ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58n06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK105051:Os07g0684100 | 37 | 0.037 | 2 | AK104552:Os07g0684100 | 37 | 0.037 | 3 | AK066094:Os07g0684100 | 37 | 0.037 | 4 | AK120639:Os03g0213400 | 35 | 0.14 | 5 | AK099757:Os03g0213400 | 35 | 0.14 | 6 | AK068409:Os10g0554200 | 30 | 2.7 | 7 | AK101934:Os02g0527300 | 30 | 3.5 | 8 | AK066949:Os06g0673700 | 30 | 4.5 | 9 | AK108093:Os01g0800800 | 29 | 7.7 |
|---|
>AK105051:Os07g0684100 | Length = 279 Score = 36.6 bits (83), Expect = 0.037 Identities = 18/35 (51%), Positives = 25/35 (71%) Frame = +2 Query: 974 EERMQRNMREIHSIQDVAGSLLHPHRRLINIKFFS 1078 E+ +Q NMREI S QD+A SLL+ +L+ + FFS Sbjct: 88 EKCLQPNMREIESAQDLADSLLNAGDKLVVVDFFS 122
>AK104552:Os07g0684100 | Length = 279 Score = 36.6 bits (83), Expect = 0.037 Identities = 18/35 (51%), Positives = 25/35 (71%) Frame = +2 Query: 974 EERMQRNMREIHSIQDVAGSLLHPHRRLINIKFFS 1078 E+ +Q NMREI S QD+A SLL+ +L+ + FFS Sbjct: 88 EKCLQPNMREIESAQDLADSLLNAGDKLVVVDFFS 122
>AK066094:Os07g0684100 | Length = 279 Score = 36.6 bits (83), Expect = 0.037 Identities = 18/35 (51%), Positives = 25/35 (71%) Frame = +2 Query: 974 EERMQRNMREIHSIQDVAGSLLHPHRRLINIKFFS 1078 E+ +Q NMREI S QD+A SLL+ +L+ + FFS Sbjct: 88 EKCLQPNMREIESAQDLADSLLNAGDKLVVVDFFS 122
>AK120639:Os03g0213400 | Length = 682 Score = 34.7 bits (78), Expect = 0.14 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +2 Query: 275 AFDEEPRQFFSMADNSLHMI 334 A DE+PRQF SMADNSL MI Sbjct: 134 ASDEKPRQFLSMADNSLDMI 153
>AK099757:Os03g0213400 | Length = 1139 Score = 34.7 bits (78), Expect = 0.14 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +2 Query: 275 AFDEEPRQFFSMADNSLHMI 334 A DE+PRQF SMADNSL MI Sbjct: 591 ASDEKPRQFLSMADNSLDMI 610
>AK068409:Os10g0554200 | Length = 596 Score = 30.4 bits (67), Expect = 2.7 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = +3 Query: 96 LLLPHSRAPGREPP-CGSPRGTTRSCGSTVGSTIGAPGLDWWSSLACSGDGVLRPRI 263 +L + APG PP CG P+G + C + G+ +G L + L G G L+ + Sbjct: 118 ILTISTAAPGLRPPACGDPKGASAECVAADGTQLGVLYLGLY--LTALGTGGLKSSV 172
>AK101934:Os02g0527300 | Length = 498 Score = 30.0 bits (66), Expect = 3.5 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = +3 Query: 132 PPCGSPRGTTRSCGSTVGSTIGAPGLDWWSSLA-CSG 239 PP PRG + G + G + +PGLD SS A C G Sbjct: 359 PPASGPRGQDPTIGRSKGKNVLSPGLDATSSEADCLG 395
>AK066949:Os06g0673700 | Length = 124 Score = 29.6 bits (65), Expect = 4.5 Identities = 26/69 (37%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Frame = +3 Query: 105 PHSRAPGREPPCGSPRGTTRSCGST-VGSTIGAPGLDWWSSLACSGDGVLRPRIQPTQHS 281 P S AP R PP GSPR T + G T S P A RPR PT Sbjct: 42 PSSPAPRRPPPPGSPRRRTPTSGRTCTPSAAPCPP----RRRAARRTRQARPRTTPTPPP 97 Query: 282 MRNQGSSSA 308 R + SS A Sbjct: 98 RRWRTSSPA 106
>AK108093:Os01g0800800 | Length = 231 Score = 28.9 bits (63), Expect = 7.7 Identities = 16/40 (40%), Positives = 18/40 (45%) Frame = -3 Query: 247 TPSPLHAREDHQSRPGAPMVEPTVEPHDRVVPRGEPQGGS 128 TPSP R + PGAP PTV P P+ GS Sbjct: 1 TPSP-RRRPPASAPPGAPPSAPTVSGCSSAAPSSRPRSGS 39 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 35,767,494 Number of extensions: 816938 Number of successful extensions: 1957 Number of sequences better than 10.0: 9 Number of HSP's gapped: 1955 Number of HSP's successfully gapped: 9 Length of query: 408 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 305 Effective length of database: 11,275,632 Effective search space: 3439067760 Effective search space used: 3439067760 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
