ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf55c01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK064162:Os05g0487300 | 37 | 0.015 | 2 | AK062926:Os05g0487300 | 37 | 0.015 | 3 | AK062405:Os09g0412700 | 34 | 0.097 | 4 | Os12g0490000:Os12g0490000 | 33 | 0.13 | 5 | AK063855:Os07g0631300 | 31 | 0.63 | 6 | AK121388:Os01g0815400 | 30 | 1.1 | 7 | AK111773:Os04g0680800 | 30 | 1.1 | 8 | X88798:Os05g0597200 | 29 | 3.1 | 9 | AK105527:Os01g0169400 | 29 | 3.1 | 10 | AK064798:Os05g0597200 | 29 | 3.1 | 11 | AK066417:Os06g0274500 | 28 | 5.3 | 12 | Os03g0716200:Os03g0716200 | 28 | 7.0 | 13 | AK120702:Os04g0403200 | 27 | 9.1 |
|---|
>AK064162:Os05g0487300 | Length = 100 Score = 36.6 bits (83), Expect = 0.015 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 3/95 (3%) Frame = +1 Query: 46 RQMERLPALHLAVVTLLGFCCLIHASRAATSFPTAA---LRAQLQETEAILASSXXXXXX 216 R MER P +AV+ L C L+ +S P + L +Q Q+ L S Sbjct: 3 RAMERRPRDLVAVLALS--CLLLLLPLLVSSVPMSRSLHLSSQQQQHPPSLNLSPDEMAA 60 Query: 217 XXXXXXXXXXXSRRMEMEMELEDYPGSGPNDHHSP 321 + RM++E+ DYPGSGPN+ H P Sbjct: 61 AAAARGLGRRPAARMDVEVN--DYPGSGPNNRHDP 93
>AK062926:Os05g0487300 | Length = 100 Score = 36.6 bits (83), Expect = 0.015 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 3/95 (3%) Frame = +1 Query: 46 RQMERLPALHLAVVTLLGFCCLIHASRAATSFPTAA---LRAQLQETEAILASSXXXXXX 216 R MER P +AV+ L C L+ +S P + L +Q Q+ L S Sbjct: 3 RAMERRPRDLVAVLALS--CLLLLLPLLVSSVPMSRSLHLSSQQQQHPPSLNLSPDEMAA 60 Query: 217 XXXXXXXXXXXSRRMEMEMELEDYPGSGPNDHHSP 321 + RM++E+ DYPGSGPN+ H P Sbjct: 61 AAAARGLGRRPAARMDVEVN--DYPGSGPNNRHDP 93
>AK062405:Os09g0412700 | Length = 101 Score = 33.9 bits (76), Expect = 0.097 Identities = 29/97 (29%), Positives = 36/97 (37%), Gaps = 4/97 (4%) Frame = +1 Query: 43 MRQMERLPALHL--AVVTLLGFCCLIHASRAATSFPTAALRAQLQETEAILASSXXXXXX 216 M M + PAL L ++TLL F LI S A L Q ++ S Sbjct: 1 MHTMGKSPALPLYYLLITLLAFYFLIVPSNAIPLSRVQRLHLQESSEMPLVRGSTAKPKM 60 Query: 217 XXXXXXXXXXXSRRMEMEMELE--DYPGSGPNDHHSP 321 + M LE DY SGPN+HH P Sbjct: 61 EMERPVVALEEDAMINARMALETQDYAPSGPNNHHKP 97
>Os12g0490000:Os12g0490000 | Length = 365 Score = 33.5 bits (75), Expect = 0.13 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +1 Query: 250 SRRMEMEMELEDYPGSGPNDHHSP 321 +R M EL DYPGSG N+ HSP Sbjct: 336 TRSGSMGFELNDYPGSGANNRHSP 359
>AK063855:Os07g0631300 | Length = 95 Score = 31.2 bits (69), Expect = 0.63 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +1 Query: 265 MEMELEDYPGSGPNDHHSP 321 M ++ DYP SGPND H+P Sbjct: 72 MALQTTDYPPSGPNDRHTP 90
>AK121388:Os01g0815400 | Length = 97 Score = 30.4 bits (67), Expect = 1.1 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +1 Query: 265 MEMELEDYPGSGPNDHHSP 321 M +E+ DYPGSG N+ H P Sbjct: 73 MVIEVNDYPGSGANNRHDP 91
>AK111773:Os04g0680800 | Length = 326 Score = 30.4 bits (67), Expect = 1.1 Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Frame = -3 Query: 160 PSGPQLGMKLQPLKHG*GSRSRAGSPL-PGAV-----QAISPSVSSEAFLQ 26 PS P L ++LQPL+ G GS +R G+P PG V ++S SS LQ Sbjct: 222 PSRPYLKIQLQPLRSGGGS-ARPGTPCHPGVVGLPPLHSVSTQGSSHPMLQ 271
>X88798:Os05g0597200 | Length = 538 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -3 Query: 190 PGLPRSPAAAPSGPQLGMKLQPLKHG*GSRSRAGSPL 80 PG PR AAA + P PLK G G + +PL Sbjct: 230 PGRPRKNAAAAASPVAPPPASPLKRGVGRPRKNATPL 266
>AK105527:Os01g0169400 | Length = 251 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%) Frame = +3 Query: 60 IACTAPGSGDP--ARLLLPHPCFKGCNFIPNCGPE 158 +A T PG+G P A L C GC F P PE Sbjct: 20 VATTTPGAGSPCAACKFLRRKCLPGCVFAPYFPPE 54
>AK064798:Os05g0597200 | Length = 517 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = -3 Query: 190 PGLPRSPAAAPSGPQLGMKLQPLKHG*GSRSRAGSPL 80 PG PR AAA + P PLK G G + +PL Sbjct: 209 PGRPRKNAAAAASPVAPPPASPLKRGVGRPRKNATPL 245
>AK066417:Os06g0274500 | Length = 640 Score = 28.1 bits (61), Expect = 5.3 Identities = 9/13 (69%), Positives = 12/13 (92%) Frame = -2 Query: 650 FFFFWRHKRNKQI 612 F F+WRH+RN+QI Sbjct: 260 FLFWWRHRRNRQI 272
>Os03g0716200:Os03g0716200 | Length = 872 Score = 27.7 bits (60), Expect = 7.0 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = -2 Query: 350 SQFLLSCRHHGEWWSLGPE 294 +Q +L C+H +WW LG E Sbjct: 685 AQAVLDCKHWVKWWGLGDE 703
>AK120702:Os04g0403200 | Length = 347 Score = 27.3 bits (59), Expect = 9.1 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = +3 Query: 33 NASDETDGEIACTAPGSGDPARLLLP--HPCF-KGCNFIPNCGPEGAA 167 +A+ +T C A G+G+ + LLLP H C +GC + P AA Sbjct: 289 DAASKTPAAALCKACGAGEASMLLLPCRHLCLCRGCEAAVDACPVCAA 336 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,831,298 Number of extensions: 353182 Number of successful extensions: 1146 Number of sequences better than 10.0: 13 Number of HSP's gapped: 1146 Number of HSP's successfully gapped: 13 Length of query: 217 Length of database: 15,399,855 Length adjustment: 97 Effective length of query: 120 Effective length of database: 11,515,878 Effective search space: 1381905360 Effective search space used: 1381905360 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
