ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf53a13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q39214:RPM1_ARATH Disease resistance protein RPM1 - Arabidopsis ... 33 0.072
2Q8W3K0:DRL9_ARATH Probable disease resistance protein At1g58602 ... 35 1.00
3Q9SI85:DRL14_ARATH Probable disease resistance protein At1g62630... 32 1.2
4Q9STE7:R13L3_ARATH Putative disease resistance RPP13-like protei... 26 1.9
5Q9FJB5:RP8L3_ARATH Disease resistance RPP8-like protein 3 - Arab... 33 2.2
6Q8W3J8:DRL10_ARATH Probable disease resistance protein RDL5/RF45... 33 2.2
7P59584:RP8HA_ARATH Disease resistance protein RPH8A - Arabidopsi... 33 2.9
8Q38834:R13L4_ARATH Disease resistance RPP13-like protein 4 - Ara... 33 2.9
9Q9LMP6:DRL3_ARATH Probable disease resistance protein At1g15890 ... 32 8.4

>Q39214:RPM1_ARATH Disease resistance protein RPM1 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 926
 Score = 33.5 bits (75), Expect(2) = 0.072
 Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 8/47 (17%)
 Frame = -2

Query: 578 LKIV-----LSFYDLP---SHYLLHVSIYPEDYKIKRDQFI*RWMAE 462
           LKIV     LSF DLP       L+ S++P +Y++KR + I  WMA+
Sbjct: 413 LKIVRSIMFLSFNDLPYPLKRCFLYCSLFPVNYRMKRKRLIRMWMAQ 459



 Score = 23.9 bits (50), Expect(2) = 0.072
 Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -1

Query: 414 SYFNELINRSMIQPVDIT-IKAEKSYDVHDMMLDL 313
           SY NEL+ R+M+Q +        K++ +HD++ ++
Sbjct: 476 SYLNELVYRNMLQVILWNPFGRPKAFKMHDVIWEI 510



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>Q8W3K0:DRL9_ARATH Probable disease resistance protein At1g58602 - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 1138

 Score = 34.7 bits (78), Expect = 1.00
 Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
 Frame = -2

Query: 566 LSFYDLPS---HYLLHVSIYPEDYKIKRDQFI*RWMAEDL 456
           LSF +LPS   H  L+++ +PEDY+IK +     W AE++
Sbjct: 419 LSFEELPSYLKHCFLYLAHFPEDYEIKVENLSYYWAAEEI 458



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>Q9SI85:DRL14_ARATH Probable disease resistance protein At1g62630 - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 893

 Score = 32.0 bits (71), Expect(2) = 1.2
 Identities = 11/27 (40%), Positives = 20/27 (74%)
 Frame = -2

Query: 536 LLHVSIYPEDYKIKRDQFI*RWMAEDL 456
           LL+ ++YPED KI+++  I  W+ E++
Sbjct: 408 LLYCALYPEDAKIRKEDLIEHWICEEI 434



 Score = 21.2 bits (43), Expect(2) = 1.2
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -1

Query: 366 ITIKAEKSYDVHDMMLDLIYWLRRE 292
           + +K + S  +HD++ ++  W+  E
Sbjct: 465 VDLKGKSSVIMHDVVREMALWIASE 489



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>Q9STE7:R13L3_ARATH Putative disease resistance RPP13-like protein 3 - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 847

 Score = 26.2 bits (56), Expect(2) = 1.9
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -2

Query: 533 LHVSIYPEDYKIKRDQFI*RWMAE 462
           L+ S++PEDY+IK ++ I   +AE
Sbjct: 422 LYFSVFPEDYEIKVEKLIHLLVAE 445



 Score = 26.2 bits (56), Expect(2) = 1.9
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -1

Query: 411 YFNELINRSMIQPVDITIKAEKSYDVHDMMLDLIYWLRRETPMA-MFNLQEH 259
           Y +EL++RS+++   I      S  +HD++ DL     +E     ++N ++H
Sbjct: 463 YIDELVDRSLVKAERIERGKVMSCRIHDLLRDLAIKKAKELNFVNVYNEKQH 514



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>Q9FJB5:RP8L3_ARATH Disease resistance RPP8-like protein 3 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 901

 Score = 33.5 bits (75), Expect = 2.2
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
 Frame = -2

Query: 566 LSFYDLPS---HYLLHVSIYPEDYKIKRDQFI*RWMAEDL 456
           LS+ DLP+   H  L+++ +PEDYKIK       W AE +
Sbjct: 408 LSYEDLPTDLKHCFLYLAHFPEDYKIKTRTLYSYWAAEGI 447



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>Q8W3J8:DRL10_ARATH Probable disease resistance protein RDL5/RF45 - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 855

 Score = 33.5 bits (75), Expect = 2.2
 Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = -2

Query: 566 LSFYDLPS---HYLLHVSIYPEDYKIKRDQFI*RWMAEDL 456
           LSF +LPS   H  L+++ +PEDY+IK +     W AE +
Sbjct: 415 LSFEELPSYLKHCFLYLAHFPEDYEIKVENLSYYWAAEGI 454



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>P59584:RP8HA_ARATH Disease resistance protein RPH8A - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 910

 Score = 33.1 bits (74), Expect = 2.9
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
 Frame = -2

Query: 566 LSFYDLPSHY---LLHVSIYPEDYKIKRDQFI*RWMAEDL 456
           LS+ DLP+H     LH++ YPED KI        W AE +
Sbjct: 414 LSYEDLPTHLKHCFLHLAHYPEDSKIYTQDLFNYWAAEGI 453



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>Q38834:R13L4_ARATH Disease resistance RPP13-like protein 4 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 852

 Score = 33.1 bits (74), Expect = 2.9
 Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
 Frame = -2

Query: 566 LSFYDLPSHY---LLHVSIYPEDYKIKRDQFI*RWMAE 462
           LS+ +LPSH    +L +S+YPED  I + Q +  W+ E
Sbjct: 406 LSYDELPSHLKSCILTLSLYPEDCVIPKQQLVHGWIGE 443



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>Q9LMP6:DRL3_ARATH Probable disease resistance protein At1g15890 - Arabidopsis|
           thaliana (Mouse-ear cress)
          Length = 921

 Score = 31.6 bits (70), Expect = 8.4
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = -2

Query: 533 LHVSIYPEDYKIKRDQFI*RWMAE 462
           L+ S++PEDY++++++ I  WM E
Sbjct: 480 LYCSLFPEDYEVRKEELIEYWMCE 503


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 215,334,426
Number of extensions: 4201149
Number of successful extensions: 8881
Number of sequences better than 10.0: 9
Number of HSP's gapped: 8881
Number of HSP's successfully gapped: 12
Length of query: 471
Length of database: 100,686,439
Length adjustment: 117
Effective length of query: 354
Effective length of database: 68,593,924
Effective search space: 24282249096
Effective search space used: 24282249096
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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