ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf55h05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK243062.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100014O03, full insert sequence Length = 3484 Score = 1035 bits (522), Expect = 0.0 Identities = 934/1070 (87%), Gaps = 6/1070 (0%) Strand = Plus / Plus Query: 718 gtaaagctgaaggtgttctattcgaagatgctggggatggatacgggttcacacagggga 777 ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| Sbjct: 2024 gtaaagctgaaggtgttctcttcgaagatgctgaggatggatatgggttcacacagggga 2083 Query: 778 actatcttttgacatattatgttgcccaagtccactcatcagtggtttctgtgaaagttc 837 ||||||| ||||||||||||||||| | ||||||| ||||||||||||||||| || Sbjct: 2084 actatctgttgacatattatgttgctgagctccactcgtcagtggtttctgtgaaggtct 2143 Query: 838 tgaaaactgaaggctcatggaacaggccaaaacgtaacttaaacataagtatattacttg 897 ||||||||||||| || |||| || || ||||| ||||||||||||||||||||||||| Sbjct: 2144 tgaaaactgaaggatcttggaggagacctaaacggaacttaaacataagtatattacttg 2203 Query: 898 gtggaggtgctatgataaattcgcatggtgtcgatggcgaagatttacatattacgatgc 957 |||||||||||||||||| ||||| |||| | ||||| ||||| ||||| | || |||| Sbjct: 2204 gtggaggtgctatgataagttcgcgtggtattgatggtgaagaagtacatctgacaatgc 2263 Query: 958 cttctgggtctgaagtgtccaacttagtcgcaacaagtgaactcgagctcaagaaacgtt 1017 |||||| |||||||| |||| ||| || || ||||||||||| |||| |||||||||| Sbjct: 2264 cttctgattctgaagtatccagcttggttgcgacaagtgaacttgagcaaaagaaacgtt 2323 Query: 1018 tggagatgatttcgcctataccagatatagatgaaccgtcaggacaggaaggtgctgaac 1077 ||||||||||| ||||||||| ||||| ||||| || | ||||| ||||| ||||| | Sbjct: 2324 tggagatgattaagcctatacctgatatggatgagccagctggacaagaaggggctgagc 2383 Query: 1078 tctcaaaaatacctattgatttgaagagcggggactggttgcttaaggttgtaccttgga 1137 | ||||||| |||| ||||||||||||| ||||||||| |||||||||||||||| |||| Sbjct: 2384 tttcaaaaacacctgttgatttgaagagtggggactggatgcttaaggttgtaccatgga 2443 Query: 1138 ttggtggtcgtattattttgatgacacatcttcctactgattcccagtggcttcatagca 1197 |||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||| Sbjct: 2444 ttggtggtcgtattatctcgatgacacatctcccttctgattcccagtggcttcatagca 2503 Query: 1198 ggattgaaataaatggttatgaagaatacagtgggactgaatataggtctgctgggtgca 1257 |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2504 ggattgaaatcaatggttatgaagaatacagtgggactgaatataggtccgctggatgca 2563 Query: 1258 cagaagagtacaaagtcgttaggaggtatcttgagcaatcaggagaggaggaatctattt 1317 | ||||| ||||| ||| | ||||||||||||||||||||||| |||||||||||| ||| Sbjct: 2564 ctgaagaatacaatgtcatgaggaggtatcttgagcaatcaggggaggaggaatctgttt 2623 Query: 1318 gtttggaaggtgatattgggggtggtcttattcttcagcgccacatatccattttgcaag 1377 |||||||||| |||||||| ||||| || |||| ||||| ||||||||||| ||| ||| Sbjct: 2624 gtttggaaggagatattggtggtggcctagttctccagcgtcacatatccatcttgaaag 2683 Query: 1378 acaacccaaaggtt---cagattaactctagcattgaagcaagaagtgttggagctggct 1434 | ||||| ||| || |||||| |||| |||||| ||||||||| |||||||||||| | Sbjct: 2684 ataacccgaagattttccagattgactcaagcattcaagcaagaaatgttggagctggtt 2743 Query: 1435 ctggtgggttttcaaggttggtttgtttgcgagttcatcccactttcactcttctccacc 1494 |||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||| Sbjct: 2744 ctggtgggttttcaaggttggtatgtttgcgagttcatccaactttcacacttctacacc 2803 Query: 1495 caactgaggtggttgttgcgtttacagccatcaatggctcaaagcaagagttctctccag 1554 |||| || |||||||| || ||||| || |||||||| |||||||||||| |||| |||| Sbjct: 2804 caacagaagtggttgtggcttttacggctatcaatggttcaaagcaagagatctccccag 2863 Query: 1555 aatccagagaagtgacattagagggagaccttcggccaaatggggaatggatgctggtgg 1614 |||| ||| ||| ||||||||||||| | |||| | ||||| |||||||| |||| Sbjct: 2864 aatctggagtagt---attagagggagacatgaggcccgacggggagtggatgctagtgg 2920 Query: 1615 acaaatgcgcaggggtgagcctggtcaatagttttgatcccagtcaggttagcaaatgct 1674 |||| |||| ||| |||| |||| ||| |||||||||||||||||||||||||||| | Sbjct: 2921 acaactgcgtaggactgagtttggtaaatcgttttgatcccagtcaggttagcaaatgtt 2980 Query: 1675 tggtgcactggggaacaggtaatttgaacatggagctttggtcagaggaaaggccagttt 1734 |||||||||||||||| ||| || ||||||||||||||||||| |||||||| ||||||| Sbjct: 2981 tggtgcactggggaaccggtgatgtgaacatggagctttggtcggaggaaagaccagttt 3040 Query: 1735 ccaaggacacaccgttgaggatttgccaccagtacgagctgagacaaaca 1784 ||||||| || |||||||| || ||||||||||||||| ||||||||||| Sbjct: 3041 ccaaggagactccgttgagaatatgccaccagtacgaggtgagacaaaca 3090
>ref|NM_001066015.1| Oryza sativa (japonica cultivar-group) Os07g0420700 (Os07g0420700) mRNA, complete cds Length = 3243 Score = 745 bits (376), Expect = 0.0 Identities = 671/768 (87%), Gaps = 6/768 (0%) Strand = Plus / Plus Query: 1020 gagatgatttcgcctataccagatatagatgaaccgtcaggacaggaaggtgctgaactc 1079 ||||||||| ||||||||| ||||| ||||| || | ||||| ||||| ||||| || Sbjct: 2473 gagatgattaagcctatacctgatatggatgagccagctggacaagaaggggctgagctt 2532 Query: 1080 tcaaaaatacctattgatttgaagagcggggactggttgcttaaggttgtaccttggatt 1139 ||||||| |||| ||||||||||||| ||||||||| |||||||||||||||| |||||| Sbjct: 2533 tcaaaaacacctgttgatttgaagagtggggactggatgcttaaggttgtaccatggatt 2592 Query: 1140 ggtggtcgtattattttgatgacacatcttcctactgattcccagtggcttcatagcagg 1199 |||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 2593 ggtggtcgtattatctcgatgacacatctcccttctgattcccagtggcttcatagcagg 2652 Query: 1200 attgaaataaatggttatgaagaatacagtgggactgaatataggtctgctgggtgcaca 1259 |||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 2653 attgaaatcaatggttatgaagaatacagtgggactgaatataggtccgctggatgcact 2712 Query: 1260 gaagagtacaaagtcgttaggaggtatcttgagcaatcaggagaggaggaatctatttgt 1319 ||||| ||||| ||| | ||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 2713 gaagaatacaatgtcatgaggaggtatcttgagcaatcaggggaggaggaatctgtttgt 2772 Query: 1320 ttggaaggtgatattgggggtggtcttattcttcagcgccacatatccattttgcaagac 1379 |||||||| |||||||| ||||| || |||| ||||| ||||||||||| ||| |||| Sbjct: 2773 ttggaaggagatattggtggtggcctagttctccagcgtcacatatccatcttgaaagat 2832 Query: 1380 aacccaaaggtt---cagattaactctagcattgaagcaagaagtgttggagctggctct 1436 ||||| ||| || |||||| |||| |||||| ||||||||| |||||||||||| ||| Sbjct: 2833 aacccgaagattttccagattgactcaagcattcaagcaagaaatgttggagctggttct 2892 Query: 1437 ggtgggttttcaaggttggtttgtttgcgagttcatcccactttcactcttctccaccca 1496 |||||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||| Sbjct: 2893 ggtgggttttcaaggttggtatgtttgcgagttcatccaactttcacacttctacaccca 2952 Query: 1497 actgaggtggttgttgcgtttacagccatcaatggctcaaagcaagagttctctccagaa 1556 || || |||||||| || ||||| || |||||||| |||||||||||| |||| |||||| Sbjct: 2953 acagaagtggttgtggcttttacggctatcaatggttcaaagcaagagatctccccagaa 3012 Query: 1557 tccagagaagtgacattagagggagaccttcggccaaatggggaatggatgctggtggac 1616 || ||| ||| ||||||||||||| | |||| | ||||| |||||||| |||||| Sbjct: 3013 tctggagtagt---attagagggagacatgaggcccgacggggagtggatgctagtggac 3069 Query: 1617 aaatgcgcaggggtgagcctggtcaatagttttgatcccagtcaggttagcaaatgcttg 1676 || |||| ||| |||| |||| ||| |||||||||||||||||||||||||||| ||| Sbjct: 3070 aactgcgtaggactgagtttggtaaatcgttttgatcccagtcaggttagcaaatgtttg 3129 Query: 1677 gtgcactggggaacaggtaatttgaacatggagctttggtcagaggaaaggccagtttcc 1736 |||||||||||||| ||| || ||||||||||||||||||| |||||||| ||||||||| Sbjct: 3130 gtgcactggggaaccggtgatgtgaacatggagctttggtcggaggaaagaccagtttcc 3189 Query: 1737 aaggacacaccgttgaggatttgccaccagtacgagctgagacaaaca 1784 ||||| || |||||||| || ||||||||||||||| ||||||||||| Sbjct: 3190 aaggagactccgttgagaatatgccaccagtacgaggtgagacaaaca 3237 Score = 234 bits (118), Expect = 1e-57 Identities = 175/194 (90%) Strand = Plus / Plus Query: 718 gtaaagctgaaggtgttctattcgaagatgctggggatggatacgggttcacacagggga 777 ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| Sbjct: 2120 gtaaagctgaaggtgttctcttcgaagatgctgaggatggatatgggttcacacagggga 2179 Query: 778 actatcttttgacatattatgttgcccaagtccactcatcagtggtttctgtgaaagttc 837 ||||||| ||||||||||||||||| | ||||||| ||||||||||||||||| || Sbjct: 2180 actatctgttgacatattatgttgctgagctccactcgtcagtggtttctgtgaaggtct 2239 Query: 838 tgaaaactgaaggctcatggaacaggccaaaacgtaacttaaacataagtatattacttg 897 ||||||||||||| || |||| || || ||||| ||||||||||||||||||||||||| Sbjct: 2240 tgaaaactgaaggatcttggaggagacctaaacggaacttaaacataagtatattacttg 2299 Query: 898 gtggaggtgctatg 911 |||||||||||||| Sbjct: 2300 gtggaggtgctatg 2313
>dbj|AK103620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133M03, full insert sequence Length = 4430 Score = 573 bits (289), Expect = e-160 Identities = 487/553 (88%) Strand = Plus / Plus Query: 718 gtaaagctgaaggtgttctattcgaagatgctggggatggatacgggttcacacagggga 777 ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| Sbjct: 2820 gtaaagctgaaggtgttctcttcgaagatgctgaggatggatatgggttcacacagggga 2879 Query: 778 actatcttttgacatattatgttgcccaagtccactcatcagtggtttctgtgaaagttc 837 ||||||| ||||||||||||||||| | ||||||| ||||||||||||||||| || Sbjct: 2880 actatctgttgacatattatgttgctgagctccactcgtcagtggtttctgtgaaggtct 2939 Query: 838 tgaaaactgaaggctcatggaacaggccaaaacgtaacttaaacataagtatattacttg 897 ||||||||||||| || |||| || || ||||| ||||||||||||||||||||||||| Sbjct: 2940 tgaaaactgaaggatcttggaggagacctaaacggaacttaaacataagtatattacttg 2999 Query: 898 gtggaggtgctatgataaattcgcatggtgtcgatggcgaagatttacatattacgatgc 957 |||||||||||||||||| ||||| |||| | ||||| ||||| ||||| | || |||| Sbjct: 3000 gtggaggtgctatgataagttcgcgtggtattgatggtgaagaagtacatctgacaatgc 3059 Query: 958 cttctgggtctgaagtgtccaacttagtcgcaacaagtgaactcgagctcaagaaacgtt 1017 |||||| |||||||| |||| ||| || || ||||||||||| |||| |||||||||| Sbjct: 3060 cttctgattctgaagtatccagcttggttgcgacaagtgaacttgagcaaaagaaacgtt 3119 Query: 1018 tggagatgatttcgcctataccagatatagatgaaccgtcaggacaggaaggtgctgaac 1077 ||||||||||| ||||||||| ||||| ||||| || | ||||| ||||| ||||| | Sbjct: 3120 tggagatgattaagcctatacctgatatggatgagccagctggacaagaaggggctgagc 3179 Query: 1078 tctcaaaaatacctattgatttgaagagcggggactggttgcttaaggttgtaccttgga 1137 | ||||||| |||| ||||||||||||| ||||||||| |||||||||||||||| |||| Sbjct: 3180 tttcaaaaacacctgttgatttgaagagtggggactggatgcttaaggttgtaccatgga 3239 Query: 1138 ttggtggtcgtattattttgatgacacatcttcctactgattcccagtggcttcatagca 1197 |||||||||||||||| | |||||||||||| ||| |||||||||||||||||||||||| Sbjct: 3240 ttggtggtcgtattatctcgatgacacatctcccttctgattcccagtggcttcatagca 3299 Query: 1198 ggattgaaataaatggttatgaagaatacagtgggactgaatataggtctgctgggtgca 1257 |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 3300 ggattgaaatcgatggttatgaagaatacagtgggactgaatataggtccgctggatgca 3359 Query: 1258 cagaagagtacaa 1270 | ||||| ||||| Sbjct: 3360 ctgaagaatacaa 3372 Score = 464 bits (234), Expect = e-127 Identities = 442/510 (86%), Gaps = 6/510 (1%) Strand = Plus / Plus Query: 1278 aggaggtatcttgagcaatcaggagaggaggaatctatttgtttggaaggtgatattggg 1337 ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 3530 aggaggtatcttgagcaatcaggggaggaggaatctgtttgtttggaaggagatattggt 3589 Query: 1338 ggtggtcttattcttcagcgccacatatccattttgcaagacaacccaaaggtt---cag 1394 ||||| || |||| ||||| ||||||||||| ||| |||| ||||| ||| || ||| Sbjct: 3590 ggtggcctagttctccagcgtcacatatccatcttgaaagataacccgaagattttccag 3649 Query: 1395 attaactctagcattgaagcaagaagtgttggagctggctctggtgggttttcaaggttg 1454 ||| |||| |||||| ||||||||| |||||||||||| ||||||||||||||||||||| Sbjct: 3650 attgactcaagcattcaagcaagaaatgttggagctggttctggtgggttttcaaggttg 3709 Query: 1455 gtttgtttgcgagttcatcccactttcactcttctccacccaactgaggtggttgttgcg 1514 || ||||||||||||||||| |||||||| ||||| |||||||| || |||||||| || Sbjct: 3710 gtatgtttgcgagttcatccaactttcacacttctacacccaacagaagtggttgtggct 3769 Query: 1515 tttacagccatcaatggctcaaagcaagagttctctccagaatccagagaagtgacatta 1574 ||||| || |||||||| |||||||||||| |||| |||||||| ||| ||| |||| Sbjct: 3770 tttacggctatcaatggttcaaagcaagagatctccccagaatctggagtagt---atta 3826 Query: 1575 gagggagaccttcggccaaatggggaatggatgctggtggacaaatgcgcaggggtgagc 1634 ||||||||| | |||| | ||||| |||||||| |||||||| |||| ||| |||| Sbjct: 3827 gagggagacatgaggcccgacggggagtggatgctagtggacaactgcgtaggactgagt 3886 Query: 1635 ctggtcaatagttttgatcccagtcaggttagcaaatgcttggtgcactggggaacaggt 1694 |||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 3887 ttggtaaatcgttttgatcccagtcaggttagcaaatgtttggtgcactggggaaccggt 3946 Query: 1695 aatttgaacatggagctttggtcagaggaaaggccagtttccaaggacacaccgttgagg 1754 || ||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 3947 gatgtgaacatggagctttggtcggaggaaagaccagtttccaaggagactccgttgaga 4006 Query: 1755 atttgccaccagtacgagctgagacaaaca 1784 || ||||||||||||||| ||||||||||| Sbjct: 4007 atatgccaccagtacgaggtgagacaaaca 4036
>ref|NM_001066018.1| Oryza sativa (japonica cultivar-group) Os07g0421300 (Os07g0421300) mRNA, complete cds Length = 3130 Score = 369 bits (186), Expect = 3e-98 Identities = 536/652 (82%), Gaps = 3/652 (0%) Strand = Plus / Plus Query: 720 aaagctgaaggtgttctattcgaagatgctggggatggatacgggttcacacaggggaac 779 |||||||||||||| || || ||||||| |||||||||||| | |||| || ||||| Sbjct: 1930 aaagctgaaggtgtcctctttgaagatgatggggatggatatgagttccttcaagggaat 1989 Query: 780 tatcttttgacatattatgttgcccaagtccactcatcagtggtttctgtgaaagttctg 839 |||||||||||||| |||||||| || ||||||||||||||||| |||| |||||| Sbjct: 1990 tatcttttgacatactatgttgcagaactccactcatcagtggttactgttaaagttgcc 2049 Query: 840 aaaactgaaggctcatggaacaggccaaaacgtaacttaaacataagtatattacttggt 899 ||||||||| |||||||| || ||||| || |||||||| |||| |||||| ||||| Sbjct: 2050 cgaactgaaggatcatggaagagaccaaatcgcaacttaaaaataaatatattgcttgga 2109 Query: 900 ggaggtgctatgataaattcgcatggtgtcgatggcgaagatttacatattacgatgcct 959 |||||||||||| ||| | |||| || | ||||| |||||||||||| | || |||||| Sbjct: 2110 ggaggtgctatggtaagtacgcacggcattgatggggaagatttacatctaacaatgcct 2169 Query: 960 tctgggtctgaagtgtccaacttagtcgcaacaagtgaactcgagctcaagaaacgtttg 1019 ||| ||||||||||| | |||| |||||||||||||| |||||||| |||||||| Sbjct: 2170 actgaatctgaagtgtcaagtctagtggcaacaagtgaacttgagctcaaaaaacgtttt 2229 Query: 1020 gagatgatttcgcctataccagatatagatgaaccgtcaggacaggaaggtgctgaactc 1079 |||||| || ||||| ||||| |||||| | || | ||| |||||| |||||||| Sbjct: 2230 gagatggttcgacctattccagacatagataagccattagggaaggaagtggctgaactt 2289 Query: 1080 tcaaaaatacctattgatttgaagagcggggactggttgcttaaggttgtaccttggatt 1139 || ||||||||||||||||||| ||| |||||||||| |||| |||||||| ||| Sbjct: 2290 tctgaaatacctattgatttgaacggcgaggactggttggttaaagttgtaccccagatc 2349 Query: 1140 ggtggtcgtattattttgatgacacatcttcctactgattcccagtggcttcatagcagg 1199 |||||||||||||| | |||||||||||||| ||||||| || ||||| || |||| Sbjct: 2350 ggtggtcgtattatctcaatgacacatcttccatctgattctcaatggctacacagcaca 2409 Query: 1200 attgaaataaatggttatgaagaatacagtgggactgaatataggtctgctgggtgcaca 1259 | | || ||||| ||||| ||||| | || | ||||| ||| ||||||| |||||| Sbjct: 2410 aataggatcaatgggtatgaggaatataatgcggctgaagata---ctgctggctgcaca 2466 Query: 1260 gaagagtacaaagtcgttaggaggtatcttgagcaatcaggagaggaggaatctatttgt 1319 ||||||||||||||| |||||||||||| |||||||||||| | ||||||||||||||| Sbjct: 2467 gaagagtacaaagtcattaggaggtatcgcgagcaatcaggaaaagaggaatctatttgt 2526 Query: 1320 ttggaaggtgatattgggggtggtcttattcttcagcgccacatatccattt 1371 |||||||| ||||||||||||||| | ||||||||||||| |||||||||| Sbjct: 2527 ttggaaggagatattgggggtggtttggttcttcagcgccaaatatccattt 2578 Score = 91.7 bits (46), Expect = 1e-14 Identities = 175/218 (80%) Strand = Plus / Plus Query: 1561 gagaagtgacattagagggagaccttcggccaaatggggaatggatgctggtggacaaat 1620 ||||| ||||||| ||||||| ||||| || ||||||||||||||||| || |||||| Sbjct: 2771 gagaattgacatttgagggagttcttcgtcccaatggggaatggatgctagttgacaaac 2830 Query: 1621 gcgcaggggtgagcctggtcaatagttttgatcccagtcaggttagcaaatgcttggtgc 1680 | | |||||||||| ||| | || |||| |||||||||||| | ||| | ||| Sbjct: 2831 gtacgaatctgagcctggtaaattgcttcgatctcagtcaggttagtatatgtaagttgc 2890 Query: 1681 actggggaacaggtaatttgaacatggagctttggtcagaggaaaggccagtttccaagg 1740 | |||||||| | | ||||||||||||| || ||||| ||| |||| ||||||| |||| Sbjct: 2891 attggggaactgatcatttgaacatggaactgtggtcggagcaaagagcagtttctaagg 2950 Query: 1741 acacaccgttgaggatttgccaccagtacgagctgaga 1778 |||||||||| || ||||||||||| || ||| ||||| Sbjct: 2951 acacaccgttaagaatttgccaccattatgaggtgaga 2988
>dbj|AK121014.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048A03, full insert sequence Length = 3133 Score = 369 bits (186), Expect = 3e-98 Identities = 536/652 (82%), Gaps = 3/652 (0%) Strand = Plus / Plus Query: 720 aaagctgaaggtgttctattcgaagatgctggggatggatacgggttcacacaggggaac 779 |||||||||||||| || || ||||||| |||||||||||| | |||| || ||||| Sbjct: 1931 aaagctgaaggtgtcctctttgaagatgatggggatggatatgagttccttcaagggaat 1990 Query: 780 tatcttttgacatattatgttgcccaagtccactcatcagtggtttctgtgaaagttctg 839 |||||||||||||| |||||||| || ||||||||||||||||| |||| |||||| Sbjct: 1991 tatcttttgacatactatgttgcagaactccactcatcagtggttactgttaaagttgcc 2050 Query: 840 aaaactgaaggctcatggaacaggccaaaacgtaacttaaacataagtatattacttggt 899 ||||||||| |||||||| || ||||| || |||||||| |||| |||||| ||||| Sbjct: 2051 cgaactgaaggatcatggaagagaccaaatcgcaacttaaaaataaatatattgcttgga 2110 Query: 900 ggaggtgctatgataaattcgcatggtgtcgatggcgaagatttacatattacgatgcct 959 |||||||||||| ||| | |||| || | ||||| |||||||||||| | || |||||| Sbjct: 2111 ggaggtgctatggtaagtacgcacggcattgatggggaagatttacatctaacaatgcct 2170 Query: 960 tctgggtctgaagtgtccaacttagtcgcaacaagtgaactcgagctcaagaaacgtttg 1019 ||| ||||||||||| | |||| |||||||||||||| |||||||| |||||||| Sbjct: 2171 actgaatctgaagtgtcaagtctagtggcaacaagtgaacttgagctcaaaaaacgtttt 2230 Query: 1020 gagatgatttcgcctataccagatatagatgaaccgtcaggacaggaaggtgctgaactc 1079 |||||| || ||||| ||||| |||||| | || | ||| |||||| |||||||| Sbjct: 2231 gagatggttcgacctattccagacatagataagccattagggaaggaagtggctgaactt 2290 Query: 1080 tcaaaaatacctattgatttgaagagcggggactggttgcttaaggttgtaccttggatt 1139 || ||||||||||||||||||| ||| |||||||||| |||| |||||||| ||| Sbjct: 2291 tctgaaatacctattgatttgaacggcgaggactggttggttaaagttgtaccccagatc 2350 Query: 1140 ggtggtcgtattattttgatgacacatcttcctactgattcccagtggcttcatagcagg 1199 |||||||||||||| | |||||||||||||| ||||||| || ||||| || |||| Sbjct: 2351 ggtggtcgtattatctcaatgacacatcttccatctgattctcaatggctacacagcaca 2410 Query: 1200 attgaaataaatggttatgaagaatacagtgggactgaatataggtctgctgggtgcaca 1259 | | || ||||| ||||| ||||| | || | ||||| ||| ||||||| |||||| Sbjct: 2411 aataggatcaatgggtatgaggaatataatgcggctgaagata---ctgctggctgcaca 2467 Query: 1260 gaagagtacaaagtcgttaggaggtatcttgagcaatcaggagaggaggaatctatttgt 1319 ||||||||||||||| |||||||||||| |||||||||||| | ||||||||||||||| Sbjct: 2468 gaagagtacaaagtcattaggaggtatcgcgagcaatcaggaaaagaggaatctatttgt 2527 Query: 1320 ttggaaggtgatattgggggtggtcttattcttcagcgccacatatccattt 1371 |||||||| ||||||||||||||| | ||||||||||||| |||||||||| Sbjct: 2528 ttggaaggagatattgggggtggtttggttcttcagcgccaaatatccattt 2579 Score = 91.7 bits (46), Expect = 1e-14 Identities = 175/218 (80%) Strand = Plus / Plus Query: 1561 gagaagtgacattagagggagaccttcggccaaatggggaatggatgctggtggacaaat 1620 ||||| ||||||| ||||||| ||||| || ||||||||||||||||| || |||||| Sbjct: 2772 gagaattgacatttgagggagttcttcgtcccaatggggaatggatgctagttgacaaac 2831 Query: 1621 gcgcaggggtgagcctggtcaatagttttgatcccagtcaggttagcaaatgcttggtgc 1680 | | |||||||||| ||| | || |||| |||||||||||| | ||| | ||| Sbjct: 2832 gtacgaatctgagcctggtaaattgcttcgatctcagtcaggttagtatatgtaagttgc 2891 Query: 1681 actggggaacaggtaatttgaacatggagctttggtcagaggaaaggccagtttccaagg 1740 | |||||||| | | ||||||||||||| || ||||| ||| |||| ||||||| |||| Sbjct: 2892 attggggaactgatcatttgaacatggaactgtggtcggagcaaagagcagtttctaagg 2951 Query: 1741 acacaccgttgaggatttgccaccagtacgagctgaga 1778 |||||||||| || ||||||||||| || ||| ||||| Sbjct: 2952 acacaccgttaagaatttgccaccattatgaggtgaga 2989
>gb|AY104817.1| Zea mays PCO133887 mRNA sequence Length = 903 Score = 331 bits (167), Expect = 6e-87 Identities = 397/473 (83%), Gaps = 3/473 (0%) Strand = Plus / Minus Query: 1299 ggagaggaggaatctatttgtttggaaggtgatattgggggtggtcttattcttcagcgc 1358 ||||||||||||||||||||| ||||||| || ||||| |||||||| |||| |||||| Sbjct: 899 ggagaggaggaatctatttgtatggaaggagacattggtggtggtctggttctccagcgc 840 Query: 1359 cacatatccattttgcaagacaacccaaag---gttcagattaactctagcattgaagca 1415 || |||||||||||| | |||||||||||| |||||||| |||| |||||| | ||| Sbjct: 839 cagatatccattttgaaggacaacccaaagattgttcagatcgactccagcattcaggca 780 Query: 1416 agaagtgttggagctggctctggtgggttttcaaggttggtttgtttgcgagttcatccc 1475 |||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 779 agaagtgtaggagctggttctggtgggttttcaaggttggtctgtttacgagttcatcct 720 Query: 1476 actttcactcttctccacccaactgaggtggttgttgcgtttacagccatcaatggctca 1535 || ||||| || || |||||||||||||| || ||||| || || ||||||||||| ||| Sbjct: 719 acattcaccctgctgcacccaactgaggtagtagttgctttcacggccatcaatggttca 660 Query: 1536 aagcaagagttctctccagaatccagagaagtgacattagagggagaccttcggccaaat 1595 ||||||||| |||| || || | ||||| | ||||| ||||||||||| || || Sbjct: 659 aagcaagagatctccccggaggcaggagaaataacattcgagggagacctcaaacccaac 600 Query: 1596 ggggaatggatgctggtggacaaatgcgcaggggtgagcctggtcaatagttttgatccc 1655 || ||||||||||| |||||||| || | ||| ||||| |||| || | ||| ||||| Sbjct: 599 ggagaatggatgctagtggacaagtgtgtcgggctgagcttggtgaaccggtttaatccc 540 Query: 1656 agtcaggttagcaaatgcttggtgcactggggaacaggtaatttgaacatggagctttgg 1715 || |||||||||||||||| |||||||||||||| ||| || ||||||||||||| ||| Sbjct: 539 agggaggttagcaaatgctttgtgcactggggaactggtgatgtgaacatggagctctgg 480 Query: 1716 tcagaggaaaggccagtttccaaggacacaccgttgaggatttgccaccagta 1768 ||||||||||| || || || || || || ||||||||||||||||||||||| Sbjct: 479 tcagaggaaagaccggtgtctaatgagacgccgttgaggatttgccaccagta 427
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 234 bits (118), Expect = 1e-57 Identities = 175/194 (90%) Strand = Plus / Plus Query: 718 gtaaagctgaaggtgttctattcgaagatgctggggatggatacgggttcacacagggga 777 ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| Sbjct: 13442543 gtaaagctgaaggtgttctcttcgaagatgctgaggatggatatgggttcacacagggga 13442602 Query: 778 actatcttttgacatattatgttgcccaagtccactcatcagtggtttctgtgaaagttc 837 ||||||| ||||||||||||||||| | ||||||| ||||||||||||||||| || Sbjct: 13442603 actatctgttgacatattatgttgctgagctccactcgtcagtggtttctgtgaaggtct 13442662 Query: 838 tgaaaactgaaggctcatggaacaggccaaaacgtaacttaaacataagtatattacttg 897 ||||||||||||| || |||| || || ||||| ||||||||||||||||||||||||| Sbjct: 13442663 tgaaaactgaaggatcttggaggagacctaaacggaacttaaacataagtatattacttg 13442722 Query: 898 gtggaggtgctatg 911 |||||||||||||| Sbjct: 13442723 gtggaggtgctatg 13442736 Score = 208 bits (105), Expect = 6e-50 Identities = 168/189 (88%) Strand = Plus / Plus Query: 1596 ggggaatggatgctggtggacaaatgcgcaggggtgagcctggtcaatagttttgatccc 1655 ||||| |||||||| |||||||| |||| ||| |||| |||| ||| ||||||||||| Sbjct: 13446856 ggggagtggatgctagtggacaactgcgtaggactgagtttggtaaatcgttttgatccc 13446915 Query: 1656 agtcaggttagcaaatgcttggtgcactggggaacaggtaatttgaacatggagctttgg 1715 ||||||||||||||||| ||||||||||||||||| ||| || ||||||||||||||||| Sbjct: 13446916 agtcaggttagcaaatgtttggtgcactggggaaccggtgatgtgaacatggagctttgg 13446975 Query: 1716 tcagaggaaaggccagtttccaaggacacaccgttgaggatttgccaccagtacgagctg 1775 || |||||||| |||||||||||||| || |||||||| || ||||||||||||||| || Sbjct: 13446976 tcggaggaaagaccagtttccaaggagactccgttgagaatatgccaccagtacgaggtg 13447035 Query: 1776 agacaaaca 1784 ||||||||| Sbjct: 13447036 agacaaaca 13447044 Score = 174 bits (88), Expect = 8e-40 Identities = 156/178 (87%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 1278 aggaggtatcttgagcaatcaggagaggaggaatctatttgtttggaaggtgatattggg 1337 ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 13443782 aggaggtatcttgagcaatcaggggaggaggaatctgtttgtttggaaggagatattggt 13443841 Query: 1338 ggtggtcttattcttcagcgccacatatccattttgcaagacaacccaaaggtt---cag 1394 ||||| || |||| ||||| ||||||||||| ||| |||| ||||| ||| || ||| Sbjct: 13443842 ggtggcctagttctccagcgtcacatatccatcttgaaagataacccgaagattttccag 13443901 Query: 1395 attaactctagcattgaagcaagaagtgttggagctggctctggtgggttttcaaggt 1452 ||| |||| |||||| ||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 13443902 attgactcaagcattcaagcaagaaatgttggagctggttctggtgggttttcaaggt 13443959 Score = 149 bits (75), Expect = 5e-32 Identities = 90/95 (94%) Strand = Plus / Plus Query: 1176 gattcccagtggcttcatagcaggattgaaataaatggttatgaagaatacagtgggact 1235 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 13443530 gattcccagtggcttcatagcaggattgaaatcaatggttatgaagaatacagtgggact 13443589 Query: 1236 gaatataggtctgctgggtgcacagaagagtacaa 1270 ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 13443590 gaatataggtccgctggatgcactgaagaatacaa 13443624 Score = 145 bits (73), Expect = 7e-31 Identities = 130/149 (87%) Strand = Plus / Plus Query: 1020 gagatgatttcgcctataccagatatagatgaaccgtcaggacaggaaggtgctgaactc 1079 ||||||||| ||||||||| ||||| ||||| || | ||||| ||||| ||||| || Sbjct: 13443047 gagatgattaagcctatacctgatatggatgagccagctggacaagaaggggctgagctt 13443106 Query: 1080 tcaaaaatacctattgatttgaagagcggggactggttgcttaaggttgtaccttggatt 1139 ||||||| |||| ||||||||||||| ||||||||| |||||||||||||||| |||||| Sbjct: 13443107 tcaaaaacacctgttgatttgaagagtggggactggatgcttaaggttgtaccatggatt 13443166 Query: 1140 ggtggtcgtattattttgatgacacatct 1168 |||||||||||||| | |||||||||||| Sbjct: 13443167 ggtggtcgtattatctcgatgacacatct 13443195 Score = 135 bits (68), Expect = 7e-28 Identities = 161/192 (83%) Strand = Plus / Plus Query: 720 aaagctgaaggtgttctattcgaagatgctggggatggatacgggttcacacaggggaac 779 |||||||||||||| || || ||||||| |||||||||||| | |||| || ||||| Sbjct: 13492966 aaagctgaaggtgtcctctttgaagatgatggggatggatatgagttccttcaagggaat 13493025 Query: 780 tatcttttgacatattatgttgcccaagtccactcatcagtggtttctgtgaaagttctg 839 |||||||||||||| |||||||| || ||||||||||||||||| |||| |||||| Sbjct: 13493026 tatcttttgacatactatgttgcagaactccactcatcagtggttactgttaaagttgcc 13493085 Query: 840 aaaactgaaggctcatggaacaggccaaaacgtaacttaaacataagtatattacttggt 899 ||||||||| |||||||| || ||||| || |||||||| |||| |||||| ||||| Sbjct: 13493086 cgaactgaaggatcatggaagagaccaaatcgcaacttaaaaataaatatattgcttgga 13493145 Query: 900 ggaggtgctatg 911 |||||||||||| Sbjct: 13493146 ggaggtgctatg 13493157 Score = 117 bits (59), Expect = 2e-22 Identities = 98/111 (88%) Strand = Plus / Plus Query: 1448 aaggttggtttgtttgcgagttcatcccactttcactcttctccacccaactgaggtggt 1507 ||||||||| ||||||||||||||||| |||||||| ||||| |||||||| || ||||| Sbjct: 13446613 aaggttggtatgtttgcgagttcatccaactttcacacttctacacccaacagaagtggt 13446672 Query: 1508 tgttgcgtttacagccatcaatggctcaaagcaagagttctctccagaatc 1558 ||| || ||||| || |||||||| |||||||||||| |||| |||||||| Sbjct: 13446673 tgtggcttttacggctatcaatggttcaaagcaagagatctccccagaatc 13446723 Score = 117 bits (59), Expect = 2e-22 Identities = 86/95 (90%) Strand = Plus / Plus Query: 1277 taggaggtatcttgagcaatcaggagaggaggaatctatttgtttggaaggtgatattgg 1336 ||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||||| Sbjct: 13494112 taggaggtatcgcgagcaatcaggaaaagaggaatctatttgtttggaaggagatattgg 13494171 Query: 1337 gggtggtcttattcttcagcgccacatatccattt 1371 ||||||| | ||||||||||||| |||||||||| Sbjct: 13494172 gggtggtttggttcttcagcgccaaatatccattt 13494206 Score = 81.8 bits (41), Expect = 9e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 1071 gctgaactctcaaaaatacctattgatttgaagagcggggactggttgcttaaggttgta 1130 |||||||| || ||||||||||||||||||| ||| |||||||||| |||| |||||| Sbjct: 13493538 gctgaactttctgaaatacctattgatttgaacggcgaggactggttggttaaagttgta 13493597 Query: 1131 ccttggattggtggtcgtattattttgatgacacatcttcc 1171 || ||| |||||||||||||| | |||||||||||||| Sbjct: 13493598 ccccagatcggtggtcgtattatctcaatgacacatcttcc 13493638 Score = 81.8 bits (41), Expect = 9e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 1630 tgagcctggtcaatagttttgatcccagtcaggttagcaaatgcttggtgcactggggaa 1689 |||||||||| ||| | || |||| |||||||||||| | ||| | |||| ||||||| Sbjct: 13494829 tgagcctggtaaattgcttcgatctcagtcaggttagtatatgtaagttgcattggggaa 13494888 Query: 1690 caggtaatttgaacatggagctttggtcagaggaaaggccagtttccaaggacacaccgt 1749 | | | ||||||||||||| || ||||| ||| |||| ||||||| ||||||||||||| Sbjct: 13494889 ctgatcatttgaacatggaactgtggtcggagcaaagagcagtttctaaggacacaccgt 13494948 Query: 1750 tgaggatttgccaccagtacgagctgaga 1778 | || ||||||||||| || ||| ||||| Sbjct: 13494949 taagaatttgccaccattatgaggtgaga 13494977 Score = 65.9 bits (33), Expect = 5e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 930 gatggcgaagatttacatattacgatgccttctgggtctgaagtgtccaacttagtcgca 989 ||||| |||||||||||| | || |||||| ||| ||||||||||| | |||| ||| Sbjct: 13493257 gatggggaagatttacatctaacaatgcctactgaatctgaagtgtcaagtctagtggca 13493316 Query: 990 acaagtgaactcgagctcaagaaacgttt 1018 ||||||||||| |||||||| |||||||| Sbjct: 13493317 acaagtgaacttgagctcaaaaaacgttt 13493345 Score = 60.0 bits (30), Expect = 3e-05 Identities = 90/110 (81%) Strand = Plus / Plus Query: 911 gataaattcgcatggtgtcgatggcgaagatttacatattacgatgccttctgggtctga 970 ||||| ||||| |||| | ||||| ||||| ||||| | || |||||||||| ||||| Sbjct: 13442826 gataagttcgcgtggtattgatggtgaagaagtacatctgacaatgccttctgattctga 13442885 Query: 971 agtgtccaacttagtcgcaacaagtgaactcgagctcaagaaacgtttgg 1020 ||| |||| ||| || || ||||||||||| |||| ||||||||||||| Sbjct: 13442886 agtatccagcttggttgcgacaagtgaacttgagcaaaagaaacgtttgg 13442935 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1246 ctgctgggtgcacagaagagtacaaagtcgttagg 1280 ||||||| ||||||||||||||||||||| ||||| Sbjct: 13493924 ctgctggctgcacagaagagtacaaagtcattagg 13493958
>dbj|AP005831.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1123E10 Length = 134641 Score = 234 bits (118), Expect = 1e-57 Identities = 175/194 (90%) Strand = Plus / Plus Query: 718 gtaaagctgaaggtgttctattcgaagatgctggggatggatacgggttcacacagggga 777 ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| Sbjct: 22226 gtaaagctgaaggtgttctcttcgaagatgctgaggatggatatgggttcacacagggga 22285 Query: 778 actatcttttgacatattatgttgcccaagtccactcatcagtggtttctgtgaaagttc 837 ||||||| ||||||||||||||||| | ||||||| ||||||||||||||||| || Sbjct: 22286 actatctgttgacatattatgttgctgagctccactcgtcagtggtttctgtgaaggtct 22345 Query: 838 tgaaaactgaaggctcatggaacaggccaaaacgtaacttaaacataagtatattacttg 897 ||||||||||||| || |||| || || ||||| ||||||||||||||||||||||||| Sbjct: 22346 tgaaaactgaaggatcttggaggagacctaaacggaacttaaacataagtatattacttg 22405 Query: 898 gtggaggtgctatg 911 |||||||||||||| Sbjct: 22406 gtggaggtgctatg 22419 Score = 208 bits (105), Expect = 6e-50 Identities = 168/189 (88%) Strand = Plus / Plus Query: 1596 ggggaatggatgctggtggacaaatgcgcaggggtgagcctggtcaatagttttgatccc 1655 ||||| |||||||| |||||||| |||| ||| |||| |||| ||| ||||||||||| Sbjct: 26539 ggggagtggatgctagtggacaactgcgtaggactgagtttggtaaatcgttttgatccc 26598 Query: 1656 agtcaggttagcaaatgcttggtgcactggggaacaggtaatttgaacatggagctttgg 1715 ||||||||||||||||| ||||||||||||||||| ||| || ||||||||||||||||| Sbjct: 26599 agtcaggttagcaaatgtttggtgcactggggaaccggtgatgtgaacatggagctttgg 26658 Query: 1716 tcagaggaaaggccagtttccaaggacacaccgttgaggatttgccaccagtacgagctg 1775 || |||||||| |||||||||||||| || |||||||| || ||||||||||||||| || Sbjct: 26659 tcggaggaaagaccagtttccaaggagactccgttgagaatatgccaccagtacgaggtg 26718 Query: 1776 agacaaaca 1784 ||||||||| Sbjct: 26719 agacaaaca 26727 Score = 174 bits (88), Expect = 8e-40 Identities = 156/178 (87%), Gaps = 3/178 (1%) Strand = Plus / Plus Query: 1278 aggaggtatcttgagcaatcaggagaggaggaatctatttgtttggaaggtgatattggg 1337 ||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 23465 aggaggtatcttgagcaatcaggggaggaggaatctgtttgtttggaaggagatattggt 23524 Query: 1338 ggtggtcttattcttcagcgccacatatccattttgcaagacaacccaaaggtt---cag 1394 ||||| || |||| ||||| ||||||||||| ||| |||| ||||| ||| || ||| Sbjct: 23525 ggtggcctagttctccagcgtcacatatccatcttgaaagataacccgaagattttccag 23584 Query: 1395 attaactctagcattgaagcaagaagtgttggagctggctctggtgggttttcaaggt 1452 ||| |||| |||||| ||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 23585 attgactcaagcattcaagcaagaaatgttggagctggttctggtgggttttcaaggt 23642 Score = 149 bits (75), Expect = 5e-32 Identities = 90/95 (94%) Strand = Plus / Plus Query: 1176 gattcccagtggcttcatagcaggattgaaataaatggttatgaagaatacagtgggact 1235 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 23213 gattcccagtggcttcatagcaggattgaaatcaatggttatgaagaatacagtgggact 23272 Query: 1236 gaatataggtctgctgggtgcacagaagagtacaa 1270 ||||||||||| ||||| ||||| ||||| ||||| Sbjct: 23273 gaatataggtccgctggatgcactgaagaatacaa 23307 Score = 145 bits (73), Expect = 7e-31 Identities = 130/149 (87%) Strand = Plus / Plus Query: 1020 gagatgatttcgcctataccagatatagatgaaccgtcaggacaggaaggtgctgaactc 1079 ||||||||| ||||||||| ||||| ||||| || | ||||| ||||| ||||| || Sbjct: 22730 gagatgattaagcctatacctgatatggatgagccagctggacaagaaggggctgagctt 22789 Query: 1080 tcaaaaatacctattgatttgaagagcggggactggttgcttaaggttgtaccttggatt 1139 ||||||| |||| ||||||||||||| ||||||||| |||||||||||||||| |||||| Sbjct: 22790 tcaaaaacacctgttgatttgaagagtggggactggatgcttaaggttgtaccatggatt 22849 Query: 1140 ggtggtcgtattattttgatgacacatct 1168 |||||||||||||| | |||||||||||| Sbjct: 22850 ggtggtcgtattatctcgatgacacatct 22878 Score = 135 bits (68), Expect = 7e-28 Identities = 161/192 (83%) Strand = Plus / Plus Query: 720 aaagctgaaggtgttctattcgaagatgctggggatggatacgggttcacacaggggaac 779 |||||||||||||| || || ||||||| |||||||||||| | |||| || ||||| Sbjct: 72649 aaagctgaaggtgtcctctttgaagatgatggggatggatatgagttccttcaagggaat 72708 Query: 780 tatcttttgacatattatgttgcccaagtccactcatcagtggtttctgtgaaagttctg 839 |||||||||||||| |||||||| || ||||||||||||||||| |||| |||||| Sbjct: 72709 tatcttttgacatactatgttgcagaactccactcatcagtggttactgttaaagttgcc 72768 Query: 840 aaaactgaaggctcatggaacaggccaaaacgtaacttaaacataagtatattacttggt 899 ||||||||| |||||||| || ||||| || |||||||| |||| |||||| ||||| Sbjct: 72769 cgaactgaaggatcatggaagagaccaaatcgcaacttaaaaataaatatattgcttgga 72828 Query: 900 ggaggtgctatg 911 |||||||||||| Sbjct: 72829 ggaggtgctatg 72840 Score = 117 bits (59), Expect = 2e-22 Identities = 98/111 (88%) Strand = Plus / Plus Query: 1448 aaggttggtttgtttgcgagttcatcccactttcactcttctccacccaactgaggtggt 1507 ||||||||| ||||||||||||||||| |||||||| ||||| |||||||| || ||||| Sbjct: 26296 aaggttggtatgtttgcgagttcatccaactttcacacttctacacccaacagaagtggt 26355 Query: 1508 tgttgcgtttacagccatcaatggctcaaagcaagagttctctccagaatc 1558 ||| || ||||| || |||||||| |||||||||||| |||| |||||||| Sbjct: 26356 tgtggcttttacggctatcaatggttcaaagcaagagatctccccagaatc 26406 Score = 117 bits (59), Expect = 2e-22 Identities = 86/95 (90%) Strand = Plus / Plus Query: 1277 taggaggtatcttgagcaatcaggagaggaggaatctatttgtttggaaggtgatattgg 1336 ||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||||| Sbjct: 73795 taggaggtatcgcgagcaatcaggaaaagaggaatctatttgtttggaaggagatattgg 73854 Query: 1337 gggtggtcttattcttcagcgccacatatccattt 1371 ||||||| | ||||||||||||| |||||||||| Sbjct: 73855 gggtggtttggttcttcagcgccaaatatccattt 73889 Score = 81.8 bits (41), Expect = 9e-12 Identities = 86/101 (85%) Strand = Plus / Plus Query: 1071 gctgaactctcaaaaatacctattgatttgaagagcggggactggttgcttaaggttgta 1130 |||||||| || ||||||||||||||||||| ||| |||||||||| |||| |||||| Sbjct: 73221 gctgaactttctgaaatacctattgatttgaacggcgaggactggttggttaaagttgta 73280 Query: 1131 ccttggattggtggtcgtattattttgatgacacatcttcc 1171 || ||| |||||||||||||| | |||||||||||||| Sbjct: 73281 ccccagatcggtggtcgtattatctcaatgacacatcttcc 73321 Score = 81.8 bits (41), Expect = 9e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 1630 tgagcctggtcaatagttttgatcccagtcaggttagcaaatgcttggtgcactggggaa 1689 |||||||||| ||| | || |||| |||||||||||| | ||| | |||| ||||||| Sbjct: 74512 tgagcctggtaaattgcttcgatctcagtcaggttagtatatgtaagttgcattggggaa 74571 Query: 1690 caggtaatttgaacatggagctttggtcagaggaaaggccagtttccaaggacacaccgt 1749 | | | ||||||||||||| || ||||| ||| |||| ||||||| ||||||||||||| Sbjct: 74572 ctgatcatttgaacatggaactgtggtcggagcaaagagcagtttctaaggacacaccgt 74631 Query: 1750 tgaggatttgccaccagtacgagctgaga 1778 | || ||||||||||| || ||| ||||| Sbjct: 74632 taagaatttgccaccattatgaggtgaga 74660 Score = 65.9 bits (33), Expect = 5e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 930 gatggcgaagatttacatattacgatgccttctgggtctgaagtgtccaacttagtcgca 989 ||||| |||||||||||| | || |||||| ||| ||||||||||| | |||| ||| Sbjct: 72940 gatggggaagatttacatctaacaatgcctactgaatctgaagtgtcaagtctagtggca 72999 Query: 990 acaagtgaactcgagctcaagaaacgttt 1018 ||||||||||| |||||||| |||||||| Sbjct: 73000 acaagtgaacttgagctcaaaaaacgttt 73028 Score = 60.0 bits (30), Expect = 3e-05 Identities = 90/110 (81%) Strand = Plus / Plus Query: 911 gataaattcgcatggtgtcgatggcgaagatttacatattacgatgccttctgggtctga 970 ||||| ||||| |||| | ||||| ||||| ||||| | || |||||||||| ||||| Sbjct: 22509 gataagttcgcgtggtattgatggtgaagaagtacatctgacaatgccttctgattctga 22568 Query: 971 agtgtccaacttagtcgcaacaagtgaactcgagctcaagaaacgtttgg 1020 ||| |||| ||| || || ||||||||||| |||| ||||||||||||| Sbjct: 22569 agtatccagcttggttgcgacaagtgaacttgagcaaaagaaacgtttgg 22618 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 1246 ctgctgggtgcacagaagagtacaaagtcgttagg 1280 ||||||| ||||||||||||||||||||| ||||| Sbjct: 73607 ctgctggctgcacagaagagtacaaagtcattagg 73641
>ref|NM_113268.2| Arabidopsis thaliana hydrolase, hydrolyzing O-glycosyl compounds (AT3G23640) mRNA, complete cds Length = 3292 Score = 71.9 bits (36), Expect = 9e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 1400 ctctagcattgaagcaagaagtgttggagctggctctggtgggttttcaaggttggtttg 1459 ||||||||||||||| | |||||||| ||||| |||||||| ||||||||| |||| || Sbjct: 2676 ctctagcattgaagcccgtagtgttggtgctggttctggtggattttcaaggctggtatg 2735 Query: 1460 tttgcgagttcatcccactttcactctt 1487 || |||| ||||| |||||||||||| Sbjct: 2736 cttaagagtccatccaactttcactctt 2763 Score = 50.1 bits (25), Expect = 0.032 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1185 tggcttcatagcaggattgaaataaatggttatgaagaatacagtgggactga 1237 ||||||||||||||||| || || ||||||||||| || || ||||| ||||| Sbjct: 2458 tggcttcatagcaggatagatatcaatggttatgaggagtatagtggtactga 2510
>gb|BT008811.1| Arabidopsis thaliana At3g23640 gene, complete cds Length = 2976 Score = 71.9 bits (36), Expect = 9e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 1400 ctctagcattgaagcaagaagtgttggagctggctctggtgggttttcaaggttggtttg 1459 ||||||||||||||| | |||||||| ||||| |||||||| ||||||||| |||| || Sbjct: 2586 ctctagcattgaagcccgtagtgttggtgctggttctggtggattttcaaggctggtatg 2645 Query: 1460 tttgcgagttcatcccactttcactctt 1487 || |||| ||||| |||||||||||| Sbjct: 2646 cttaagagtccatccaactttcactctt 2673 Score = 50.1 bits (25), Expect = 0.032 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1185 tggcttcatagcaggattgaaataaatggttatgaagaatacagtgggactga 1237 ||||||||||||||||| || || ||||||||||| || || ||||| ||||| Sbjct: 2368 tggcttcatagcaggatagatatcaatggttatgaggagtatagtggtactga 2420
>gb|AY059821.1| Arabidopsis thaliana alpha glucosidase-like protein (At3g23650; MDB19.14) mRNA, complete cds Length = 3183 Score = 71.9 bits (36), Expect = 9e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 1400 ctctagcattgaagcaagaagtgttggagctggctctggtgggttttcaaggttggtttg 1459 ||||||||||||||| | |||||||| ||||| |||||||| ||||||||| |||| || Sbjct: 2676 ctctagcattgaagcccgtagtgttggtgctggttctggtggattttcaaggctggtatg 2735 Query: 1460 tttgcgagttcatcccactttcactctt 1487 || |||| ||||| |||||||||||| Sbjct: 2736 cttaagagtccatccaactttcactctt 2763 Score = 50.1 bits (25), Expect = 0.032 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1185 tggcttcatagcaggattgaaataaatggttatgaagaatacagtgggactga 1237 ||||||||||||||||| || || ||||||||||| || || ||||| ||||| Sbjct: 2458 tggcttcatagcaggatagatatcaatggttatgaggagtatagtggtactga 2510
>gb|BT002505.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 3307 Score = 71.9 bits (36), Expect = 9e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 1400 ctctagcattgaagcaagaagtgttggagctggctctggtgggttttcaaggttggtttg 1459 ||||||||||||||| | |||||||| ||||| |||||||| ||||||||| |||| || Sbjct: 2814 ctctagcattgaagcccgtagtgttggtgctggttctggtggattttcaaggctggtatg 2873 Query: 1460 tttgcgagttcatcccactttcactctt 1487 || |||| ||||| |||||||||||| Sbjct: 2874 cttaagagtccatccaactttcactctt 2901 Score = 50.1 bits (25), Expect = 0.032 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1185 tggcttcatagcaggattgaaataaatggttatgaagaatacagtgggactga 1237 ||||||||||||||||| || || ||||||||||| || || ||||| ||||| Sbjct: 2596 tggcttcatagcaggatagatatcaatggttatgaggagtatagtggtactga 2648
>emb|BX823724.1|CNS0A7UA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZF08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 3043 Score = 63.9 bits (32), Expect = 2e-06 Identities = 75/88 (85%), Gaps = 1/88 (1%) Strand = Plus / Plus Query: 1400 ctctagcattgaagcaagaagtgttggagctggctctggtgggttttcaaggttggtttg 1459 ||||||||||||||| | |||||||| ||||| |||||||| ||||||||| |||| || Sbjct: 2468 ctctagcattgaagcccgtagtgttggtgctggttctggtggattttcaaggctggtatg 2527 Query: 1460 tttgcgagttcatcccactttcactctt 1487 || |||| ||| |||||||||||||| Sbjct: 2528 cttaagagtccat-ccactttcactctt 2554 Score = 50.1 bits (25), Expect = 0.032 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1185 tggcttcatagcaggattgaaataaatggttatgaagaatacagtgggactga 1237 ||||||||||||||||| || || ||||||||||| || || ||||| ||||| Sbjct: 2250 tggcttcatagcaggatagatatcaatggttatgaggagtatagtggtactga 2302
>dbj|AB023036.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDB19 Length = 90349 Score = 60.0 bits (30), Expect = 3e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 1400 ctctagcattgaagcaagaagtgttggagctggctctggtgggttttcaaggtt 1453 ||||||||||||||| | |||||||| ||||| |||||||| ||||||||||| Sbjct: 72743 ctctagcattgaagcccgtagtgttggtgctggttctggtggattttcaaggtt 72796 Score = 50.1 bits (25), Expect = 0.032 Identities = 46/53 (86%) Strand = Plus / Plus Query: 1185 tggcttcatagcaggattgaaataaatggttatgaagaatacagtgggactga 1237 ||||||||||||||||| || || ||||||||||| || || ||||| ||||| Sbjct: 72397 tggcttcatagcaggatagatatcaatggttatgaggagtatagtggtactga 72449
>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017H17, complete sequence Length = 156331 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Minus Query: 106 agctaagcttcactactagtagtagttccgtgtgtttg 143 ||||||||| ||||||||||||||||| ||||||||| Sbjct: 21847 agctaagctacactactagtagtagttttgtgtgtttg 21810
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Minus Query: 106 agctaagcttcactactagtagtagttccgtgtgtttg 143 ||||||||| ||||||||||||||||| ||||||||| Sbjct: 163057 agctaagctacactactagtagtagttttgtgtgtttg 163020
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 52.0 bits (26), Expect = 0.008 Identities = 35/38 (92%) Strand = Plus / Minus Query: 106 agctaagcttcactactagtagtagttccgtgtgtttg 143 ||||||||| ||||||||||||||||| ||||||||| Sbjct: 21811004 agctaagctacactactagtagtagttttgtgtgtttg 21810967 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 agcagcagaggtcagcaacag 342 ||||||||||||||||||||| Sbjct: 5002499 agcagcagaggtcagcaacag 5002479
>gb|AC120135.7| Mus musculus chromosome 7, clone RP23-64O4, complete sequence Length = 220872 Score = 48.1 bits (24), Expect = 0.13 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1528 atggctcaaagcaagagttctctc 1551 |||||||||||||||||||||||| Sbjct: 129645 atggctcaaagcaagagttctctc 129668
>gb|AF085169.1|AF085169 Triticum aestivum ARK protein and LRk-type protein genes, partial cds Length = 3919 Score = 46.1 bits (23), Expect = 0.51 Identities = 29/31 (93%) Strand = Plus / Plus Query: 436 gagtaaatagcaaaaaactaccacaattggg 466 |||||||||||| |||||||||||| ||||| Sbjct: 2574 gagtaaatagcataaaactaccacatttggg 2604
>emb|AL772393.11| Mouse DNA sequence from clone RP23-398D18 on chromosome 4, complete sequence Length = 207495 Score = 46.1 bits (23), Expect = 0.51 Identities = 23/23 (100%) Strand = Plus / Plus Query: 39 agagtgagagagggagggggatg 61 ||||||||||||||||||||||| Sbjct: 106377 agagtgagagagggagggggatg 106399
>gb|AC140205.2| Mus musculus BAC clone RP24-344F2 from chromosome 8, complete sequence Length = 140215 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 873 aacttaaacataagtatattac 894 |||||||||||||||||||||| Sbjct: 125800 aacttaaacataagtatattac 125779
>gb|AC148089.8| Mus musculus chromosome 8, clone RP24-366L10, complete sequence Length = 178426 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 873 aacttaaacataagtatattac 894 |||||||||||||||||||||| Sbjct: 103453 aacttaaacataagtatattac 103474
>gb|AC164523.4| Mus musculus chromosome 5, clone RP24-245O20, complete sequence Length = 156556 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1212 ggttatgaagaatacagtggga 1233 |||||||||||||||||||||| Sbjct: 59921 ggttatgaagaatacagtggga 59900
>dbj|AK138326.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230067N19 product:ligand of numb-protein X 1, full insert sequence Length = 2300 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1212 ggttatgaagaatacagtggga 1233 |||||||||||||||||||||| Sbjct: 1910 ggttatgaagaatacagtggga 1931
>dbj|AK161194.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4832425B16 product:ligand of numb-protein X 1, full insert sequence Length = 2852 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1212 ggttatgaagaatacagtggga 1233 |||||||||||||||||||||| Sbjct: 2294 ggttatgaagaatacagtggga 2315
>dbj|AK164105.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530024M13 product:FIP1 like 1 (S. cerevisiae), full insert sequence Length = 3959 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1212 ggttatgaagaatacagtggga 1233 |||||||||||||||||||||| Sbjct: 3677 ggttatgaagaatacagtggga 3656
>ref|NM_010727.2| Mus musculus ligand of numb-protein X 1 (Lnx1), mRNA dbj|AK044127.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830092N08 product:ligand of numb-protein X 1, full insert sequence Length = 2679 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1212 ggttatgaagaatacagtggga 1233 |||||||||||||||||||||| Sbjct: 1892 ggttatgaagaatacagtggga 1913
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 28 agaaacaacaaagagtgagagaggga 53 ||||| |||||||||||||||||||| Sbjct: 5880569 agaaaaaacaaagagtgagagaggga 5880544
>gb|AC168205.7| Mus musculus chromosome 8, clone RP23-478P10, complete sequence Length = 174995 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 873 aacttaaacataagtatattac 894 |||||||||||||||||||||| Sbjct: 44607 aacttaaacataagtatattac 44586
>emb|AL162753.2|NMA2Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 2/7 Length = 349061 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1199 gattgaaataaatggttatgaa 1220 |||||||||||||||||||||| Sbjct: 129538 gattgaaataaatggttatgaa 129517
>dbj|AP005442.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073I05 Length = 182291 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 28 agaaacaacaaagagtgagagaggga 53 ||||| |||||||||||||||||||| Sbjct: 67679 agaaaaaacaaagagtgagagaggga 67654
>dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0556A11 Length = 138096 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 28 agaaacaacaaagagtgagagaggga 53 ||||| |||||||||||||||||||| Sbjct: 134714 agaaaaaacaaagagtgagagaggga 134689
>gb|AC120394.10| Mus musculus chromosome 9, clone RP24-325N9, complete sequence Length = 206641 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Minus Query: 313 agcaagaagagcagcagaggtcagca 338 ||||||| |||||||||||||||||| Sbjct: 15630 agcaagaggagcagcagaggtcagca 15605
>gb|AF034746.1|AF034746 Mus musculus LNXp70 (LNX) mRNA, complete cds Length = 2183 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1212 ggttatgaagaatacagtggga 1233 |||||||||||||||||||||| Sbjct: 1867 ggttatgaagaatacagtggga 1888
>gb|AF034745.1|AF034745 Mus musculus LNXp80 (LNX) mRNA, complete cds Length = 2555 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1212 ggttatgaagaatacagtggga 1233 |||||||||||||||||||||| Sbjct: 2163 ggttatgaagaatacagtggga 2184
>gb|AC164092.3| Mus musculus BAC clone RP23-366E4 from chromosome 9, complete sequence Length = 203636 Score = 44.1 bits (22), Expect = 2.0 Identities = 25/26 (96%) Strand = Plus / Plus Query: 313 agcaagaagagcagcagaggtcagca 338 ||||||| |||||||||||||||||| Sbjct: 39593 agcaagaggagcagcagaggtcagca 39618
>emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chromosome 2, complete sequence Length = 224038 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2011 ttgctacctgctgcaagttcat 2032 |||||||||||||||||||||| Sbjct: 217407 ttgctacctgctgcaagttcat 217386
>emb|AL359219.4|CNS05TEH Human chromosome 14 DNA sequence BAC C-2315A10 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 114957 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1709 gctttggtcagaggaaaggcca 1730 |||||||||||||||||||||| Sbjct: 59629 gctttggtcagaggaaaggcca 59650
>gb|AC152164.14| Mus musculus chromosome 8, clone RP24-118N20, complete sequence Length = 185586 Score = 44.1 bits (22), Expect = 2.0 Identities = 22/22 (100%) Strand = Plus / Minus Query: 873 aacttaaacataagtatattac 894 |||||||||||||||||||||| Sbjct: 107074 aacttaaacataagtatattac 107053
>ref|XM_001211800.1| Aspergillus terreus NIH2624 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 (ATEG_02622) mRNA, complete cds Length = 1746 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1304 ggaggaatctatttgtttgga 1324 ||||||||||||||||||||| Sbjct: 174 ggaggaatctatttgtttgga 154
>gb|AC139173.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0058H17, complete sequence Length = 153802 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 agcagcagaggtcagcaacag 342 ||||||||||||||||||||| Sbjct: 92655 agcagcagaggtcagcaacag 92675
>ref|XM_362229.1| Magnaporthe grisea 70-15 hypothetical protein (MG04674.4) partial mRNA Length = 2526 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1422 gttggagctggctctggtggg 1442 ||||||||||||||||||||| Sbjct: 202 gttggagctggctctggtggg 182
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1805 tttccaggatgcaacttgtct 1825 ||||||||||||||||||||| Sbjct: 2893466 tttccaggatgcaacttgtct 2893446
>gb|L23651.1| Caenorhabditis elegans cosmid C29E4, complete sequence Length = 40050 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1314 atttgtttggaaggtgatatt 1334 ||||||||||||||||||||| Sbjct: 29479 atttgtttggaaggtgatatt 29459
>gb|AC108840.13| Mus musculus chromosome 1, clone RP23-348P7, complete sequence Length = 209336 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 atgttgtgagaaacaacaaag 40 ||||||||||||||||||||| Sbjct: 125655 atgttgtgagaaacaacaaag 125635
>gb|AC113092.25| Mus musculus chromosome 6, clone RP23-309N11, complete sequence Length = 186431 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 aaagagtgagagagggagggg 57 ||||||||||||||||||||| Sbjct: 67731 aaagagtgagagagggagggg 67751
>gb|AC093341.5| Mus musculus chromosome 5, clone RP23-7E4, complete sequence Length = 220668 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 34 aacaaagagtgagagagggaggggg 58 ||||||||| ||||||||||||||| Sbjct: 155048 aacaaagagagagagagggaggggg 155072
>gb|AC127694.3| Mus musculus BAC clone RP23-235J3 from chromosome 7, complete sequence Length = 225732 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 agtgagagagggagggggatg 61 ||||||||||||||||||||| Sbjct: 178381 agtgagagagggagggggatg 178401
>gb|AC129201.3| Mus musculus BAC clone RP24-224A15 from chromosome 5, complete sequence Length = 147253 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 agagtgagagagggaggggga 59 ||||||||||||||||||||| Sbjct: 68886 agagtgagagagggaggggga 68906
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 747 gctggggatggatacgggttc 767 ||||||||||||||||||||| Sbjct: 519582 gctggggatggatacgggttc 519562
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1484 tcttctccacccaactgaggtggtt 1508 ||||||||||||||||| ||||||| Sbjct: 2059713 tcttctccacccaactgcggtggtt 2059737
>gb|AC154394.6| Mus musculus chromosome 18, clone RP23-315M1, complete sequence Length = 246033 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 agagtgagagagggaggggga 59 ||||||||||||||||||||| Sbjct: 192966 agagtgagagagggaggggga 192986
>gb|AC156608.10| Mus musculus chromosome 8, clone RP23-303A11, complete sequence Length = 229633 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 cttgtgtacttgtgtatgttg 25 ||||||||||||||||||||| Sbjct: 173706 cttgtgtacttgtgtatgttg 173686
>dbj|AK140984.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130090L17 product:unclassifiable, full insert sequence Length = 2488 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 aaagagtgagagagggagggg 57 ||||||||||||||||||||| Sbjct: 684 aaagagtgagagagggagggg 664
>dbj|AK086171.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930010F23 product:unclassifiable, full insert sequence Length = 2461 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 agtgagagagggagggggatg 61 ||||||||||||||||||||| Sbjct: 455 agtgagagagggagggggatg 435
>emb|Z95115.1|HS445C9 Human DNA sequence from clone CTA-445C9 on chromosome 22q12.1, complete sequence Length = 131398 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1718 agaggaaaggccagtttccaa 1738 ||||||||||||||||||||| Sbjct: 46758 agaggaaaggccagtttccaa 46778
>emb|AL731765.5| Human DNA sequence from clone RP11-268L7 on chromosome X, complete sequence Length = 64790 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 835 ttctgaaaactgaaggctcatggaa 859 ||||||||| ||||||||||||||| Sbjct: 12904 ttctgaaaagtgaaggctcatggaa 12880
>gb|AC133597.5| Mus musculus BAC clone RP24-313B5 from chromosome 16, complete sequence Length = 192699 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 agtgagagagggagggggatg 61 ||||||||||||||||||||| Sbjct: 99289 agtgagagagggagggggatg 99309
>emb|BX279525.12| Zebrafish DNA sequence from clone CH211-244C18 in linkage group 12, complete sequence Length = 173914 Score = 42.1 bits (21), Expect = 7.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 460 aattgggattgggccgaaattaaatcccattat 492 ||||||||||||||| |||||||| ||||||| Sbjct: 152051 aattgggattgggcctaaattaaactccattat 152019
>gb|AC109222.14| Mus musculus chromosome 18, clone RP23-251L6, complete sequence Length = 201310 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 agagtgagagagggaggggga 59 ||||||||||||||||||||| Sbjct: 17691 agagtgagagagggaggggga 17711
>emb|AL928692.9| Zebrafish DNA sequence from clone CH211-208D15 in linkage group 12, complete sequence Length = 215891 Score = 42.1 bits (21), Expect = 7.9 Identities = 30/33 (90%) Strand = Plus / Plus Query: 460 aattgggattgggccgaaattaaatcccattat 492 ||||||||||||||| |||||||| ||||||| Sbjct: 122971 aattgggattgggcctaaattaaactccattat 123003
>emb|BX005472.11| Zebrafish DNA sequence from clone CH211-119C22 in linkage group 11, complete sequence Length = 158170 Score = 42.1 bits (21), Expect = 7.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 460 aattgggattgggccgaaattaaat 484 ||||||||||||||| ||||||||| Sbjct: 4029 aattgggattgggcctaaattaaat 4053
>gb|AC175115.1| Mus musculus BAC clone RP23-395E24 from chromosome 5, complete sequence Length = 202831 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 agagtgagagagggaggggga 59 ||||||||||||||||||||| Sbjct: 39999 agagtgagagagggaggggga 39979
>dbj|AP005718.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-415G10, complete sequence Length = 186104 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1465 gagttcatcccactttcactc 1485 ||||||||||||||||||||| Sbjct: 59434 gagttcatcccactttcactc 59454
>dbj|AP001770.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-27I22, complete sequence Length = 73589 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1465 gagttcatcccactttcactc 1485 ||||||||||||||||||||| Sbjct: 32747 gagttcatcccactttcactc 32767
>dbj|AP000838.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-21A6, complete sequence Length = 109666 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1465 gagttcatcccactttcactc 1485 ||||||||||||||||||||| Sbjct: 106551 gagttcatcccactttcactc 106571
>gb|AC138119.5| Mus musculus BAC clone RP23-307D8 from chromosome 5, complete sequence Length = 196908 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 agagtgagagagggaggggga 59 ||||||||||||||||||||| Sbjct: 82473 agagtgagagagggaggggga 82493
>emb|AL122015.17|HSDJ8L15 Human DNA sequence from clone RP1-8L15 on chromosome 11p13, complete sequence Length = 111590 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1057 caggacaggaaggtgctgaac 1077 ||||||||||||||||||||| Sbjct: 9258 caggacaggaaggtgctgaac 9278
>gb|U82828.1|HSU82828 Homo sapiens ataxia telangiectasia (ATM) gene, complete cds Length = 184490 Score = 42.1 bits (21), Expect = 7.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1465 gagttcatcccactttcactc 1485 ||||||||||||||||||||| Sbjct: 171167 gagttcatcccactttcactc 171187 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 379,468,036 Number of extensions: 19970406 Number of successful extensions: 106219 Number of sequences better than 10.0: 70 Number of HSP's gapped: 106200 Number of HSP's successfully gapped: 109 Length of query: 2065 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2042 Effective length of database: 18,503,978,556 Effective search space: 37785124211352 Effective search space used: 37785124211352 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
