ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf55b16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001064806.1| Oryza sativa (japonica cultivar-group) Os06g... 396 e-107
2dbj|AK058614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 396 e-107
3dbj|AK121998.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-104
4gb|AY105388.1| Zea mays PCO119060 mRNA sequence 341 4e-90
5gb|BT017210.1| Zea mays clone EL01N0372B05.c mRNA sequence 337 6e-89
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 145 4e-31
7dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic D... 145 4e-31
8emb|CT987277.1| partial cDNA sequence from a Lambda ZAP II norma... 68 8e-08
9emb|CT984949.1| partial cDNA sequence from a Lambda ZAP II norma... 68 8e-08
10emb|CT981459.1| partial cDNA sequence from a Lambda ZAP II norma... 68 8e-08
11emb|CT981185.1| partial cDNA sequence from a Lambda ZAP II norma... 68 8e-08
12ref|NM_120590.1| Arabidopsis thaliana ubiquitin conjugating enzy... 64 1e-06
13gb|BT012849.1| Lycopersicon esculentum clone 113927F, mRNA sequence 64 1e-06
14gb|AY116948.1| Arabidopsis thaliana AT5g05080/MUG13_6 mRNA, comp... 64 1e-06
15gb|AF428320.1|AF428320 Arabidopsis thaliana AT5g05080/MUG13_6 mR... 64 1e-06
16gb|AY088106.1| Arabidopsis thaliana clone 41386 mRNA, complete s... 64 1e-06
17dbj|AB005245.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 64 1e-06
18emb|BX830232.1|CNS0A1DN Arabidopsis thaliana Full-length cDNA Co... 64 1e-06
19gb|DQ027036.1| Arabidopsis thaliana ubiquitinating enzyme (At5g0... 64 1e-06
20gb|AY112182.1| Zea mays CL10959_2 mRNA sequence 46 0.29
21ref|XM_966393.1| PREDICTED: Tribolium castaneum similar to CG818... 44 1.2
22emb|BX510652.6| Zebrafish DNA sequence from clone CH211-107N23 i... 44 1.2
23emb|AL845324.16| Zebrafish DNA sequence from clone CH211-122L14 ... 44 1.2
24gb|AC185978.2| Pan troglodytes BAC clone CH251-508B17 from chrom... 42 4.6
25gb|BC106514.1| Xenopus laevis hypothetical protein LOC733371, mR... 42 4.6
26gb|AE017308.1| Mycoplasma mobile 163K complete genome 42 4.6
27gb|AC149669.2| Bos taurus BAC CH240-57J21 (Children's Hospital ... 42 4.6
28gb|U55370.1| Caenorhabditis elegans cosmid K03B4, complete sequence 42 4.6
29dbj|AP007292.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 4.6
30emb|CR753899.5| Zebrafish DNA sequence from clone DKEY-267F18 in... 42 4.6
31emb|BX649468.12| Zebrafish DNA sequence from clone CH211-152C2 i... 42 4.6
32gb|AC074378.4| Homo sapiens BAC clone RP11-4I17 from 4, complete... 42 4.6
33gb|AC140484.1| Homo sapiens BAC clone RP11-806A6 from 4, complet... 42 4.6
34dbj|AP006120.1| Lotus japonicus genomic DNA, chromosome 2, clone... 42 4.6
35gb|DQ288936.1| Globodera pallida clone sc4ap4p311 unknown mitoch... 42 4.6
36gb|DQ288935.1| Globodera pallida clone sc4ap4p310 unknown mitoch... 42 4.6
37gb|DQ288933.1| Globodera pallida clone sc4ap4p29 unknown mitocho... 42 4.6
38gb|DQ288931.1| Globodera pallida clone sc4ap4p22 unknown mitocho... 42 4.6
39gb|DQ288928.1| Globodera pallida clone sc4agou4 unknown mitochon... 42 4.6 
>ref|NM_001064806.1| Oryza sativa (japonica cultivar-group) Os06g0660700 (Os06g0660700)
           mRNA, complete cds
          Length = 1380
 Score =  396 bits (200), Expect = e-107
 Identities = 440/520 (84%)
 Strand = Plus / Plus

                                                                       
Query: 229 ttgcttgcatggcaaccaacgaaaacctcccaccaaatgtcattaggcaattggctaaag 288
           |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 406 ttgcttccatggcaaccaacgagaacctcccaccaaatgtcgttaggcaattggctaagg 465

                                                                       
Query: 289 aattgaagaatcttgaccagtcacctccagaagggataagagtgattgtgaatgacgatg 348
           || |||||| ||||||  ||||||||||||||||||| | ||| ||||| ||||||||||
Sbjct: 466 aactgaagagtcttgatgagtcacctccagaagggattaaagttattgttaatgacgatg 525

                                                                       
Query: 349 acttcacaagtatttgtgcagatatagatggccctggtgggactccgtacgagaatgggg 408
           ||||||| |  |||| ||| ||||| || || |||| ||| ||||| || |||||||| |
Sbjct: 526 acttcaccaccatttttgctgatattgagggacctgctggaactccatatgagaatggag 585

                                                                       
Query: 409 ttttccggatgaagctagtcttgtcccgtgacttccctcaatccccaccgaaaggatttt 468
           | ||||| ||||||||| | ||||| |||||||||||||| || || || |||||||| |
Sbjct: 586 tattccgtatgaagctattgttgtctcgtgacttccctcagtctcctcctaaaggattct 645

                                                                       
Query: 469 ttgtgactaaaatattccatccaaacatatcaagcaatggtgagatctgtgttaacacgt 528
           |  |||| ||||| ||||||||||| ||| |||  | |||||| || |||||||||||  
Sbjct: 646 tcttgacaaaaattttccatccaaatatagcaactagtggtgaaatatgtgttaacacac 705

                                                                       
Query: 529 tgaaaaaggattggaatcctactcatggattaaggcatgttctactggtggtgagatgcc 588
           |||| ||||||||||||||||  | ||||||||| |||||||| ||||| ||||||||||
Sbjct: 706 tgaagaaggattggaatcctagccttggattaagacatgttctgctggtagtgagatgcc 765

                                                                       
Query: 589 tgctgattgaaccattcccagaatctgcgctcaatgagcaggctggaaagatgttacttg 648
           | ||||| |||||||| || |||||||| || |||||||| ||||| ||  |||| ||||
Sbjct: 766 ttctgatagaaccatttcctgaatctgcccttaatgagcaagctgggaaattgttgcttg 825

                                                                       
Query: 649 agaactatgcggactatgcacggcatgcaaggttatacacgagcattcatgccctcaaac 708
           ||||||||| ||| |||||||||||||||||| ||||||| ||||| ||||| || ||||
Sbjct: 826 agaactatgaggagtatgcacggcatgcaaggctatacactagcatccatgcacttaaac 885

                                                   
Query: 709 ctaagagtaagcccaagagtggcactatctctgagtcaac 748
           | |||| |||| ||||||| || ||||| ||||| |||||
Sbjct: 886 ccaagaataagaccaagagcgggactatttctgaatcaac 925



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                   
Query: 930  aagaagaagatggacgcgaggaagaagagcttgaagaga 968
            ||||||||||| || ||||||||||||||||||||||||
Sbjct: 1128 aagaagaagattgatgcgaggaagaagagcttgaagaga 1166
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>dbj|AK058614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-B01, full
           insert sequence
          Length = 1380

 Score =  396 bits (200), Expect = e-107
 Identities = 440/520 (84%)
 Strand = Plus / Plus

                                                                       
Query: 229 ttgcttgcatggcaaccaacgaaaacctcccaccaaatgtcattaggcaattggctaaag 288
           |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 406 ttgcttccatggcaaccaacgagaacctcccaccaaatgtcgttaggcaattggctaagg 465

                                                                       
Query: 289 aattgaagaatcttgaccagtcacctccagaagggataagagtgattgtgaatgacgatg 348
           || |||||| ||||||  ||||||||||||||||||| | ||| ||||| ||||||||||
Sbjct: 466 aactgaagagtcttgatgagtcacctccagaagggattaaagttattgttaatgacgatg 525

                                                                       
Query: 349 acttcacaagtatttgtgcagatatagatggccctggtgggactccgtacgagaatgggg 408
           ||||||| |  |||| ||| ||||| || || |||| ||| ||||| || ||||||||||
Sbjct: 526 acttcaccaccatttttgctgatattgagggacctgctggaactccatatgagaatgggg 585

                                                                       
Query: 409 ttttccggatgaagctagtcttgtcccgtgacttccctcaatccccaccgaaaggatttt 468
           | ||||| ||||||||| | ||||| ||||||| |||||| || || || |||||||| |
Sbjct: 586 tattccgtatgaagctattgttgtctcgtgactcccctcagtctcctcctaaaggattct 645

                                                                       
Query: 469 ttgtgactaaaatattccatccaaacatatcaagcaatggtgagatctgtgttaacacgt 528
           |  |||| ||||| ||||||||||| ||| |||  | |||||| || |||||||||||  
Sbjct: 646 tcttgacaaaaattttccatccaaatatagcaactagtggtgaaatatgtgttaacacac 705

                                                                       
Query: 529 tgaaaaaggattggaatcctactcatggattaaggcatgttctactggtggtgagatgcc 588
           |||| ||||||||||||||||  | ||||||||| |||||||| ||||| ||||||||||
Sbjct: 706 tgaagaaggattggaatcctagccttggattaagacatgttctgctggtagtgagatgcc 765

                                                                       
Query: 589 tgctgattgaaccattcccagaatctgcgctcaatgagcaggctggaaagatgttacttg 648
           | ||||| |||||||| || |||||||| || |||||||| ||||| ||  |||| ||||
Sbjct: 766 ttctgatagaaccatttcctgaatctgcccttaatgagcaagctgggaaattgttgcttg 825

                                                                       
Query: 649 agaactatgcggactatgcacggcatgcaaggttatacacgagcattcatgccctcaaac 708
           ||||||||| ||| |||||||||||||||||| ||||||| ||||| ||||| || ||||
Sbjct: 826 agaactatgaggagtatgcacggcatgcaaggctatacactagcatccatgcacttaaac 885

                                                   
Query: 709 ctaagagtaagcccaagagtggcactatctctgagtcaac 748
           | |||| |||| ||||||| || ||||| ||||| |||||
Sbjct: 886 ccaagaataagaccaagagcgggactatttctgaatcaac 925



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                   
Query: 930  aagaagaagatggacgcgaggaagaagagcttgaagaga 968
            ||||||||||| || ||||||||||||||||||||||||
Sbjct: 1128 aagaagaagattgatgcgaggaagaagagcttgaagaga 1166
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>dbj|AK121998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033110E10, full
           insert sequence
          Length = 1343

 Score =  389 bits (196), Expect = e-104
 Identities = 439/520 (84%)
 Strand = Plus / Plus

                                                                       
Query: 229 ttgcttgcatggcaaccaacgaaaacctcccaccaaatgtcattaggcaattggctaaag 288
           |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| |
Sbjct: 369 ttgcttccatggcaaccaacgagaacctcccaccaaatgtcgttaggcaattggctaagg 428

                                                                       
Query: 289 aattgaagaatcttgaccagtcacctccagaagggataagagtgattgtgaatgacgatg 348
           || |||||| ||||||   |||||||||||||||||| | ||| ||||| ||||||||||
Sbjct: 429 aactgaagagtcttgatgggtcacctccagaagggattaaagttattgttaatgacgatg 488

                                                                       
Query: 349 acttcacaagtatttgtgcagatatagatggccctggtgggactccgtacgagaatgggg 408
           ||||||| |  |||| ||| ||||| || || |||| ||| ||||| || |||||||| |
Sbjct: 489 acttcaccaccatttttgctgatattgagggacctgctggaactccatatgagaatggag 548

                                                                       
Query: 409 ttttccggatgaagctagtcttgtcccgtgacttccctcaatccccaccgaaaggatttt 468
           | ||||| ||||||||| | ||||| |||||||||||||| || || || |||||||| |
Sbjct: 549 tattccgtatgaagctattgttgtctcgtgacttccctcagtctcctcctaaaggattct 608

                                                                       
Query: 469 ttgtgactaaaatattccatccaaacatatcaagcaatggtgagatctgtgttaacacgt 528
           |  |||| ||||| ||||||||||| ||| |||  | |||||| || |||||||||||  
Sbjct: 609 tcttgacaaaaattttccatccaaatatagcaactagtggtgaaatatgtgttaacacac 668

                                                                       
Query: 529 tgaaaaaggattggaatcctactcatggattaaggcatgttctactggtggtgagatgcc 588
           |||| ||||||||||||||||  | ||||||||| |||||||| ||||| ||||||||||
Sbjct: 669 tgaagaaggattggaatcctagccttggattaagacatgttctgctggtagtgagatgcc 728

                                                                       
Query: 589 tgctgattgaaccattcccagaatctgcgctcaatgagcaggctggaaagatgttacttg 648
           | ||||| |||||||| || |||||||| || |||||||| ||||| ||  |||| ||||
Sbjct: 729 ttctgatagaaccatttcctgaatctgcccttaatgagcaagctgggaaattgttgcttg 788

                                                                       
Query: 649 agaactatgcggactatgcacggcatgcaaggttatacacgagcattcatgccctcaaac 708
           ||||||||| ||| |||||||||||||||||| ||||||| ||||| ||||| || ||||
Sbjct: 789 agaactatgaggagtatgcacggcatgcaaggctatacactagcatccatgcacttaaac 848

                                                   
Query: 709 ctaagagtaagcccaagagtggcactatctctgagtcaac 748
           | |||| |||| ||||||| || ||||| ||||| |||||
Sbjct: 849 ccaagaataagaccaagagcgggactatttctgaatcaac 888



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                   
Query: 930  aagaagaagatggacgcgaggaagaagagcttgaagaga 968
            ||||||||||| || ||||||||||||||||||||||||
Sbjct: 1091 aagaagaagattgatgcgaggaagaagagcttgaagaga 1129
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>gb|AY105388.1| Zea mays PCO119060 mRNA sequence
          Length = 1031

 Score =  341 bits (172), Expect = 4e-90
 Identities = 433/520 (83%)
 Strand = Plus / Plus

                                                                       
Query: 229 ttgcttgcatggcaaccaacgaaaacctcccaccaaatgtcattaggcaattggctaaag 288
           |||||| ||||||||| || || |||||||| ||||||||||| | ||||||||||||||
Sbjct: 372 ttgcttccatggcaactaatgagaacctcccgccaaatgtcatcaagcaattggctaaag 431

                                                                       
Query: 289 aattgaagaatcttgaccagtcacctccagaagggataagagtgattgtgaatgacgatg 348
           || ||||||| |||||  ||||||||||||||||||| |  |||||||| ||||| ||||
Sbjct: 432 aactgaagaaccttgatgagtcacctccagaagggattaatgtgattgtcaatgatgatg 491

                                                                       
Query: 349 acttcacaagtatttgtgcagatatagatggccctggtgggactccgtacgagaatgggg 408
           ||||||| | ||||| ||| || || || ||||||| ||| ||||| || ||||| || |
Sbjct: 492 acttcactactatttttgctgacattgaaggccctgctggaactccatatgagaacggag 551

                                                                       
Query: 409 ttttccggatgaagctagtcttgtcccgtgacttccctcaatccccaccgaaaggatttt 468
           | ||| ||||||||||| | ||||| || || ||||||||||| || || ||||| || |
Sbjct: 552 tattcaggatgaagctattattgtcacgcgatttccctcaatctcccccaaaagggttct 611

                                                                       
Query: 469 ttgtgactaaaatattccatccaaacatatcaagcaatggtgagatctgtgttaacacgt 528
           |  |||||||||| |||||||| |||||| | |  | ||||||||| ||||| |||||  
Sbjct: 612 tcttgactaaaattttccatcctaacatagctactagtggtgagatatgtgtaaacacac 671

                                                                       
Query: 529 tgaaaaaggattggaatcctactcatggattaaggcatgttctactggtggtgagatgcc 588
           |||| |||||||||||||||   | ||||||||| |||||||| ||||| ||||||||||
Sbjct: 672 tgaagaaggattggaatcctggccttggattaagacatgttcttctggttgtgagatgcc 731

                                                                       
Query: 589 tgctgattgaaccattcccagaatctgcgctcaatgagcaggctggaaagatgttacttg 648
           | |||||||||||||| || |||||||| || ||||| || ||||| |||||||||||||
Sbjct: 732 ttctgattgaaccatttcctgaatctgcacttaatgaacaagctgggaagatgttacttg 791

                                                                       
Query: 649 agaactatgcggactatgcacggcatgcaaggttatacacgagcattcatgccctcaaac 708
           | || |||| ||| |||||||| |||||||||||||||||  |||| |||||||| ||||
Sbjct: 792 aaaattatgaggaatatgcacgacatgcaaggttatacactggcatccatgcccttaaac 851

                                                   
Query: 709 ctaagagtaagcccaagagtggcactatctctgagtcaac 748
           |||||| || | ||||||  ||  |||| |||||||||||
Sbjct: 852 ctaagaatacgtccaagaccggagctatatctgagtcaac 891
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>gb|BT017210.1| Zea mays clone EL01N0372B05.c mRNA sequence
          Length = 1278

 Score =  337 bits (170), Expect = 6e-89
 Identities = 401/478 (83%)
 Strand = Plus / Plus

                                                                       
Query: 229 ttgcttgcatggcaaccaacgaaaacctcccaccaaatgtcattaggcaattggctaaag 288
           |||||| |||||||||||| || |||||||||||||||||||| ||||||||||||||||
Sbjct: 147 ttgcttccatggcaaccaatgagaacctcccaccaaatgtcatcaggcaattggctaaag 206

                                                                       
Query: 289 aattgaagaatcttgaccagtcacctccagaagggataagagtgattgtgaatgacgatg 348
           || ||||||||||| |  |||||||| ||||||| || |  |||| ||| ||||| ||||
Sbjct: 207 aactgaagaatcttaatgagtcacctgcagaaggaattaatgtgactgtcaatgatgatg 266

                                                                       
Query: 349 acttcacaagtatttgtgcagatatagatggccctggtgggactccgtacgagaatgggg 408
           ||||||| | ||||| ||| ||||| || ||||||| ||| ||||| || |||||||| |
Sbjct: 267 acttcactactatttttgctgatattgaaggccctgctggaactccatatgagaatggag 326

                                                                       
Query: 409 ttttccggatgaagctagtcttgtcccgtgacttccctcaatccccaccgaaaggatttt 468
           | ||| ||||||||||| | ||||| | ||| ||||||||||| || || |||||||| |
Sbjct: 327 tgttcaggatgaagctattattgtctcatgatttccctcaatctcccccaaaaggattct 386

                                                                       
Query: 469 ttgtgactaaaatattccatccaaacatatcaagcaatggtgagatctgtgttaacacgt 528
           |  |||| ||||| ||||||||||||||| | |  | ||||||||| ||||| |||||  
Sbjct: 387 tcttgacaaaaattttccatccaaacatagctactagtggtgagatatgtgtaaacacac 446

                                                                       
Query: 529 tgaaaaaggattggaatcctactcatggattaaggcatgttctactggtggtgagatgcc 588
           |||| ||||||||||||||||  | ||||||||| |||||||| ||||| ||||||||||
Sbjct: 447 tgaagaaggattggaatcctagccttggattaagacatgttcttctggtagtgagatgcc 506

                                                                       
Query: 589 tgctgattgaaccattcccagaatctgcgctcaatgagcaggctggaaagatgttacttg 648
           | ||| | |||||||| || |||||||| || ||||| || ||||| |||||| |||| |
Sbjct: 507 ttctggtcgaaccatttcctgaatctgcacttaatgaacaagctgggaagatgctactcg 566

                                                                     
Query: 649 agaactatgcggactatgcacggcatgcaaggttatacacgagcattcatgccctcaa 706
           | || |||| ||| ||||||||||||||||||||||||||  |||| |||||||||||
Sbjct: 567 aaaattatgaggaatatgcacggcatgcaaggttatacactggcatccatgccctcaa 624



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 920 acctgttgctaagaagaagatggacgcgaggaagaagagcttgaagagatt 970
           |||||||| || ||| |||||||| ||  ||||||||||||||||||||||
Sbjct: 862 acctgttgataggaaaaagatggatgcacggaagaagagcttgaagagatt 912
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  145 bits (73), Expect = 4e-31
 Identities = 106/117 (90%)
 Strand = Plus / Plus

                                                                            
Query: 239      ggcaaccaacgaaaacctcccaccaaatgtcattaggcaattggctaaagaattgaagaa 298
                |||||||||||| |||||||||||||||||| |||||||||||||||| ||| |||||| 
Sbjct: 26837853 ggcaaccaacgagaacctcccaccaaatgtcgttaggcaattggctaaggaactgaagag 26837912

                                                                         
Query: 299      tcttgaccagtcacctccagaagggataagagtgattgtgaatgacgatgacttcac 355
                ||||||  ||||||||||||||||||| | ||| ||||| |||||||||||||||||
Sbjct: 26837913 tcttgatgagtcacctccagaagggattaaagttattgttaatgacgatgacttcac 26837969



 Score =  101 bits (51), Expect = 6e-18
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                            
Query: 579      gtgagatgcctgctgattgaaccattcccagaatctgcgctcaatgagcaggctggaaag 638
                ||||||||||| ||||| |||||||| || |||||||| || |||||||| ||||| || 
Sbjct: 26838541 gtgagatgccttctgatagaaccatttcctgaatctgcccttaatgagcaagctgggaaa 26838600

                                                           
Query: 639      atgttacttgagaactatgcggactatgcacggcatgcaaggt 681
                 |||| ||||||||||||| ||| |||||||||||||||||||
Sbjct: 26838601 ttgttgcttgagaactatgaggagtatgcacggcatgcaaggt 26838643



 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 89/106 (83%)
 Strand = Plus / Plus

                                                                            
Query: 472      tgactaaaatattccatccaaacatatcaagcaatggtgagatctgtgttaacacgttga 531
                |||| ||||| ||||||||||| ||| |||  | |||||| || |||||||||||  |||
Sbjct: 26838332 tgacaaaaattttccatccaaatatagcaactagtggtgaaatatgtgttaacacactga 26838391

                                                              
Query: 532      aaaaggattggaatcctactcatggattaaggcatgttctactggt 577
                | ||||||||||||||||  | ||||||||| |||||||| |||||
Sbjct: 26838392 agaaggattggaatcctagccttggattaagacatgttctgctggt 26838437



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                       
Query: 930      aagaagaagatggacgcgaggaagaagagcttgaagaga 968
                ||||||||||| || ||||||||||||||||||||||||
Sbjct: 26839075 aagaagaagattgatgcgaggaagaagagcttgaagaga 26839113



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                           
Query: 390      actccgtacgagaatggggttttccggatgaagctagtcttgtcccgtgacttccctca 448
                ||||| || |||||||| || ||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 26838155 actccatatgagaatggagtattccgtatgaagctattgttgtctcgtgacttccctca 26838213
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>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0051O02
          Length = 169532

 Score =  145 bits (73), Expect = 4e-31
 Identities = 106/117 (90%)
 Strand = Plus / Plus

                                                                         
Query: 239   ggcaaccaacgaaaacctcccaccaaatgtcattaggcaattggctaaagaattgaagaa 298
             |||||||||||| |||||||||||||||||| |||||||||||||||| ||| |||||| 
Sbjct: 92479 ggcaaccaacgagaacctcccaccaaatgtcgttaggcaattggctaaggaactgaagag 92538

                                                                      
Query: 299   tcttgaccagtcacctccagaagggataagagtgattgtgaatgacgatgacttcac 355
             ||||||  ||||||||||||||||||| | ||| ||||| |||||||||||||||||
Sbjct: 92539 tcttgatgagtcacctccagaagggattaaagttattgttaatgacgatgacttcac 92595



 Score =  101 bits (51), Expect = 6e-18
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                         
Query: 579   gtgagatgcctgctgattgaaccattcccagaatctgcgctcaatgagcaggctggaaag 638
             ||||||||||| ||||| |||||||| || |||||||| || |||||||| ||||| || 
Sbjct: 93167 gtgagatgccttctgatagaaccatttcctgaatctgcccttaatgagcaagctgggaaa 93226

                                                        
Query: 639   atgttacttgagaactatgcggactatgcacggcatgcaaggt 681
              |||| ||||||||||||| ||| |||||||||||||||||||
Sbjct: 93227 ttgttgcttgagaactatgaggagtatgcacggcatgcaaggt 93269



 Score = 75.8 bits (38), Expect = 3e-10
 Identities = 89/106 (83%)
 Strand = Plus / Plus

                                                                         
Query: 472   tgactaaaatattccatccaaacatatcaagcaatggtgagatctgtgttaacacgttga 531
             |||| ||||| ||||||||||| ||| |||  | |||||| || |||||||||||  |||
Sbjct: 92958 tgacaaaaattttccatccaaatatagcaactagtggtgaaatatgtgttaacacactga 93017

                                                           
Query: 532   aaaaggattggaatcctactcatggattaaggcatgttctactggt 577
             | ||||||||||||||||  | ||||||||| |||||||| |||||
Sbjct: 93018 agaaggattggaatcctagccttggattaagacatgttctgctggt 93063



 Score = 61.9 bits (31), Expect = 5e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                    
Query: 930   aagaagaagatggacgcgaggaagaagagcttgaagaga 968
             ||||||||||| || ||||||||||||||||||||||||
Sbjct: 93701 aagaagaagattgatgcgaggaagaagagcttgaagaga 93739



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 390   actccgtacgagaatggggttttccggatgaagctagtcttgtcccgtgacttccctca 448
             ||||| || |||||||| || ||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 92781 actccatatgagaatggagtattccgtatgaagctattgttgtctcgtgacttccctca 92839
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>emb|CT987277.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 427

 Score = 67.9 bits (34), Expect = 8e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 933 aagaagatggacgcgaggaagaagagcttgaagagattgtaa 974
           ||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 260 aagaagatggacgcgaggaagaaaagcttgaaaagattgtaa 301
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>emb|CT984949.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 427

 Score = 67.9 bits (34), Expect = 8e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 933 aagaagatggacgcgaggaagaagagcttgaagagattgtaa 974
           ||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 260 aagaagatggacgcgaggaagaaaagcttgaaaagattgtaa 301
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>emb|CT981459.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 427

 Score = 67.9 bits (34), Expect = 8e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 933 aagaagatggacgcgaggaagaagagcttgaagagattgtaa 974
           ||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 260 aagaagatggacgcgaggaagaaaagcttgaaaagattgtaa 301
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>emb|CT981185.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
           cDNA library of differentiating xylem from Eucalyptus
           gunnii
          Length = 427

 Score = 67.9 bits (34), Expect = 8e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 933 aagaagatggacgcgaggaagaagagcttgaagagattgtaa 974
           ||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 260 aagaagatggacgcgaggaagaaaagcttgaaaagattgtaa 301
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>ref|NM_120590.1| Arabidopsis thaliana ubiquitin conjugating enzyme/ ubiquitin-like
           activating enzyme (AT5G05080) mRNA, complete cds
          Length = 1222

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 504 aatggtgagatctgtgttaacacgttgaaaaaggattggaatcctactcatggattaagg 563
           ||||| ||||| |||||||||||| | ||||| |||||||| |||| || ||||||||| 
Sbjct: 562 aatggagagatatgtgttaacacgcttaaaaaagattggaaccctagtcttggattaaga 621

                   
Query: 564 catgttct 571
           ||||||||
Sbjct: 622 catgttct 629
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>gb|BT012849.1| Lycopersicon esculentum clone 113927F, mRNA sequence
          Length = 1269

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 200/256 (78%)
 Strand = Plus / Plus

                                                                       
Query: 386 tgggactccgtacgagaatggggttttccggatgaagctagtcttgtcccgtgacttccc 445
           ||||||||| || ||||||||||| ||||| |||||| |  | ||| | | ||| |||||
Sbjct: 470 tgggactccttatgagaatggggtattccgcatgaagttgattttgacacatgatttccc 529

                                                                       
Query: 446 tcaatccccaccgaaaggattttttgtgactaaaatattccatccaaacatatcaagcaa 505
           ||| |||||||| ||||| | |||| |||| || || || ||||| |||||  |   |||
Sbjct: 530 tcattccccacccaaaggttattttctgaccaagatttttcatcccaacattgcttccaa 589

                                                                       
Query: 506 tggtgagatctgtgttaacacgttgaaaaaggattggaatcctactcatggattaaggca 565
           ||| ||||| ||||| ||  | |||||||| ||||||| ||||| |   ||  || | ||
Sbjct: 590 tggcgagatttgtgtaaatgctttgaaaaaagattggagtcctagtttgggcctacgaca 649

                                                                       
Query: 566 tgttctactggtggtgagatgcctgctgattgaaccattcccagaatctgcgctcaatga 625
           ||||||  ||||||| |||||  | || || || ||||| |||||||||||||| |||||
Sbjct: 650 tgttctcatggtggtaagatgtttactaatcgagccatttccagaatctgcgctaaatga 709

                           
Query: 626 gcaggctggaaagatg 641
           ||| ||||| ||||||
Sbjct: 710 gcaagctggcaagatg 725



 Score = 52.0 bits (26), Expect = 0.005
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                  
Query: 933  aagaagatggacgcgaggaagaagagcttgaagagatt 970
            |||||||| |||||||| ||||| ||||||||||||||
Sbjct: 1071 aagaagatcgacgcgagaaagaaaagcttgaagagatt 1108
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>gb|AY116948.1| Arabidopsis thaliana AT5g05080/MUG13_6 mRNA, complete cds
          Length = 756

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 504 aatggtgagatctgtgttaacacgttgaaaaaggattggaatcctactcatggattaagg 563
           ||||| ||||| |||||||||||| | ||||| |||||||| |||| || ||||||||| 
Sbjct: 268 aatggagagatatgtgttaacacgcttaaaaaagattggaaccctagtcttggattaaga 327

                   
Query: 564 catgttct 571
           ||||||||
Sbjct: 328 catgttct 335
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>gb|AF428320.1|AF428320 Arabidopsis thaliana AT5g05080/MUG13_6 mRNA, complete cds
          Length = 1158

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 504 aatggtgagatctgtgttaacacgttgaaaaaggattggaatcctactcatggattaagg 563
           ||||| ||||| |||||||||||| | ||||| |||||||| |||| || ||||||||| 
Sbjct: 539 aatggagagatatgtgttaacacgcttaaaaaagattggaaccctagtcttggattaaga 598

                   
Query: 564 catgttct 571
           ||||||||
Sbjct: 599 catgttct 606
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>gb|AY088106.1| Arabidopsis thaliana clone 41386 mRNA, complete sequence
          Length = 1223

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 504 aatggtgagatctgtgttaacacgttgaaaaaggattggaatcctactcatggattaagg 563
           ||||| ||||| |||||||||||| | ||||| |||||||| |||| || ||||||||| 
Sbjct: 563 aatggagagatatgtgttaacacgcttaaaaaagattggaaccctagtcttggattaaga 622

                   
Query: 564 catgttct 571
           ||||||||
Sbjct: 623 catgttct 630
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>dbj|AB005245.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUG13
          Length = 86630

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                         
Query: 504   aatggtgagatctgtgttaacacgttgaaaaaggattggaatcctactcatggattaagg 563
             ||||| ||||| |||||||||||| | ||||| |||||||| |||| || ||||||||| 
Sbjct: 66626 aatggagagatatgtgttaacacgcttaaaaaagattggaaccctagtcttggattaaga 66567

                     
Query: 564   catgttct 571
             ||||||||
Sbjct: 66566 catgttct 66559



 Score = 44.1 bits (22), Expect = 1.2
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                       
Query: 600   ccattcccagaatctgcgctcaatgagcaggctggaaagatgttacttgagaactatg 657
             ||||| |||||||||||  | ||||| || ||||| |||||| ||||||| |||||||
Sbjct: 66441 ccatttccagaatctgcattaaatgaacaagctggcaagatgctacttgaaaactatg 66384
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>emb|BX830232.1|CNS0A1DN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB67ZG02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1062

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 504 aatggtgagatctgtgttaacacgttgaaaaaggattggaatcctactcatggattaagg 563
           ||||| ||||| |||||||||||| | ||||| |||||||| |||| || ||||||||| 
Sbjct: 493 aatggagagatatgtgttaacacgcttaaaaaagattggaaccctagtcttggattaaga 552

                   
Query: 564 catgttct 571
           ||||||||
Sbjct: 553 catgttct 560
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>gb|DQ027036.1| Arabidopsis thaliana ubiquitinating enzyme (At5g05080) mRNA,
           complete cds
          Length = 756

 Score = 63.9 bits (32), Expect = 1e-06
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 504 aatggtgagatctgtgttaacacgttgaaaaaggattggaatcctactcatggattaagg 563
           ||||| ||||| |||||||||||| | ||||| |||||||| |||| || ||||||||| 
Sbjct: 268 aatggagagatatgtgttaacacgcttaaaaaagattggaaccctagtcttggattaaga 327

                   
Query: 564 catgttct 571
           ||||||||
Sbjct: 328 catgttct 335
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>gb|AY112182.1| Zea mays CL10959_2 mRNA sequence
          Length = 506

 Score = 46.1 bits (23), Expect = 0.29
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 940 tggacgcgaggaagaagagcttgaagagatt 970
           |||| ||| ||||||||||||||||||||||
Sbjct: 388 tggatgcgcggaagaagagcttgaagagatt 358
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>ref|XM_966393.1| PREDICTED: Tribolium castaneum similar to CG8188-PA, isoform A
           (LOC660133), mRNA
          Length = 603

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 503 caatggtgagatctgtgttaacacgttgaaaaaggattggaa 544
           |||||| ||||| || || |||||||| ||||||||||||||
Sbjct: 270 caatggcgagatttgcgtcaacacgttaaaaaaggattggaa 311
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>emb|BX510652.6| Zebrafish DNA sequence from clone CH211-107N23 in linkage group 4,
              complete sequence
          Length = 165746

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 463    gattttttgtgactaaaatatt 484
              ||||||||||||||||||||||
Sbjct: 160094 gattttttgtgactaaaatatt 160073
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>emb|AL845324.16| Zebrafish DNA sequence from clone CH211-122L14 in linkage group 20,
              complete sequence
          Length = 160892

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 463    gattttttgtgactaaaatatt 484
              ||||||||||||||||||||||
Sbjct: 138428 gattttttgtgactaaaatatt 138407
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>gb|AC185978.2| Pan troglodytes BAC clone CH251-508B17 from chromosome 4, complete
             sequence
          Length = 198914

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 917   aggacctgttgctaagaagaa 937
             |||||||||||||||||||||
Sbjct: 26319 aggacctgttgctaagaagaa 26339
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>gb|BC106514.1| Xenopus laevis hypothetical protein LOC733371, mRNA (cDNA clone
           IMAGE:7393825), partial cds
          Length = 1142

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 959 cttgaagagattgtaagcaaa 979
           |||||||||||||||||||||
Sbjct: 749 cttgaagagattgtaagcaaa 769
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>gb|AE017308.1| Mycoplasma mobile 163K complete genome
          Length = 777079

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1136   aataacaattctcctaaagaa 1156
              |||||||||||||||||||||
Sbjct: 441945 aataacaattctcctaaagaa 441965
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>gb|AC149669.2| Bos taurus  BAC CH240-57J21 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 227069

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 923    tgttgctaagaagaagatgga 943
              |||||||||||||||||||||
Sbjct: 119798 tgttgctaagaagaagatgga 119818
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>gb|U55370.1| Caenorhabditis elegans cosmid K03B4, complete sequence
          Length = 32403

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 706   aacctaagagtaagcccaaga 726
             |||||||||||||||||||||
Sbjct: 14906 aacctaagagtaagcccaaga 14926
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>dbj|AP007292.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT45D08, TM0313,
             complete sequence
          Length = 98441

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 181   tctgctcacagagttgcttcagaag 205
             |||||||| ||||||||||||||||
Sbjct: 65243 tctgctcagagagttgcttcagaag 65219
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>emb|CR753899.5| Zebrafish DNA sequence from clone DKEY-267F18 in linkage group 5,
            complete sequence
          Length = 205476

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 464  attttttgtgactaaaatatt 484
            |||||||||||||||||||||
Sbjct: 9758 attttttgtgactaaaatatt 9778
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>emb|BX649468.12| Zebrafish DNA sequence from clone CH211-152C2 in linkage group 4,
              complete sequence
          Length = 164705

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 460    aaggattttttgtgactaaaatatt 484
              |||||||||| ||||||||||||||
Sbjct: 161350 aaggatttttggtgactaaaatatt 161374
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>gb|AC074378.4| Homo sapiens BAC clone RP11-4I17 from 4, complete sequence
          Length = 154112

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 917   aggacctgttgctaagaagaa 937
             |||||||||||||||||||||
Sbjct: 56118 aggacctgttgctaagaagaa 56138
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>gb|AC140484.1| Homo sapiens BAC clone RP11-806A6 from 4, complete sequence
          Length = 102884

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 917  aggacctgttgctaagaagaa 937
            |||||||||||||||||||||
Sbjct: 2647 aggacctgttgctaagaagaa 2667
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>dbj|AP006120.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT39P22, TM0204,
             complete sequence
          Length = 98532

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 181   tctgctcacagagttgcttcagaag 205
             |||||||| ||||||||||||||||
Sbjct: 80638 tctgctcagagagttgcttcagaag 80614
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>gb|DQ288936.1| Globodera pallida clone sc4ap4p311 unknown mitochondrial sequence
          Length = 3368

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 411  ttccggatgaagctagtcttg 431
            |||||||||||||||||||||
Sbjct: 3079 ttccggatgaagctagtcttg 3059
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>gb|DQ288935.1| Globodera pallida clone sc4ap4p310 unknown mitochondrial sequence
          Length = 3388

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 411  ttccggatgaagctagtcttg 431
            |||||||||||||||||||||
Sbjct: 3099 ttccggatgaagctagtcttg 3079
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>gb|DQ288933.1| Globodera pallida clone sc4ap4p29 unknown mitochondrial sequence
          Length = 3362

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 411  ttccggatgaagctagtcttg 431
            |||||||||||||||||||||
Sbjct: 3073 ttccggatgaagctagtcttg 3053
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>gb|DQ288931.1| Globodera pallida clone sc4ap4p22 unknown mitochondrial sequence
          Length = 3359

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 411  ttccggatgaagctagtcttg 431
            |||||||||||||||||||||
Sbjct: 3071 ttccggatgaagctagtcttg 3051
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>gb|DQ288928.1| Globodera pallida clone sc4agou4 unknown mitochondrial sequence
          Length = 3404

 Score = 42.1 bits (21), Expect = 4.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 411  ttccggatgaagctagtcttg 431
            |||||||||||||||||||||
Sbjct: 3116 ttccggatgaagctagtcttg 3096


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 208,984,274
Number of extensions: 10768123
Number of successful extensions: 229042
Number of sequences better than 10.0: 39
Number of HSP's gapped: 229040
Number of HSP's successfully gapped: 60
Length of query: 1207
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1184
Effective length of database: 18,503,978,556
Effective search space: 21908710610304
Effective search space used: 21908710610304
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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