgagatggctttgagga 1013 Query: 992 tcctccttgccagtatcgagagccatgcaaatcggtataagagatatattgtgcctgttc 1051 ||||||| ||||| |||||||||||||||||||| || ||| | |||||||| ||||||| Sbjct: 1014 tcctcctcgccagcatcgagagccatgcaaatcgctacaagcggtatattgttcctgttc 1073 Query: 1052 tctctgtgtttatggatttctatgtccgtgtgtttgttcgagtattcacttctgcaagtg 1111 | || || ||||||||||| || ||||| ||||| || || | |||||| || |||| Sbjct: 1074 tatcggtccaaatggatttctacgttcgtgtttttgtccgcgtctacacttcggcgagtg 1133 Query: 1112 aaataaagaatgctccacttaaactttcttatgtatatcaatgtgtcggctgtgattctt 1171 ||| |||||| ||||||| || || || ||||| || ||||| | || |||||||| | Sbjct: 1134 caatgaagaatactccactaaagctctcatatgtctaccaatgcattggttgtgattcct 1193 Query: 1172 tccatcttcagtcccttgggaggactgtcactaagaataatagcgtgaagtatgcgcctg 1231 | ||||||||||| |||| || || || |||||||||| || |||| ||| |||| Sbjct: 1194 ttcatcttcagtctgttggaagatctctccctaagaataacagtgtgagatatctacctg 1253 Query: 1232 gtattggacctgttgttcctcaagaatgtagcgactgtggaaagaaatttaatgtgggcg 1291 | |||| |||||||||||||| || || | | ||||||||||||| |||| |||| | Sbjct: 1254 gagttggtcctgttgttcctcaggattgcactcattgtggaaagaaatataatatgggtg 1313 Query: 1292 ggccaatatattccgctcctattcatgatcaagattgggt 1331 | ||||||| || ||||| || || |||||||| ||||| Sbjct: 1314 gaccaatatggtctgctccaatccacgatcaagaatgggt 1353 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 1589 ttatttgggacatcatgcgctgctgggtgaaaaaccatcc 1628 |||| |||||||||||||| |||||||||||||| ||||| Sbjct: 1611 ttatctgggacatcatgcggtgctgggtgaaaaatcatcc 1650
>ref|NM_111099.3| Arabidopsis thaliana RNA binding / S-adenosylmethionine-dependent methyltransferase/ tRNA (guanine-N2-)-methyltransferase (AT3G02320) mRNA, complete cds Length = 2129 Score = 178 bits (90), Expect = 5e-41 Identities = 321/398 (80%) Strand = Plus / Plus Query: 784 aaagaatttgatgtggttgatcttgacccctatgggtcaccatctgtattcctcgactca 843 |||||||||||||||||||||||||| || ||||| ||||||||| | ||||| ||||| Sbjct: 737 aaagaatttgatgtggttgatcttgatccatatggatcaccatctattttccttgactcg 796 Query: 844 gctgtacaggctgttgctgatggtggactattaatgtgtacagccactgatctggcagta 903 ||| | || | || | ||||||||| | ||||||||||||| ||||| ||||||| Sbjct: 797 gctattcaatcagtcacggatggtggattgctaatgtgtacagcaactgacatggcagtg 856 Query: 904 ctttgtggaaccaatggagaagtttgctactccaagtatggttcctacccagtcagaggc 963 | ||||| || || ||||||||||| ||||| |||||||| |||||| | |||| Sbjct: 857 ttatgtggtggtaacggtgaagtttgctattccaaatatggttcttacccattgagagcg 916 Query: 964 aagtattgccatgaaatggctttgagaatcctccttgccagtatcgagagccatgcaaat 1023 |||||||| ||||| ||||||||| | |||||||||||||| ||||||||||||||||| Sbjct: 917 aagtattgtcatgagatggctttgcggatcctccttgccagcatcgagagccatgcaaac 976 Query: 1024 cggtataagagatatattgtgcctgttctctctgtgtttatggatttctatgtccgtgtg 1083 || || ||| | |||||||| || || || |||||| |||||||||||||| ||||| Sbjct: 977 cgctacaagcggtatattgttccggtgctatctgtgcaaatggatttctatgttcgtgtt 1036 Query: 1084 tttgttcgagtattcacttctgcaagtgaaataaagaatgctccacttaaactttcttat 1143 ||||| || || | ||| || || |||| ||| ||||| ||||| | || || ||||| Sbjct: 1037 tttgtccgcgtttacacctcggcgagtgcaatgaagaacactccattgaagctctcttac 1096 Query: 1144 gtatatcaatgtgtcggctgtgattctttccatcttca 1181 ||||||||||| | ||||||||||| || |||||||| Sbjct: 1097 gtatatcaatgcattggctgtgattcatttcatcttca 1134 Score = 50.1 bits (25), Expect = 0.034 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1588 gttatttgggacatcatgcgctgctgggtgaaaaaccatcc 1628 ||||| |||||||| ||||||||||||||||| || ||||| Sbjct: 1541 gttatctgggacattatgcgctgctgggtgaagaatcatcc 1581 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Plus Query: 292 caggtgcacaacagagacatgtccattgctgt 323 |||||| |||| |||||||||||||||||||| Sbjct: 257 caggtgaacaatagagacatgtccattgctgt 288
>dbj|AK175448.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-87-M20 Length = 2057 Score = 178 bits (90), Expect = 5e-41 Identities = 321/398 (80%) Strand = Plus / Plus Query: 784 aaagaatttgatgtggttgatcttgacccctatgggtcaccatctgtattcctcgactca 843 |||||||||||||||||||||||||| || ||||| ||||||||| | ||||| ||||| Sbjct: 737 aaagaatttgatgtggttgatcttgatccatatggatcaccatctattttccttgactcg 796 Query: 844 gctgtacaggctgttgctgatggtggactattaatgtgtacagccactgatctggcagta 903 ||| | || | || | ||||||||| | ||||||||||||| ||||| ||||||| Sbjct: 797 gctattcaatcagtcacggatggtggattgctaatgtgtacagcaactgacatggcagtg 856 Query: 904 ctttgtggaaccaatggagaagtttgctactccaagtatggttcctacccagtcagaggc 963 | ||||| || || ||||||||||| ||||| |||||||| |||||| | |||| Sbjct: 857 ttatgtggtggtaacggtgaagtttgctattccaaatatggttcttacccattgagagcg 916 Query: 964 aagtattgccatgaaatggctttgagaatcctccttgccagtatcgagagccatgcaaat 1023 |||||||| ||||| ||||||||| | |||||||||||||| ||||||||||||||||| Sbjct: 917 aagtattgtcatgagatggctttgcggatcctccttgccagcatcgagagccatgcaaac 976 Query: 1024 cggtataagagatatattgtgcctgttctctctgtgtttatggatttctatgtccgtgtg 1083 || || ||| | |||||||| || || || |||||| |||||||||||||| ||||| Sbjct: 977 cgctacaagcggtatattgttccggtgctatctgtgcaaatggatttctatgttcgtgtt 1036 Query: 1084 tttgttcgagtattcacttctgcaagtgaaataaagaatgctccacttaaactttcttat 1143 ||||| || || | ||| || || |||| ||| ||||| ||||| | || || ||||| Sbjct: 1037 tttgtccgcgtttacacctcggcgagtgcaatgaagaacactccattgaagctctcttac 1096 Query: 1144 gtatatcaatgtgtcggctgtgattctttccatcttca 1181 ||||||||||| | ||||||||||| || |||||||| Sbjct: 1097 gtatatcaatgcattggctgtgattcatttcatcttca 1134 Score = 50.1 bits (25), Expect = 0.034 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1588 gttatttgggacatcatgcgctgctgggtgaaaaaccatcc 1628 ||||| |||||||| ||||||||||||||||| || ||||| Sbjct: 1541 gttatctgggacattatgcgctgctgggtgaagaatcatcc 1581 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Plus Query: 292 caggtgcacaacagagacatgtccattgctgt 323 |||||| |||| |||||||||||||||||||| Sbjct: 257 caggtgaacaatagagacatgtccattgctgt 288
>dbj|AK175413.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-85-A05 Length = 2057 Score = 178 bits (90), Expect = 5e-41 Identities = 321/398 (80%) Strand = Plus / Plus Query: 784 aaagaatttgatgtggttgatcttgacccctatgggtcaccatctgtattcctcgactca 843 |||||||||||||||||||||||||| || ||||| ||||||||| | ||||| ||||| Sbjct: 737 aaagaatttgatgtggttgatcttgatccatatggatcaccatctattttccttgactcg 796 Query: 844 gctgtacaggctgttgctgatggtggactattaatgtgtacagccactgatctggcagta 903 ||| | || | || | ||||||||| | ||||||||||||| ||||| ||||||| Sbjct: 797 gctattcaatcagtcacggatggtggattgctaatgtgtacagcaactgacatggcagtg 856 Query: 904 ctttgtggaaccaatggagaagtttgctactccaagtatggttcctacccagtcagaggc 963 | ||||| || || ||||||||||| ||||| |||||||| |||||| | |||| Sbjct: 857 ttatgtggtggtaacggtgaagtttgctattccaaatatggttcttacccattgagagcg 916 Query: 964 aagtattgccatgaaatggctttgagaatcctccttgccagtatcgagagccatgcaaat 1023 |||||||| ||||| ||||||||| | |||||||||||||| ||||||||||||||||| Sbjct: 917 aagtattgtcatgagatggctttgcggatcctccttgccagcatcgagagccatgcaaac 976 Query: 1024 cggtataagagatatattgtgcctgttctctctgtgtttatggatttctatgtccgtgtg 1083 || || ||| | |||||||| || || || |||||| |||||||||||||| ||||| Sbjct: 977 cgctacaagcggtatattgttccggtgctatctgtgcaaatggatttctatgttcgtgtt 1036 Query: 1084 tttgttcgagtattcacttctgcaagtgaaataaagaatgctccacttaaactttcttat 1143 ||||| || || | ||| || || |||| ||| ||||| ||||| | || || ||||| Sbjct: 1037 tttgtccgcgtttacacctcggcgagtgcaatgaagaacactccattgaagctctcttac 1096 Query: 1144 gtatatcaatgtgtcggctgtgattctttccatcttca 1181 ||||||||||| | ||||||||||| || |||||||| Sbjct: 1097 gtatatcaatgcattggctgtgattcatttcatcttca 1134 Score = 50.1 bits (25), Expect = 0.034 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1588 gttatttgggacatcatgcgctgctgggtgaaaaaccatcc 1628 ||||| |||||||| ||||||||||||||||| || ||||| Sbjct: 1541 gttatctgggacattatgcgctgctgggtgaagaatcatcc 1581 Score = 48.1 bits (24), Expect = 0.13 Identities = 30/32 (93%) Strand = Plus / Plus Query: 292 caggtgcacaacagagacatgtccattgctgt 323 |||||| |||| |||||||||||||||||||| Sbjct: 257 caggtgaacaatagagacatgtccattgctgt 288
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 141 bits (71), Expect = 1e-29 Identities = 176/211 (83%) Strand = Plus / Plus Query: 1216 gtgaagtatgcgcctggtattggacctgttgttcctcaagaatgtagcgactgtggaaag 1275 |||||| ||||||||| ||||| ||||||||||||||||| || || | |||||| ||| Sbjct: 17594 gtgaagaatgcgcctgccattgggcctgttgttcctcaagagtgcagtgcctgtgggaag 17653 Query: 1276 aaatttaatgtgggcgggccaatatattccgctcctattcatgatcaagattgggtactt 1335 ||||||| | | || |||||||||| || |||||||| ||||| ||||| |||||| | Sbjct: 17654 aaatttactataggagggccaatatggtctgctcctatacatgaccaagagtgggtagtg 17713 Query: 1336 tctacgctgacagatgttaggccaatgaaggatagatatcctgcatacaacaaaattact 1395 ||||| ||||||| |||| | ||||||||||||||||||||||||| | || || ||| Sbjct: 17714 tctactttgacagaagttaagtcaatgaaggatagatatcctgcatatgataagataact 17773 Query: 1396 tcagttctaactactgtatcagaggaattgc 1426 |||||||| ||||| ||||||||| ||||| Sbjct: 17774 tcagttctgactaccatatcagaggtattgc 17804 Score = 125 bits (63), Expect = 7e-25 Identities = 126/147 (85%) Strand = Plus / Plus Query: 798 ggttgatcttgacccctatgggtcaccatctgtattcctcgactcagctgtacaggctgt 857 ||||||| ||||||||||||| |||| ||| | ||||| || || |||||||||||||| Sbjct: 16602 ggttgatattgacccctatggagcaccttctattttccttgattcggctgtacaggctgt 16661 Query: 858 tgctgatggtggactattaatgtgtacagccactgatctggcagtactttgtggaaccaa 917 |||||||||||| ||||||||||| || ||||||||| |||| || || ||||| | || Sbjct: 16662 tgctgatggtgggctattaatgtgcactgccactgatatggcggttctatgtgggccaaa 16721 Query: 918 tggagaagtttgctactccaagtatgg 944 ||| ||||||||| ||||||||||||| Sbjct: 16722 tggtgaagtttgccactccaagtatgg 16748 Score = 99.6 bits (50), Expect = 4e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 683 ttgaagcttgcaagaggaacatcaagttcaatggggcttctgttattagcaaggtggaag 742 |||||||||||||| |||| || ||||| ||||| ||||||| ||| || ||| | || Sbjct: 16220 ttgaagcttgcaagcggaatataaagtttaatggtgcttctgctatgagtaagatcgagc 16279 Query: 743 ctcacttggctgatgctcgagtttacatgctcactcatccaaaagaatttgatgtggt 800 |||| ||| |||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 16280 ctcatttgactgatgctcgagtttatatgctcacacatccaaaagagtttgatgtggt 16337 Score = 95.6 bits (48), Expect = 6e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 1010 agagccatgcaaatcggtataagagatatattgtgcctgttctctctgtgtttatggatt 1069 |||| ||||||||||| || || ||||||||||||||||||||||||||| |||||||| Sbjct: 17168 agagtcatgcaaatcgatacaaacgatatattgtgcctgttctctctgtgtctatggatt 17227 Query: 1070 tctatgtccgtgtgtttgttcgagtatt 1097 |||| ||||||| ||||| |||||||| Sbjct: 17228 tctacatccgtgtttttgtccgagtatt 17255 Score = 93.7 bits (47), Expect = 3e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 503 atgaaatagaagatccgtcaaaagaagaaacgaagacaccttccgggaaagtaaccagag 562 |||||| |||||||| ||||| ||||| ||| ||||||||||| |||||||| |||||| Sbjct: 15444 atgaaacagaagatctgtcaacagaagcaacaaagacaccttcgcggaaagtagccagag 15503 Query: 563 agcttaagccaccaattgttcttgagg 589 |||||||| ||||| |||||||||||| Sbjct: 15504 agcttaaggcaccagttgttcttgagg 15530 Score = 89.7 bits (45), Expect = 4e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 1693 gcaaatttctctagagcagttgctgccctcagcaaggctcagatgaagaaggtgaatcgg 1752 ||||||||||||||||| | |||||||||||||| |||||| |||||||| || ||| Sbjct: 18827 gcaaatttctctagagcggctgctgccctcagcagggctcaagcaaagaaggtcaagcgg 18886 Query: 1753 ttccttccaaacccagaaagtcactggggtccaaaggtcagggcaggtcggagaattaca 1812 |||||||| ||||||||| |||| |||||||| || |||| || ||||||| |||||| Sbjct: 18887 ttccttccgaacccagaacgtcattggggtcccaaaatcagagctggtcggaagattaca 18946 Query: 1813 a 1813 | Sbjct: 18947 a 18947 Score = 87.7 bits (44), Expect = 2e-13 Identities = 157/192 (81%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 1426 catgacattccattattttttagtctccataacatatctgggactgtgaagtgcacatca 1485 |||||||| ||||| || || |||||||| ||||||| || | ||| || |||||||| Sbjct: 18350 catgacatcccattgttcttcagtctccacaacatatgtgctaatgttaaatgcacatct 18409 Query: 1486 ccatctgcagttatgttccggtcagcagttataaatgcaggatatcagatatcaagcagt 1545 ||||||||||| ||||||| || ||||| ||||||| || |||| ||| || |||| Sbjct: 18410 ccatctgcagtattgttccgatctgcagtcctaaatgcgggttatcggatttctagcaca 18469 Query: 1546 cactgt-aacccgctcgggctgaagtctgatgccccgtgggatgttatttgggacatcat 1604 || ||| || || || || || || |||||||||| ||||||||||||||||||||||| Sbjct: 18470 ca-tgtgaatccacttggactaaaaactgatgccccttgggatgttatttgggacatcat 18528 Query: 1605 gcgctgctgggt 1616 |||||||||||| Sbjct: 18529 gcgctgctgggt 18540 Score = 75.8 bits (38), Expect = 6e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 595 gctgcttctgggttgaggtctctccgttatgctcgtgaagttgatggattaggaaaggta 654 ||||||||||||||||| ||| ||||||||||||||||| | || | |||| |||||| Sbjct: 16040 gctgcttctgggttgagatctatccgttatgctcgtgaaatagacgtgttagaaaaggtg 16099 Query: 655 gttgctctggacaatgataaag 676 || |||||||||| |||||||| Sbjct: 16100 gtcgctctggacattgataaag 16121 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 939 gtatggttcctacccagtcagaggcaagtattgccatgaaatggctttgagaatcctcct 998 |||||||||||| ||| || ||| |||||| |||||||||||||||| |||||||||| Sbjct: 16819 gtatggttcctatccaaccaaagggaagtataaccatgaaatggctttgcgaatcctcct 16878 Query: 999 tgccagtat 1007 ||||||||| Sbjct: 16879 tgccagtat 16887 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 1135 ctttcttatgtatatcaatgtgtcggctgtgattctttccatcttcagtcccttgggagg 1194 ||||||||||||||||||||||| || || ||||| || |||||||||| ||||| ||| Sbjct: 17405 ctttcttatgtatatcaatgtgttggttgcgattcatttcatcttcagtgtcttggtagg 17464 Query: 1195 ac 1196 || Sbjct: 17465 ac 17466 Score = 42.1 bits (21), Expect = 8.2 Identities = 69/85 (81%) Strand = Plus / Plus Query: 293 aggtgcacaacagagacatgtccattgctgtgttaaggacatttgttgccaagcgcaagg 352 |||| ||||| ||||| ||||| ||||| | |||||||| || |||||||||| ||| Sbjct: 15234 aggtccacaatagagatatgtcagttgctcttttaaggactttcattgccaagcgtgagg 15293 Query: 353 aagaacatgaggaactgatgaataa 377 |||||||| ||| | ||||| |||| Sbjct: 15294 aagaacataaggcaatgatggataa 15318
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 141 bits (71), Expect = 1e-29 Identities = 176/211 (83%) Strand = Plus / Plus Query: 1216 gtgaagtatgcgcctggtattggacctgttgttcctcaagaatgtagcgactgtggaaag 1275 |||||| ||||||||| ||||| ||||||||||||||||| || || | |||||| ||| Sbjct: 99233 gtgaagaatgcgcctgccattgggcctgttgttcctcaagagtgcagtgcctgtgggaag 99292 Query: 1276 aaatttaatgtgggcgggccaatatattccgctcctattcatgatcaagattgggtactt 1335 ||||||| | | || |||||||||| || |||||||| ||||| ||||| |||||| | Sbjct: 99293 aaatttactataggagggccaatatggtctgctcctatacatgaccaagagtgggtagtg 99352 Query: 1336 tctacgctgacagatgttaggccaatgaaggatagatatcctgcatacaacaaaattact 1395 ||||| ||||||| |||| | ||||||||||||||||||||||||| | || || ||| Sbjct: 99353 tctactttgacagaagttaagtcaatgaaggatagatatcctgcatatgataagataact 99412 Query: 1396 tcagttctaactactgtatcagaggaattgc 1426 |||||||| ||||| ||||||||| ||||| Sbjct: 99413 tcagttctgactaccatatcagaggtattgc 99443 Score = 125 bits (63), Expect = 7e-25 Identities = 126/147 (85%) Strand = Plus / Plus Query: 798 ggttgatcttgacccctatgggtcaccatctgtattcctcgactcagctgtacaggctgt 857 ||||||| ||||||||||||| |||| ||| | ||||| || || |||||||||||||| Sbjct: 98241 ggttgatattgacccctatggagcaccttctattttccttgattcggctgtacaggctgt 98300 Query: 858 tgctgatggtggactattaatgtgtacagccactgatctggcagtactttgtggaaccaa 917 |||||||||||| ||||||||||| || ||||||||| |||| || || ||||| | || Sbjct: 98301 tgctgatggtgggctattaatgtgcactgccactgatatggcggttctatgtgggccaaa 98360 Query: 918 tggagaagtttgctactccaagtatgg 944 ||| ||||||||| ||||||||||||| Sbjct: 98361 tggtgaagtttgccactccaagtatgg 98387 Score = 99.6 bits (50), Expect = 4e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 683 ttgaagcttgcaagaggaacatcaagttcaatggggcttctgttattagcaaggtggaag 742 |||||||||||||| |||| || ||||| ||||| ||||||| ||| || ||| | || Sbjct: 97859 ttgaagcttgcaagcggaatataaagtttaatggtgcttctgctatgagtaagatcgagc 97918 Query: 743 ctcacttggctgatgctcgagtttacatgctcactcatccaaaagaatttgatgtggt 800 |||| ||| |||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 97919 ctcatttgactgatgctcgagtttatatgctcacacatccaaaagagtttgatgtggt 97976 Score = 95.6 bits (48), Expect = 6e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 1010 agagccatgcaaatcggtataagagatatattgtgcctgttctctctgtgtttatggatt 1069 |||| ||||||||||| || || ||||||||||||||||||||||||||| |||||||| Sbjct: 98807 agagtcatgcaaatcgatacaaacgatatattgtgcctgttctctctgtgtctatggatt 98866 Query: 1070 tctatgtccgtgtgtttgttcgagtatt 1097 |||| ||||||| ||||| |||||||| Sbjct: 98867 tctacatccgtgtttttgtccgagtatt 98894 Score = 93.7 bits (47), Expect = 3e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 503 atgaaatagaagatccgtcaaaagaagaaacgaagacaccttccgggaaagtaaccagag 562 |||||| |||||||| ||||| ||||| ||| ||||||||||| |||||||| |||||| Sbjct: 97083 atgaaacagaagatctgtcaacagaagcaacaaagacaccttcgcggaaagtagccagag 97142 Query: 563 agcttaagccaccaattgttcttgagg 589 |||||||| ||||| |||||||||||| Sbjct: 97143 agcttaaggcaccagttgttcttgagg 97169 Score = 89.7 bits (45), Expect = 4e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 1693 gcaaatttctctagagcagttgctgccctcagcaaggctcagatgaagaaggtgaatcgg 1752 ||||||||||||||||| | |||||||||||||| |||||| |||||||| || ||| Sbjct: 100466 gcaaatttctctagagcggctgctgccctcagcagggctcaagcaaagaaggtcaagcgg 100525 Query: 1753 ttccttccaaacccagaaagtcactggggtccaaaggtcagggcaggtcggagaattaca 1812 |||||||| ||||||||| |||| |||||||| || |||| || ||||||| |||||| Sbjct: 100526 ttccttccgaacccagaacgtcattggggtcccaaaatcagagctggtcggaagattaca 100585 Query: 1813 a 1813 | Sbjct: 100586 a 100586 Score = 87.7 bits (44), Expect = 2e-13 Identities = 157/192 (81%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 1426 catgacattccattattttttagtctccataacatatctgggactgtgaagtgcacatca 1485 |||||||| ||||| || || |||||||| ||||||| || | ||| || |||||||| Sbjct: 99989 catgacatcccattgttcttcagtctccacaacatatgtgctaatgttaaatgcacatct 100048 Query: 1486 ccatctgcagttatgttccggtcagcagttataaatgcaggatatcagatatcaagcagt 1545 ||||||||||| ||||||| || ||||| ||||||| || |||| ||| || |||| Sbjct: 100049 ccatctgcagtattgttccgatctgcagtcctaaatgcgggttatcggatttctagcaca 100108 Query: 1546 cactgt-aacccgctcgggctgaagtctgatgccccgtgggatgttatttgggacatcat 1604 || ||| || || || || || || |||||||||| ||||||||||||||||||||||| Sbjct: 100109 ca-tgtgaatccacttggactaaaaactgatgccccttgggatgttatttgggacatcat 100167 Query: 1605 gcgctgctgggt 1616 |||||||||||| Sbjct: 100168 gcgctgctgggt 100179 Score = 75.8 bits (38), Expect = 6e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 595 gctgcttctgggttgaggtctctccgttatgctcgtgaagttgatggattaggaaaggta 654 ||||||||||||||||| ||| ||||||||||||||||| | || | |||| |||||| Sbjct: 97679 gctgcttctgggttgagatctatccgttatgctcgtgaaatagacgtgttagaaaaggtg 97738 Query: 655 gttgctctggacaatgataaag 676 || |||||||||| |||||||| Sbjct: 97739 gtcgctctggacattgataaag 97760 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 939 gtatggttcctacccagtcagaggcaagtattgccatgaaatggctttgagaatcctcct 998 |||||||||||| ||| || ||| |||||| |||||||||||||||| |||||||||| Sbjct: 98458 gtatggttcctatccaaccaaagggaagtataaccatgaaatggctttgcgaatcctcct 98517 Query: 999 tgccagtat 1007 ||||||||| Sbjct: 98518 tgccagtat 98526 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 1135 ctttcttatgtatatcaatgtgtcggctgtgattctttccatcttcagtcccttgggagg 1194 ||||||||||||||||||||||| || || ||||| || |||||||||| ||||| ||| Sbjct: 99044 ctttcttatgtatatcaatgtgttggttgcgattcatttcatcttcagtgtcttggtagg 99103 Query: 1195 ac 1196 || Sbjct: 99104 ac 99105 Score = 42.1 bits (21), Expect = 8.2 Identities = 69/85 (81%) Strand = Plus / Plus Query: 293 aggtgcacaacagagacatgtccattgctgtgttaaggacatttgttgccaagcgcaagg 352 |||| ||||| ||||| ||||| ||||| | |||||||| || |||||||||| ||| Sbjct: 96873 aggtccacaatagagatatgtcagttgctcttttaaggactttcattgccaagcgtgagg 96932 Query: 353 aagaacatgaggaactgatgaataa 377 |||||||| ||| | ||||| |||| Sbjct: 96933 aagaacataaggcaatgatggataa 96957
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 141 bits (71), Expect = 1e-29 Identities = 176/211 (83%) Strand = Plus / Plus Query: 1216 gtgaagtatgcgcctggtattggacctgttgttcctcaagaatgtagcgactgtggaaag 1275 |||||| ||||||||| ||||| ||||||||||||||||| || || | |||||| ||| Sbjct: 32455976 gtgaagaatgcgcctgccattgggcctgttgttcctcaagagtgcagtgcctgtgggaag 32456035 Query: 1276 aaatttaatgtgggcgggccaatatattccgctcctattcatgatcaagattgggtactt 1335 ||||||| | | || |||||||||| || |||||||| ||||| ||||| |||||| | Sbjct: 32456036 aaatttactataggagggccaatatggtctgctcctatacatgaccaagagtgggtagtg 32456095 Query: 1336 tctacgctgacagatgttaggccaatgaaggatagatatcctgcatacaacaaaattact 1395 ||||| ||||||| |||| | ||||||||||||||||||||||||| | || || ||| Sbjct: 32456096 tctactttgacagaagttaagtcaatgaaggatagatatcctgcatatgataagataact 32456155 Query: 1396 tcagttctaactactgtatcagaggaattgc 1426 |||||||| ||||| ||||||||| ||||| Sbjct: 32456156 tcagttctgactaccatatcagaggtattgc 32456186 Score = 125 bits (63), Expect = 7e-25 Identities = 126/147 (85%) Strand = Plus / Plus Query: 798 ggttgatcttgacccctatgggtcaccatctgtattcctcgactcagctgtacaggctgt 857 ||||||| ||||||||||||| |||| ||| | ||||| || || |||||||||||||| Sbjct: 32454984 ggttgatattgacccctatggagcaccttctattttccttgattcggctgtacaggctgt 32455043 Query: 858 tgctgatggtggactattaatgtgtacagccactgatctggcagtactttgtggaaccaa 917 |||||||||||| ||||||||||| || ||||||||| |||| || || ||||| | || Sbjct: 32455044 tgctgatggtgggctattaatgtgcactgccactgatatggcggttctatgtgggccaaa 32455103 Query: 918 tggagaagtttgctactccaagtatgg 944 ||| ||||||||| ||||||||||||| Sbjct: 32455104 tggtgaagtttgccactccaagtatgg 32455130 Score = 99.6 bits (50), Expect = 4e-17 Identities = 101/118 (85%) Strand = Plus / Plus Query: 683 ttgaagcttgcaagaggaacatcaagttcaatggggcttctgttattagcaaggtggaag 742 |||||||||||||| |||| || ||||| ||||| ||||||| ||| || ||| | || Sbjct: 32454602 ttgaagcttgcaagcggaatataaagtttaatggtgcttctgctatgagtaagatcgagc 32454661 Query: 743 ctcacttggctgatgctcgagtttacatgctcactcatccaaaagaatttgatgtggt 800 |||| ||| |||||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 32454662 ctcatttgactgatgctcgagtttatatgctcacacatccaaaagagtttgatgtggt 32454719 Score = 95.6 bits (48), Expect = 6e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 1010 agagccatgcaaatcggtataagagatatattgtgcctgttctctctgtgtttatggatt 1069 |||| ||||||||||| || || ||||||||||||||||||||||||||| |||||||| Sbjct: 32455550 agagtcatgcaaatcgatacaaacgatatattgtgcctgttctctctgtgtctatggatt 32455609 Query: 1070 tctatgtccgtgtgtttgttcgagtatt 1097 |||| ||||||| ||||| |||||||| Sbjct: 32455610 tctacatccgtgtttttgtccgagtatt 32455637 Score = 93.7 bits (47), Expect = 3e-15 Identities = 77/87 (88%) Strand = Plus / Plus Query: 503 atgaaatagaagatccgtcaaaagaagaaacgaagacaccttccgggaaagtaaccagag 562 |||||| |||||||| ||||| ||||| ||| ||||||||||| |||||||| |||||| Sbjct: 32453826 atgaaacagaagatctgtcaacagaagcaacaaagacaccttcgcggaaagtagccagag 32453885 Query: 563 agcttaagccaccaattgttcttgagg 589 |||||||| ||||| |||||||||||| Sbjct: 32453886 agcttaaggcaccagttgttcttgagg 32453912 Score = 89.7 bits (45), Expect = 4e-14 Identities = 102/121 (84%) Strand = Plus / Plus Query: 1693 gcaaatttctctagagcagttgctgccctcagcaaggctcagatgaagaaggtgaatcgg 1752 ||||||||||||||||| | |||||||||||||| |||||| |||||||| || ||| Sbjct: 32457209 gcaaatttctctagagcggctgctgccctcagcagggctcaagcaaagaaggtcaagcgg 32457268 Query: 1753 ttccttccaaacccagaaagtcactggggtccaaaggtcagggcaggtcggagaattaca 1812 |||||||| ||||||||| |||| |||||||| || |||| || ||||||| |||||| Sbjct: 32457269 ttccttccgaacccagaacgtcattggggtcccaaaatcagagctggtcggaagattaca 32457328 Query: 1813 a 1813 | Sbjct: 32457329 a 32457329 Score = 87.7 bits (44), Expect = 2e-13 Identities = 157/192 (81%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 1426 catgacattccattattttttagtctccataacatatctgggactgtgaagtgcacatca 1485 |||||||| ||||| || || |||||||| ||||||| || | ||| || |||||||| Sbjct: 32456732 catgacatcccattgttcttcagtctccacaacatatgtgctaatgttaaatgcacatct 32456791 Query: 1486 ccatctgcagttatgttccggtcagcagttataaatgcaggatatcagatatcaagcagt 1545 ||||||||||| ||||||| || ||||| ||||||| || |||| ||| || |||| Sbjct: 32456792 ccatctgcagtattgttccgatctgcagtcctaaatgcgggttatcggatttctagcaca 32456851 Query: 1546 cactgt-aacccgctcgggctgaagtctgatgccccgtgggatgttatttgggacatcat 1604 || ||| || || || || || || |||||||||| ||||||||||||||||||||||| Sbjct: 32456852 ca-tgtgaatccacttggactaaaaactgatgccccttgggatgttatttgggacatcat 32456910 Query: 1605 gcgctgctgggt 1616 |||||||||||| Sbjct: 32456911 gcgctgctgggt 32456922 Score = 75.8 bits (38), Expect = 6e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 595 gctgcttctgggttgaggtctctccgttatgctcgtgaagttgatggattaggaaaggta 654 ||||||||||||||||| ||| ||||||||||||||||| | || | |||| |||||| Sbjct: 32454422 gctgcttctgggttgagatctatccgttatgctcgtgaaatagacgtgttagaaaaggtg 32454481 Query: 655 gttgctctggacaatgataaag 676 || |||||||||| |||||||| Sbjct: 32454482 gtcgctctggacattgataaag 32454503 Score = 73.8 bits (37), Expect = 2e-09 Identities = 61/69 (88%) Strand = Plus / Plus Query: 939 gtatggttcctacccagtcagaggcaagtattgccatgaaatggctttgagaatcctcct 998 |||||||||||| ||| || ||| |||||| |||||||||||||||| |||||||||| Sbjct: 32455201 gtatggttcctatccaaccaaagggaagtataaccatgaaatggctttgcgaatcctcct 32455260 Query: 999 tgccagtat 1007 ||||||||| Sbjct: 32455261 tgccagtat 32455269 Score = 60.0 bits (30), Expect = 3e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 1135 ctttcttatgtatatcaatgtgtcggctgtgattctttccatcttcagtcccttgggagg 1194 ||||||||||||||||||||||| || || ||||| || |||||||||| ||||| ||| Sbjct: 32455787 ctttcttatgtatatcaatgtgttggttgcgattcatttcatcttcagtgtcttggtagg 32455846 Query: 1195 ac 1196 || Sbjct: 32455847 ac 32455848 Score = 42.1 bits (21), Expect = 8.2 Identities = 69/85 (81%) Strand = Plus / Plus Query: 293 aggtgcacaacagagacatgtccattgctgtgttaaggacatttgttgccaagcgcaagg 352 |||| ||||| ||||| ||||| ||||| | |||||||| || |||||||||| ||| Sbjct: 32453616 aggtccacaatagagatatgtcagttgctcttttaaggactttcattgccaagcgtgagg 32453675 Query: 353 aagaacatgaggaactgatgaataa 377 |||||||| ||| | ||||| |||| Sbjct: 32453676 aagaacataaggcaatgatggataa 32453700
>ref|NM_001070959.1| Oryza sativa (japonica cultivar-group) Os10g0357800 (Os10g0357800) mRNA, complete cds Length = 1837 Score = 81.8 bits (41), Expect = 1e-11 Identities = 59/65 (90%) Strand = Plus / Plus Query: 754 gatgctcgagtttacatgctcactcatccaaaagaatttgatgtggttgatcttgacccc 813 ||||| || |||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 656 gatgcacgtgtttacatgctcacccacccaaaagaatttgatgtggttgaccttgaccct 715 Query: 814 tatgg 818 ||||| Sbjct: 716 tatgg 720
>dbj|AK064907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L24, full insert sequence Length = 1839 Score = 81.8 bits (41), Expect = 1e-11 Identities = 59/65 (90%) Strand = Plus / Plus Query: 754 gatgctcgagtttacatgctcactcatccaaaagaatttgatgtggttgatcttgacccc 813 ||||| || |||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 657 gatgcacgtgtttacatgctcacccacccaaaagaatttgatgtggttgaccttgaccct 716 Query: 814 tatgg 818 ||||| Sbjct: 717 tatgg 721
>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence, complete sequence Length = 94369 Score = 63.9 bits (32), Expect = 2e-06 Identities = 62/72 (86%) Strand = Plus / Minus Query: 940 tatggttcctacccagtcagaggcaagtattgccatgaaatggctttgagaatcctcctt 999 |||||||| |||||| | |||| |||||||| ||||| ||||||||| | ||||||||| Sbjct: 3156 tatggttcttacccattgagagcgaagtattgtcatgagatggctttgcggatcctcctt 3097 Query: 1000 gccagtatcgag 1011 ||||| |||||| Sbjct: 3096 gccagcatcgag 3085 Score = 46.1 bits (23), Expect = 0.53 Identities = 65/79 (82%) Strand = Plus / Minus Query: 1010 agagccatgcaaatcggtataagagatatattgtgcctgttctctctgtgtttatggatt 1069 ||||||||||||| || || ||| | |||||||| || || || |||||| ||||||| Sbjct: 2993 agagccatgcaaaccgctacaagcggtatattgttccggtgctatctgtgcaaatggatt 2934 Query: 1070 tctatgtccgtgtgtttgt 1088 ||||||| ||||| ||||| Sbjct: 2933 tctatgttcgtgtttttgt 2915 Score = 46.1 bits (23), Expect = 0.53 Identities = 29/31 (93%) Strand = Plus / Minus Query: 293 aggtgcacaacagagacatgtccattgctgt 323 ||||| |||| |||||||||||||||||||| Sbjct: 4186 aggtgaacaatagagacatgtccattgctgt 4156 Score = 42.1 bits (21), Expect = 8.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1588 gttatttgggacatcatgcgctgctgggt 1616 ||||| |||||||| |||||||||||||| Sbjct: 1964 gttatctgggacattatgcgctgctgggt 1936 Score = 42.1 bits (21), Expect = 8.2 Identities = 39/45 (86%) Strand = Plus / Minus Query: 798 ggttgatcttgacccctatgggtcaccatctgtattcctcgactc 842 |||||||||||| || ||||| ||||||||| | ||||| ||||| Sbjct: 3383 ggttgatcttgatccatatggatcaccatctattttccttgactc 3339
>gb|AC068900.3|AC068900 Arabidopsis thaliana chromosome 3 BAC F11A12 genomic sequence, complete sequence Length = 22087 Score = 63.9 bits (32), Expect = 2e-06 Identities = 62/72 (86%) Strand = Plus / Plus Query: 940 tatggttcctacccagtcagaggcaagtattgccatgaaatggctttgagaatcctcctt 999 |||||||| |||||| | |||| |||||||| ||||| ||||||||| | ||||||||| Sbjct: 2256 tatggttcttacccattgagagcgaagtattgtcatgagatggctttgcggatcctcctt 2315 Query: 1000 gccagtatcgag 1011 ||||| |||||| Sbjct: 2316 gccagcatcgag 2327 Score = 46.1 bits (23), Expect = 0.53 Identities = 29/31 (93%) Strand = Plus / Plus Query: 293 aggtgcacaacagagacatgtccattgctgt 323 ||||| |||| |||||||||||||||||||| Sbjct: 1226 aggtgaacaatagagacatgtccattgctgt 1256 Score = 46.1 bits (23), Expect = 0.53 Identities = 65/79 (82%) Strand = Plus / Plus Query: 1010 agagccatgcaaatcggtataagagatatattgtgcctgttctctctgtgtttatggatt 1069 ||||||||||||| || || ||| | |||||||| || || || |||||| ||||||| Sbjct: 2419 agagccatgcaaaccgctacaagcggtatattgttccggtgctatctgtgcaaatggatt 2478 Query: 1070 tctatgtccgtgtgtttgt 1088 ||||||| ||||| ||||| Sbjct: 2479 tctatgttcgtgtttttgt 2497 Score = 42.1 bits (21), Expect = 8.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 798 ggttgatcttgacccctatgggtcaccatctgtattcctcgactc 842 |||||||||||| || ||||| ||||||||| | ||||| ||||| Sbjct: 2029 ggttgatcttgatccatatggatcaccatctattttccttgactc 2073 Score = 42.1 bits (21), Expect = 8.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1588 gttatttgggacatcatgcgctgctgggt 1616 ||||| |||||||| |||||||||||||| Sbjct: 3448 gttatctgggacattatgcgctgctgggt 3476
>gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 genomic sequence, complete sequence Length = 141050 Score = 61.9 bits (31), Expect = 9e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 754 gatgctcgagtttacatgctcactcatccaaaagaatttgatgtggt 800 ||||| || |||||||||||||| || |||||||||||||||||||| Sbjct: 140457 gatgcacgtgtttacatgctcacccacccaaaagaatttgatgtggt 140411
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 61.9 bits (31), Expect = 9e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 754 gatgctcgagtttacatgctcactcatccaaaagaatttgatgtggt 800 ||||| || |||||||||||||| || |||||||||||||||||||| Sbjct: 124896 gatgcacgtgtttacatgctcacccacccaaaagaatttgatgtggt 124942
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 61.9 bits (31), Expect = 9e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 754 gatgctcgagtttacatgctcactcatccaaaagaatttgatgtggt 800 ||||| || |||||||||||||| || |||||||||||||||||||| Sbjct: 10418504 gatgcacgtgtttacatgctcacccacccaaaagaatttgatgtggt 10418550
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 61.9 bits (31), Expect = 9e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 754 gatgctcgagtttacatgctcactcatccaaaagaatttgatgtggt 800 ||||| || |||||||||||||| || |||||||||||||||||||| Sbjct: 58960 gatgcacgtgtttacatgctcacccacccaaaagaatttgatgtggt 59006
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 752 ctgatgctcgagtttacatgctcactcatccaaaagaatttgatgtggt 800 |||||||||| || ||||||||||| || ||||||||||||||| |||| Sbjct: 59887 ctgatgctcgtgtatacatgctcacccacccaaaagaatttgatatggt 59935 Score = 46.1 bits (23), Expect = 0.53 Identities = 65/79 (82%) Strand = Plus / Plus Query: 1010 agagccatgcaaatcggtataagagatatattgtgcctgttctctctgtgtttatggatt 1069 ||||||||||||| || || | | | |||||||| ||||| || |||||| ||||||| Sbjct: 60649 agagccatgcaaaccgctacaggcggtatattgttcctgtcctatctgtgcaaatggatt 60708 Query: 1070 tctatgtccgtgtgtttgt 1088 ||||||| ||||| ||||| Sbjct: 60709 tctatgttcgtgtttttgt 60727 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 622 tatgctcgtgaagttgatgga 642 ||||||||||||||||||||| Sbjct: 59660 tatgctcgtgaagttgatgga 59680 Score = 42.1 bits (21), Expect = 8.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 672 taaagcttctgttgaagcttgcaagaggaacatcaagttcaatgg 716 |||||| || ||||||||||| ||||||||| ||||||||||| Sbjct: 59807 taaagcatccgttgaagcttgtcggaggaacataaagttcaatgg 59851 Score = 42.1 bits (21), Expect = 8.2 Identities = 84/105 (80%) Strand = Plus / Plus Query: 798 ggttgatcttgacccctatgggtcaccatctgtattcctcgactcagctgtacaggctgt 857 ||||||||| || || ||||| || |||||| | ||||| || |||||||| ||| | || Sbjct: 60094 ggttgatctcgatccatatggttcgccatctatcttccttgattcagctgtccagtcagt 60153 Query: 858 tgctgatggtggactattaatgtgtacagccactgatctggcagt 902 || |||||| || | | ||||||||||| |||||| ||||||| Sbjct: 60154 tgttgatggagggttgctgatgtgtacagcaactgatatggcagt 60198 Score = 42.1 bits (21), Expect = 8.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 1584 ggatgttatttgggacatcatgcgctgctgggt 1616 |||||| || ||||| ||||||||||||||||| Sbjct: 61596 ggatgtcatctgggatatcatgcgctgctgggt 61628
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence Length = 146078 Score = 52.0 bits (26), Expect = 0.009 Identities = 47/54 (87%) Strand = Plus / Plus Query: 958 agaggcaagtattgccatgaaatggctttgagaatcctccttgccagtatcgag 1011 ||||| || ||||| ||||| |||||| |||| |||||||||||||| |||||| Sbjct: 69335 agagggaaatattgtcatgagatggctctgaggatcctccttgccagcatcgag 69388 Score = 50.1 bits (25), Expect = 0.034 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1762 aacccagaaagtcactggggtccaaaggtcagggcaggtcg 1802 |||||||||| || |||||||||||||| ||||||||||| Sbjct: 70928 aacccagaaaagcattggggtccaaaggtgagggcaggtcg 70968 Score = 46.1 bits (23), Expect = 0.53 Identities = 65/79 (82%) Strand = Plus / Plus Query: 1010 agagccatgcaaatcggtataagagatatattgtgcctgttctctctgtgtttatggatt 1069 |||| ||||||||||| || ||| | || ||||| ||||| || |||||| ||||||| Sbjct: 69560 agagtcatgcaaatcgctacaagcggtacattgtacctgtcctgtctgtgcaaatggatt 69619 Query: 1070 tctatgtccgtgtgtttgt 1088 ||||||| ||||| ||||| Sbjct: 69620 tctatgttcgtgtttttgt 69638 Score = 44.1 bits (22), Expect = 2.1 Identities = 55/66 (83%) Strand = Plus / Plus Query: 299 acaacagagacatgtccattgctgtgttaaggacatttgttgccaagcgcaaggaagaac 358 ||||||| |||||||| |||||||| ||||| ||||| | | |||||||| |||||| Sbjct: 68258 acaacagggacatgtctattgctgtcctaagggcatttatatcgaagcgcaaacaagaac 68317 Query: 359 atgagg 364 |||||| Sbjct: 68318 atgagg 68323 Score = 42.1 bits (21), Expect = 8.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 752 ctgatgctcgagtttacatgctcactcatccaaaagaatttgatgtggt 800 |||||||||| || || |||||||| || ||||||||||| ||| |||| Sbjct: 68936 ctgatgctcgtgtatatatgctcacccacccaaaagaattcgatatggt 68984
>emb|AL391144.1|ATF14F8 Arabidopsis thaliana DNA chromosome 5, BAC clone F14F8 (ESSA project) Length = 96892 Score = 50.1 bits (25), Expect = 0.034 Identities = 43/49 (87%) Strand = Plus / Plus Query: 752 ctgatgctcgagtttacatgctcactcatccaaaagaatttgatgtggt 800 |||||||||| ||| ||||||||| || |||||||| ||||||||||| Sbjct: 74748 ctgatgctcgtgttcacatgctcagccacccaaaagattttgatgtggt 74796 Score = 50.1 bits (25), Expect = 0.034 Identities = 40/45 (88%) Strand = Plus / Plus Query: 967 tattgccatgaaatggctttgagaatcctccttgccagtatcgag 1011 ||||| ||||| ||||||||||| |||||||| ||||| |||||| Sbjct: 75120 tattgtcatgagatggctttgaggatcctcctcgccagcatcgag 75164 Score = 46.1 bits (23), Expect = 0.53 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1010 agagccatgcaaatcggtataagagatatattgtgcctgttct 1052 |||||||||||||||| || ||| | |||||||| |||||||| Sbjct: 75305 agagccatgcaaatcgctacaagcggtatattgttcctgttct 75347 Score = 42.1 bits (21), Expect = 8.2 Identities = 39/45 (86%) Strand = Plus / Plus Query: 672 taaagcttctgttgaagcttgcaagaggaacatcaagttcaatgg 716 |||||| || |||||||| ||| |||| ||||| ||||||||||| Sbjct: 74668 taaagcatcggttgaagcctgccagagaaacattaagttcaatgg 74712 Score = 42.1 bits (21), Expect = 8.2 Identities = 84/105 (80%) Strand = Plus / Plus Query: 798 ggttgatcttgacccctatgggtcaccatctgtattcctcgactcagctgtacaggctgt 857 ||||||||||||||| ||||| | || ||| | ||||| ||||||||||| || | || Sbjct: 74867 ggttgatcttgacccatatggtgcgccgtctattttccttgactcagctgttcaatcagt 74926 Query: 858 tgctgatggtggactattaatgtgtacagccactgatctggcagt 902 ||| |||||||| | | ||||||||||| ||||| ||||||| Sbjct: 74927 tgccgatggtggtttgctgatgtgtacagcaactgacatggcagt 74971 Score = 42.1 bits (21), Expect = 8.2 Identities = 54/65 (83%) Strand = Plus / Plus Query: 1267 tgtggaaagaaatttaatgtgggcgggccaatatattccgctcctattcatgatcaagat 1326 ||||||||||||| |||| |||| || ||||||| || ||||| || || |||||||| Sbjct: 75722 tgtggaaagaaatataatatgggtggaccaatatggtctgctccaatccacgatcaagaa 75781 Query: 1327 tgggt 1331 ||||| Sbjct: 75782 tgggt 75786
>emb|AL731834.2| Sminthopsis DNA sequence from clone XX-202F9, complete sequence Length = 60585 Score = 50.1 bits (25), Expect = 0.034 Identities = 25/25 (100%) Strand = Plus / Minus Query: 1594 tgggacatcatgcgctgctgggtga 1618 ||||||||||||||||||||||||| Sbjct: 19145 tgggacatcatgcgctgctgggtga 19121
>dbj|AK239627.1| Sus scrofa mRNA, clone:THY010117D10, expressed in thymus Length = 2053 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1594 tgggacatcatgcgctgctggg 1615 |||||||||||||||||||||| Sbjct: 1509 tgggacatcatgcgctgctggg 1530
>ref|XM_633419.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0186078) mRNA, complete cds Length = 1815 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1066 gatttctatgtccgtgtgtttgttcg 1091 ||||||||||| |||||||||||||| Sbjct: 823 gatttctatgtacgtgtgtttgttcg 848
>gb|AY458633.1| Uncultured bacterium 313 clone EBAC750-11E01 genomic sequence Length = 27088 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2011 taactttttgttcgtcaatctt 2032 |||||||||||||||||||||| Sbjct: 26907 taactttttgttcgtcaatctt 26928
>ref|XM_533897.2| PREDICTED: Canis familiaris similar to Probable N(2),N(2)-dimethylguanosine tRNA methyltransferase (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA 2,2-dimethylguanosine-26 methyltransferase) (tRNA(m(2,2)G26)dimethyltransferase) (LOC476692), mRNA Length = 1842 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1594 tgggacatcatgcgctgctggg 1615 |||||||||||||||||||||| Sbjct: 1303 tgggacatcatgcgctgctggg 1324
>emb|CR847925.24| Zebrafish DNA sequence from clone DKEY-238I5 in linkage group 11, complete sequence Length = 157270 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1594 tgggacatcatgcgctgctgggtga 1618 ||||| ||||||||||||||||||| Sbjct: 77890 tgggatatcatgcgctgctgggtga 77866
>gb|BC123064.1| Xenopus tropicalis hypothetical protein LOC779562, mRNA (cDNA clone IMAGE:7803943), partial cds Length = 2145 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1591 atttgggacatcatgcgctgctggg 1615 ||||||||||| ||||||||||||| Sbjct: 1453 atttgggacattatgcgctgctggg 1477
>gb|AC152947.1| Mus musculus 10 BAC RP23-12H20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222139 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2089 tgacatgttttgagcaatgaa 2109 ||||||||||||||||||||| Sbjct: 96691 tgacatgttttgagcaatgaa 96671
>gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosome 8, complete sequence Length = 207406 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1594 tgggacatcatgcgctgctgggtga 1618 |||||||||||||| |||||||||| Sbjct: 42933 tgggacatcatgcgttgctgggtga 42957
>gb|AC126590.5| Rattus norvegicus X BAC CH230-211O11 (Children's Hospital Oakland Research Institute) complete sequence Length = 159004 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1695 aaatttctctagagcagttgc 1715 ||||||||||||||||||||| Sbjct: 20848 aaatttctctagagcagttgc 20868
>ref|XM_848127.1| PREDICTED: Canis familiaris similar to NADH-ubiquinone oxidoreductase B9 subunit (Complex I-B9) (CI-B9) (LOC610593), mRNA Length = 403 Score = 42.1 bits (21), Expect = 8.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1160 gctgtgattctttccatcttcagtccctt 1188 ||||||||||| |||||||||||||||| Sbjct: 175 gctgtgattctgcccatcttcagtccctt 203
>gb|AC002550.1|HUAC002550 Human Chromosome 16 BAC clone CIT987SK-A-101F10, complete sequence Length = 86156 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 ctgctttaactcagcatgatg 460 ||||||||||||||||||||| Sbjct: 58820 ctgctttaactcagcatgatg 58800
>gb|AC004626.1|HUAC004626 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-427H10, complete sequence Length = 157838 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1431 cattccattattttttagtctccat 1455 ||||||||||||||||||| ||||| Sbjct: 142769 cattccattattttttagtttccat 142745
>gb|AC124544.4| Mus musculus BAC clone RP23-266K17 from 8, complete sequence Length = 150266 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1052 tctctgtgtttatggatttct 1072 ||||||||||||||||||||| Sbjct: 8201 tctctgtgtttatggatttct 8221
>gb|AC002382.1| Homo sapiens BAC clone CTB-22J17 from 7, complete sequence Length = 125590 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 667 aatgataaagcttctgttgaa 687 ||||||||||||||||||||| Sbjct: 49480 aatgataaagcttctgttgaa 49460
>ref|XM_849149.1| PREDICTED: Canis familiaris similar to NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa (LOC611480), mRNA Length = 615 Score = 42.1 bits (21), Expect = 8.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1160 gctgtgattctttccatcttcagtccctt 1188 ||||||||||| |||||||||||||||| Sbjct: 388 gctgtgattctgcccatcttcagtccctt 416
>gb|AC130459.2| Homo sapiens chromosome 1 clone CTA-427H10, complete sequence Length = 157462 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1431 cattccattattttttagtctccat 1455 ||||||||||||||||||| ||||| Sbjct: 15070 cattccattattttttagtttccat 15094
>gb|AC161005.4| Pan troglodytes BAC clone CH251-668M6 from chromosome 7, complete sequence Length = 217746 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 667 aatgataaagcttctgttgaa 687 ||||||||||||||||||||| Sbjct: 101669 aatgataaagcttctgttgaa 101689
>dbj|AK039362.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330032E09 product:unclassifiable, full insert sequence Length = 2096 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2089 tgacatgttttgagcaatgaa 2109 ||||||||||||||||||||| Sbjct: 491 tgacatgttttgagcaatgaa 511
>gb|AC096743.3| Homo sapiens BAC clone RP11-356M17 from 4, complete sequence Length = 103765 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1050 tctctctgtgtttatggattt 1070 ||||||||||||||||||||| Sbjct: 87023 tctctctgtgtttatggattt 87003
>gb|AC099495.2| Homo sapiens chromosome 16 clone RP11-1145B23, complete sequence Length = 161750 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1431 cattccattattttttagtctccat 1455 ||||||||||||||||||| ||||| Sbjct: 156439 cattccattattttttagtttccat 156463
>gb|AC161386.4| Pan troglodytes BAC clone CH251-497P4 from chromosome 7, complete sequence Length = 193048 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 667 aatgataaagcttctgttgaa 687 ||||||||||||||||||||| Sbjct: 168376 aatgataaagcttctgttgaa 168396
>emb|CR380954.1| Candida glabrata strain CBS138 chromosome H complete sequence Length = 1050361 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 aagggctttgagatcaagaaggaag 238 |||||||||||||| |||||||||| Sbjct: 822521 aagggctttgagatgaagaaggaag 822497
>gb|AC005546.1|AC005546 Homo sapiens chromosome 19, cosmid R29425, complete sequence Length = 41172 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1594 tgggacatcatgcgctgctgggtga 1618 |||||||||||||| |||||||||| Sbjct: 15426 tgggacatcatgcgttgctgggtga 15402
>emb|AL844518.5| Zebrafish DNA sequence from clone DKEY-83D9 in linkage group 21 Contains novel genes similar to vertebrate AQP3 (aquaporin 3),human and mouse VPS29 (vacuolar protein sorting 29 (yeast)), to human MGC14560 (x 0004 protein), human and mouse ARPC3 (actin related protein 2/3 complex, subunit 3, 21kDa), human UBE2G1 (ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)), vertebrate ATP2A2 (ATPase, Ca++ transporting, cardiac muscle, slow twitch 2), human BCR (breakpoint cluster region) and three CpG islands, complete sequence Length = 242235 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1768 gaaagtcactggggtccaaag 1788 ||||||||||||||||||||| Sbjct: 6093 gaaagtcactggggtccaaag 6073
>gb|AC137783.3| Homo sapiens chromosome 1 clone RP11-124P23, complete sequence Length = 198742 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1431 cattccattattttttagtctccat 1455 ||||||||||||||||||| ||||| Sbjct: 35156 cattccattattttttagtttccat 35132
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2010 gtaactttttgttcgtcaatc 2030 ||||||||||||||||||||| Sbjct: 1642379 gtaactttttgttcgtcaatc 1642399
>emb|BX324160.11| Zebrafish DNA sequence from clone CH211-217K11 in linkage group 10, complete sequence Length = 61409 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2041 ttgttgtttctttcttgtgag 2061 ||||||||||||||||||||| Sbjct: 52440 ttgttgtttctttcttgtgag 52420
>gb|AC137788.3| Homo sapiens chromosome 16 clone RP11-207M10, complete sequence Length = 158420 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1431 cattccattattttttagtctccat 1455 ||||||||||||||||||| ||||| Sbjct: 50479 cattccattattttttagtttccat 50503
>gb|AC136634.2| Homo sapiens chromosome 1 clone RP11-95C20, complete sequence Length = 176981 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1431 cattccattattttttagtctccat 1455 ||||||||||||||||||| ||||| Sbjct: 107699 cattccattattttttagtttccat 107675
>ref|XM_447164.1| Candida glabrata CBS138, CAGL0H08393g partial mRNA Length = 1839 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 214 aagggctttgagatcaagaaggaag 238 |||||||||||||| |||||||||| Sbjct: 524 aagggctttgagatgaagaaggaag 500
>emb|AL953892.7| Zebrafish DNA sequence from clone CH211-209C6 in linkage group 21, complete sequence Length = 202472 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1768 gaaagtcactggggtccaaag 1788 ||||||||||||||||||||| Sbjct: 99709 gaaagtcactggggtccaaag 99689
>gb|AC134615.5| Mus musculus BAC clone RP23-148H3 from 8, complete sequence Length = 199454 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1052 tctctgtgtttatggatttct 1072 ||||||||||||||||||||| Sbjct: 150128 tctctgtgtttatggatttct 150148
>emb|AL691509.6| Mouse DNA sequence from clone RP23-222A18 on chromosome 4, complete sequence Length = 217607 Score = 42.1 bits (21), Expect = 8.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1137 ttcttatgtatatcaatgtgt 1157 ||||||||||||||||||||| Sbjct: 113163 ttcttatgtatatcaatgtgt 113183
>gb|AC145556.4| Mus musculus BAC clone RP23-308E7 from chromosome 8, complete sequence Length = 178400 Score = 42.1 bits (21), Expect = 8.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1594 tgggacatcatgcgctgctgggtga 1618 |||||||||||||| |||||||||| Sbjct: 168639 tgggacatcatgcgttgctgggtga 168663 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 405,315,562 Number of extensions: 21149135 Number of successful extensions: 112255 Number of sequences better than 10.0: 56 Number of HSP's gapped: 112241 Number of HSP's successfully gapped: 126 Length of query: 2149 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2126 Effective length of database: 18,503,978,556 Effective search space: 39339458410056 Effective search space used: 39339458410056 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
