ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf55h01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q96VB9:HSP7F_CANAL Heat shock protein homolog SSE1 - Candida alb... 33 2.9
2O04379:AGO1_ARATH Protein argonaute - Arabidopsis thaliana (Mous... 33 3.8
3Q5ZJ02:ZN326_CHICK Zinc finger protein 326 - Gallus gallus (Chic... 33 4.9
4Q9SM43:VDE_SPIOL Violaxanthin de-epoxidase, chloroplast precurso... 32 6.4
5Q9XGW1:PINH_ARATH Protein PINHEAD - Arabidopsis thaliana (Mouse-... 32 6.4
6Q5K2K3:L_ISFV Large structural protein - Isfahan virus (ISFV) 32 6.4

>Q96VB9:HSP7F_CANAL Heat shock protein homolog SSE1 - Candida albicans (Yeast)|
          Length = 702
 Score = 33.5 bits (75), Expect = 2.9
 Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 34/185 (18%)
 Frame = +2

Query: 632  PADEKIAEEAGKSEVKEESKAT--GEVVKEGENGALWRAEAHLFLQMVAAFGLKDK--FD 799
            PA+ +  +E  + + +E  K     ++  E E+ AL  AE   F++  A+  ++DK  FD
Sbjct: 511  PAEGEEVDEDAEPQYREVKKLVKKNDLTIECESAALPDAELQAFIEKEASMVMEDKLVFD 570

Query: 800  GEFLKSL------------------FVANRRRKELAR-------FAYILGFEETVADVV- 901
             E  K+                   F +++ +++L+        + Y  G + T A  + 
Sbjct: 571  TEERKNQLEEYIYELRGKLDEEYKDFASDQEKEKLSGLLMKAEDWLYEDGEDSTKAKYIA 630

Query: 902  --QELLTSGNVIEGIYIAHEACLLERFPPAPLLHSYIKDSTEKAQAMLS--SGRRSSSAV 1069
              +EL + GNVI+G Y+A E    E++          K    +A AM    + +R +S  
Sbjct: 631  KYEELASIGNVIKGRYLAKEQEKKEQYRQ--------KQEAAQAAAMAEKMAAQREASKK 682

Query: 1070 EESKS 1084
            +ES S
Sbjct: 683  QESSS 687



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>O04379:AGO1_ARATH Protein argonaute - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 1048

 Score = 33.1 bits (74), Expect = 3.8
 Identities = 32/118 (27%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
 Frame = +2

Query: 917  SGNVIEGIYIAHEACLLERFPPAPLLHSYIKDSTEKAQAMLSSGRRSSSAVEESKSLECN 1096
            SGN++ G  +  + C    F      H+ I+ ++  A   +     + +A +  +SL  N
Sbjct: 906  SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTA-DGLQSLTNN 964

Query: 1097 ACKVVIRCVESCQLVPVFNIDHLKKKVAR--MVREKADRKRLGSGNRFQNKRARGAAG 1264
             C    RC  S  +VP     HL    AR  M  E +D   + SG+     R  G AG
Sbjct: 965  LCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGSM---ARGGGMAG 1019



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>Q5ZJ02:ZN326_CHICK Zinc finger protein 326 - Gallus gallus (Chicken)|
          Length = 565

 Score = 32.7 bits (73), Expect = 4.9
 Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
 Frame = +2

Query: 842  KELARFAYILGFEETVADVVQELLTSGNVIEGIYIAHEACLLERFPPAPLLHSYIKDSTE 1021
            KE+         +ET+  + ++      V+E +   HE C++ +F    +      + TE
Sbjct: 370  KEIESHLESAAHQETLDHIQKQTKFDKVVMEFL---HE-CMVNKFKKTAMRKQQTSNQTE 425

Query: 1022 KAQAM---LSSGRRSSSAVEESKSLECNACKVVIRCVESCQLVPVFNIDHLKKKVARMVR 1192
             AQA+   +  G  +   + + +++ C+AC V +  + S     + + DH K K A   R
Sbjct: 426  NAQAVEKDIMEGVTADDHMMKVETVHCSACSVYVPALHSSVQQHLKSPDHTKGKQA--YR 483

Query: 1193 EKADRK 1210
            E+  R+
Sbjct: 484  EQIKRE 489



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>Q9SM43:VDE_SPIOL Violaxanthin de-epoxidase, chloroplast precursor - Spinacia|
           oleracea (Spinach)
          Length = 472

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 22/70 (31%), Positives = 36/70 (51%)
 Frame = +2

Query: 641 EKIAEEAGKSEVKEESKATGEVVKEGENGALWRAEAHLFLQMVAAFGLKDKFDGEFLKSL 820
           EK  EE  ++ +KE  +  GE+  EG+   + + E  LF +++  F    K +  FLK L
Sbjct: 383 EKTVEEGERTIIKEVEQLEGEI--EGDLEKVGKTEMTLFQRLLEGFQELQKDEEYFLKEL 440

Query: 821 FVANRRRKEL 850
              N+  +EL
Sbjct: 441 ---NKEEREL 447



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>Q9XGW1:PINH_ARATH Protein PINHEAD - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 988

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 1/123 (0%)
 Frame = +2

Query: 917  SGNVIEGIYIAHEACLLERFPPAPLLHSYIKDSTEKAQAMLSSGRRSSSAVEESKSLECN 1096
            SGN++ G  +  + C    F      H+ I+ ++  A   +     + +A +  +SL  N
Sbjct: 855  SGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTA-DGIQSLTNN 913

Query: 1097 ACKVVIRCVESCQLVPVFNIDHLKKKVARMVREKADRKRLGSGNRFQNKRAR-GAAGPQS 1273
             C    RC  S  +VP     HL    AR   E    +  GS  +   K    G  G + 
Sbjct: 914  LCYTYARCTRSVSIVPPAYYAHLAAFRARFYLEPEIMQDNGSPGKKNTKTTTVGDVGVKP 973

Query: 1274 FPA 1282
             PA
Sbjct: 974  LPA 976



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>Q5K2K3:L_ISFV Large structural protein - Isfahan virus (ISFV)|
          Length = 2093

 Score = 32.3 bits (72), Expect = 6.4
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
 Frame = -2

Query: 1027 GLLSGVLYIRVKKRCRRKSLKQTCLMSN------IYTLDYIS*SKQFLNNICDGLLKPED 866
            G+L G++     +   R+SL Q    +N      I+ +D IS S  F+N   DG ++ E 
Sbjct: 1393 GVLDGLVRASACQVIHRRSLTQLKRPANAVYGGLIFLIDKISASSTFINLCRDGPIREEL 1452

Query: 865  IGKPRKFLPSTVSNKQALQELSIKLVFQSKCRN 767
               P K +P++     A   L I+  F+ +C++
Sbjct: 1453 SSIPHK-IPTSYPTSNADLGLHIRNYFKFQCKS 1484


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 237,256,801
Number of extensions: 4742271
Number of successful extensions: 15227
Number of sequences better than 10.0: 6
Number of HSP's gapped: 15202
Number of HSP's successfully gapped: 6
Length of query: 581
Length of database: 100,686,439
Length adjustment: 119
Effective length of query: 462
Effective length of database: 68,045,334
Effective search space: 31436944308
Effective search space used: 31436944308
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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