>Q94AH6:CUL1_ARATH Cullin-1 - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 738
 Score =  145 bits (367), Expect = 4e-34
 Identities = 92/290 (31%), Positives = 143/290 (49%), Gaps = 9/290 (3%)
 Frame = +2

Query: 281  LSFEDGWKVLEQGILTCSKILEGSTGTRPTVAEYMNCYDCAYRMAVQTT--SYCEEMYNG 454
            +  E GW  ++ GI    +ILEG         +YM  Y   Y M  Q     Y +++Y+ 
Sbjct: 6    IDLEQGWDYMQTGITKLKRILEGLNEPAFDSEQYMMLYTTIYNMCTQKPPHDYSQQLYDK 65

Query: 455  YRATLAESVRALVLPHLMHKRDDYLLRQLEKMWSNYCIMVKCISGFFNYLDRCFVEQRKL 634
            YR    E + + VLP L  K D+++LR+L K WSN+ +MV+ +S FF YLDR F+ +R L
Sbjct: 66   YREAFEEYINSTVLPALREKHDEFMLRELFKRWSNHKVMVRWLSRFFYYLDRYFIARRSL 125

Query: 635  PCLEDTAAXXXXXXXXXXXXXXXXXALLTLIRQERDGSNVD-------MDILMVIMRGIC 793
            P L +                    A++ L+ +ER+G  +D       +DI + I  G  
Sbjct: 126  PPLNEVGLTCFRDLVYNELHSKVKQAVIALVDKEREGEQIDRALLKNVLDIYVEIGMGQM 185

Query: 794  RSEVKSFMRNAVVQDTYAYYSRKSSEWIVQYPLQDYLAMVQDCMEKETMRLISYLHIPEG 973
                + F  + ++QDT +YYSRK+S WI +    DY+   ++C++KE  R+  YLH    
Sbjct: 186  ERYEEDF-ESFMLQDTSSYYSRKASSWIQEDSCPDYMLKSEECLKKERERVAHYLH---S 241

Query: 974  DSTELCLKVVSAPLMQMYDSYAREKQIGGQLLLQTYKTVEDDLLARCNRL 1123
             S    ++ V   L+ ++ S   EK+  G   L     V+D  L+R  RL
Sbjct: 242  SSEPKLVEKVQHELLVVFASQLLEKEHSGCRALLRDDKVDD--LSRMYRL 289

>Q3TCH7:CUL4A_MOUSE Cullin-4A - Mus musculus (Mouse)|
          Length = 759

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 7/230 (3%)
 Frame = +2

Query: 290 EDGWKVLEQGILTCSKILEGSTGTRPTVAEYMNCYD--CAYRMAVQTTSYCEEMYNGYRA 463
           +D W+ L + +    K ++ ST  R  + E     +  C+++++         +Y   R 
Sbjct: 60  QDTWRKLHEAV----KAIQSSTSIRYNLEELYQAVENLCSHKVS-------PTLYKQLRQ 108

Query: 464 TLAESVRALVLPHLMHKRDDYL-LRQLEKMWSNYCIMVKCISGFFNYLDRCFVEQRK-LP 637
              + V+A +LP      D  L L+++   W ++C  +  I   F +LDR +V Q   LP
Sbjct: 109 VCEDHVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLP 168

Query: 638 CLEDTA--AXXXXXXXXXXXXXXXXXALLTLIRQERDGSNVDMDILMVIMRGICRSEV-K 808
            + D                       +L LI +ER G  VD  +L  ++  +   +V K
Sbjct: 169 SIWDMGLELFRNHIISDRMVQSKTIDGILLLIGRERSGEAVDRSLLRSLLSMLSDLQVYK 228

Query: 809 SFMRNAVVQDTYAYYSRKSSEWIVQYPLQDYLAMVQDCMEKETMRLISYL 958
                  +++T   Y+ +    +    + +YL  V   +E+E  R+I+YL
Sbjct: 229 DSFELKFLEETNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYL 278

>Q13619:CUL4A_HUMAN Cullin-4A - Homo sapiens (Human)|
          Length = 759

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 51/230 (22%), Positives = 98/230 (42%), Gaps = 7/230 (3%)
 Frame = +2

Query: 290 EDGWKVLEQGILTCSKILEGSTGTRPTVAEYMNCYD--CAYRMAVQTTSYCEEMYNGYRA 463
           +D W+ L + +    + ++ ST  R  + E     +  C+++++         +Y   R 
Sbjct: 60  QDTWRKLHEAV----RAVQSSTSIRYNLEELYQAVENLCSHKVSPM-------LYKQLRQ 108

Query: 464 TLAESVRALVLPHLMHKRDDYL-LRQLEKMWSNYCIMVKCISGFFNYLDRCFVEQRK-LP 637
              + V+A +LP      D  L L+++   W ++C  +  I   F +LDR +V Q   LP
Sbjct: 109 ACEDHVQAQILPFREDSLDSVLFLKKINTCWQDHCRQMIMIRSIFLFLDRTYVLQNSTLP 168

Query: 638 CLEDTA--AXXXXXXXXXXXXXXXXXALLTLIRQERDGSNVDMDILMVIMRGICRSEV-K 808
            + D                       +L LI +ER G  VD  +L  ++  +   +V K
Sbjct: 169 SIWDMGLELFRTHIISDKMVQSKTIDGILLLIERERSGEAVDRSLLRSLLGMLSDLQVYK 228

Query: 809 SFMRNAVVQDTYAYYSRKSSEWIVQYPLQDYLAMVQDCMEKETMRLISYL 958
                  +++T   Y+ +    + +  + +YL  V   +E+E  R+I+YL
Sbjct: 229 DSFELKFLEETNCLYAAEGQRLMQEREVPEYLNHVSKRLEEEGDRVITYL 278

>Q13620:CUL4B_HUMAN Cullin-4B - Homo sapiens (Human)|
          Length = 895

 Score = 56.2 bits (134), Expect = 4e-07
 Identities = 46/230 (20%), Positives = 101/230 (43%), Gaps = 7/230 (3%)
 Frame = +2

Query: 290 EDGWKVLEQGILTCSKILEGSTGTRPTVAEYMNCYD--CAYRMAVQTTSYCEEMYNGYRA 463
           ++ W+ L++ +    + ++ ST  +  + E     +  C+Y+++         +Y   R 
Sbjct: 196 DETWQKLKEAV----EAIQNSTSIKYNLEELYQAVENLCSYKISAN-------LYKQLRQ 244

Query: 464 TLAESVRALVLPHLMHKRDDYL-LRQLEKMWSNYCIMVKCISGFFNYLDRCFVEQRK-LP 637
              + ++A +        D  L L+++++ W N+C  +  I   F +LDR +V Q   LP
Sbjct: 245 ICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQNSMLP 304

Query: 638 CLEDTA--AXXXXXXXXXXXXXXXXXALLTLIRQERDGSNVDMDILMVIMRGICRSEV-K 808
            + D                       +L LI +ER+G  +D  +L  ++  +   ++ +
Sbjct: 305 SIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQ 364

Query: 809 SFMRNAVVQDTYAYYSRKSSEWIVQYPLQDYLAMVQDCMEKETMRLISYL 958
                  +++T   Y+ +  + + +  + +YL  V   +E+E  RLI+YL
Sbjct: 365 DSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEADRLITYL 414

>Q5R4G6:CUL1_PONPY Cullin-1 - Pongo pygmaeus (Orangutan)|
          Length = 776

 Score = 45.8 bits (107), Expect = 5e-04
 Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 21/181 (11%)
 Frame = +2

Query: 518 DDYLLRQLEKMWSNYCIMVKCISGFFNYLDRCFV-----EQRK-LPCLEDTAAXXXXXXX 679
           D+ +L+   + W +Y    K ++G   YL+R +V     E RK +  +   A        
Sbjct: 112 DESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCL 171

Query: 680 XXXXXXXXXXALLTLIRQERDGSNVDMDILMVIM---------------RGICRSEVKSF 814
                     A+L LI +ER+G  ++  ++  ++               +G   +  K  
Sbjct: 172 FRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKES 231

Query: 815 MRNAVVQDTYAYYSRKSSEWIVQYPLQDYLAMVQDCMEKETMRLISYLHIPEGDSTELCL 994
             +  + DT  +Y+R+S+E++ Q P+ +Y+   +  + +E  R+  YLH  E    EL  
Sbjct: 232 FESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLH--ESTQDELAR 289

Query: 995 K 997
           K
Sbjct: 290 K 290

>Q9WTX6:CUL1_MOUSE Cullin-1 - Mus musculus (Mouse)|
          Length = 776

 Score = 45.8 bits (107), Expect = 5e-04
 Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 21/181 (11%)
 Frame = +2

Query: 518 DDYLLRQLEKMWSNYCIMVKCISGFFNYLDRCFV-----EQRK-LPCLEDTAAXXXXXXX 679
           D+ +L+   + W +Y    K ++G   YL+R +V     E RK +  +   A        
Sbjct: 112 DESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCL 171

Query: 680 XXXXXXXXXXALLTLIRQERDGSNVDMDILMVIM---------------RGICRSEVKSF 814
                     A+L LI +ER+G  ++  ++  ++               +G   +  K  
Sbjct: 172 FRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKES 231

Query: 815 MRNAVVQDTYAYYSRKSSEWIVQYPLQDYLAMVQDCMEKETMRLISYLHIPEGDSTELCL 994
             +  + DT  +Y+R+S+E++ Q P+ +Y+   +  + +E  R+  YLH  E    EL  
Sbjct: 232 FESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLH--ESTQDELAR 289

Query: 995 K 997
           K
Sbjct: 290 K 290

>Q13616:CUL1_HUMAN Cullin-1 - Homo sapiens (Human)|
          Length = 776

 Score = 45.8 bits (107), Expect = 5e-04
 Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 21/181 (11%)
 Frame = +2

Query: 518 DDYLLRQLEKMWSNYCIMVKCISGFFNYLDRCFV-----EQRK-LPCLEDTAAXXXXXXX 679
           D+ +L+   + W +Y    K ++G   YL+R +V     E RK +  +   A        
Sbjct: 112 DESVLKFYTQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRDCL 171

Query: 680 XXXXXXXXXXALLTLIRQERDGSNVDMDILMVIM---------------RGICRSEVKSF 814
                     A+L LI +ER+G  ++  ++  ++               +G   +  K  
Sbjct: 172 FRPLNKQVTNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFAKGPTLTVYKES 231

Query: 815 MRNAVVQDTYAYYSRKSSEWIVQYPLQDYLAMVQDCMEKETMRLISYLHIPEGDSTELCL 994
             +  + DT  +Y+R+S+E++ Q P+ +Y+   +  + +E  R+  YLH  E    EL  
Sbjct: 232 FESQFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLH--ESTQDELAR 289

Query: 995 K 997
           K
Sbjct: 290 K 290

>Q24311:CUL1_DROME Cullin homolog 1 - Drosophila melanogaster (Fruit fly)|
          Length = 774

 Score = 45.8 bits (107), Expect = 5e-04
 Identities = 53/276 (19%), Positives = 103/276 (37%), Gaps = 44/276 (15%)
 Frame = +2

Query: 281 LSFEDGWKVLEQGILTCSKILEGSTGTRPTVAEYMNCYDCAYRMAVQTTS---------- 430
           ++ +D W  L +GI+   ++ E       T ++YM  Y   Y      ++          
Sbjct: 14  VNLDDIWSELVEGIM---QVFEHEKSL--TRSQYMRFYTHVYDYCTSVSAAPSGRSSGKT 68

Query: 431 -----YCEEMYNGYRATLAESVRALVLPHLMHKRDDYLLRQLEKMWSNYCIMVKCISGFF 595
                  +++Y+     L   +  L+        ++ LL +  K W +Y      + G  
Sbjct: 69  GGAQLVGKKLYDRLEQFLKSYLSELLTKFKAISGEEVLLSRYTKQWKSYQFSSTVLDGIC 128

Query: 596 NYLDRCFVE------QRKLPCLEDTAAXXXXXXXXXXXXXXXXXALLTLIRQERDGSNVD 757
           NYL+R +V+      Q+ +  +   A                  A+L  I +ER G  ++
Sbjct: 129 NYLNRNWVKRECEEGQKGIYKIYRLALVAWKGHLFQVLNEPVTKAVLKSIEEERQGKLIN 188

Query: 758 MDILMVIMRGICR---------------SEVKSFMRNAVVQDTYAYYSRKSSEWIVQYPL 892
             ++  ++                    S  K    N  + DT A+Y ++S  ++    +
Sbjct: 189 RSLVRDVIECYVELSFNEEDTDAEQQKLSVYKQNFENKFIADTSAFYEKESDAFLSTNTV 248

Query: 893 QDYLAMVQDCMEKETMRL--------ISYLHIPEGD 976
            +YL  V++ +E+ET R+        +SYLH    D
Sbjct: 249 TEYLKHVENRLEEETQRVRGFNSKNGLSYLHETTAD 284

>Q17391:CUL3_CAEEL Cullin-3 - Caenorhabditis elegans|
          Length = 777

 Score = 42.7 bits (99), Expect = 0.004
 Identities = 53/253 (20%), Positives = 96/253 (37%), Gaps = 18/253 (7%)
 Frame = +2

Query: 392  YDCAYRMAVQTTSYCEEMYNGYRATLAESVRALVLPHLMHKRDDYLLRQLEKMWSNYCIM 571
            Y  AY M +    + E +YNG +  + + + ++ +  +        L  + + W+++ + 
Sbjct: 55   YRNAYTMVLH--KHGERLYNGLKDVIQDHMASVRIRIIESMNSGSFLETVAESWADHTVA 112

Query: 572  VKCISGFFNYLDRCFVEQRK--LPCLE-DTAAXXXXXXXXXXXXXXXXXALLTLIRQERD 742
            +  I     Y+DR +V Q    LP       A                 ALL LI+ +R 
Sbjct: 113  MVMIRDILMYMDRIYVAQNNHVLPVYNLGLDAYRTEILRQNGIGDRIRDALLELIKLDRK 172

Query: 743  GSNVDMDIL-----MVIMRGI-CRSEVKSFMRNAVVQDTYAYYSRKSSEWIV-QYPLQDY 901
             + ++   +     M+I  GI  R+  +      ++++T  YY      W+        Y
Sbjct: 173  SNQINWHGIKNACDMLISLGIDSRTVYEDEFERPLLKETSDYYRDVCKNWLSGDNDACFY 232

Query: 902  LAMVQDCMEKETMRLISYLHIPEGDSTELCLKVVSAPLMQMYDSYAREKQI--------G 1057
            LA V+  M  E  R   YL            K+  A ++Q+ D     + I        G
Sbjct: 233  LAQVEIAMHDEASRASRYLD-----------KMTEAKILQVMDDVMVAEHIQTIVYMQNG 281

Query: 1058 GQLLLQTYKTVED 1096
            G   +  +K +ED
Sbjct: 282  GVKFMLEHKKIED 294

>Q9JLV5:CUL3_MOUSE Cullin-3 - Mus musculus (Mouse)|
          Length = 768

 Score = 42.0 bits (97), Expect = 0.007
 Identities = 47/241 (19%), Positives = 103/241 (42%), Gaps = 9/241 (3%)
 Frame = +2

Query: 392  YDCAYRMAVQTTSYCEEMYNGYRATLAESVRALVLPHLMHKRDDYLLRQLEKMWSNYCIM 571
            Y  AY M +    + E++Y G R  + E +   V   +++  ++  L+ L + W+++   
Sbjct: 58   YRNAYTMVLH--KHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTA 115

Query: 572  VKCISGFFNYLDRCFVEQRKLPCLEDTA--AXXXXXXXXXXXXXXXXXALLTLIRQERDG 745
            +  I     Y+DR +V+Q  +  + +                       LL +I +ER G
Sbjct: 116  MVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKG 175

Query: 746  SNVDMDIL-----MVIMRGI-CRSEVKSFMRNAVVQDTYAYYSRKSSEWIVQYPLQDYLA 907
              VD   +     M+++ G+  RS  +       ++ +  ++  +S +++ +     Y+ 
Sbjct: 176  EVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIK 235

Query: 908  MVQDCMEKETMRLISYLHIPEGDSTELCLKVVSAPLMQMYDSYAREKQIGGQL-LLQTYK 1084
             V+  + +E  R+   +H  +  + E  +KVV   L+  +     E +  G + +L+  K
Sbjct: 236  KVEARINEEIERV---MHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGK 292

Query: 1085 T 1087
            T
Sbjct: 293  T 293

>Q13618:CUL3_HUMAN Cullin-3 - Homo sapiens (Human)|
          Length = 768

 Score = 42.0 bits (97), Expect = 0.007
 Identities = 47/241 (19%), Positives = 103/241 (42%), Gaps = 9/241 (3%)
 Frame = +2

Query: 392  YDCAYRMAVQTTSYCEEMYNGYRATLAESVRALVLPHLMHKRDDYLLRQLEKMWSNYCIM 571
            Y  AY M +    + E++Y G R  + E +   V   +++  ++  L+ L + W+++   
Sbjct: 58   YRNAYTMVLH--KHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTA 115

Query: 572  VKCISGFFNYLDRCFVEQRKLPCLEDTA--AXXXXXXXXXXXXXXXXXALLTLIRQERDG 745
            +  I     Y+DR +V+Q  +  + +                       LL +I +ER G
Sbjct: 116  MVMIRDILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKG 175

Query: 746  SNVDMDIL-----MVIMRGI-CRSEVKSFMRNAVVQDTYAYYSRKSSEWIVQYPLQDYLA 907
              VD   +     M+++ G+  RS  +       ++ +  ++  +S +++ +     Y+ 
Sbjct: 176  EVVDRGAIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIK 235

Query: 908  MVQDCMEKETMRLISYLHIPEGDSTELCLKVVSAPLMQMYDSYAREKQIGGQL-LLQTYK 1084
             V+  + +E  R+   +H  +  + E  +KVV   L+  +     E +  G + +L+  K
Sbjct: 236  KVEARINEEIERV---MHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGK 292

Query: 1085 T 1087
            T
Sbjct: 293  T 293

>O13790:CUL1_SCHPO Cullin-1 - Schizosaccharomyces pombe (Fission yeast)|
          Length = 767

 Score = 38.9 bits (89), Expect = 0.063
 Identities = 56/257 (21%), Positives = 99/257 (38%), Gaps = 31/257 (12%)
 Frame = +2

Query: 284 SFEDGWKVLEQGILTCSKIL-EGSTGTRPT---VAEYMNCYDCAYRMAV-----QTTSYC 436
           S    W  L+ G+    + L EG T T+      A +  C D +  + V     QT +  
Sbjct: 19  SLNGTWDFLKTGVSQIFERLDEGMTITKYMELYTAIHNYCADASKTITVDNFNDQTANVL 78

Query: 437 -EEMYNGYRATLAESVRALVLPHLMHKRDDYLLRQLEKMWSNYCIMVKCISGFFNYLDRC 613
            E +YN     L E +  L    +     +  L    K W+ +    + I+  F YL+R 
Sbjct: 79  GEALYNNLVLYLEEYLARLRKECISQTNHEEQLAAYAKYWTRFTTSARFINHLFGYLNRY 138

Query: 614 FVEQRK------LPCLEDTAAXXXXXXXXXXXXXXXXXALLTLIRQERDGSNVDMDILMV 775
           +V+ +       +  +                       LL +  ++R     DM  + V
Sbjct: 139 WVKLKNRFTETLVYDIYTLCLVSWHHHVFSHIRDSLLQNLLYMFTKKRLYEPTDMKYVEV 198

Query: 776 IMRGICR-------------SEVKSFMRNAVVQDTYAYYSRKSSEWIVQYPLQDYL--AM 910
            +  I               S  K+F     +++T  +Y+++SSE++  + + DYL  A 
Sbjct: 199 CVDSITSLSFDKTDMTKPNLSSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKKAE 258

Query: 911 VQDCMEKETMRLISYLH 961
           ++   E+E +RL  YLH
Sbjct: 259 IRLAEEEELVRL--YLH 273

>Q17390:CUL2_CAEEL Cullin-2 - Caenorhabditis elegans|
          Length = 776

 Score = 38.5 bits (88), Expect = 0.083
 Identities = 51/236 (21%), Positives = 84/236 (35%), Gaps = 43/236 (18%)
 Frame = +2

Query: 425  TSYCEEMYNGYRATLAESVRALVLPHLMHKRDDYLLRQLEKMWSNYCIMVKCISGFFNYL 604
            T   E +YN  +A + E VR      ++    D LL++  KMW  +      I   F YL
Sbjct: 52   TPLSERLYNEVKACIQEHVRQK-RQDIVDVDPDLLLQEYHKMWRVFHEGAIFIHRLFGYL 110

Query: 605  DRCFVEQRKLPCLED------------------TAAXXXXXXXXXXXXXXXXXALLTLIR 730
            ++ FV+Q++   L++                   A                   LL  I 
Sbjct: 111  NKQFVKQKRCTDLDNFAQYAAFLQIPDVKEIGCLALEIWKEDLVKTILPQLVKLLLIAID 170

Query: 731  QERDGS-------------------NVDMDILMVI-MRGICRSEVKSFMRNA----VVQD 838
             +R G+                     D D++     R   R    +F + +    ++ D
Sbjct: 171  NDRKGNFPHIANEVSGVINSFVKMEETDFDVVPAEGARYKARESTTAFYQESFEKPLLTD 230

Query: 839  TYAYYSRKSSEWIVQYPLQDYLAMVQDCMEKETMRLISYLHIPEGDST-ELCLKVV 1003
            T  YYS  + + +      +Y+  V   +E+E MR   YLH    +    LC KV+
Sbjct: 231  TEQYYSALAQKMLTDLSCSEYMEQVIVLLEQEEMRAKKYLHESSVEKVITLCQKVM 286

>Q17389:CUL1_CAEEL Cullin-1 - Caenorhabditis elegans|
          Length = 780

 Score = 34.7 bits (78), Expect = 1.2
 Identities = 51/267 (19%), Positives = 100/267 (37%), Gaps = 46/267 (17%)
 Frame = +2

Query: 299 WKVLEQGILTCSKILEGSTGTRPTVAEYMNCYDCAYRMAVQTTSYCEEMYNGYRATLAES 478
           WK L+ G+    +    +   +  +  Y + YD    + + T+    E      +T A +
Sbjct: 17  WKKLQDGLDVAYR--RENMAPKDYMTLYTSVYDYCTSITLSTSRRDGEDGRAESSTPART 74

Query: 479 VRALVLPHLMHKR-DDY-------------------LLRQLEKMWSNYCIMVKCISGFFN 598
             A  + H M++R ++Y                   LL+     W N+ I  K + G F 
Sbjct: 75  AGADFVGHEMYQRVEEYVKAYVIAVCEKGAELSGEDLLKYYTTEWENFRISSKVMDGIFA 134

Query: 599 YLDRCFVEQ------RKLPCLEDTAAXXXXXXXXXXXXXXXXXALLTLIRQERDGSNVDM 760
           YL+R ++ +        +  +   A                  A+L LIR ER GS ++ 
Sbjct: 135 YLNRHWIRRELDEGHENIYMVYTLALVVWKRNLFNDLKDKVIDAMLELIRSERTGSMINS 194

Query: 761 DILMVIMR-----GICRSEV--------------KSFMRNAVVQDTYAYYSRKSSEWIVQ 883
             +  ++      G+  SE               K F     ++ T  +Y+++++ ++  
Sbjct: 195 RYISGVVECLVELGVDDSETDAKKDAETKKLAVYKEFFEVKFLEATRGFYTQEAANFLSN 254

Query: 884 -YPLQDYLAMVQDCMEKETMRLISYLH 961
              + DY+  V+  + +E  R   YL+
Sbjct: 255 GGNVTDYMIKVETRLNQEDDRCQLYLN 281

>P53776:LHX4_MOUSE LIM/homeobox protein Lhx4 - Mus musculus (Mouse)|
          Length = 367

 Score = 32.3 bits (72), Expect = 5.9
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 509 HKRDDYLLRQLEKMWSNYCIMVKCISGFFNYLDRCFVEQRKLPCLED 649
           H  D ++L+ L++ W + C+  KC        DRCF     + C ED
Sbjct: 13  HILDKFILKVLDRHWHSSCL--KCADCQMQLADRCFSRAGSVYCKED 57

>Q969G2:LHX4_HUMAN LIM/homeobox protein Lhx4 - Homo sapiens (Human)|
          Length = 367

 Score = 32.3 bits (72), Expect = 5.9
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 509 HKRDDYLLRQLEKMWSNYCIMVKCISGFFNYLDRCFVEQRKLPCLED 649
           H  D ++L+ L++ W + C+  KC        DRCF     + C ED
Sbjct: 13  HILDKFILKVLDRHWHSSCL--KCADCQMQLADRCFSRAGSVYCKED 57

>Q94JU3:CSN7_ARATH COP9 signalosome complex subunit 7 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 260

 Score = 32.3 bits (72), Expect = 5.9
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +2

Query: 464 TLAESVRALVLPHLMHKRDDYLLRQLEKMWSNYCIMVKCISGFFNYLDRCF 616
           TLAES + L    LM + D   +R+LE    N C+    + G  + L RCF
Sbjct: 102 TLAESNKVLPYDTLMVELDVSNVRELEDFLINECMYAGIVRGKLDQLKRCF 152


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 293,951,559
Number of extensions: 6572649
Number of successful extensions: 15311
Number of sequences better than 10.0: 17
Number of HSP's gapped: 15294
Number of HSP's successfully gapped: 18
Length of query: 544
Length of database: 100,686,439
Length adjustment: 118
Effective length of query: 426
Effective length of database: 68,319,629
Effective search space: 29104161954
Effective search space used: 29104161954
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)