ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf58n06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8WXS8:ATS14_HUMAN ADAMTS-14 precursor - Homo sapiens (Human) 33 3.1
2Q9HAZ2:PRD16_HUMAN PR domain zinc finger protein 16 - Homo sapie... 32 5.3
3Q14FA0:YCF1_POPAL Putative membrane protein ycf1 - Populus alba ... 31 9.1

>Q8WXS8:ATS14_HUMAN ADAMTS-14 precursor - Homo sapiens (Human)|
          Length = 1223
 Score = 32.7 bits (73), Expect = 3.1
 Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 13/74 (17%)
 Frame = -3

Query: 298  LPWFLIECCVGCIRGRSTPSPLHAREDHQ----SRPGAPMVEPTVEPHDRVVPRGEPQGG 131
            +P +   CCV CI+  S P+P            S PG+P+  P  +P D   P G+P G 
Sbjct: 1082 IPGYHRLCCVSCIKKASGPNPGPDPGPTSLPPFSTPGSPLPGPQ-DPADAAEPPGKPTGS 1140

Query: 130  ---------SLPGA 116
                      LPGA
Sbjct: 1141 EDHQHGRATQLPGA 1154



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>Q9HAZ2:PRD16_HUMAN PR domain zinc finger protein 16 - Homo sapiens (Human)|
          Length = 1276

 Score = 32.0 bits (71), Expect = 5.3
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
 Frame = -3

Query: 244 PSPLHAREDHQSRPGAPMVEPTVEPHDRVVPRG-EPQGGSLPGARL--WGRSK 95
           PSP    ED   + G+P   P   P D  +P   E +  S+PGA L  W + K
Sbjct: 51  PSPFPTSEDFTPKEGSPYEAPVYIPEDIPIPADFELRESSIPGAGLGVWAKRK 103



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>Q14FA0:YCF1_POPAL Putative membrane protein ycf1 - Populus alba (White poplar)|
          Length = 1820

 Score = 31.2 bits (69), Expect = 9.1
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = +1

Query: 820 KYSRF*ISTEDLLFVMFFPWLCRIGYIMITDA----EKGSSSQSRWRENCKT*ISGRKDA 987
           K+  F   T +L+ +MF  W+C+     I+D+    EK   S  + +E     I  R++ 
Sbjct: 709 KFLFFAFDTSELMKIMFINWMCKNAEFTISDSTYTEEKTKESDKKEKEE----IKNRREE 764

Query: 988 EKHE 999
           +K E
Sbjct: 765 DKRE 768


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 222,419,504
Number of extensions: 4960911
Number of successful extensions: 11390
Number of sequences better than 10.0: 3
Number of HSP's gapped: 11345
Number of HSP's successfully gapped: 3
Length of query: 408
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 292
Effective length of database: 68,868,219
Effective search space: 20109519948
Effective search space used: 20109519948
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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