ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf50h04 |
|---|---|
| Clone Library Name | barley_pub |
>P83941:ELOC_RAT Transcription elongation factor B polypeptide 1 - Rattus norvegicus| (Rat) Length = 112 Score = 103 bits (258), Expect = 2e-22 Identities = 50/94 (53%), Positives = 72/94 (76%), Gaps = 3/94 (3%) Frame = +2 Query: 86 VKLISAEGHEFYISKKCAMVSGTIRAMLSG--QFTESK-GEITFPDISAPILEKVCQYMY 256 VKLIS++GHEF + ++ A+ SGTI+AMLSG QF E++ E+ F +I + +L KVC Y Sbjct: 19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT 78 Query: 257 YKTQFTDSTSRFPDFLIEPEVAMELLMAANYLDC 358 YK ++T+S++ P+F I PE+A+ELLMAAN+LDC Sbjct: 79 YKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>P83940:ELOC_MOUSE Transcription elongation factor B polypeptide 1 - Mus musculus| (Mouse) Length = 112 Score = 103 bits (258), Expect = 2e-22 Identities = 50/94 (53%), Positives = 72/94 (76%), Gaps = 3/94 (3%) Frame = +2 Query: 86 VKLISAEGHEFYISKKCAMVSGTIRAMLSG--QFTESK-GEITFPDISAPILEKVCQYMY 256 VKLIS++GHEF + ++ A+ SGTI+AMLSG QF E++ E+ F +I + +L KVC Y Sbjct: 19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT 78 Query: 257 YKTQFTDSTSRFPDFLIEPEVAMELLMAANYLDC 358 YK ++T+S++ P+F I PE+A+ELLMAAN+LDC Sbjct: 79 YKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>Q15369:ELOC_HUMAN Transcription elongation factor B polypeptide 1 - Homo sapiens| (Human) Length = 112 Score = 103 bits (258), Expect = 2e-22 Identities = 50/94 (53%), Positives = 72/94 (76%), Gaps = 3/94 (3%) Frame = +2 Query: 86 VKLISAEGHEFYISKKCAMVSGTIRAMLSG--QFTESK-GEITFPDISAPILEKVCQYMY 256 VKLIS++GHEF + ++ A+ SGTI+AMLSG QF E++ E+ F +I + +L KVC Y Sbjct: 19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT 78 Query: 257 YKTQFTDSTSRFPDFLIEPEVAMELLMAANYLDC 358 YK ++T+S++ P+F I PE+A+ELLMAAN+LDC Sbjct: 79 YKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>Q2KII4:ELOC_BOVIN Transcription elongation factor B polypeptide 1 - Bos taurus| (Bovine) Length = 112 Score = 103 bits (258), Expect = 2e-22 Identities = 50/94 (53%), Positives = 72/94 (76%), Gaps = 3/94 (3%) Frame = +2 Query: 86 VKLISAEGHEFYISKKCAMVSGTIRAMLSG--QFTESK-GEITFPDISAPILEKVCQYMY 256 VKLIS++GHEF + ++ A+ SGTI+AMLSG QF E++ E+ F +I + +L KVC Y Sbjct: 19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT 78 Query: 257 YKTQFTDSTSRFPDFLIEPEVAMELLMAANYLDC 358 YK ++T+S++ P+F I PE+A+ELLMAAN+LDC Sbjct: 79 YKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>Q03071:ELOC_YEAST Elongin-C - Saccharomyces cerevisiae (Baker's yeast)| Length = 99 Score = 73.6 bits (179), Expect = 3e-13 Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 3/96 (3%) Frame = +2 Query: 74 ASEMVKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGEITFPDISAPILEKVCQYM 253 + + V L+S + E+ IS+ AM+S T++AM+ G F ESKG I + ILEK +Y+ Sbjct: 2 SQDFVTLVSKDDKEYEISRSAAMISPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEYL 61 Query: 254 YYKTQF---TDSTSRFPDFLIEPEVAMELLMAANYL 352 Y ++ ++ P+F I E+++ELL+AA+YL Sbjct: 62 NYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYL 97
>Q751F9:ELOC_ASHGO Elongin-C - Ashbya gossypii (Yeast) (Eremothecium gossypii)| Length = 100 Score = 67.8 bits (164), Expect = 2e-11 Identities = 35/97 (36%), Positives = 59/97 (60%), Gaps = 3/97 (3%) Frame = +2 Query: 71 TASEMVKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESK-GEITFPDISAPILEKVCQ 247 T + V L+S++G F + ++ AM+S T+ ML F E+K ++T P I + +L KV + Sbjct: 2 TPTSHVTLVSSDGKSFEVPRERAMLSPTLAKMLDSSFAEAKEAKVTLPTIESSMLAKVVE 61 Query: 248 YMYYKTQFT--DSTSRFPDFLIEPEVAMELLMAANYL 352 Y+ Y ++ D P F + PE+++ELL+AA+YL Sbjct: 62 YLEYLEEYKHKDDGEDIPQFEVPPEISLELLLAADYL 98
>P52285:FP21_DICDI Glycoprotein FP21 precursor - Dictyostelium discoideum (Slime mold)| Length = 162 Score = 42.7 bits (99), Expect = 6e-04 Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 15/106 (14%) Frame = +2 Query: 83 MVKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGEITFPDISAPILEKVCQYMYYK 262 +VKL S++ F I K+ A +S TI+ M+ ES I P++++ ILEKV Y + Sbjct: 3 LVKLESSDEKVFEIEKEIACMSVTIKNMIE-DIGESDSPIPLPNVTSTILEKVLDYCRHH 61 Query: 263 TQFTD-------STSRFPDF--------LIEPEVAMELLMAANYLD 355 Q R D ++ EL++AANYLD Sbjct: 62 HQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLD 107
>Q71U00:SKP1_XENLA S-phase kinase-associated protein 1A - Xenopus laevis (African| clawed frog) Length = 163 Score = 40.4 bits (93), Expect = 0.003 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 18/108 (16%) Frame = +2 Query: 86 VKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGE---ITFPDISAPILEKVCQYMY 256 +KL S++G F + + A S TI+ ML + +G+ + P+++A IL+KV Q+ Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63 Query: 257 Y-------------KTQFTDSTSRFP-DFL-IEPEVAMELLMAANYLD 355 + K + TD + +FL ++ EL++AANYLD Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111
>Q6PEC4:SKP1_RAT S-phase kinase-associated protein 1A - Rattus norvegicus (Rat)| Length = 163 Score = 40.4 bits (93), Expect = 0.003 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 18/108 (16%) Frame = +2 Query: 86 VKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGE---ITFPDISAPILEKVCQYMY 256 +KL S++G F + + A S TI+ ML + +G+ + P+++A IL+KV Q+ Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63 Query: 257 Y-------------KTQFTDSTSRFP-DFL-IEPEVAMELLMAANYLD 355 + K + TD + +FL ++ EL++AANYLD Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111
>Q5R512:SKP1_PONPY S-phase kinase-associated protein 1A - Pongo pygmaeus (Orangutan)| Length = 163 Score = 40.4 bits (93), Expect = 0.003 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 18/108 (16%) Frame = +2 Query: 86 VKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGE---ITFPDISAPILEKVCQYMY 256 +KL S++G F + + A S TI+ ML + +G+ + P+++A IL+KV Q+ Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63 Query: 257 Y-------------KTQFTDSTSRFP-DFL-IEPEVAMELLMAANYLD 355 + K + TD + +FL ++ EL++AANYLD Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111
>Q9WTX5:SKP1_MOUSE S-phase kinase-associated protein 1A - Mus musculus (Mouse)| Length = 163 Score = 40.4 bits (93), Expect = 0.003 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 18/108 (16%) Frame = +2 Query: 86 VKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGE---ITFPDISAPILEKVCQYMY 256 +KL S++G F + + A S TI+ ML + +G+ + P+++A IL+KV Q+ Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63 Query: 257 Y-------------KTQFTDSTSRFP-DFL-IEPEVAMELLMAANYLD 355 + K + TD + +FL ++ EL++AANYLD Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111
>Q4R5B9:SKP1_MACFA S-phase kinase-associated protein 1A - Macaca fascicularis (Crab| eating macaque) (Cynomolgus monkey) Length = 163 Score = 40.4 bits (93), Expect = 0.003 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 18/108 (16%) Frame = +2 Query: 86 VKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGE---ITFPDISAPILEKVCQYMY 256 +KL S++G F + + A S TI+ ML + +G+ + P+++A IL+KV Q+ Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63 Query: 257 Y-------------KTQFTDSTSRFP-DFL-IEPEVAMELLMAANYLD 355 + K + TD + +FL ++ EL++AANYLD Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111
>P63208:SKP1_HUMAN S-phase kinase-associated protein 1A - Homo sapiens (Human)| Length = 163 Score = 40.4 bits (93), Expect = 0.003 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 18/108 (16%) Frame = +2 Query: 86 VKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGE---ITFPDISAPILEKVCQYMY 256 +KL S++G F + + A S TI+ ML + +G+ + P+++A IL+KV Q+ Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63 Query: 257 Y-------------KTQFTDSTSRFP-DFL-IEPEVAMELLMAANYLD 355 + K + TD + +FL ++ EL++AANYLD Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111
>Q5ZKF5:SKP1_CHICK S-phase kinase-associated protein 1A - Gallus gallus (Chicken)| Length = 163 Score = 40.4 bits (93), Expect = 0.003 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 18/108 (16%) Frame = +2 Query: 86 VKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGE---ITFPDISAPILEKVCQYMY 256 +KL S++G F + + A S TI+ ML + +G+ + P+++A IL+KV Q+ Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63 Query: 257 Y-------------KTQFTDSTSRFP-DFL-IEPEVAMELLMAANYLD 355 + K + TD + +FL ++ EL++AANYLD Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111
>P63209:SKP1_CAVPO S-phase kinase-associated protein 1A - Cavia porcellus (Guinea pig)| Length = 163 Score = 40.4 bits (93), Expect = 0.003 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 18/108 (16%) Frame = +2 Query: 86 VKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGE---ITFPDISAPILEKVCQYMY 256 +KL S++G F + + A S TI+ ML + +G+ + P+++A IL+KV Q+ Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63 Query: 257 Y-------------KTQFTDSTSRFP-DFL-IEPEVAMELLMAANYLD 355 + K + TD + +FL ++ EL++AANYLD Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111
>Q3ZCF3:SKP1_BOVIN S-phase kinase-associated protein 1A - Bos taurus (Bovine)| Length = 163 Score = 40.4 bits (93), Expect = 0.003 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 18/108 (16%) Frame = +2 Query: 86 VKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGE---ITFPDISAPILEKVCQYMY 256 +KL S++G F + + A S TI+ ML + +G+ + P+++A IL+KV Q+ Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63 Query: 257 Y-------------KTQFTDSTSRFP-DFL-IEPEVAMELLMAANYLD 355 + K + TD + +FL ++ EL++AANYLD Sbjct: 64 HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111
>Q39255:SKP1A_ARATH SKP1-like protein 1A - Arabidopsis thaliana (Mouse-ear cress)| Length = 160 Score = 33.5 bits (75), Expect = 0.36 Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 16/110 (14%) Frame = +2 Query: 74 ASEMVKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTESKGEITFPDISAPILEKVCQYM 253 +++ + L S++G F + + A+ S TI M+ ++ + P++++ IL KV +Y Sbjct: 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNG--VPLPNVTSKILAKVIEYC 59 Query: 254 YYKTQFTDSTSRF---------------PDFL-IEPEVAMELLMAANYLD 355 + S + DF+ I+ EL++AANYL+ Sbjct: 60 KRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLN 109
>Q6PRD1:GP179_HUMAN Probable G-protein coupled receptor 179 precursor - Homo sapiens| (Human) Length = 2367 Score = 33.5 bits (75), Expect = 0.36 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +3 Query: 15 SNRAPPYRTQDAPWPRTERPRARWSSSSVPR 107 + A P +T+ PW ER R W+S+ VPR Sbjct: 1582 AQEATPAKTEICPWEVNERTREEWTSAQVPR 1612
>Q8R0P8:ABHD8_MOUSE Abhydrolase domain-containing protein 8 - Mus musculus (Mouse)| Length = 439 Score = 33.5 bits (75), Expect = 0.36 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = +2 Query: 5 CIL--LKSCTALSNTGRAMAQDGETASEMVKLISAEGHEFYISKKCAMVSGTIRAMLSGQ 178 C+L L C A S A+ G +++K EG+ F +S S +RAM+SGQ Sbjct: 288 CVLHCLSPCLAWSFLKAGFARQGAKEKQLLK----EGNAFNVS------SFVLRAMMSGQ 337 Query: 179 FTESKGEITFPDISAPIL 232 + E+ +++ P+L Sbjct: 338 YWPEGDEVYHAELTVPVL 355
>Q4R584:ABHD8_MACFA Abhydrolase domain-containing protein 8 - Macaca fascicularis (Crab| eating macaque) (Cynomolgus monkey) Length = 440 Score = 33.5 bits (75), Expect = 0.36 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = +2 Query: 5 CIL--LKSCTALSNTGRAMAQDGETASEMVKLISAEGHEFYISKKCAMVSGTIRAMLSGQ 178 C+L L C A S A+ G +++K EG+ F +S S +RAM+SGQ Sbjct: 297 CVLHCLSPCLAWSFLKAGFARQGAKEKQLLK----EGNAFNVS------SFVLRAMMSGQ 346 Query: 179 FTESKGEITFPDISAPIL 232 + E+ +++ P+L Sbjct: 347 YWPEGDEVYHAELTVPVL 364
>Q96I13:ABHD8_HUMAN Abhydrolase domain-containing protein 8 - Homo sapiens (Human)| Length = 439 Score = 33.5 bits (75), Expect = 0.36 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = +2 Query: 5 CIL--LKSCTALSNTGRAMAQDGETASEMVKLISAEGHEFYISKKCAMVSGTIRAMLSGQ 178 C+L L C A S A+ G +++K EG+ F +S S +RAM+SGQ Sbjct: 296 CVLHCLSPCLAWSFLKAGFARQGAKEKQLLK----EGNAFNVS------SFVLRAMMSGQ 345 Query: 179 FTESKGEITFPDISAPIL 232 + E+ +++ P+L Sbjct: 346 YWPEGDEVYHAELTVPVL 363
>Q17QP1:ABHD8_BOVIN Abhydrolase domain-containing protein 8 - Bos taurus (Bovine)| Length = 432 Score = 33.5 bits (75), Expect = 0.36 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = +2 Query: 5 CIL--LKSCTALSNTGRAMAQDGETASEMVKLISAEGHEFYISKKCAMVSGTIRAMLSGQ 178 C+L L C A S A+ G +++K EG+ F +S S +RAM+SGQ Sbjct: 289 CVLHCLSPCLAWSFLKAGFARQGAKEKQLLK----EGNAFNVS------SFVLRAMMSGQ 338 Query: 179 FTESKGEITFPDISAPIL 232 + E+ +++ P+L Sbjct: 339 YWPEGDEVYHAELTVPVL 356
>Q6AX59:ABHD8_XENLA Abhydrolase domain-containing protein 8 - Xenopus laevis (African| clawed frog) Length = 424 Score = 33.1 bits (74), Expect = 0.47 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 2/103 (1%) Frame = +2 Query: 5 CIL--LKSCTALSNTGRAMAQDGETASEMVKLISAEGHEFYISKKCAMVSGTIRAMLSGQ 178 C+L L C A S A+ G ++++ EG+ F +S S +RAM+SGQ Sbjct: 287 CVLHCLSPCLAWSFLKAGFARQGAKEKQLLR----EGNAFNVS------SFVLRAMMSGQ 336 Query: 179 FTESKGEITFPDISAPILEKVCQYMYYKTQFTDSTSRFPDFLI 307 + E+ +++ PIL + M+ K D R + L+ Sbjct: 337 YWPEGDEVYHAELTVPIL--LVHGMHDKFVPLDEDQRMAEILL 377
>O95104:SFR15_HUMAN Splicing factor, arginine/serine-rich 15 - Homo sapiens (Human)| Length = 1147 Score = 31.6 bits (70), Expect = 1.4 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 10 PSQIVHRLIEHRTRHGPGRRDRERDGQAHQCR 105 P + HR +E R R G RDRERD + + R Sbjct: 1038 PDRDRHRDLEERNRRSSGHRDRERDSRDRESR 1069
>Q63627:SFR15_RAT Splicing factor, arginine/serine-rich 15 - Rattus norvegicus (Rat)| Length = 1048 Score = 30.8 bits (68), Expect = 2.3 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +1 Query: 10 PSQIVHRLIEHRTRHGPGRRDRERDGQAHQCR 105 P + HR +E R+R G RDR+RD + + R Sbjct: 940 PERDRHRDLEERSRRSSGHRDRDRDSRDRESR 971
>P58545:BTBD3_MOUSE BTB/POZ domain-containing protein 3 - Mus musculus (Mouse)| Length = 532 Score = 30.4 bits (67), Expect = 3.0 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +2 Query: 107 GHEFYISKKCAMVSGTIRAMLSGQFTESKGEITFPDISAPILEKVCQYMY 256 GH++ + A+ S AM G+ E K EI PD+ + +Y+Y Sbjct: 147 GHKYVL----AVGSSVFHAMFYGELAEDKDEIRIPDVEPAAFLAMLKYIY 192
>Q9Y2F9:BTBD3_HUMAN BTB/POZ domain-containing protein 3 - Homo sapiens (Human)| Length = 522 Score = 30.4 bits (67), Expect = 3.0 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +2 Query: 107 GHEFYISKKCAMVSGTIRAMLSGQFTESKGEITFPDISAPILEKVCQYMY 256 GH++ + A+ S AM G+ E K EI PD+ + +Y+Y Sbjct: 137 GHKYVL----AVGSSVFHAMFYGELAEDKDEIRIPDVEPAAFLAMLKYIY 182
>Q4V8C2:ZW10_RAT Centromere/kinetochore protein zw10 homolog - Rattus norvegicus| (Rat) Length = 777 Score = 30.0 bits (66), Expect = 3.9 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = +2 Query: 119 YISKKCAMVSGTIRAMLSGQFTESKG-----EITFPDISAPILEKVCQYMYYKTQFTDST 283 + +KKC V R +++ + + E T PD+ +P + Q K QFTD+ Sbjct: 398 FANKKCQDVIVAARHLMTSEIHNTVKIGPDCEETLPDLPSPDADHRLQVQVCKVQFTDAG 457 Query: 284 SRFPDFLIEP 313 + P+ ++P Sbjct: 458 NLEPETSLDP 467
>Q8QZ73:POLN_MAYAB Non-structural polyprotein - Mayaro virus (strain Brazil) (MAYV)| Length = 2436 Score = 30.0 bits (66), Expect = 3.9 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = -2 Query: 298 VGKARRAVRELSLVVHVLADFFKDGRANVGERDLALAFRELAAQ 167 VG A+ + + ++H + F + G+RDLA A+R +AA+ Sbjct: 1386 VGTAKTVKCDETYIIHAVGPNFNNTSEAEGDRDLAAAYRAVAAE 1429
>P28348:NIRA_EMENI Nitrogen assimilation transcription factor nirA - Emericella| nidulans (Aspergillus nidulans) Length = 892 Score = 30.0 bits (66), Expect = 3.9 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +3 Query: 30 PYRTQDAPWPRTERPRARWSSSSVPRATSFTLAKSAPWSRAQS 158 P T P P T+ + +W S + + +FT A S P + AQS Sbjct: 745 PVSTSYGPVPSTQSAQEQWYSPTEAQFRAFTAAHSMPTTSAQS 787
>O87653:HRPZ_PSEAP Harpin hrpZ - Pseudomonas syringae pv. aptata| Length = 342 Score = 30.0 bits (66), Expect = 3.9 Identities = 15/52 (28%), Positives = 28/52 (53%) Frame = +2 Query: 140 MVSGTIRAMLSGQFTESKGEITFPDISAPILEKVCQYMYYKTQFTDSTSRFP 295 ++SG ++ML T+ G +F + P+L K+ Q+M D+ ++FP Sbjct: 116 VLSGLAKSMLDDLLTKQDGGSSFSEDDMPMLSKIAQFM------DDNPAQFP 161
>Q74H90:RECF_GEOSL DNA replication and repair protein recF - Geobacter sulfurreducens| Length = 365 Score = 29.6 bits (65), Expect = 5.2 Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 1/96 (1%) Frame = -2 Query: 331 QLHRDL-GLNEKVGKARRAVRELSLVVHVLADFFKDGRANVGERDLALAFRELAAQHCAD 155 Q +RD+ G ++VG A R H LA + GERD A A REL A H A+ Sbjct: 203 QFYRDIAGAGQEVGLAYRC--------HGLA-------SAEGERDCAAALRELMAAHEAE 247 Query: 154 CARDHGALFANVKLVALGTDELDHLARGLSVLGHGA 47 R GA V D++D + G + HG+ Sbjct: 248 ELR-RGATG-----VGPHRDDVDFILNGRVIRHHGS 277
>Q64568:AT2B3_RAT Plasma membrane calcium-transporting ATPase 3 - Rattus norvegicus| (Rat) Length = 1258 Score = 29.6 bits (65), Expect = 5.2 Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = +2 Query: 35 SNTGRAMAQDGETASEMVKLISAEGHEF-YISKKCAMVSGTIRAMLSGQFTE 187 S+ +A QDG A EM L SAEG E KK A V +++L G+ T+ Sbjct: 315 SSQTKAKKQDGAVAMEMQPLKSAEGGEMEEREKKKANVPKKEKSVLQGKLTK 366
>Q8ZCX2:PPK_YERPE Polyphosphate kinase - Yersinia pestis| Length = 687 Score = 29.3 bits (64), Expect = 6.7 Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 9/125 (7%) Frame = -2 Query: 349 VVGGHEQLHRDLGLNEKVGKARRAVRELSLVVHVLADFFKDGRANVGERDLALAFRELAA 170 + GG +D VGK+ R + + HV D F++G + E+D+ L + Sbjct: 289 IAGGRYHNFKDFINFPNVGKSNLVNRPMPRLRHVWFDKFRNGFDAIREQDVLLYYPYHTF 348 Query: 169 QHCADCARDHG------ALFANVKLVALGT---DELDHLARGLSVLGHGASCVR*GGARF 17 +H + R A+ N+ VA + D + H A G + V ARF Sbjct: 349 EHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHN----GKKVTVVVELQARF 404 Query: 16 EKDAN 2 +++AN Sbjct: 405 DEEAN 409
>P35674:HRPZ_PSESY Harpin hrpZ - Pseudomonas syringae pv. syringae| Length = 341 Score = 29.3 bits (64), Expect = 6.7 Identities = 14/52 (26%), Positives = 28/52 (53%) Frame = +2 Query: 140 MVSGTIRAMLSGQFTESKGEITFPDISAPILEKVCQYMYYKTQFTDSTSRFP 295 +++G ++ML T+ G +F + P+L K+ Q+M D+ ++FP Sbjct: 115 VLNGLAKSMLDDLLTKQDGGTSFSEDDMPMLNKIAQFM------DDNPAQFP 160
>Q8VXV4:DNJ16_ARATH Chaperone protein dnaJ 16 - Arabidopsis thaliana (Mouse-ear cress)| Length = 436 Score = 29.3 bits (64), Expect = 6.7 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 7/57 (12%) Frame = +2 Query: 143 VSGTIRAMLSGQFTESKGEITFPDISAPILEKVCQYMYYKT-------QFTDSTSRF 292 VS TI+ + + FT+ K ++ + A IL K + ++T QFTD TSR+ Sbjct: 278 VSYTIQVLCAAAFTQEKEDLR--SVEAQILTKRAELAKFETEYREVLVQFTDMTSRY 332
>P00562:AK2H_ECOLI Bifunctional aspartokinase/homoserine dehydrogenase II -| Escherichia coli Length = 810 Score = 29.3 bits (64), Expect = 6.7 Identities = 14/34 (41%), Positives = 22/34 (64%) Frame = -2 Query: 310 LNEKVGKARRAVRELSLVVHVLADFFKDGRANVG 209 LNE++ + A RE+ LV+ +A F +G+A VG Sbjct: 718 LNEQMVQRLEAAREMGLVLRYVARFDANGKARVG 751
>P11506:AT2B2_RAT Plasma membrane calcium-transporting ATPase 2 - Rattus norvegicus| (Rat) Length = 1243 Score = 28.9 bits (63), Expect = 8.8 Identities = 20/54 (37%), Positives = 29/54 (53%) Frame = +2 Query: 26 TALSNTGRAMAQDGETASEMVKLISAEGHEFYISKKCAMVSGTIRAMLSGQFTE 187 +A S+ +A QDG A EM L SAEG + KK M +++L G+ T+ Sbjct: 340 SADSSQSKAKQQDGAAAMEMQPLKSAEGGDADDKKKANMHKKE-KSVLQGKLTK 392 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 81,437,236 Number of extensions: 1768670 Number of successful extensions: 5510 Number of sequences better than 10.0: 38 Number of HSP's gapped: 5502 Number of HSP's successfully gapped: 38 Length of query: 158 Length of database: 100,686,439 Length adjustment: 104 Effective length of query: 54 Effective length of database: 72,159,759 Effective search space: 3896626986 Effective search space used: 3896626986 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
