ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58o19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001060299.1| Oryza sativa (japonica cultivar-group) Os04g0601400 (Os04g0601400) mRNA, complete cds Length = 795 Score = 460 bits (232), Expect = e-126 Identities = 451/524 (86%) Strand = Plus / Plus Query: 104 cgccatggggcaggtctgggcgtctctgcaagagaagctccaagggcggcactggaagga 163 |||||||||||| | |||||||||||| || || || ||||||||| |||| |||||||| Sbjct: 82 cgccatggggcaagcctgggcgtctctccaggataaactccaagggaggcaatggaagga 141 Query: 164 gaggcaggtgcggaagatcaccgacaaggtgttcgaccggctcacagaggacacgcagag 223 || ||||||| |||||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 142 gaagcaggtgaggaagatcacggacaaggtgttcgaccgcctcaccgaggacaccaagaa 201 Query: 224 gcgcgagaaggaggccctccagttcgaggaggtctacatcgccgtcctctgcgtctacaa 283 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 202 gcgcgagcaggaggccctcaccttcgaggaggtctacatcgccgtcctctgcgtctacaa 261 Query: 284 cgacatcaacaagtacttgccggggccgcactacgaccccccgtccaaggagaggctcaa 343 |||||||||||||||||| || ||||||||||| || || || |||||||||| |||||| Sbjct: 262 cgacatcaacaagtacttaccagggccgcactatgatccgccctccaaggagaagctcaa 321 Query: 344 ggctctcatgaatgagtttgacattgacatgaacggtctcctggaccgtgaggagtttgc 403 ||| | |||||||||| ||||| || || |||| ||||||||||| |||||||| || Sbjct: 322 ggccatgatgaatgagtacgacatcaacctggacgggctcctggaccgggaggagttcgc 381 Query: 404 ggagttcatccggaagctgaccgccgagtcactctgtgcgatcagcctcaagctgatcat 463 ||||||||||||||||||||| || ||||| || || ||||||||| |||||||| | | Sbjct: 382 ggagttcatccggaagctgacggcggagtcgctgtgcgcgatcagcttcaagctgctggt 441 Query: 464 cacgctggtcgccgcccctgcgctggcgctggcgaccaaaagggcaaccgagggcgtccc 523 |||||||| || || || |||||||||||||||||||| ||||| || |||||||| || Sbjct: 442 gacgctggtggcggcgccggcgctggcgctggcgaccaagagggcgacggagggcgtgcc 501 Query: 524 cggcgtcggcaaggtagtgcacaaggtgcccaatgccatctacgcctccgccatcaccct 583 ||||||||||| ||| |||| |||||||||||| ||||||||||||||| ||||||||| Sbjct: 502 cggcgtcggcagggtggtgcgcaaggtgcccaactccatctacgcctccgtcatcaccct 561 Query: 584 ggccgccgtgctcatccagagatccgccgagggcgtcgagtaga 627 | || ||| | ||||| |||| |||||||||||||||||| Sbjct: 562 cggcgtcgtcatggcccagaaatccaccgagggcgtcgagtaga 605
>dbj|AK069777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026G02, full insert sequence Length = 795 Score = 460 bits (232), Expect = e-126 Identities = 451/524 (86%) Strand = Plus / Plus Query: 104 cgccatggggcaggtctgggcgtctctgcaagagaagctccaagggcggcactggaagga 163 |||||||||||| | |||||||||||| || || || ||||||||| |||| |||||||| Sbjct: 82 cgccatggggcaagcctgggcgtctctccaggataaactccaagggaggcaatggaagga 141 Query: 164 gaggcaggtgcggaagatcaccgacaaggtgttcgaccggctcacagaggacacgcagag 223 || ||||||| |||||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 142 gaagcaggtgaggaagatcacggacaaggtgttcgaccgcctcaccgaggacaccaagaa 201 Query: 224 gcgcgagaaggaggccctccagttcgaggaggtctacatcgccgtcctctgcgtctacaa 283 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 202 gcgcgagcaggaggccctcaccttcgaggaggtctacatcgccgtcctctgcgtctacaa 261 Query: 284 cgacatcaacaagtacttgccggggccgcactacgaccccccgtccaaggagaggctcaa 343 |||||||||||||||||| || ||||||||||| || || || |||||||||| |||||| Sbjct: 262 cgacatcaacaagtacttaccagggccgcactatgatccgccctccaaggagaagctcaa 321 Query: 344 ggctctcatgaatgagtttgacattgacatgaacggtctcctggaccgtgaggagtttgc 403 ||| | |||||||||| ||||| || || |||| ||||||||||| |||||||| || Sbjct: 322 ggccatgatgaatgagtacgacatcaacctggacgggctcctggaccgggaggagttcgc 381 Query: 404 ggagttcatccggaagctgaccgccgagtcactctgtgcgatcagcctcaagctgatcat 463 ||||||||||||||||||||| || ||||| || || ||||||||| |||||||| | | Sbjct: 382 ggagttcatccggaagctgacggcggagtcgctgtgcgcgatcagcttcaagctgctggt 441 Query: 464 cacgctggtcgccgcccctgcgctggcgctggcgaccaaaagggcaaccgagggcgtccc 523 |||||||| || || || |||||||||||||||||||| ||||| || |||||||| || Sbjct: 442 gacgctggtggcggcgccggcgctggcgctggcgaccaagagggcgacggagggcgtgcc 501 Query: 524 cggcgtcggcaaggtagtgcacaaggtgcccaatgccatctacgcctccgccatcaccct 583 ||||||||||| ||| |||| |||||||||||| ||||||||||||||| ||||||||| Sbjct: 502 cggcgtcggcagggtggtgcgcaaggtgcccaactccatctacgcctccgtcatcaccct 561 Query: 584 ggccgccgtgctcatccagagatccgccgagggcgtcgagtaga 627 | || ||| | ||||| |||| |||||||||||||||||| Sbjct: 562 cggcgtcgtcatggcccagaaatccaccgagggcgtcgagtaga 605
>gb|AY106925.1| Zea mays PCO125905 mRNA sequence Length = 787 Score = 414 bits (209), Expect = e-112 Identities = 416/485 (85%) Strand = Plus / Plus Query: 140 gctccaagggcggcactggaaggagaggcaggtgcggaagatcaccgacaaggtgttcga 199 |||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 52 gctccaagggcggcggtggaaggagcaccaggtgaggaagatcaccgacaaggtgttcga 111 Query: 200 ccggctcacagaggacacgcagaggcgcgagaaggaggccctccagttcgaggaggtcta 259 ||| ||||| |||||| | |||| |||||| |||||||||||| |||||||||||||| Sbjct: 112 ccgcctcacggaggacgcccagaagcgcgacaaggaggccctcagattcgaggaggtcta 171 Query: 260 catcgccgtcctctgcgtctacaacgacatcaacaagtacttgccggggccgcactacga 319 |||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||| Sbjct: 172 catcgccgtcctctgcgtctacaatgacatcaataagtacttgccggggccgcaccacga 231 Query: 320 ccccccgtccaaggagaggctcaaggctctcatgaatgagtttgacattgacatgaacgg 379 ||||||||||||||||| ||||| ||| | ||| | |||| ||| | || || |||| Sbjct: 232 ccccccgtccaaggagaagctcagggccatgatggaggagtacgacgtgaacctggacgg 291 Query: 380 tctcctggaccgtgaggagtttgcggagttcatccggaagctgaccgccgagtcactctg 439 ||||||||||| |||||||| |||||||||||||||||||||||||| || || || || Sbjct: 292 gctcctggaccgcgaggagttcgcggagttcatccggaagctgaccgcggactcgctgtg 351 Query: 440 tgcgatcagcctcaagctgatcatcacgctggtcgccgcccctgcgctggcgctggcgac 499 |||||||| | |||||| | ||||||||||| || || || ||||||||| ||||||| Sbjct: 352 ctcgatcagcgtgaagctgctgatcacgctggtggcggcgccggcgctggcgatggcgac 411 Query: 500 caaaagggcaaccgagggcgtccccggcgtcggcaaggtagtgcacaaggtgcccaatgc 559 ||| |||| || ||||||||||||||||| |||||||| || | |||||||||||| || Sbjct: 412 caagcgggcgacggagggcgtccccggcgtgggcaaggtggtacgcaaggtgcccaacgc 471 Query: 560 catctacgcctccgccatcaccctggccgccgtgctcatccagagatccgccgagggcgt 619 |||||||||||||||||||||||| || ||||| | |||||||| |||||||||| Sbjct: 472 gctctacgcctccgccatcaccctgggcgttgtgctgttgcagagatcaaccgagggcgt 531 Query: 620 cgagt 624 ||||| Sbjct: 532 cgagt 536
>emb|CT834526.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN035A07, full insert sequence Length = 1560 Score = 268 bits (135), Expect = 3e-68 Identities = 216/243 (88%) Strand = Plus / Plus Query: 104 cgccatggggcaggtctgggcgtctctgcaagagaagctccaagggcggcactggaagga 163 |||||||||||| | |||||||||||| || || || ||||||||| |||| |||||||| Sbjct: 78 cgccatggggcaagcctgggcgtctctccaggataaactccaagggaggcaatggaagga 137 Query: 164 gaggcaggtgcggaagatcaccgacaaggtgttcgaccggctcacagaggacacgcagag 223 || ||||||| |||||||||| ||||||||||||||||| ||||| |||||||| ||| Sbjct: 138 gaagcaggtgaggaagatcacggacaaggtgttcgaccgcctcaccgaggacaccaagaa 197 Query: 224 gcgcgagaaggaggccctccagttcgaggaggtctacatcgccgtcctctgcgtctacaa 283 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 198 gcgcgagcaggaggccctcaccttcgaggaggtctacatcgccgtcctctgcgtctacaa 257 Query: 284 cgacatcaacaagtacttgccggggccgcactacgaccccccgtccaaggagaggctcaa 343 |||||||||||||||||| || ||||||||||| || || || |||||||||| |||||| Sbjct: 258 cgacatcaacaagtacttaccagggccgcactatgatccgccctccaaggagaagctcaa 317 Query: 344 ggc 346 ||| Sbjct: 318 ggc 320 Score = 206 bits (104), Expect = 1e-49 Identities = 215/252 (85%) Strand = Plus / Plus Query: 376 acggtctcctggaccgtgaggagtttgcggagttcatccggaagctgaccgccgagtcac 435 |||| ||||||||||| |||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 982 acgggctcctggaccgggaggagttcgcggagttcatccggaagctgacggcggagtcgc 1041 Query: 436 tctgtgcgatcagcctcaagctgatcatcacgctggtcgccgcccctgcgctggcgctgg 495 | || ||||||||| |||||||| | | |||||||| || || || ||||||||||||| Sbjct: 1042 tgtgcgcgatcagcttcaagctgctggtgacgctggtggcggcgccggcgctggcgctgg 1101 Query: 496 cgaccaaaagggcaaccgagggcgtccccggcgtcggcaaggtagtgcacaaggtgccca 555 ||||||| ||||| || |||||||| ||||||||||||| ||| |||| ||||||||||| Sbjct: 1102 cgaccaagagggcgacggagggcgtgcccggcgtcggcagggtggtgcgcaaggtgccca 1161 Query: 556 atgccatctacgcctccgccatcaccctggccgccgtgctcatccagagatccgccgagg 615 | ||||||||||||||| ||||||||| | || ||| | ||||| |||| |||||| Sbjct: 1162 actccatctacgcctccgtcatcaccctcggcgtcgtcatggcccagaaatccaccgagg 1221 Query: 616 gcgtcgagtaga 627 |||||||||||| Sbjct: 1222 gcgtcgagtaga 1233
>emb|CR855228.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0403H10-OSIGBa0105A11, complete sequence Length = 142564 Score = 206 bits (104), Expect = 1e-49 Identities = 215/252 (85%) Strand = Plus / Minus Query: 376 acggtctcctggaccgtgaggagtttgcggagttcatccggaagctgaccgccgagtcac 435 |||| ||||||||||| |||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 63006 acgggctcctggaccgggaggagttcgcggagttcatccggaagctgacggcggagtcgc 62947 Query: 436 tctgtgcgatcagcctcaagctgatcatcacgctggtcgccgcccctgcgctggcgctgg 495 | || ||||||||| |||||||| | | |||||||| || || || ||||||||||||| Sbjct: 62946 tgtgcgcgatcagcttcaagctgctggtgacgctggtggcggcgccggcgctggcgctgg 62887 Query: 496 cgaccaaaagggcaaccgagggcgtccccggcgtcggcaaggtagtgcacaaggtgccca 555 ||||||| ||||| || |||||||| ||||||||||||| ||| |||| ||||||||||| Sbjct: 62886 cgaccaagagggcgacggagggcgtgcccggcgtcggcagggtggtgcgcaaggtgccca 62827 Query: 556 atgccatctacgcctccgccatcaccctggccgccgtgctcatccagagatccgccgagg 615 | ||||||||||||||| ||||||||| | || ||| | ||||| |||| |||||| Sbjct: 62826 actccatctacgcctccgtcatcaccctcggcgtcgtcatggcccagaaatccaccgagg 62767 Query: 616 gcgtcgagtaga 627 |||||||||||| Sbjct: 62766 gcgtcgagtaga 62755 Score = 163 bits (82), Expect = 1e-36 Identities = 124/138 (89%) Strand = Plus / Minus Query: 146 agggcggcactggaaggagaggcaggtgcggaagatcaccgacaaggtgttcgaccggct 205 |||| |||| |||||||||| ||||||| |||||||||| ||||||||||||||||| || Sbjct: 63960 agggaggcaatggaaggagaagcaggtgaggaagatcacggacaaggtgttcgaccgcct 63901 Query: 206 cacagaggacacgcagaggcgcgagaaggaggccctccagttcgaggaggtctacatcgc 265 ||| |||||||| ||| ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 63900 caccgaggacaccaagaagcgcgagcaggaggccctcaccttcgaggaggtctacatcgc 63841 Query: 266 cgtcctctgcgtctacaa 283 |||||||||||||||||| Sbjct: 63840 cgtcctctgcgtctacaa 63823 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 284 cgacatcaacaagtacttgccggggccgcactacgaccccccgtccaaggagaggctcaa 343 |||||||||||||||||| || ||||||||||| || || || |||||||||| |||||| Sbjct: 63730 cgacatcaacaagtacttaccagggccgcactatgatccgccctccaaggagaagctcaa 63671 Query: 344 ggc 346 ||| Sbjct: 63670 ggc 63668 Score = 42.1 bits (21), Expect = 3.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 104 cgccatggggcaggtctgggcgtctctgcaagagaagctccaagg 148 |||||||||||| | |||||||||||| || || || |||||||| Sbjct: 64117 cgccatggggcaagcctgggcgtctctccaggataaactccaagg 64073
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 206 bits (104), Expect = 1e-49 Identities = 215/252 (85%) Strand = Plus / Minus Query: 376 acggtctcctggaccgtgaggagtttgcggagttcatccggaagctgaccgccgagtcac 435 |||| ||||||||||| |||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 30396462 acgggctcctggaccgggaggagttcgcggagttcatccggaagctgacggcggagtcgc 30396403 Query: 436 tctgtgcgatcagcctcaagctgatcatcacgctggtcgccgcccctgcgctggcgctgg 495 | || ||||||||| |||||||| | | |||||||| || || || ||||||||||||| Sbjct: 30396402 tgtgcgcgatcagcttcaagctgctggtgacgctggtggcggcgccggcgctggcgctgg 30396343 Query: 496 cgaccaaaagggcaaccgagggcgtccccggcgtcggcaaggtagtgcacaaggtgccca 555 ||||||| ||||| || |||||||| ||||||||||||| ||| |||| ||||||||||| Sbjct: 30396342 cgaccaagagggcgacggagggcgtgcccggcgtcggcagggtggtgcgcaaggtgccca 30396283 Query: 556 atgccatctacgcctccgccatcaccctggccgccgtgctcatccagagatccgccgagg 615 | ||||||||||||||| ||||||||| | || ||| | ||||| |||| |||||| Sbjct: 30396282 actccatctacgcctccgtcatcaccctcggcgtcgtcatggcccagaaatccaccgagg 30396223 Query: 616 gcgtcgagtaga 627 |||||||||||| Sbjct: 30396222 gcgtcgagtaga 30396211 Score = 163 bits (82), Expect = 1e-36 Identities = 124/138 (89%) Strand = Plus / Minus Query: 146 agggcggcactggaaggagaggcaggtgcggaagatcaccgacaaggtgttcgaccggct 205 |||| |||| |||||||||| ||||||| |||||||||| ||||||||||||||||| || Sbjct: 30397416 agggaggcaatggaaggagaagcaggtgaggaagatcacggacaaggtgttcgaccgcct 30397357 Query: 206 cacagaggacacgcagaggcgcgagaaggaggccctccagttcgaggaggtctacatcgc 265 ||| |||||||| ||| ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 30397356 caccgaggacaccaagaagcgcgagcaggaggccctcaccttcgaggaggtctacatcgc 30397297 Query: 266 cgtcctctgcgtctacaa 283 |||||||||||||||||| Sbjct: 30397296 cgtcctctgcgtctacaa 30397279 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 284 cgacatcaacaagtacttgccggggccgcactacgaccccccgtccaaggagaggctcaa 343 |||||||||||||||||| || ||||||||||| || || || |||||||||| |||||| Sbjct: 30397186 cgacatcaacaagtacttaccagggccgcactatgatccgccctccaaggagaagctcaa 30397127 Query: 344 ggc 346 ||| Sbjct: 30397126 ggc 30397124 Score = 42.1 bits (21), Expect = 3.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 104 cgccatggggcaggtctgggcgtctctgcaagagaagctccaagg 148 |||||||||||| | |||||||||||| || || || |||||||| Sbjct: 30397573 cgccatggggcaagcctgggcgtctctccaggataaactccaagg 30397529
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 206 bits (104), Expect = 1e-49 Identities = 215/252 (85%) Strand = Plus / Minus Query: 376 acggtctcctggaccgtgaggagtttgcggagttcatccggaagctgaccgccgagtcac 435 |||| ||||||||||| |||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 29840 acgggctcctggaccgggaggagttcgcggagttcatccggaagctgacggcggagtcgc 29781 Query: 436 tctgtgcgatcagcctcaagctgatcatcacgctggtcgccgcccctgcgctggcgctgg 495 | || ||||||||| |||||||| | | |||||||| || || || ||||||||||||| Sbjct: 29780 tgtgcgcgatcagcttcaagctgctggtgacgctggtggcggcgccggcgctggcgctgg 29721 Query: 496 cgaccaaaagggcaaccgagggcgtccccggcgtcggcaaggtagtgcacaaggtgccca 555 ||||||| ||||| || |||||||| ||||||||||||| ||| |||| ||||||||||| Sbjct: 29720 cgaccaagagggcgacggagggcgtgcccggcgtcggcagggtggtgcgcaaggtgccca 29661 Query: 556 atgccatctacgcctccgccatcaccctggccgccgtgctcatccagagatccgccgagg 615 | ||||||||||||||| ||||||||| | || ||| | ||||| |||| |||||| Sbjct: 29660 actccatctacgcctccgtcatcaccctcggcgtcgtcatggcccagaaatccaccgagg 29601 Query: 616 gcgtcgagtaga 627 |||||||||||| Sbjct: 29600 gcgtcgagtaga 29589 Score = 163 bits (82), Expect = 1e-36 Identities = 124/138 (89%) Strand = Plus / Minus Query: 146 agggcggcactggaaggagaggcaggtgcggaagatcaccgacaaggtgttcgaccggct 205 |||| |||| |||||||||| ||||||| |||||||||| ||||||||||||||||| || Sbjct: 30794 agggaggcaatggaaggagaagcaggtgaggaagatcacggacaaggtgttcgaccgcct 30735 Query: 206 cacagaggacacgcagaggcgcgagaaggaggccctccagttcgaggaggtctacatcgc 265 ||| |||||||| ||| ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 30734 caccgaggacaccaagaagcgcgagcaggaggccctcaccttcgaggaggtctacatcgc 30675 Query: 266 cgtcctctgcgtctacaa 283 |||||||||||||||||| Sbjct: 30674 cgtcctctgcgtctacaa 30657 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 284 cgacatcaacaagtacttgccggggccgcactacgaccccccgtccaaggagaggctcaa 343 |||||||||||||||||| || ||||||||||| || || || |||||||||| |||||| Sbjct: 30564 cgacatcaacaagtacttaccagggccgcactatgatccgccctccaaggagaagctcaa 30505 Query: 344 ggc 346 ||| Sbjct: 30504 ggc 30502 Score = 42.1 bits (21), Expect = 3.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 104 cgccatggggcaggtctgggcgtctctgcaagagaagctccaagg 148 |||||||||||| | |||||||||||| || || || |||||||| Sbjct: 30951 cgccatggggcaagcctgggcgtctctccaggataaactccaagg 30907
>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12, complete sequence Length = 160989 Score = 206 bits (104), Expect = 1e-49 Identities = 215/252 (85%) Strand = Plus / Minus Query: 376 acggtctcctggaccgtgaggagtttgcggagttcatccggaagctgaccgccgagtcac 435 |||| ||||||||||| |||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 146358 acgggctcctggaccgggaggagttcgcggagttcatccggaagctgacggcggagtcgc 146299 Query: 436 tctgtgcgatcagcctcaagctgatcatcacgctggtcgccgcccctgcgctggcgctgg 495 | || ||||||||| |||||||| | | |||||||| || || || ||||||||||||| Sbjct: 146298 tgtgcgcgatcagcttcaagctgctggtgacgctggtggcggcgccggcgctggcgctgg 146239 Query: 496 cgaccaaaagggcaaccgagggcgtccccggcgtcggcaaggtagtgcacaaggtgccca 555 ||||||| ||||| || |||||||| ||||||||||||| ||| |||| ||||||||||| Sbjct: 146238 cgaccaagagggcgacggagggcgtgcccggcgtcggcagggtggtgcgcaaggtgccca 146179 Query: 556 atgccatctacgcctccgccatcaccctggccgccgtgctcatccagagatccgccgagg 615 | ||||||||||||||| ||||||||| | || ||| | ||||| |||| |||||| Sbjct: 146178 actccatctacgcctccgtcatcaccctcggcgtcgtcatggcccagaaatccaccgagg 146119 Query: 616 gcgtcgagtaga 627 |||||||||||| Sbjct: 146118 gcgtcgagtaga 146107 Score = 163 bits (82), Expect = 1e-36 Identities = 124/138 (89%) Strand = Plus / Minus Query: 146 agggcggcactggaaggagaggcaggtgcggaagatcaccgacaaggtgttcgaccggct 205 |||| |||| |||||||||| ||||||| |||||||||| ||||||||||||||||| || Sbjct: 147312 agggaggcaatggaaggagaagcaggtgaggaagatcacggacaaggtgttcgaccgcct 147253 Query: 206 cacagaggacacgcagaggcgcgagaaggaggccctccagttcgaggaggtctacatcgc 265 ||| |||||||| ||| ||||||| ||||||||||| |||||||||||||||||||| Sbjct: 147252 caccgaggacaccaagaagcgcgagcaggaggccctcaccttcgaggaggtctacatcgc 147193 Query: 266 cgtcctctgcgtctacaa 283 |||||||||||||||||| Sbjct: 147192 cgtcctctgcgtctacaa 147175 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 284 cgacatcaacaagtacttgccggggccgcactacgaccccccgtccaaggagaggctcaa 343 |||||||||||||||||| || ||||||||||| || || || |||||||||| |||||| Sbjct: 147082 cgacatcaacaagtacttaccagggccgcactatgatccgccctccaaggagaagctcaa 147023 Query: 344 ggc 346 ||| Sbjct: 147022 ggc 147020 Score = 42.1 bits (21), Expect = 3.3 Identities = 39/45 (86%) Strand = Plus / Minus Query: 104 cgccatggggcaggtctgggcgtctctgcaagagaagctccaagg 148 |||||||||||| | |||||||||||| || || || |||||||| Sbjct: 147469 cgccatggggcaagcctgggcgtctctccaggataaactccaagg 147425
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 48.1 bits (24), Expect = 0.053 Identities = 24/24 (100%) Strand = Plus / Plus Query: 88 ctccgccgacgcccgacgccatgg 111 |||||||||||||||||||||||| Sbjct: 194736 ctccgccgacgcccgacgccatgg 194759
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 44.1 bits (22), Expect = 0.83 Identities = 25/26 (96%) Strand = Plus / Plus Query: 566 cgcctccgccatcaccctggccgccg 591 ||||||| |||||||||||||||||| Sbjct: 1053260 cgcctccaccatcaccctggccgccg 1053285
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 88 ctccgccgacgcccgacgcca 108 ||||||||||||||||||||| Sbjct: 3806229 ctccgccgacgcccgacgcca 3806249
>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12 Length = 323450 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 472 tcgccgcccctgcgctggcgc 492 ||||||||||||||||||||| Sbjct: 66907 tcgccgcccctgcgctggcgc 66927
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 447 agcctcaagctgatcatcacg 467 ||||||||||||||||||||| Sbjct: 1457307 agcctcaagctgatcatcacg 1457287
>ref|XM_651417.1| Entamoeba histolytica HM-1:IMSS dTDP-D-glucose 4,6-dehydratase, putative (11.t00065) partial mRNA Length = 1029 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 815 cttgacatgataaattcttga 835 ||||||||||||||||||||| Sbjct: 837 cttgacatgataaattcttga 817
>emb|X82541.1| A.nidulans sC gene for ATP sulphurylase Length = 3267 Score = 42.1 bits (21), Expect = 3.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 156 tggaaggagaggcaggtgcggaaga 180 |||||||||||| |||||||||||| Sbjct: 390 tggaaggagaggaaggtgcggaaga 366
>emb|BX276177.6| Zebrafish DNA sequence from clone CH211-223M11 in linkage group 20, complete sequence Length = 202340 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 679 tggggttgtaaatgtgatgtg 699 ||||||||||||||||||||| Sbjct: 10309 tggggttgtaaatgtgatgtg 10289
>gb|AC153771.3| Loxodonta africana clone VMRC15-435I22, complete sequence Length = 132352 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ctccagcctccgccgacgccc 101 ||||||||||||||||||||| Sbjct: 30875 ctccagcctccgccgacgccc 30895
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 3.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 ggcgtccccggcgtcggcaag 536 ||||||||||||||||||||| Sbjct: 2217116 ggcgtccccggcgtcggcaag 2217136 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 139,238,809 Number of extensions: 7415103 Number of successful extensions: 165512 Number of sequences better than 10.0: 18 Number of HSP's gapped: 165511 Number of HSP's successfully gapped: 39 Length of query: 874 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 852 Effective length of database: 18,508,616,841 Effective search space: 15769341548532 Effective search space used: 15769341548532 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
