ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf50h04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK064106:Os11g0707700 104 3e-23
2AK111610:Os09g0272900 33 0.071
3Os07g0144900:Os07g0144900 31 0.35
4AK068757: 28 2.3
5AK068762:Os02g0775600 28 2.3
6AK058592:Os02g0775600 28 2.3
7Os09g0392700:Os09g0392700 28 3.0
8Os08g0548400:Os08g0548400 28 3.0
9AK108265:Os03g0114100 28 3.9
10AK070526:Os02g0592500 28 3.9
11AK119745: 27 5.1
12AK064380:Os09g0314400 27 5.1
13AK100502: 27 6.6
14AK100989:Os04g0103900 27 6.6
15AK071428:Os01g0561500 27 6.6
16AK066800:Os10g0377800 27 6.6
17Os09g0431600:Os09g0431600 27 8.7

>AK064106:Os11g0707700 |
          Length = 124
 Score =  104 bits (260), Expect = 3e-23
 Identities = 55/101 (54%), Positives = 72/101 (71%), Gaps = 3/101 (2%)
 Frame = +2

Query: 62  DGETASEMVKLISAEGHEFYISKKCAMVSGTIRAMLS--GQFTESK-GEITFPDISAPIL 232
           D +  S  VKLISAEG EF + KK AMVS T+R ML+  G F+E++ GE+ FP+IS PIL
Sbjct: 24  DDDAPSGFVKLISAEGFEFVVDKKAAMVSNTLRNMLTSPGGFSETREGEVRFPEISTPIL 83

Query: 233 EKVCQYMYYKTQFTDSTSRFPDFLIEPEVAMELLMAANYLD 355
           EK+CQY Y+   ++ S     +F IEPE+ +EL+MAANYLD
Sbjct: 84  EKICQYFYWSLHYS-SGKETSEFQIEPEITLELMMAANYLD 123



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>AK111610:Os09g0272900 |
          Length = 198

 Score = 33.5 bits (75), Expect = 0.071
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +2

Query: 50  AMAQDGETASEMVKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGEITFPDISAPI 229
           A  +    A EMV LIS++G  F + +    +S T+   +      +   I  P+++  +
Sbjct: 27  APQETNAAAGEMVTLISSDGARFEVPEAAVRLSQTVLDEMKKDDYNAINGIPLPNVAGDV 86

Query: 230 LEKVCQY 250
           L KV +Y
Sbjct: 87  LAKVVEY 93



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>Os07g0144900:Os07g0144900 |
          Length = 172

 Score = 31.2 bits (69), Expect = 0.35
 Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 16/108 (14%)
 Frame = +2

Query: 80  EMVKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGEITFPDISAPILEKVCQYMYY 259
           +M+ LISA+G  F +++  A  S  I  M+    TE+   +  P++   IL  V  Y   
Sbjct: 15  KMIILISADGKRFEVTEAVASQSQLISNMIEDDCTEN--GVRLPNVDGDILTMVVDYCNM 72

Query: 260 ---------KTQFTDST----SRFPDFLI---EPEVAMELLMAANYLD 355
                     T    ST     +F   L+   E  V  +L++AAN+L+
Sbjct: 73  HAGDAAAAGDTMKASSTEEELKKFDAELVQALENPVLFKLILAANFLN 120



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>AK068757: |
          Length = 1056

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 12/54 (22%), Positives = 29/54 (53%)
 Frame = -2

Query: 310 LNEKVGKARRAVRELSLVVHVLADFFKDGRANVGERDLALAFRELAAQHCADCA 149
           L+EK+GK ++ + +   V+H L + + +  + + E++  +     + +   DCA
Sbjct: 486 LSEKLGKTQKDLEDTKNVLHDLEEKYNEAESTIKEKEYVIFNLLKSEKSLVDCA 539



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>AK068762:Os02g0775600 |
          Length = 279

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -2

Query: 430 ENG*KETRSAKKRVSSRRCKRACSAVEVVGGHEQLHRDLGLNEKVGKARRAVRELSLVVH 251
           +NG   T +A+++     C R     + +GGH+  H+      +   A+RA  + SL +H
Sbjct: 77  KNGGAATAAAERKFECHYCCRNFPTSQALGGHQNAHK-----RERQHAKRAHLQASLAMH 131



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>AK058592:Os02g0775600 |
          Length = 279

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -2

Query: 430 ENG*KETRSAKKRVSSRRCKRACSAVEVVGGHEQLHRDLGLNEKVGKARRAVRELSLVVH 251
           +NG   T +A+++     C R     + +GGH+  H+      +   A+RA  + SL +H
Sbjct: 77  KNGGAATAAAERKFECHYCCRNFPTSQALGGHQNAHK-----RERQHAKRAHLQASLAMH 131



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>Os09g0392700:Os09g0392700 |
          Length = 384

 Score = 28.1 bits (61), Expect = 3.0
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +2

Query: 260 KTQFTDSTSRFPDFLIEPEVAMELLMAANYLDC*TGSLASSRRHP 394
           K  F D+ SR P FLI   V ++++   NY    T S+ S  R P
Sbjct: 143 KNYFYDAWSRLPAFLI---VRVDIIAPPNYYRPHTSSVCSRTRRP 184



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>Os08g0548400:Os08g0548400 |
          Length = 198

 Score = 28.1 bits (61), Expect = 3.0
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = +3

Query: 15  SNRAPPYRTQDAPWPRTERPRARWSSSSVPRATSFTLAKSAP 140
           S+ A P+R  + PW R+   R R S+S  P  +SF L  SAP
Sbjct: 17  SSSAGPHRDANNPWCRSPILRDR-SASCPPFLSSFLLMISAP 57



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>AK108265:Os03g0114100 |
          Length = 108

 Score = 27.7 bits (60), Expect = 3.9
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 12  FSNRAPPYRTQDAPWPRTERPRARWSSSSVPRATSFTLAKSAP-WSRAQSAQC 167
           ++  A P+R   AP     RPR R SS S     S +   +AP WS A   +C
Sbjct: 3   WTTAATPWRPPSAPSTSASRPRRRPSSRS-----STSRPSAAPRWSSACDCEC 50



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>AK070526:Os02g0592500 |
          Length = 297

 Score = 27.7 bits (60), Expect = 3.9
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -2

Query: 232 KDGRANVGERDLALAFRELAAQHCADCARDHGALFANVKLVALG 101
           + GRA  G RDLAL  R      C D ++   AL +  KL + G
Sbjct: 55  RPGRAAKGRRDLALC-RVFRQNTCCDVSQTFSALLSVRKLASTG 97



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>AK119745: |
          Length = 808

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 9   SFSNRAPPYRTQDAPWPRTERPRARWSSSSVPRATSF 119
           +++ +APPY +Q     +T R R R SS S PR  SF
Sbjct: 227 TYTRQAPPYASQGPAVVQTARTR-RSSSVSRPRPQSF 262



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>AK064380:Os09g0314400 |
          Length = 367

 Score = 27.3 bits (59), Expect = 5.1
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 8/41 (19%)
 Frame = -2

Query: 433 LENG*KETRSA--------KKRVSSRRCKRACSAVEVVGGH 335
           ++N  KET SA        K+ V  RRCK  C+AV +V  H
Sbjct: 327 VQNQLKETSSATLAVRRLVKEAVRERRCKDNCTAVLIVFKH 367



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>AK100502: |
          Length = 620

 Score = 26.9 bits (58), Expect = 6.6
 Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -2

Query: 163 CADCARDHGALFANVKLVALGTD-ELDHLARGLSVLGH 53
           C     DHG++   + +  + T+  ++HLA+ +S++GH
Sbjct: 497 CFPFKGDHGSIVIRLAVPVVPTEFVVEHLAKSISIVGH 534



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>AK100989:Os04g0103900 |
          Length = 393

 Score = 26.9 bits (58), Expect = 6.6
 Identities = 30/105 (28%), Positives = 40/105 (38%), Gaps = 12/105 (11%)
 Frame = -2

Query: 328 LHRDLGLNEKVGKARRAVRELSLVVHVLADFFKDGRANV------GERD------LALAF 185
           LHRD+        AR A    SLV   + +  KD    V      G RD      L L  
Sbjct: 267 LHRDVA-------ARVAASMESLVKKAMVE--KDWNEEVFWLVHPGGRDILDRVVLTLGL 317

Query: 184 RELAAQHCADCARDHGALFANVKLVALGTDELDHLARGLSVLGHG 50
           R+     C +  R HG   ++  ++A+         RGLS  G G
Sbjct: 318 RDDKVAVCREVMRQHGNTLSSCVIMAMEEMRRRSAERGLSTAGEG 362



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>AK071428:Os01g0561500 |
          Length = 212

 Score = 26.9 bits (58), Expect = 6.6
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 24  APPYRTQDAPWPRTERPRARWSSSSVPRATSFTLAKSAPWSR 149
           +PP+R   +P PR  RP    ++ +  RA S +L    P SR
Sbjct: 73  SPPHRLLSSPVPRAPRPAPPSTADAATRAVS-SLPSPRPESR 113



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>AK066800:Os10g0377800 |
          Length = 548

 Score = 26.9 bits (58), Expect = 6.6
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +3

Query: 15  SNRAPPYRTQDAPWPRTERPRARWSSSSVPRATSFTLAKSAPWSRAQSA 161
           S+  PP     +  PR+  PR R       RA   T A+   W RA ++
Sbjct: 30  SSPTPPPPPHSSSLPRSPSPRPRLPLPPPRRAALVTAAQDPRWRRAMAS 78



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>Os09g0431600:Os09g0431600 |
          Length = 567

 Score = 26.6 bits (57), Expect = 8.7
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +3

Query: 15  SNRAPPYRTQDAPWPRTERPRARWSSSSVP 104
           S+R P   +  AP PR  R R R  SSS P
Sbjct: 24  SSRLPSSSSSSAPPPRARRRRRRAPSSSPP 53


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 13,413,300
Number of extensions: 304726
Number of successful extensions: 1047
Number of sequences better than 10.0: 17
Number of HSP's gapped: 1043
Number of HSP's successfully gapped: 17
Length of query: 158
Length of database: 15,399,855
Length adjustment: 92
Effective length of query: 66
Effective length of database: 11,716,083
Effective search space: 773261478
Effective search space used: 773261478
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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