ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58o19 |
|---|---|
| Clone Library Name | barley_pub |
>Q5BK10:CAN13_RAT Calpain-13 - Rattus norvegicus (Rat)| Length = 668 Score = 36.6 bits (83), Expect = 0.13 Identities = 18/43 (41%), Positives = 27/43 (62%) Frame = +3 Query: 294 KYLPGPHYDPPSKERLKALMNEFDIDMNGLLDREEFAEFIRKL 422 +YL GP D S ++ +++M D+ +NG LDREEFA +L Sbjct: 527 EYLTGPPGDTFSLDQCQSIMALMDLKVNGRLDREEFARLQSRL 569
>Q3UW68:CAN13_MOUSE Calpain-13 - Mus musculus (Mouse)| Length = 665 Score = 33.5 bits (75), Expect = 1.1 Identities = 16/43 (37%), Positives = 27/43 (62%) Frame = +3 Query: 294 KYLPGPHYDPPSKERLKALMNEFDIDMNGLLDREEFAEFIRKL 422 ++L GP D S ++ +++M D+ +NG LD+EEFA +L Sbjct: 524 EFLTGPPGDTFSLDQCQSIMALMDLKVNGRLDQEEFARLRSRL 566
>P0C230:PRT_OSITU Protamine - Osilinus turbinatus (Snail) (Monodonta turbinata)| Length = 106 Score = 33.1 bits (74), Expect = 1.5 Identities = 21/62 (33%), Positives = 28/62 (45%) Frame = +2 Query: 455 ADHHAGRRPCAGAGDQKGNRGRPRRRQGSAQGAQCHLRLRHHPGRRAHPEIRRGRRVEEA 634 A A RR AG ++ R RRR+ SA + R R R++ RRGR+V Sbjct: 25 AKRSASRRRSRSAGRRRRRRTASRRRRRSASRRRSVSRRRRRRSRKSRGRRRRGRKVRRR 84 Query: 635 SV 640 V Sbjct: 85 RV 86
>P15396:ENPP3_BOVIN Ectonucleotide pyrophosphatase/phosphodiesterase family member 3 -| Bos taurus (Bovine) Length = 874 Score = 32.7 bits (73), Expect = 2.0 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 9/35 (25%) Frame = +1 Query: 682 GCKCDVICRVKGDALWDL---------YFFCNAFR 759 GC+CDV C+ +GD WD + CN FR Sbjct: 68 GCRCDVGCKGRGDCCWDFEDTCVQSTQIWTCNKFR 102
>P04109:SPE1A_STRPU Calcium-binding protein SPEC 1A - Strongylocentrotus purpuratus| (Purple sea urchin) Length = 152 Score = 32.3 bits (72), Expect = 2.5 Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 26/107 (24%) Frame = +3 Query: 174 RKITDKVFDRLTEDTQRREKEALQFEEVYIAVL--------------CVYNDINKYLPGP 311 + TDK D++ D E + F E+ + + ++D++K G Sbjct: 44 KSYTDKQIDKMISDVDTDESGTIDFSEMLMGIAEQMVKWTWKEEHYTKAFDDMDKDGNGS 103 Query: 312 ------------HYDPPSKERLKALMNEFDIDMNGLLDREEFAEFIR 416 P ++++KA++ + D + +G +DREEF + I+ Sbjct: 104 LSPQELREALSASKPPMKRKKIKAIIQKADANKDGKIDREEFMKLIK 150
>P06803:PIM1_MOUSE Proto-oncogene serine/threonine-protein kinase Pim-1 - Mus musculus| (Mouse) Length = 397 Score = 32.3 bits (72), Expect = 2.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +2 Query: 512 RGRPRRRQGSAQGAQCHLRLRHHPGRRAHPEIRRGRRVEEASVALRCAL*MHQ 670 RG+PR+R S+ + LR R A + GRR+ +S+ RC H+ Sbjct: 23 RGQPRQRPQSSSDSPSALRASRSQSRNATRSLSPGRRLSPSSLRRRCCSSRHR 75
>Q5R5M5:ENPP3_PONPY Ectonucleotide pyrophosphatase/phosphodiesterase family member 3 -| Pongo pygmaeus (Orangutan) Length = 873 Score = 32.3 bits (72), Expect = 2.6 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 9/34 (26%) Frame = +1 Query: 685 CKCDVICRVKGDALWDL---------YFFCNAFR 759 C+CDV C+ +GD WD + CN FR Sbjct: 69 CRCDVACKDRGDCCWDFEDTCVESTRIWMCNQFR 102
>O14638:ENPP3_HUMAN Ectonucleotide pyrophosphatase/phosphodiesterase family member 3 -| Homo sapiens (Human) Length = 875 Score = 32.3 bits (72), Expect = 2.6 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 9/34 (26%) Frame = +1 Query: 685 CKCDVICRVKGDALWDL---------YFFCNAFR 759 C+CDV C+ +GD WD + CN FR Sbjct: 69 CRCDVACKDRGDCCWDFEDTCVESTRIWMCNKFR 102
>Q9H9J4:UBP42_HUMAN Ubiquitin carboxyl-terminal hydrolase 42 - Homo sapiens (Human)| Length = 1325 Score = 32.0 bits (71), Expect = 3.3 Identities = 21/57 (36%), Positives = 26/57 (45%) Frame = +2 Query: 428 RVTLCDQPQADHHAGRRPCAGAGDQKGNRGRPRRRQGSAQGAQCHLRLRHHPGRRAH 598 R L ++P DH+ GRR C A R R R R S + H L HP R +H Sbjct: 1085 RAGLHERPHKDHNRGRRGCEPA------RERERHRPSSPRAGAPH-ALAPHPDRFSH 1134
>Q9M7R0:ALL8_OLEEU Calcium-binding allergen Ole e 8 - Olea europaea (Common olive)| Length = 171 Score = 31.6 bits (70), Expect = 4.3 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +3 Query: 327 SKERLKALMNEFDIDMNGLLDREEFAEFIRKLT 425 SKE + +M E D D +G ++ +EFA F++ T Sbjct: 53 SKEEIGRIMEEIDTDKDGFINVQEFAAFVKAET 85
>P21788:SP15_HEMPU 15 kDa calcium-binding protein - Hemicentrotus pulcherrimus (Sea| urchin) Length = 150 Score = 31.2 bits (69), Expect = 5.7 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 1/97 (1%) Frame = +3 Query: 129 LQEKLQGRHWKERQVRKITDKVFDRLTEDTQRREKEALQFEEVYIAVLCVYNDINKYLPG 308 + EK+ WK+ +K D D + L EE+++A+ Sbjct: 72 IAEKMMKWTWKKSHFQKAFD--------DMDKDGNGVLSPEELHLAM------------S 111 Query: 309 PHYDPP-SKERLKALMNEFDIDMNGLLDREEFAEFIR 416 +PP SKE + A++ + D D +G ++R+EF + I+ Sbjct: 112 TRIEPPMSKEAIDAIIAKADCDGDGKINRKEFVKLIK 148
>P12753:RAD50_YEAST DNA repair protein RAD50 - Saccharomyces cerevisiae (Baker's yeast)| Length = 1312 Score = 31.2 bits (69), Expect = 5.7 Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 7/97 (7%) Frame = +3 Query: 138 KLQGRHWKERQVRKI---TDKVFDRLTEDTQRREKEALQFEEVYIAVLCVYNDINKYLPG 308 K + +K + ++++ TD F++ +DT + EKE L + + N IN+ + Sbjct: 693 KFENESFKSKLLQELKTKTDANFEKTLKDTVQNEKEYLHSLRLLEKHIITLNSINEKIDN 752 Query: 309 PHYD-PPSKERL---KALMNEFDIDMNGLLDREEFAE 407 +KE K+ ++E ++D L D +E AE Sbjct: 753 SQKCLEKAKEETKTSKSKLDELEVDSTKLKDEKELAE 789
>Q24956:CATR_GIALA Caltractin - Giardia lamblia (Giardia intestinalis)| Length = 176 Score = 31.2 bits (69), Expect = 5.7 Identities = 15/36 (41%), Positives = 22/36 (61%) Frame = +3 Query: 327 SKERLKALMNEFDIDMNGLLDREEFAEFIRKLTAES 434 S E L A++ EFD D +G +D E+F +R +A S Sbjct: 141 SDEELLAMIQEFDRDGDGEIDEEDFIAILRSTSAFS 176
>Q9RRR1:KPTA_DEIRA Probable RNA 2'-phosphotransferase - Deinococcus radiodurans| Length = 283 Score = 31.2 bits (69), Expect = 5.7 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Frame = +2 Query: 80 SPASADARRHGAGLGVSAREAPRAALEGEAGAED--HRQGVRPAHRGH 217 +P + + RH V A A G+ GA D R+G+RP HR H Sbjct: 140 APRAGEGWRHAGTRRVGAAGAAARLPAGQPGAPDAIRREGLRPVHRHH 187
>A1KB21:RS3_AZOSB 30S ribosomal protein S3 - Azoarcus sp. (strain BH72)| Length = 260 Score = 30.8 bits (68), Expect = 7.4 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Frame = +2 Query: 446 QPQADHHAGRRPCAGAGDQKGNRGRPRR---RQGSAQGAQ 556 +P+AD+ GRR GA G GRP R R+G QG Q Sbjct: 218 EPEADNRRGRR---GAPRNDGGEGRPGRRPARRGDGQGRQ 254
>O27041:VATI_METTH V-type ATP synthase subunit I - Methanobacterium| thermoautotrophicum Length = 658 Score = 30.4 bits (67), Expect = 9.7 Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 1/112 (0%) Frame = +3 Query: 126 SLQEKLQGRHWKERQVRKI-TDKVFDRLTEDTQRREKEALQFEEVYIAVLCVYNDINKYL 302 +++E + +++R+V ++ T+ + +R E R E E EE N+++ Sbjct: 93 TIREFINPPIFEKREVEELDTESLIERAEETLGRVESETRVMEEKL-------NELDSER 145 Query: 303 PGPHYDPPSKERLKALMNEFDIDMNGLLDREEFAEFIRKLTAESLCAISLKL 458 E+LK +FDID + L D E ++TAE+L + KL Sbjct: 146 SAVESSLSVAEKLK----DFDIDFSDLQDSEYITGIAGRITAENLPELRDKL 193
>P0A1B9:SPAL_SALTY Probable ATP synthase spaL - Salmonella typhimurium| Length = 431 Score = 30.4 bits (67), Expect = 9.7 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = +3 Query: 129 LQEKLQGR-HWKERQVRKITDKVFDRLTEDTQRREKEALQFEEVYIAVLCVYNDINKYLP 305 L KL G+ H+ V K +VF ++T T + A++ + L ++ D+ +Y P Sbjct: 328 LSRKLAGQGHYPAIDVLKSVSRVFGQVTTPTHAEQASAVRKLMTRLEELQLFIDLGEYRP 387 Query: 306 GPHYD 320 G + D Sbjct: 388 GENID 392
>P0A1C0:SPAL_SALTI Probable ATP synthase spaL - Salmonella typhi| Length = 431 Score = 30.4 bits (67), Expect = 9.7 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = +3 Query: 129 LQEKLQGR-HWKERQVRKITDKVFDRLTEDTQRREKEALQFEEVYIAVLCVYNDINKYLP 305 L KL G+ H+ V K +VF ++T T + A++ + L ++ D+ +Y P Sbjct: 328 LSRKLAGQGHYPAIDVLKSVSRVFGQVTTPTHAEQASAVRKLMTRLEELQLFIDLGEYRP 387 Query: 306 GPHYD 320 G + D Sbjct: 388 GENID 392
>P46065:GUC1A_BOVIN Guanylyl cyclase-activating protein 1 - Bos taurus (Bovine)| Length = 205 Score = 30.4 bits (67), Expect = 9.7 Identities = 13/40 (32%), Positives = 24/40 (60%) Frame = +3 Query: 330 KERLKALMNEFDIDMNGLLDREEFAEFIRKLTAESLCAIS 449 +++L+ +D+D NG +DR+E IR + A + C+ S Sbjct: 89 EQKLRWYFKLYDVDGNGCIDRDELLTIIRAIRAINPCSDS 128
>Q8REF0:DEF_FUSNN Peptide deformylase - Fusobacterium nucleatum subsp. nucleatum| Length = 174 Score = 30.4 bits (67), Expect = 9.7 Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Frame = +3 Query: 171 VRKITDKVFDRLTEDTQRREKEALQFEEVYIAVLCVYNDINKYLP--GPHYDPPSKERLK 344 +RK+ + + LTE+TQ E+ L +Y V + KYL G + ++ L Sbjct: 69 LRKVINPIIVPLTEETQEFEEGCLSVPGIYKKVERPKRVLLKYLNEYGKEVEEIAENFLA 128 Query: 345 ALMNEFDIDMNGLLDREEFAEFIRKLTAESLCAI 446 ++ + ++G+L E+ + ++L A+ L I Sbjct: 129 VVVQHENDHLDGILFIEKISPMAKRLIAKKLANI 162
>Q6MZZ7:CAN13_HUMAN Calpain-13 - Homo sapiens (Human)| Length = 669 Score = 30.4 bits (67), Expect = 9.7 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +3 Query: 300 LPGPHYDPPSKERLKALMNEFDIDMNGLLDREEFAEFIRKL 422 L GP D S + ++L+ ++ +NG LD+EEFA ++L Sbjct: 530 LTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL 570 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 105,892,502 Number of extensions: 2001209 Number of successful extensions: 8072 Number of sequences better than 10.0: 21 Number of HSP's gapped: 8050 Number of HSP's successfully gapped: 21 Length of query: 291 Length of database: 100,686,439 Length adjustment: 112 Effective length of query: 179 Effective length of database: 69,965,399 Effective search space: 12523806421 Effective search space used: 12523806421 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
