ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf55h05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q0WW21:UGAGT_ARATH Anthocyanin 5-O-glucosyltransferase - Arabido... 35 1.6
2Q50634:SECD_MYCTU Protein-export membrane protein secD - Mycobac... 33 4.6

>Q0WW21:UGAGT_ARATH Anthocyanin 5-O-glucosyltransferase - Arabidopsis thaliana (Mouse-ear|
            cress)
          Length = 456
 Score = 34.7 bits (78), Expect = 1.6
 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
 Frame = +3

Query: 1125 VVPWIGGRIILMTHLPTDSQWLHSRIEINGYEEYSGTEYRSAGCTEEYKVVRRYLEQSGE 1304
            +VPW+   +    HLPT   W+     ++ Y  Y  T Y+     E  K+ +  L  +G+
Sbjct: 122  LVPWVS-TVAREFHLPTTLLWIEPATVLDIYYYYFNTSYKHLFDVEPIKLPKLPLITTGD 180

Query: 1305 EESICLEGD-IGGGLI-LQRHISIL--QDNPKVQINS 1403
              S       +   L+ L+ HI  L  + NPK+ +N+
Sbjct: 181  LPSFLQPSKALPSALVTLREHIEALETESNPKILVNT 217



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>Q50634:SECD_MYCTU Protein-export membrane protein secD - Mycobacterium tuberculosis|
          Length = 573

 Score = 33.1 bits (74), Expect = 4.6
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +3

Query: 927  VDGEDLHITMPS--GSEVSNLVATSELELKKRLEMISPIPDIDEPSGQEGAE 1076
            VDG++L IT+P   GSE  NL  T+ L ++  L  +   P  +EP     AE
Sbjct: 90   VDGDNLVITVPGNDGSEARNLGQTARLYIRPVLNSMPAQPAAEEPQPAPSAE 141


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 379,329,118
Number of extensions: 8637993
Number of successful extensions: 21814
Number of sequences better than 10.0: 2
Number of HSP's gapped: 21803
Number of HSP's successfully gapped: 2
Length of query: 688
Length of database: 100,686,439
Length adjustment: 120
Effective length of query: 568
Effective length of database: 67,771,039
Effective search space: 38493950152
Effective search space used: 38493950152
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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