ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf55d18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK120417:Os02g0235600 | 312 | 2e-85 | 2 | AK062150: | 312 | 2e-85 | 3 | AK070605:Os05g0207300 | 312 | 2e-85 | 4 | AK067763:Os01g0205500 | 312 | 2e-85 | 5 | AF022736:Os05g0207300 | 312 | 2e-85 | 6 | Os06g0550000:Os06g0550000 | 286 | 1e-77 | 7 | AK063597: | 223 | 1e-58 | 8 | AF095708:Os03g0125000 | 46 | 4e-05 | 9 | AK104137:Os03g0125000 | 46 | 4e-05 | 10 | AK098999:Os03g0125000 | 46 | 4e-05 | 11 | AK070779:Os03g0125000 | 46 | 4e-05 | 12 | AK059557:Os03g0125000 | 46 | 4e-05 | 13 | AK072763:Os04g0441700 | 32 | 0.71 | 14 | AK102828:Os02g0273700 | 30 | 1.6 | 15 | AY323129:Os11g0572500 | 30 | 2.7 | 16 | AK068493:Os11g0572500 | 30 | 2.7 | 17 | Os04g0472400:Os04g0472400 | 28 | 7.8 | 18 | AK110478: | 28 | 7.8 | 19 | AK103631:Os01g0125900 | 28 | 7.8 | 20 | AK072568:Os12g0230600 | 28 | 7.8 | 21 | AK106759:Os01g0864000 | 28 | 7.9 | 22 | AK066085:Os07g0130500 | 28 | 7.9 |
|---|
>AK120417:Os02g0235600 | Length = 182 Score = 312 bits (800), Expect = 2e-85 Identities = 156/180 (86%), Positives = 165/180 (91%) Frame = +2 Query: 80 MSTEKKQMNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 259 M++EKKQ NPMR+IKVQKLVLNISVGESGDRLTRASKVLEQLSGQ+PVFSKARYTVRSFG Sbjct: 1 MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60 Query: 260 IRRNEKIACYVTIRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGMKYDP 439 IRRNEKIACYVT+RGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLG+KYDP Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDP 120 Query: 440 STGIYGMDFFVVLERAGYXXXXXXXXXXXVGIHQRVTKEDAMKWFQVKYEGVILNKSHAS 619 STGIYGMDF+VVLERAGY VGI RVTKEDAMKWFQVKYEGVILNK+ A+ Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQAN 180
>AK062150: | Length = 182 Score = 312 bits (799), Expect = 2e-85 Identities = 156/180 (86%), Positives = 165/180 (91%) Frame = +2 Query: 80 MSTEKKQMNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 259 M++EKKQ NPMR+IKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG Sbjct: 1 MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60 Query: 260 IRRNEKIACYVTIRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGMKYDP 439 IRRNEKIACYVT+RGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLG+KYDP Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120 Query: 440 STGIYGMDFFVVLERAGYXXXXXXXXXXXVGIHQRVTKEDAMKWFQVKYEGVILNKSHAS 619 STGIYGMDF+VVLERAGY VGI RVTKEDAMKWFQVKYEGVILNK+ A+ Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQAN 180
>AK070605:Os05g0207300 | Length = 182 Score = 312 bits (799), Expect = 2e-85 Identities = 156/180 (86%), Positives = 165/180 (91%) Frame = +2 Query: 80 MSTEKKQMNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 259 M++EKKQ NPMR+IKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG Sbjct: 1 MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60 Query: 260 IRRNEKIACYVTIRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGMKYDP 439 IRRNEKIACYVT+RGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLG+KYDP Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120 Query: 440 STGIYGMDFFVVLERAGYXXXXXXXXXXXVGIHQRVTKEDAMKWFQVKYEGVILNKSHAS 619 STGIYGMDF+VVLERAGY VGI RVTKEDAMKWFQVKYEGVILNK+ A+ Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQAN 180
>AK067763:Os01g0205500 | Length = 182 Score = 312 bits (799), Expect = 2e-85 Identities = 156/180 (86%), Positives = 165/180 (91%) Frame = +2 Query: 80 MSTEKKQMNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 259 M++EKKQ NPMR+IKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG Sbjct: 1 MASEKKQANPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60 Query: 260 IRRNEKIACYVTIRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGMKYDP 439 IRRNEKIACYVT+RGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLG+KYDP Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120 Query: 440 STGIYGMDFFVVLERAGYXXXXXXXXXXXVGIHQRVTKEDAMKWFQVKYEGVILNKSHAS 619 STGIYGMDF+VVLERAGY VGI RVTKEDAMKWFQVKYEGVILNK+ A+ Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQAN 180
>AF022736:Os05g0207300 | Length = 182 Score = 312 bits (799), Expect = 2e-85 Identities = 156/180 (86%), Positives = 165/180 (91%) Frame = +2 Query: 80 MSTEKKQMNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 259 M++EKKQ NPMR+IKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG Sbjct: 1 MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFG 60 Query: 260 IRRNEKIACYVTIRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGMKYDP 439 IRRNEKIACYVT+RGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLG+KYDP Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDP 120 Query: 440 STGIYGMDFFVVLERAGYXXXXXXXXXXXVGIHQRVTKEDAMKWFQVKYEGVILNKSHAS 619 STGIYGMDF+VVLERAGY VGI RVTKEDAMKWFQVKYEGVILNK+ A+ Sbjct: 121 STGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQAN 180
>Os06g0550000:Os06g0550000 | Length = 336 Score = 286 bits (732), Expect = 1e-77 Identities = 143/162 (88%), Positives = 149/162 (91%) Frame = +2 Query: 110 MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACY 289 MR+IKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACY Sbjct: 1 MREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACY 60 Query: 290 VTIRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGMKYDPSTGIYGMDFF 469 VT+RGEKAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLG+KYDPSTGIYGMDF+ Sbjct: 61 VTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFY 120 Query: 470 VVLERAGYXXXXXXXXXXXVGIHQRVTKEDAMKWFQVKYEGV 595 VVLERAGY VGI RVTKEDAMKWFQVKYEG+ Sbjct: 121 VVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGL 162
>AK063597: | Length = 199 Score = 223 bits (569), Expect = 1e-58 Identities = 110/176 (62%), Positives = 139/176 (78%) Frame = +2 Query: 74 AAMSTEKKQMNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRS 253 AA T+ K NPMR IK+ KL LNIS GE+G+RL +A+KVLEQL+GQ+PVFSKAR T+R+ Sbjct: 23 AAKITKAKSGNPMRQIKIAKLCLNISPGETGERLQKAAKVLEQLTGQTPVFSKARLTIRT 82 Query: 254 FGIRRNEKIACYVTIRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGMKY 433 FGIRRNEKIA + T+RGEKA +LL GL+VK++EL + NFS++G FGFGIQEHIDLG+KY Sbjct: 83 FGIRRNEKIAVHATVRGEKAAELLRRGLRVKDFELRKHNFSESGQFGFGIQEHIDLGLKY 142 Query: 434 DPSTGIYGMDFFVVLERAGYXXXXXXXXXXXVGIHQRVTKEDAMKWFQVKYEGVIL 601 DPS GI+GMDFFVVLER G VG +VTK++AMK+FQ K++G++L Sbjct: 143 DPSIGIFGMDFFVVLERPGCRVSRRKRAVASVGKQHKVTKKEAMKFFQEKFDGILL 198
>AF095708:Os03g0125000 | Length = 276 Score = 45.8 bits (107), Expect = 4e-05 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%) Frame = +2 Query: 122 KVQKLVLNISVG-ESGDR--LTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYV 292 KV+K+V+N +G E+G+ L A K L ++GQ PV +KA+ +V SF IR I V Sbjct: 101 KVEKIVVNCGLGAEAGNSKGLESAMKDLAMITGQWPVKTKAKKSVASFKIREGNTIGIAV 160 Query: 293 TIRGEKAMQLLE 328 T+RG L+ Sbjct: 161 TLRGRVMFNFLD 172
>AK104137:Os03g0125000 | Length = 279 Score = 45.8 bits (107), Expect = 4e-05 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%) Frame = +2 Query: 122 KVQKLVLNISVG-ESGDR--LTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYV 292 KV+K+V+N +G E+G+ L A K L ++GQ PV +KA+ +V SF IR I V Sbjct: 104 KVEKIVVNCGLGAEAGNSKGLESAMKDLAMITGQWPVKTKAKKSVASFKIREGNTIGIAV 163 Query: 293 TIRGEKAMQLLE 328 T+RG L+ Sbjct: 164 TLRGRVMFNFLD 175
>AK098999:Os03g0125000 | Length = 279 Score = 45.8 bits (107), Expect = 4e-05 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%) Frame = +2 Query: 122 KVQKLVLNISVG-ESGDR--LTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYV 292 KV+K+V+N +G E+G+ L A K L ++GQ PV +KA+ +V SF IR I V Sbjct: 104 KVEKIVVNCGLGAEAGNSKGLESAMKDLAMITGQWPVKTKAKKSVASFKIREGNTIGIAV 163 Query: 293 TIRGEKAMQLLE 328 T+RG L+ Sbjct: 164 TLRGRVMFNFLD 175
>AK070779:Os03g0125000 | Length = 279 Score = 45.8 bits (107), Expect = 4e-05 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%) Frame = +2 Query: 122 KVQKLVLNISVG-ESGDR--LTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYV 292 KV+K+V+N +G E+G+ L A K L ++GQ PV +KA+ +V SF IR I V Sbjct: 104 KVEKIVVNCGLGAEAGNSKGLESAMKDLAMITGQWPVKTKAKKSVASFKIREGNTIGIAV 163 Query: 293 TIRGEKAMQLLE 328 T+RG L+ Sbjct: 164 TLRGRVMFNFLD 175
>AK059557:Os03g0125000 | Length = 279 Score = 45.8 bits (107), Expect = 4e-05 Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%) Frame = +2 Query: 122 KVQKLVLNISVG-ESGDR--LTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYV 292 KV+K+V+N +G E+G+ L A K L ++GQ PV +KA+ +V SF IR I V Sbjct: 104 KVEKIVVNCGLGAEAGNSKGLESAMKDLAMITGQWPVKTKAKKSVASFKIREGNTIGIAV 163 Query: 293 TIRGEKAMQLLE 328 T+RG L+ Sbjct: 164 TLRGRVMFNFLD 175
>AK072763:Os04g0441700 | Length = 269 Score = 31.6 bits (70), Expect = 0.71 Identities = 17/48 (35%), Positives = 20/48 (41%) Frame = +1 Query: 91 EEADEPHAGYQGAEARPQHLRR*ERRSSHPRLQGAGAAEWTITSVLQG 234 EE DEPH G A + LR + PR + AG VL G Sbjct: 48 EELDEPHGGEHLRHAEHEELRHDPQHGHRPRRRAAGGQGQVAAPVLDG 95
>AK102828:Os02g0273700 | Length = 634 Score = 30.4 bits (67), Expect = 1.6 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Frame = +1 Query: 499 LPPP--QVQGPCRYPPEGHQGGRHEVVPGQV*GCHPQ 603 LPPP ++Q PP+ Q G+ + PGQ G HPQ Sbjct: 437 LPPPPWEIQQSMDNPPQPTQLGQMPLQPGQPVGMHPQ 473
>AY323129:Os11g0572500 | Length = 332 Score = 29.6 bits (65), Expect = 2.7 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +1 Query: 103 EPHAGYQGAEARPQHLRR*ERRSSHPRLQGAGAAEWTITSVLQGEV 240 E H G G+ RPQ L SSHP + AG+ +S +QGEV Sbjct: 92 EGHRGRSGSHGRPQFL----VFSSHPNMPSAGSVS---SSSVQGEV 130
>AK068493:Os11g0572500 | Length = 332 Score = 29.6 bits (65), Expect = 2.7 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +1 Query: 103 EPHAGYQGAEARPQHLRR*ERRSSHPRLQGAGAAEWTITSVLQGEV 240 E H G G+ RPQ L SSHP + AG+ +S +QGEV Sbjct: 92 EGHRGRSGSHGRPQFL----VFSSHPNMPSAGSVS---SSSVQGEV 130
>Os04g0472400:Os04g0472400 | Length = 697 Score = 28.1 bits (61), Expect = 7.8 Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 2/46 (4%) Frame = -2 Query: 566 SWRPPW*P--SGGYRHGPCTCGGGRHGTQHARAPRRSPYHRCQ*MD 435 +W W P G H C G HG R PR P HR D Sbjct: 106 AWVDSWYPVDPSGSTHWHCCILGEFHGASLIRPPRTMPNHRTSHQD 151
>AK110478: | Length = 881 Score = 28.1 bits (61), Expect = 7.8 Identities = 29/81 (35%), Positives = 35/81 (43%), Gaps = 4/81 (4%) Frame = -3 Query: 616 RMGLVEDDTLILDLEPLHGVLLGDPL-VDTDTGLAPAAAGDTV--PSTLEHHEEVHTIDA 446 + G+V D++L L P+ VD D A AAAGDT L H + A Sbjct: 193 KRGVVSDESLAHITRGTRPGLFALPVPVDADAAAAAAAAGDTKADAGVLGH------VRA 246 Query: 445 SRWIVLHAEID-VLLDTEAKA 386 WI AE D VL D A A Sbjct: 247 GIWICSDAEFDGVLRDVLAPA 267
>AK103631:Os01g0125900 | Length = 1063 Score = 28.1 bits (61), Expect = 7.8 Identities = 13/31 (41%), Positives = 21/31 (67%) Frame = -3 Query: 643 LAIATSFLARMGLVEDDTLILDLEPLHGVLL 551 +A AT +MGLV D +L++DL+ HG ++ Sbjct: 141 VASATDPTGQMGLVADVSLVVDLQGPHGEII 171
>AK072568:Os12g0230600 | Length = 215 Score = 28.1 bits (61), Expect = 7.8 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -2 Query: 545 PSGGYRHGPCTCGGGRHGTQHARA 474 PSGG G CT GGG G RA Sbjct: 89 PSGGVIVGACTAGGGEEGGGVGRA 112
>AK106759:Os01g0864000 | Length = 201 Score = 28.1 bits (61), Expect = 7.9 Identities = 18/39 (46%), Positives = 21/39 (53%) Frame = +1 Query: 88 GEEADEPHAGYQGAEARPQHLRR*ERRSSHPRLQGAGAA 204 G+EA E A AEA +HL R RR PR + A AA Sbjct: 58 GDEA-EAEAAASAAEAGRRHLLRSGRRCRRPRRRAAAAA 95
>AK066085:Os07g0130500 | Length = 147 Score = 28.1 bits (61), Expect = 7.9 Identities = 21/56 (37%), Positives = 28/56 (50%) Frame = -1 Query: 330 LSSSCIAFSPLIVT*HAIFSLRLIPKDLTVYLALENTGDCPLSCSSTLEARVRRSP 163 L++ C SP T HA F L+ P L L++ +T D CSST + RSP Sbjct: 57 LANGCEHKSPSFSTRHASFMLQF-PCSL---LSIVSTIDPFCQCSSTQSTNINRSP 108 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,077,171 Number of extensions: 547092 Number of successful extensions: 1742 Number of sequences better than 10.0: 22 Number of HSP's gapped: 1740 Number of HSP's successfully gapped: 22 Length of query: 278 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 179 Effective length of database: 11,435,796 Effective search space: 2047007484 Effective search space used: 2047007484 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
