ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf55b12 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os12g19470:12012.t01792:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast| precursor, putative, expressed Length = 2281 Score = 171 bits (367), Expect(4) = 2e-74 Identities = 63/77 (81%), Positives = 72/77 (93%) Frame = +2 / +3 Query: 245 VFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQV 424 V+RE++ SPGYYDGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQV Sbjct: 597 VYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQV 776 Query: 425 QCVSFIAFRPPGCEESG 475 Q +SFIA++PPGCEESG Sbjct: 777 QLISFIAYKPPGCEESG 827 Score = 70.3 bits (147), Expect(4) = 2e-74 Identities = 30/34 (88%), Positives = 34/34 (100%) Frame = +2 / +2 Query: 44 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 145 MAP+VMASSAT+VAPFQGLKSTAGLPV+RRSS+S Sbjct: 206 MAPSVMASSATSVAPFQGLKSTAGLPVNRRSSSS 307 Score = 53.3 bits (110), Expect(4) = 2e-74 Identities = 20/24 (83%), Positives = 21/24 (87%) Frame = +2 / +3 Query: 185 QVWPIEGIKKFETLSYLPPLVFRE 256 QVWPIEGIKKFETLSYLPPL + Sbjct: 453 QVWPIEGIKKFETLSYLPPLTVED 524 Score = 42.3 bits (86), Expect(4) = 2e-74 Identities = 17/21 (80%), Positives = 18/21 (85%) Frame = +2 / +2 Query: 128 RRSSASLGRVSNGGRIRCMQV 190 R SS+S G VSNGGRIRCMQV Sbjct: 293 RSSSSSFGNVSNGGRIRCMQV 355 Score = 114 bits (244), Expect(4) = 2e-47 Identities = 52/77 (67%), Positives = 57/77 (74%) Frame = -3 / -1 Query: 474 PDSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIV 295 PDSSQPGGL AMKL +CTC LSKPM+RT ASGY T VASVHPN+GSFH+V Sbjct: 826 PDSSQPGGLYAMKLINCTCLTLSKPMMRTKASGYAFFASSSSLSTWVASVHPNMGSFHMV 647 Query: 294 QYRPS*YPGELLCSRKT 244 QY PS*YPG+L SR T Sbjct: 646 QYLPS*YPGDL*FSR*T 596 Score = 59.3 bits (123), Expect(4) = 2e-47 Identities = 24/27 (88%), Positives = 25/27 (92%) Frame = -3 / -2 Query: 123 TGRPAVDLSPWKGATVVADEAITAGAM 43 TGRPAVDLSPWKGAT VADEAIT GA+ Sbjct: 285 TGRPAVDLSPWKGATEVADEAITEGAI 205 Score = 41.8 bits (85), Expect(4) = 2e-47 Identities = 17/23 (73%), Positives = 18/23 (78%) Frame = -3 / -1 Query: 255 SRKTRGGK*DRVSNFLIPSIGHT 187 S GGK DRVSNFL+PSIGHT Sbjct: 523 SSTVNGGKYDRVSNFLMPSIGHT 455 Score = 30.4 bits (60), Expect(4) = 2e-47 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = -1 / -3 Query: 188 PACT*SFRHC*PC 150 PAC *SFRHC* C Sbjct: 353 PACI*SFRHC*RC 315 Score = 45.1 bits (92), Expect(4) = 2e-17 Identities = 21/34 (61%), Positives = 26/34 (76%) Frame = +1 / +2 Query: 385 LRPYHRLRQPAAGAVRQLHRLQATGLRGVRQGIN 486 LR +H L Q AGAV QLHR+ ATGLRGVR+ ++ Sbjct: 737 LRSHHWL*QR*AGAVNQLHRV*ATGLRGVRRQLS 838 Score = 36.8 bits (74), Expect(4) = 2e-17 Identities = 16/28 (57%), Positives = 21/28 (75%) Frame = +1 / +2 Query: 244 RLP*AQQLPRVLRRPILDNVEAAYVRMH 327 RLP* Q+ R+L R +LD+VE A+V MH Sbjct: 596 RLP*ESQITRIL*R*VLDHVETAHVWMH 679 Score = 35.4 bits (71), Expect(4) = 2e-17 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = +1 / +1 Query: 43 HGPRRDGFVGYHRRTLPGAQVH 108 +G DGFVG+ R +LPGAQVH Sbjct: 205 NGSLGDGFVGHLRGSLPGAQVH 270 Score = 34.1 bits (68), Expect(4) = 2e-17 Identities = 13/17 (76%), Positives = 13/17 (76%) Frame = +3 / +1 Query: 186 RCGRLRVSRSSRPCLTC 236 RCGRLR RSSR C TC Sbjct: 454 RCGRLRALRSSRLCRTC 504 Score = 42.3 bits (86), Expect(4) = 8e-17 Identities = 21/32 (65%), Positives = 24/32 (75%) Frame = -1 / -2 Query: 470 TPRNPVA*RR*S*RTAPAAGCRSR*YGRKRQG 375 TPRNPVA R*S* TAPA C+S+* R+ QG Sbjct: 822 TPRNPVAYTR*S*LTAPA*RCQSQ*CERRHQG 727 Score = 41.8 bits (85), Expect(4) = 8e-17 Identities = 18/31 (58%), Positives = 20/31 (64%) Frame = -1 / -2 Query: 335 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRR 243 W RCI+T A ST SS R S R C +HGRR Sbjct: 687 WHRCIQTWAVSTWSSTYRHSIRVICDSHGRR 595 Score = 35.4 bits (71), Expect(4) = 8e-17 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = -2 / -3 Query: 235 QVRQGLELLDTLNRPHL 185 QVRQ LELL+ LNRPHL Sbjct: 503 QVRQSLELLNALNRPHL 453 Score = 29.5 bits (58), Expect(4) = 8e-17 Identities = 14/20 (70%), Positives = 14/20 (70%) Frame = -1 / -3 Query: 104 T*APGRVRRW*PTKPSRRGP 45 T*APGR R PTKPS R P Sbjct: 266 T*APGREPRRWPTKPSPREP 207 Score = 40.0 bits (81), Expect(3) = 8e-07 Identities = 19/30 (63%), Positives = 21/30 (70%) Frame = -2 / -3 Query: 490 RSLCLAGLLATRWPEGDEADALHLPQVVEA 401 + L A LLATRW DEAD LHLP VV+A Sbjct: 842 KRLVAA*LLATRWLIRDEAD*LHLPNVVKA 753 Score = 29.9 bits (59), Expect(3) = 8e-07 Identities = 14/17 (82%), Positives = 14/17 (82%) Frame = -1 / -2 Query: 236 ASKTGSRTS*YPQSATP 186 AS T SRTS* PQSATP Sbjct: 504 ASTTESRTS*CPQSATP 454 Score = 25.8 bits (50), Expect(3) = 8e-07 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = -2 / -3 Query: 334 GVGASEHRQLPH 299 G+GAS+H Q PH Sbjct: 686 GIGASKHGQFPH 651 Score = 33.6 bits (67), Expect(3) = 2e-05 Identities = 16/23 (69%), Positives = 16/23 (69%) Frame = +3 / +1 Query: 417 GRCSASASSPSGHRVARSPARHK 485 GRCS SASS HRVARS A K Sbjct: 769 GRCS*SASSRISHRVARSQAATK 837 Score = 30.9 bits (61), Expect(3) = 2e-05 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = +1 / +2 Query: 178 VHAGVAD*GYQEVRDPVLLA 237 + +GVAD*G+ EVRD V+LA Sbjct: 446 IQSGVAD*GH*EVRDSVVLA 505 Score = 26.7 bits (52), Expect(3) = 2e-05 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = +3 / +1 Query: 300 CGSCLCSDAPTP 335 CG+C C DAP P Sbjct: 652 CGNCPCLDAPMP 687
>LOC_Os12g19381:12012.t01783:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast| precursor, putative, expressed Length = 1193 Score = 171 bits (367), Expect(4) = 2e-73 Identities = 63/77 (81%), Positives = 72/77 (93%) Frame = +2 / +2 Query: 245 VFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQV 424 V+RE++ SPGYYDGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQV Sbjct: 491 VYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQV 670 Query: 425 QCVSFIAFRPPGCEESG 475 Q +SFIA++PPGCEESG Sbjct: 671 QLISFIAYKPPGCEESG 721 Score = 70.7 bits (148), Expect(4) = 2e-73 Identities = 31/37 (83%), Positives = 33/37 (89%) Frame = +2 / +2 Query: 35 YSTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 145 Y MAP VMASSAT+VAPFQGLKSTAGLPVSRRS+ S Sbjct: 83 YVAMAPTVMASSATSVAPFQGLKSTAGLPVSRRSTNS 193 Score = 53.8 bits (111), Expect(4) = 2e-73 Identities = 20/25 (80%), Positives = 22/25 (88%) Frame = +2 / +2 Query: 182 MQVWPIEGIKKFETLSYLPPLVFRE 256 +QVWPIEGIKKFETLSYLPPL + Sbjct: 344 IQVWPIEGIKKFETLSYLPPLTVED 418 Score = 38.2 bits (77), Expect(4) = 2e-73 Identities = 14/24 (58%), Positives = 19/24 (79%) Frame = +2 / +2 Query: 128 RRSSASLGRVSNGGRIRCMQVWPI 199 R +++ G VSNGGRI+CMQV+ I Sbjct: 179 RSTNSGFGNVSNGGRIKCMQVYMI 250 Score = 63.4 bits (132), Expect(5) = 6e-42 Identities = 27/33 (81%), Positives = 28/33 (84%) Frame = -3 / -3 Query: 474 PDSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASG 376 PDSSQPGGL AMKL +CTC LSKPMIRT ASG Sbjct: 720 PDSSQPGGL*AMKLINCTCLTLSKPMIRTKASG 622 Score = 54.7 bits (113), Expect(5) = 6e-42 Identities = 23/31 (74%), Positives = 26/31 (83%) Frame = -3 / -3 Query: 336 VASVHPNIGSFHIVQYRPS*YPGELLCSRKT 244 VASV PN+GSFH+VQY PS*YPG+L SR T Sbjct: 582 VASVQPNMGSFHMVQYLPS*YPGDLWFSR*T 490 Score = 52.8 bits (109), Expect(5) = 6e-42 Identities = 21/27 (77%), Positives = 23/27 (85%) Frame = -3 / -3 Query: 123 TGRPAVDLSPWKGATVVADEAITAGAM 43 TG PAVDLSPW GAT VA+EAIT GA+ Sbjct: 171 TGSPAVDLSPWNGATEVAEEAITVGAI 91 Score = 40.0 bits (81), Expect(5) = 6e-42 Identities = 16/23 (69%), Positives = 18/23 (78%) Frame = -3 / -3 Query: 255 SRKTRGGK*DRVSNFLIPSIGHT 187 S GG+ DRVSNFL+PSIGHT Sbjct: 417 SSTVSGGRYDRVSNFLMPSIGHT 349 Score = 33.6 bits (67), Expect(5) = 6e-42 Identities = 13/16 (81%), Positives = 13/16 (81%) Frame = -1 / -1 Query: 197 SATPACT*SFRHC*PC 150 S PACT*SFRHC* C Sbjct: 248 SYIPACT*SFRHC*RC 201 Score = 47.3 bits (97), Expect(5) = 1e-27 Identities = 22/29 (75%), Positives = 22/29 (75%) Frame = +1 / +1 Query: 385 LRPYHRLRQPAAGAVRQLHRLQATGLRGV 471 L PYHRLRQ AGAV LHRLQA LRGV Sbjct: 631 LCPYHRLRQRQAGAVD*LHRLQAPRLRGV 717 Score = 42.3 bits (86), Expect(5) = 1e-27 Identities = 18/28 (64%), Positives = 23/28 (82%) Frame = +1 / +1 Query: 244 RLP*AQQLPRVLRRPILDNVEAAYVRMH 327 RLP* Q+ RVLR +LD+VEAA+VR+H Sbjct: 490 RLP*EPQVSRVLRWQVLDHVEAAHVRLH 573 Score = 39.1 bits (79), Expect(5) = 1e-27 Identities = 15/20 (75%), Positives = 16/20 (80%) Frame = +3 / +3 Query: 186 RCGRLRVSRSSRPCLTCHPS 245 RCG+LR SRSSRP TCH S Sbjct: 348 RCGQLRASRSSRPYRTCHHS 407 Score = 35.4 bits (71), Expect(5) = 1e-27 Identities = 14/32 (43%), Positives = 21/32 (65%) Frame = +1 / +1 Query: 13 ASSSLQLIQYHGPRRDGFVGYHRRTLPGAQVH 108 AS ++ +GP RDG +G+ R ++P AQVH Sbjct: 61 ASKLAN*LRGYGPHRDGLLGHLRGSIPRAQVH 156 Score = 30.9 bits (61), Expect(5) = 1e-27 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = +1 / +1 Query: 163 WRKDQVHAGVAD 198 WRKDQVHAG+ D Sbjct: 214 WRKDQVHAGIYD 249 Score = 46.0 bits (94), Expect(3) = 5e-19 Identities = 22/33 (66%), Positives = 26/33 (78%) Frame = -1 / -1 Query: 473 RTPRNPVA*RR*S*RTAPAAGCRSR*YGRKRQG 375 +TPRN A RR*S* TAPA CRSR*YG++ +G Sbjct: 719 QTPRNLGACRR*S*STAPA*RCRSR*YGQRHRG 621 Score = 46.0 bits (94), Expect(3) = 5e-19 Identities = 19/31 (61%), Positives = 22/31 (70%) Frame = -1 / -1 Query: 335 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRR 243 W RC RT AAST S+ RSTR +C +HGRR Sbjct: 581 WHRCSRTWAASTWSNTCHRSTRETCGSHGRR 489 Score = 39.6 bits (80), Expect(3) = 5e-19 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = -2 / -2 Query: 244 EGWQVRQGLELLDTLNRPHLH 182 E WQVR GLELLD LN PHL+ Sbjct: 406 EWWQVR*GLELLDALNWPHLN 344 Score = 35.9 bits (72), Expect(3) = 6e-07 Identities = 13/21 (61%), Positives = 20/21 (95%) Frame = +1 / +1 Query: 178 VHAGVAD*GYQEVRDPVLLAT 240 +++GVA+*G+QEVRDP++ AT Sbjct: 340 IYSGVAN*GHQEVRDPIVPAT 402 Score = 31.3 bits (62), Expect(3) = 6e-07 Identities = 15/25 (60%), Positives = 17/25 (68%) Frame = +3 / +3 Query: 417 GRCSASASSPSGHRVARSPARHKLR 491 GRCS ASSP+ +VARS KLR Sbjct: 663 GRCS*LASSPTSPQVARSLVATKLR 737 Score = 27.2 bits (53), Expect(3) = 6e-07 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +3 / +3 Query: 300 CGSCLCSDAPTP 335 CGSC CS AP P Sbjct: 546 CGSCPCSAAPMP 581 Score = 35.9 bits (72), Expect(3) = 2e-06 Identities = 18/29 (62%), Positives = 19/29 (65%) Frame = -2 / -2 Query: 487 SLCLAGLLATRWPEGDEADALHLPQVVEA 401 SL LLAT GDEA+ LHLP VVEA Sbjct: 733 SLVATRLLATWGLVGDEANQLHLPDVVEA 647 Score = 28.1 bits (55), Expect(3) = 2e-06 Identities = 9/12 (75%), Positives = 11/12 (91%) Frame = -2 / -2 Query: 334 GVGASEHRQLPH 299 G+GA+EH QLPH Sbjct: 580 GIGAAEHGQLPH 545 Score = 28.1 bits (55), Expect(3) = 2e-06 Identities = 13/18 (72%), Positives = 13/18 (72%) Frame = -1 / -1 Query: 239 VASKTGSRTS*YPQSATP 186 VA GSRTS* PQ ATP Sbjct: 401 VAGTIGSRTS*CPQLATP 348
>LOC_Os12g19394:12012.t004152:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast| precursor, putative, expressed Length = 1344 Score = 171 bits (367), Expect(4) = 8e-73 Identities = 63/77 (81%), Positives = 72/77 (93%) Frame = +2 / +3 Query: 245 VFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQV 424 V+RE++ SPGYYDGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQV Sbjct: 612 VYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQV 791 Query: 425 QCVSFIAFRPPGCEESG 475 Q +SFIA++PPGCEESG Sbjct: 792 QLISFIAYKPPGCEESG 842 Score = 68.4 bits (143), Expect(4) = 8e-73 Identities = 29/34 (85%), Positives = 33/34 (97%) Frame = +2 / +3 Query: 44 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 145 MAP VMASSAT+VAPFQGLKSTAGLPVSRRS+++ Sbjct: 207 MAPTVMASSATSVAPFQGLKSTAGLPVSRRSNSA 308 Score = 53.3 bits (110), Expect(4) = 8e-73 Identities = 20/24 (83%), Positives = 21/24 (87%) Frame = +2 / +3 Query: 185 QVWPIEGIKKFETLSYLPPLVFRE 256 QVWPIEGIKKFETLSYLPPL + Sbjct: 468 QVWPIEGIKKFETLSYLPPLTVED 539 Score = 39.1 bits (79), Expect(4) = 8e-73 Identities = 16/21 (76%), Positives = 17/21 (80%) Frame = +2 / +3 Query: 128 RRSSASLGRVSNGGRIRCMQV 190 R +SA LG VSNGGRI CMQV Sbjct: 294 RSNSAGLGSVSNGGRISCMQV 356 Score = 116 bits (247), Expect(4) = 4e-44 Identities = 53/77 (68%), Positives = 57/77 (74%) Frame = -3 / -3 Query: 474 PDSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIV 295 PDSSQPGGL AMKL +CTC LSKPM+RT ASGY T VASVHPNIGSFH+V Sbjct: 841 PDSSQPGGL*AMKLINCTCLTLSKPMMRTNASGYAFLASSSSLSTWVASVHPNIGSFHMV 662 Query: 294 QYRPS*YPGELLCSRKT 244 QY PS*YPG+L SR T Sbjct: 661 QYLPS*YPGDLWFSR*T 611 Score = 57.0 bits (118), Expect(4) = 4e-44 Identities = 23/27 (85%), Positives = 24/27 (88%) Frame = -3 / -3 Query: 123 TGRPAVDLSPWKGATVVADEAITAGAM 43 TG PAVDLSPWKGAT VADEAIT GA+ Sbjct: 286 TGSPAVDLSPWKGATEVADEAITVGAI 206 Score = 44.1 bits (90), Expect(4) = 4e-44 Identities = 17/24 (70%), Positives = 19/24 (79%) Frame = -3 / -3 Query: 255 SRKTRGGK*DRVSNFLIPSIGHTC 184 S GG+ DRVSNFL+PSIGHTC Sbjct: 538 SSTVSGGRYDRVSNFLMPSIGHTC 467 Score = 23.5 bits (45), Expect(4) = 4e-44 Identities = 7/13 (53%), Positives = 11/13 (84%) Frame = -1 / -3 Query: 626 IYAAQPMLVHTQI 588 ++A QPML+HT + Sbjct: 1075 MHALQPMLIHTYV 1037 Score = 48.3 bits (99), Expect(5) = 3e-24 Identities = 21/31 (67%), Positives = 25/31 (80%) Frame = +1 / +2 Query: 394 YHRLRQPAAGAVRQLHRLQATGLRGVRQGIN 486 +HRLRQ AGAV LHRLQA GLRGVR+ ++ Sbjct: 761 HHRLRQRQAGAVD*LHRLQAPGLRGVRRKLS 853 Score = 43.2 bits (88), Expect(5) = 3e-24 Identities = 16/22 (72%), Positives = 17/22 (77%) Frame = +3 / +1 Query: 186 RCGRLRVSRSSRPCLTCHPSSS 251 RCGRL+ SRS RPC TCH S S Sbjct: 469 RCGRLKASRSLRPCRTCHRSRS 534 Score = 38.2 bits (77), Expect(5) = 3e-24 Identities = 18/28 (64%), Positives = 21/28 (75%) Frame = +1 / +2 Query: 244 RLP*AQQLPRVLRRPILDNVEAAYVRMH 327 RLP* Q+ VL +LD+VEAAYVRMH Sbjct: 611 RLP*EPQVSWVL*WQVLDHVEAAYVRMH 694 Score = 35.9 bits (72), Expect(5) = 3e-24 Identities = 13/22 (59%), Positives = 17/22 (77%) Frame = +1 / +2 Query: 43 HGPRRDGFVGYHRRTLPGAQVH 108 +G RDG VG+ R +LPGAQ+H Sbjct: 206 NGAHRDGLVGHLRCSLPGAQIH 271 Score = 24.0 bits (46), Expect(5) = 3e-24 Identities = 7/12 (58%), Positives = 11/12 (91%) Frame = +3 / +2 Query: 591 LCMYEHRLCSIY 626 +CMY+HRL S++ Sbjct: 1040 ICMYQHRLKSMH 1075 Score = 47.3 bits (97), Expect(5) = 2e-23 Identities = 22/31 (70%), Positives = 23/31 (74%) Frame = -2 / -2 Query: 493 PRSLCLAGLLATRWPEGDEADALHLPQVVEA 401 P SL AGLLATR GDEA+ LHLP VVEA Sbjct: 860 PTSLVSAGLLATRGLVGDEANQLHLPDVVEA 768 Score = 46.4 bits (95), Expect(5) = 2e-23 Identities = 19/31 (61%), Positives = 23/31 (74%) Frame = -1 / -1 Query: 335 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRR 243 W +CIRT*AAST SS ST+ +C +HGRR Sbjct: 702 WHQCIRT*AASTWSSTCHHSTQETCGSHGRR 610 Score = 43.2 bits (88), Expect(5) = 2e-23 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = -2 / -2 Query: 244 EGWQVRQGLELLDTLNRPHL 185 E WQVRQGL+LLD NRPHL Sbjct: 527 ERWQVRQGLKLLDAFNRPHL 468 Score = 27.6 bits (54), Expect(5) = 2e-23 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -1 / -1 Query: 101 *APGRVRRW*PTKPSRRGP 45 *APGR +R PT+PSR P Sbjct: 264 *APGREQRRWPTRPSRWAP 208 Score = 22.1 bits (42), Expect(5) = 2e-23 Identities = 8/10 (80%), Positives = 8/10 (80%) Frame = -2 / -1 Query: 622 MLHNLCSYIH 593 ML NLC YIH Sbjct: 1071 MLFNLC*YIH 1042 Score = 41.8 bits (85), Expect(3) = 1e-08 Identities = 21/26 (80%), Positives = 21/26 (80%) Frame = -1 / -1 Query: 473 RTPRNPVA*RR*S*RTAPAAGCRSR* 396 RTPRNP A RR*S* TAPA CRSR* Sbjct: 840 RTPRNPGACRR*S*STAPA*RCRSR* 763 Score = 29.9 bits (59), Expect(3) = 1e-08 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -2 / -2 Query: 334 GVGASEHRQLPH 299 G+ ASEHRQLPH Sbjct: 701 GISASEHRQLPH 666 Score = 29.0 bits (57), Expect(3) = 1e-08 Identities = 14/19 (73%), Positives = 15/19 (78%) Frame = -1 / -1 Query: 239 VASKTGSRTS*YPQSATPA 183 VA TGS+TS* QSATPA Sbjct: 522 VAGTTGSQTS*CLQSATPA 466 Score = 40.5 bits (82), Expect(3) = 2e-08 Identities = 19/33 (57%), Positives = 23/33 (69%) Frame = +3 / +1 Query: 417 GRCSASASSPSGHRVARSPARHKLRGETMAYVV 515 GRCS ASSP+ RVARSPA KL G+ + +V Sbjct: 784 GRCS*LASSPTSPRVARSPAETKLVGKPASSLV 882 Score = 29.9 bits (59), Expect(3) = 2e-08 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = +1 / +2 Query: 184 AGVAD*GYQEVRDPVLLAT 240 AGVAD* +QEV DPV+ AT Sbjct: 467 AGVAD*RHQEV*DPVVPAT 523 Score = 29.5 bits (58), Expect(3) = 2e-08 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = +3 / +1 Query: 300 CGSCLCSDAPTP 335 CGSCLCSDA P Sbjct: 667 CGSCLCSDALMP 702
>LOC_Os12g17600:12012.t01612:unspliced-genomic ribulose bisphosphate carboxylase small chain C, chloroplast| precursor, putative, expressed Length = 1248 Score = 171 bits (367), Expect(4) = 5e-72 Identities = 63/77 (81%), Positives = 72/77 (93%) Frame = +2 / +2 Query: 245 VFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQV 424 V+RE++ SPGYYDGRYWTMWKLPMFGCTDATQVL E+EE KK YPDA+VRIIGFDN+RQV Sbjct: 656 VYRENHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQV 835 Query: 425 QCVSFIAFRPPGCEESG 475 Q +SFIA++PPGCEESG Sbjct: 836 QLISFIAYKPPGCEESG 886 Score = 68.0 bits (142), Expect(4) = 5e-72 Identities = 29/34 (85%), Positives = 32/34 (94%) Frame = +2 / +1 Query: 44 MAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 145 MAP+VMASSATTVAPFQGLKSTAG+PV+RRS S Sbjct: 265 MAPSVMASSATTVAPFQGLKSTAGMPVARRSGNS 366 Score = 51.0 bits (105), Expect(4) = 5e-72 Identities = 19/23 (82%), Positives = 20/23 (86%) Frame = +2 / +2 Query: 188 VWPIEGIKKFETLSYLPPLVFRE 256 VWPIEGIKKFETLSYLPPL + Sbjct: 515 VWPIEGIKKFETLSYLPPLTVED 583 Score = 39.1 bits (79), Expect(4) = 5e-72 Identities = 15/21 (71%), Positives = 17/21 (80%) Frame = +2 / +1 Query: 128 RRSSASLGRVSNGGRIRCMQV 190 R ++S G VSNGGRIRCMQV Sbjct: 352 RSGNSSFGNVSNGGRIRCMQV 414 Score = 115 bits (245), Expect(4) = 3e-47 Identities = 53/77 (68%), Positives = 56/77 (72%) Frame = -3 / -1 Query: 474 PDSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIV 295 PDSSQPGGL AMKL CTC LSKPMIRT ASGY T VASVHPN+GSFH+V Sbjct: 885 PDSSQPGGL*AMKLMSCTCLTLSKPMIRTNASGYAFLASSSSLSTWVASVHPNMGSFHMV 706 Query: 294 QYRPS*YPGELLCSRKT 244 QY PS*YPG+L SR T Sbjct: 705 QYLPS*YPGDLWFSR*T 655 Score = 57.9 bits (120), Expect(4) = 3e-47 Identities = 23/27 (85%), Positives = 25/27 (92%) Frame = -3 / -2 Query: 123 TGRPAVDLSPWKGATVVADEAITAGAM 43 TG PAVDLSPWKGATVVAD+AIT GA+ Sbjct: 344 TGMPAVDLSPWKGATVVADDAITEGAI 264 Score = 42.8 bits (87), Expect(4) = 3e-47 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = -2 / -3 Query: 244 EGWQVRQGLELLDTLNRPHLH 182 E WQV +GLELLD LNRPHL+ Sbjct: 571 ERWQVGEGLELLDALNRPHLN 509 Score = 29.5 bits (58), Expect(4) = 3e-47 Identities = 11/13 (84%), Positives = 11/13 (84%) Frame = -1 / -3 Query: 188 PACT*SFRHC*PC 150 PACT*S RHC* C Sbjct: 412 PACT*SCRHC*RC 374 Score = 57.0 bits (118), Expect(5) = 1e-33 Identities = 23/29 (79%), Positives = 24/29 (82%) Frame = +1 / +1 Query: 385 LRPYHRLRQPAAGAVRQLHRLQATGLRGV 471 +RPYHRLRQ AGA QLHRLQA GLRGV Sbjct: 796 IRPYHRLRQRQAGAAHQLHRLQAPGLRGV 882 Score = 46.9 bits (96), Expect(5) = 1e-33 Identities = 17/21 (80%), Positives = 19/21 (90%) Frame = +1 / +3 Query: 46 GPRRDGFVGYHRRTLPGAQVH 108 GP RDG VG+HRR+LPGAQVH Sbjct: 267 GPLRDGVVGHHRRSLPGAQVH 329 Score = 45.5 bits (93), Expect(5) = 1e-33 Identities = 18/28 (64%), Positives = 24/28 (85%) Frame = +1 / +1 Query: 244 RLP*AQQLPRVLRRPILDNVEAAYVRMH 327 RLP* Q+PR+LR +LD+VEAA+VR+H Sbjct: 655 RLP*EPQIPRILRWQVLDHVEAAHVRVH 738 Score = 40.9 bits (83), Expect(5) = 1e-33 Identities = 16/20 (80%), Positives = 16/20 (80%) Frame = +3 / +3 Query: 186 RCGRLRVSRSSRPCLTCHPS 245 RCGRLR SRSSRP TCH S Sbjct: 513 RCGRLRASRSSRPSPTCHRS 572 Score = 25.8 bits (50), Expect(5) = 1e-33 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = +1 / +3 Query: 163 WRKDQVHAG 189 WR+DQVHAG Sbjct: 387 WRQDQVHAG 413 Score = 49.2 bits (101), Expect(4) = 1e-26 Identities = 24/34 (70%), Positives = 26/34 (76%) Frame = -1 / -2 Query: 473 RTPRNPVA*RR*S*RTAPAAGCRSR*YGRKRQGT 372 +TPR+P A RR*S* APA CRSR*YGR QGT Sbjct: 884 QTPRSPGACRR*S**AAPA*RCRSR*YGRMHQGT 783 Score = 47.8 bits (98), Expect(4) = 1e-26 Identities = 20/31 (64%), Positives = 22/31 (70%) Frame = -1 / -2 Query: 335 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRR 243 WR+C RT AAST SS RS RG C +HGRR Sbjct: 746 WRQCTRTWAASTWSSTCHRSIRGICGSHGRR 654 Score = 43.2 bits (88), Expect(4) = 1e-26 Identities = 17/20 (85%), Positives = 17/20 (85%) Frame = -1 / -3 Query: 104 T*APGRVRRW*PTKPSRRGP 45 T*APGR RRW PT PSRRGP Sbjct: 325 T*APGRERRWWPTTPSRRGP 266 Score = 40.5 bits (82), Expect(4) = 1e-26 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = -3 / -1 Query: 255 SRKTRGGK*DRVSNFLIPSIGHT 187 S GG+*+RVSNFL+PSIGHT Sbjct: 582 SSTVSGGR*ERVSNFLMPSIGHT 514 Score = 38.2 bits (77), Expect(3) = 1e-07 Identities = 16/21 (76%), Positives = 19/21 (90%) Frame = +1 / +1 Query: 178 VHAGVAD*GYQEVRDPVLLAT 240 V+ GVAD*G+QEVRDP+L AT Sbjct: 505 VYLGVAD*GHQEVRDPLLPAT 567 Score = 32.7 bits (65), Expect(3) = 1e-07 Identities = 13/18 (72%), Positives = 15/18 (83%) Frame = +3 / +3 Query: 417 GRCSASASSPSGHRVARS 470 GRCS+SASSP+ R ARS Sbjct: 828 GRCSSSASSPTSPRAARS 881 Score = 25.8 bits (50), Expect(3) = 1e-07 Identities = 9/12 (75%), Positives = 9/12 (75%) Frame = +3 / +3 Query: 300 CGSCLCSDAPTP 335 CGSC CS A TP Sbjct: 711 CGSCPCSGALTP 746 Score = 39.6 bits (80), Expect(2) = 3e-06 Identities = 20/35 (57%), Positives = 20/35 (57%) Frame = -2 / -3 Query: 505 AIVSPRSLCLAGLLATRWPEGDEADALHLPQVVEA 401 AI L LLA R GDEAD LHLP VVEA Sbjct: 916 AIYDDDGLVATRLLAARGLVGDEADELHLPDVVEA 812 Score = 34.1 bits (68), Expect(2) = 3e-06 Identities = 17/30 (56%), Positives = 19/30 (63%) Frame = -1 / -2 Query: 275 TRGSCCAHGRRGVASKTGSRTS*YPQSATP 186 TR + R VA + GSRTS* PQSATP Sbjct: 602 TRSASGGPPR*AVAGRRGSRTS*CPQSATP 513
>LOC_Os02g05830:12002.t00481:unspliced-genomic ribulose bisphosphate carboxylase small chain SSU40B, chloroplast| precursor, putative, expressed Length = 1519 Score = 131 bits (280), Expect(3) = 8e-32 Identities = 45/76 (59%), Positives = 59/76 (77%) Frame = +2 / +3 Query: 245 VFREHNSSPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQV 424 + R ++ PGYYDGRYWT+WKLPMFGC+DA VL EVEE ++EYPDA++R+I FD+ RQ Sbjct: 756 IHRSNSRMPGYYDGRYWTLWKLPMFGCSDAAAVLREVEECRREYPDAFIRLIAFDSSRQC 935 Query: 425 QCVSFIAFRPPGCEES 472 QC+SF+ +PP S Sbjct: 936 QCMSFVVHKPPSAAAS 983 Score = 26.3 bits (51), Expect(3) = 8e-32 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +3 / +3 Query: 183 CRCGRLRVSRSSRPCLTCHP 242 CR G L + +R CLTC P Sbjct: 465 CRHGTLSPTGGTRRCLTCLP 524 Score = 23.1 bits (44), Expect(3) = 8e-32 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = +2 / +1 Query: 140 ASLGRVSNGGRIRCMQV 190 A G SNG R CMQV Sbjct: 262 ARRGAASNGFRTYCMQV 312 Score = 68.4 bits (143), Expect = 5e-11 Identities = 37/74 (50%), Positives = 40/74 (54%) Frame = -3 / -1 Query: 471 DSSQPGGLKAMKLTHCTCRRLSKPMIRT*ASGYXXXXXXXXXXTCVASVHPNIGSFHIVQ 292 +++ GGL K H R LSK M R ASGY T AS HPNIGSFH VQ Sbjct: 982 EAAADGGLWTTKDMHWHWRLLSKAMRRMKASGYSLRHSSTSRSTAAASEHPNIGSFHSVQ 803 Query: 291 YRPS*YPGELLCSR 250 Y PS*YPG L R Sbjct: 802 YLPS*YPGIRLLLR 761 Score = 35.0 bits (70), Expect = 0.61 Identities = 17/28 (60%), Positives = 18/28 (64%) Frame = -1 / -2 Query: 332 RRCIRT*AASTLSSIGRRSTRGSCCAHG 249 R+ IRT AAST SS RRST S C G Sbjct: 843 RQSIRTSAASTASSTSRRSTPASGCCSG 760 Score = 28.6 bits (56), Expect(2) = 3.2 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = +1 / +2 Query: 274 VLRRPILDNVEAAYVRM 324 VLRR +LD VEAA VRM Sbjct: 785 VLRREVLDAVEAADVRM 835 Score = 24.4 bits (47), Expect(2) = 3.2 Identities = 7/12 (58%), Positives = 11/12 (91%) Frame = +2 / +2 Query: 209 KKFETLSYLPPL 244 +++E +SYLPPL Sbjct: 491 RRYEAMSYLPPL 526
>LOC_Os06g07110:12006.t00595:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4674 Score = 34.1 bits (68), Expect(2) = 0.60 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = +3 / +2 Query: 414 CGRCSASASSPSGHRVAR 467 C RC AS SSP+GHR+ R Sbjct: 4583 CRRCWASTSSPTGHRIRR 4636 Score = 23.1 bits (44), Expect(2) = 0.60 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +2 / +3 Query: 197 IEGIKKFETLSYLPPLVFREHN 262 I+GI F+ +SY P + EH+ Sbjct: 3477 IKGIHGFKLISYAPGMDQSEHH 3542
>LOC_Os08g17540:12008.t01624:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 643 Score = 35.0 bits (70), Expect = 0.61 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 / -2 Query: 414 CGRCSASASSPSGHRVARSPARHKLRGETMAY 509 C RC AS SSP+GH A + H L+ + Y Sbjct: 123 CRRCWASTSSPTGHVAATANRHHHLQRKLSTY 28
>LOC_Os03g62860:12003.t05513:unspliced-genomic glucan endo-1,3-beta-glucosidase A6 precursor, putative, expressed| Length = 2477 Score = 29.9 bits (59), Expect(2) = 0.84 Identities = 14/40 (35%), Positives = 21/40 (52%) Frame = +2 / +3 Query: 122 VSRRSSASLGRVSNGGRIRCMQVWPIEGIKKFETLSYLPP 241 V RR +A+ G G R+R +Q P +G + L +PP Sbjct: 915 VRRRHAAAAGDAHAGVRVRAVQRGPQDGARHGAALGPVPP 1034 Score = 25.8 bits (50), Expect(2) = 0.84 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = +2 / +2 Query: 5 CSRHPPLYS*YSTMAPAVMASSATTVAPFQGLKST 109 CSR PP S ++ P+ + SS ++ AP ST Sbjct: 506 CSRRPPGCSAPTSPTPSCVRSSPSSSAPTPTSSST 610
>LOC_Os06g09090:12006.t00788:unspliced-genomic glutamate receptor 2.8 precursor, putative, expressed| Length = 3830 Score = 34.5 bits (69), Expect = 0.84 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = -1 / +3 Query: 311 AASTLSSIGRRSTRGSCCAHGRRGVASKTGSRTS*YPQSATPACT*SFRHC*PC 150 AAS LS+ R R + + RRG ++ G+R + A PAC H PC Sbjct: 66 AASALSAEAARRGRTATVSAVRRGGTTEAGARRREGRRRAIPACPCRLHHVRPC 227
>LOC_Os06g08910:12006.t00770:unspliced-genomic glutamate receptor 2.8 precursor, putative, expressed| Length = 4481 Score = 34.5 bits (69), Expect = 0.84 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = -1 / +3 Query: 311 AASTLSSIGRRSTRGSCCAHGRRGVASKTGSRTS*YPQSATPACT*SFRHC*PC 150 AAS LS+ R R + + RRG ++ G+R + A PAC H PC Sbjct: 66 AASALSAEAARRGRTATVSAVRRGGTTEAGARRREGRRRAIPACPCRLHHVRPC 227
>LOC_Os09g34320:12009.t03008:unspliced-genomic expressed protein| Length = 1781 Score = 34.1 bits (68), Expect = 1.2 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = -1 / +2 Query: 329 RCIRT*AASTLSSIGRRSTRGSCCAHGRRGVASKTGSRTS 210 RC R +AST S+ GRRS S RR A + R+S Sbjct: 830 RCPRPSSASTTSAAGRRSATASAATSRRRATAMRCCCRSS 949
>LOC_Os07g11500:12007.t01023:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2526 Score = 34.1 bits (68), Expect = 1.2 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = +3 / +3 Query: 414 CGRCSASASSPSGHRVAR 467 C RC AS SSP+GHR+ R Sbjct: 2244 CRRCWASTSSPTGHRIRR 2297
>LOC_Os05g26550:12005.t02309:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1215 Score = 34.1 bits (68), Expect = 1.2 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = +3 / +3 Query: 414 CGRCSASASSPSGHRVAR 467 C RC AS SSP+GHR+ R Sbjct: 180 CRRCWASTSSPTGHRIRR 233
>LOC_Os01g03050:12001.t00197:unspliced-genomic fruit protein PKIWI502, putative, expressed| Length = 2679 Score = 34.1 bits (68), Expect = 1.2 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = -1 / +1 Query: 299 LSSIGRRSTRGSCCAHGRRGVASKTGSRTS*YP 201 LSS R +T S C+ GRR AS T +RT+ P Sbjct: 97 LSSSPRPATSSSTCSSGRRRAASTTSARTTSLP 195
>LOC_Os11g07680:12011.t00659:unspliced-genomic dirigent-like protein pDIR7, putative, expressed| Length = 727 Score = 27.2 bits (53), Expect(2) = 1.2 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = +3 / -2 Query: 423 CSASASSPSGHRVARSPAR 479 C + SPSG R SPAR Sbjct: 372 CPSGGRSPSGRRTCTSPAR 316 Score = 26.3 bits (51), Expect(2) = 1.2 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +3 / -2 Query: 183 CRCGRLRVSRSSRP 224 CRCGR R +RSS P Sbjct: 408 CRCGRRR*TRSSCP 367
>LOC_Os08g14280:12008.t01303:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1488 Score = 33.6 bits (67), Expect = 1.6 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = +3 / +3 Query: 414 CGRCSASASSPSGHRVAR 467 C RC AS SSP+GHR+ R Sbjct: 1080 CCRCWASTSSPTGHRIRR 1133
>LOC_Os02g22380:12002.t02026:unspliced-genomic glycosyltransferase, putative, expressed| Length = 3342 Score = 27.6 bits (54), Expect(2) = 2.0 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = -1 / +3 Query: 329 RCIRT*AASTLSSIGRRSTRGSCCAHGRRGVASKTGSRTS*YPQS 195 R R +AS ++ STR C RRG + T + TS P++ Sbjct: 1530 RSTRRCSASCPTTTSSTSTRTPACTASRRGTSVCTATATSSSPRT 1664 Score = 27.2 bits (53), Expect(2) = 2.0 Identities = 8/12 (66%), Positives = 10/12 (83%) Frame = -1 / +3 Query: 59 SRRGPWYCINCR 24 SRR PW+C +CR Sbjct: 1977 SRRRPWWCRSCR 2012
>LOC_Os07g40920:12007.t03751:unspliced-genomic APO2, putative, expressed| Length = 1459 Score = 33.1 bits (66), Expect = 2.2 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 / +2 Query: 284 RRSTRGSCCAHGRRGVASKTGSRTS*YPQSATPAC 180 RR TR +C RRG +S + + T+ SA+P C Sbjct: 482 RRGTRCTCGGQARRGTSSASPTATTCSTASASPGC 586
>LOC_Os07g32880:12007.t02969:unspliced-genomic ATP synthase gamma chain, chloroplast precursor, putative,| expressed Length = 1613 Score = 31.8 bits (63), Expect(2) = 2.5 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = -1 / +3 Query: 92 GRVRRW*PTKPSRRGPWYC 36 GR RRW P PSRR W C Sbjct: 396 GRRRRWCPPAPSRRRWWRC 452 Score = 21.7 bits (41), Expect(2) = 2.5 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -1 / +3 Query: 329 RCIRT*AASTLSSIGRRSTR 270 RC+ AAST + RRS R Sbjct: 303 RCVSCGAASTRCATRRRSRR 362
>LOC_Os06g10320:12006.t00910:unspliced-genomic hypothetical protein| Length = 1204 Score = 32.7 bits (65), Expect = 3.0 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = -3 / +1 Query: 654 CRRC*NLHMHICCTTYARTYTDHREENYALV 562 C R N+ MH + Y R YTD+RE + V Sbjct: 172 CMRHANIEMHTVPSIYMRAYTDYRESRASYV 264
>LOC_Os02g35450:12002.t03183:unspliced-genomic DNA-repair protein XRCC3, putative| Length = 873 Score = 26.3 bits (51), Expect(2) = 3.5 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = +2 / +2 Query: 8 SRHPPLYS*YSTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 145 S PP + + AP+ ASS P +S A P R SSAS Sbjct: 101 SSPPPAPASSPSAAPSSTASSPAASRPPPSPRSPASPPPGRPSSAS 238 Score = 25.8 bits (50), Expect(2) = 3.5 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +3 / +2 Query: 417 GRCSASASSPSGHRVARSP 473 GR S+++SSPS R RSP Sbjct: 218 GRPSSASSSPSSPRSPRSP 274
>LOC_Os11g31060:12011.t02706:unspliced-genomic BAG domain containing protein, expressed| Length = 1617 Score = 32.2 bits (64), Expect = 4.1 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = -1 / -3 Query: 293 SIGRRSTRGSCCAHGRRGVASKTGSRTS*YPQSATPACT*SFR 165 S GRRS RG C+ RRG + + T+ +S + +C S R Sbjct: 154 STGRRSRRGRRCSSSRRGRSRRIDETTTPLMRSPSFSCPFSIR 26
>LOC_Os11g04310:12011.t00324:unspliced-genomic cytochrome P450 94A2, putative| Length = 1548 Score = 32.2 bits (64), Expect = 4.1 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = -1 / +2 Query: 338 VWRRCIRT*AASTLSSIGRRSTRGSCCAHGRRGVASKTGSRT 213 VW R T AAS + RR +R SC RR +S S T Sbjct: 578 VWWRSGMTRAASPTAGSWRRPSRSSCTTSARRWTSSSAASWT 703
>LOC_Os04g34170:12004.t03092:unspliced-genomic extensin precursor, putative, expressed| Length = 1799 Score = 32.2 bits (64), Expect = 4.1 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -1 / -1 Query: 335 WRRCIRT*AASTLSSIGRRSTRGSCCAHGRRG 240 WRRC+ S L +GRRS G RRG Sbjct: 1103 WRRCVGRRRRSWLGGVGRRSRLGLRLVRRRRG 1008
>LOC_Os04g26140:12004.t02321:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 8938 Score = 29.9 bits (59), Expect(2) = 4.6 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +3 / +2 Query: 414 CGRCSASASSPSGHRVAR 467 C RC AS SSP+G V+R Sbjct: 1934 CHRCGASTSSPTGRLVSR 1987 Score = 24.9 bits (48), Expect(2) = 4.6 Identities = 8/10 (80%), Positives = 9/10 (90%) Frame = +3 / +1 Query: 183 CRCGRLRVSR 212 CRCGRLR+ R Sbjct: 1582 CRCGRLRLHR 1611
>LOC_Os07g36070:12007.t03279:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3502 Score = 30.4 bits (60), Expect(2) = 5.0 Identities = 12/18 (66%), Positives = 14/18 (77%) Frame = +3 / -2 Query: 414 CGRCSASASSPSGHRVAR 467 C RC ASASSP+G V+R Sbjct: 375 CRRCWASASSPTGRLVSR 322 Score = 23.1 bits (44), Expect(2) = 5.0 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +2 / -1 Query: 197 IEGIKKFETLSYLPPLVFREHN 262 I+GI F+ +SY P + EH+ Sbjct: 1837 IKGIHGFKLISYAPGMDQSEHH 1772
>LOC_Os12g11430:12012.t01018:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5279 Score = 30.9 bits (61), Expect(2) = 5.3 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +3 / +1 Query: 414 CGRCSASASSPSGHRVAR 467 C RC AS SSP+GH V R Sbjct: 4921 CCRCWASTSSPTGHLVRR 4974 Score = 23.1 bits (44), Expect(2) = 5.3 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +2 / +3 Query: 197 IEGIKKFETLSYLPPLVFREHN 262 I+GI F+ +SY P + EH+ Sbjct: 3465 IKGIHGFKLISYAPGMDQSEHH 3530
>LOC_Os07g01380:12007.t00037:unspliced-genomic peroxidase 1 precursor, putative| Length = 1431 Score = 29.9 bits (59), Expect(2) = 5.5 Identities = 11/42 (26%), Positives = 20/42 (47%) Frame = +3 / -1 Query: 570 HNFLLYDLCMYEHRLCSIYAYVNSSTAYTYPTPVSYLSLPNN 695 +N L ++ H +CS + + + YT P++Y P N Sbjct: 972 YNMTFIILLIFRHSICSGFIWRSMHVLYTSDRPLNYSRRPRN 847 Score = 22.1 bits (42), Expect(2) = 5.5 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = +3 / -3 Query: 708 NSVGKKKKKY 737 NS+ KKK+KY Sbjct: 517 NSISKKKRKY 488
>LOC_Os10g39980:12010.t03243:unspliced-genomic citrate transporter family protein, expressed| Length = 2591 Score = 31.8 bits (63), Expect = 5.7 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -1 / +2 Query: 284 RRSTRGSCCAHGRRGVASKTGSRTS*YPQSATPACT 177 RRST GSC A G S SRT ++P C+ Sbjct: 869 RRSTGGSCSARSTGGSCSSRASRTWSPSACSSPTCS 976
>LOC_Os10g01984:12010.t00094:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 15035 Score = 31.8 bits (63), Expect = 5.7 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +3 / -1 Query: 429 ASASSPSGHRVARSPARHKLRGETMAYVV*RSSVNFT 539 A+ SSP G R + K RGET+ Y++ +S+V + Sbjct: 13124 ATRSSPRGSRNSTESGDIKFRGETLYYLILQSTVQMS 13014
>LOC_Os08g22210:12008.t02002:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1543 Score = 31.8 bits (63), Expect = 5.7 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +3 / +2 Query: 414 CGRCSASASSPSGHRVAR 467 C RC AS SSP+GH V R Sbjct: 182 CRRCWASTSSPTGHLVCR 235
>LOC_Os04g28480:12004.t02545:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 6333 Score = 31.8 bits (63), Expect = 5.7 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +3 / +1 Query: 561 RLEHNFLLYDLCMYEHRLCSIYAYVNSSTAYTY 659 R++HN +L +CM + +C Y+ S + TY Sbjct: 6043 RVDHNMILLYICMTDTSMCFARVYLASIVSQTY 6141
>LOC_Os02g57950:12002.t05366:unspliced-genomic hypothetical protein| Length = 490 Score = 31.8 bits (63), Expect = 5.7 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = -3 / -3 Query: 639 NLHMHICCTTYARTYTDHR 583 +LH H C TY YT HR Sbjct: 185 SLHTHTCINTYMHAYTSHR 129
>LOC_Os02g08400:12002.t00736:unspliced-genomic HLS1, putative, expressed| Length = 1599 Score = 31.8 bits (63), Expect = 5.7 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -1 / -3 Query: 284 RRSTRGSCCAHGRRGVASKTGSRTS*YPQSAT 189 RR+TRG+ A RRG RT * PQ+ T Sbjct: 1207 RRATRGAAAARRRRGS*GSAWRRTR*APQTTT 1112
>LOC_Os04g46970:12004.t04224:unspliced-genomic cis-zeatin O-glucosyltransferase, putative, expressed| Length = 5077 Score = 30.4 bits (60), Expect(2) = 6.8 Identities = 20/59 (33%), Positives = 27/59 (45%) Frame = +2 / -1 Query: 17 PPLYS*YSTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSSASLGRVSNGGRIRCMQVW 193 PPL S S+MA + + T++ G T L +RSSAS G G+ R W Sbjct: 3931 PPLESMASSMASWMSFAGVTSLCFSHGRTRTPALRYLQRSSASHGWSQCMGQARISYPW 3755 Score = 23.1 bits (44), Expect(2) = 6.8 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +3 / -2 Query: 570 HNFLLYDLCMYEHRLCSIYAYVN 638 H F+ Y+L YE L + Y+N Sbjct: 2349 HPFIAYELDGYEKFLKKLTRYIN 2281
>LOC_Os03g13840:12003.t01177:unspliced-genomic ERD7, putative, expressed| Length = 3798 Score = 28.1 bits (55), Expect(2) = 7.1 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -1 / -1 Query: 272 RGSCCAHGRRGVASKTGSR 216 RG CC GRRG A++ R Sbjct: 498 RGPCCGRGRRGGAARPEPR 442 Score = 24.9 bits (48), Expect(2) = 7.1 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -1 / -1 Query: 665 CWICVGGARIYICIY 621 C++CV ARI + IY Sbjct: 3015 CFVCVDSARISVFIY 2971
>LOC_Os04g48930:12004.t04409:unspliced-genomic ferric-chelate reductase, putative, expressed| Length = 2794 Score = 29.5 bits (58), Expect(2) = 7.3 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -1 / -2 Query: 332 RRCIRT*AASTLSSIGRRSTRGSCC 258 RRC R AA +S+ TRG CC Sbjct: 2466 RRCRRRGAAGLATSLPTTGTRGCCC 2392 Score = 23.1 bits (44), Expect(2) = 7.3 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -1 / -1 Query: 251 GRRGVASKTGSRTS*YPQSATPACT 177 GRRG A + +RTS ++A P+ T Sbjct: 1435 GRRGGARRRRARTSGAGRAAAPSPT 1361
>LOC_Os12g38320:12012.t03513:unspliced-genomic expressed protein| Length = 1253 Score = 31.3 bits (62), Expect = 7.8 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 / +1 Query: 417 GRCSASASSPSGHRVARSPARHKLRGETMA 506 GR S+ +++P G AR PAR + RG + A Sbjct: 547 GRRSSRSATPGGASSARRPARRRWRGSSSA 636
>LOC_Os11g36390:12011.t03186:unspliced-genomic replication factor C subunit 1, putative, expressed| Length = 9860 Score = 31.3 bits (62), Expect = 7.8 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = +2 / -3 Query: 119 PVSRRSSASLGRVSNGGRIRCMQVWPIEGIKKFETLSYLPPLVFREHNSSPGYYDGR 289 P+SR S+ +LG GG R + P + + S L L R H+ G +GR Sbjct: 333 PMSR*SAGALGFKVGGGSERASEPIPASSLPPSDLTSLLGALPRRSHHRMLGGMEGR 163
>LOC_Os10g01670:12010.t00064:unspliced-genomic hypothetical protein| Length = 1026 Score = 31.3 bits (62), Expect = 7.8 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 / +2 Query: 420 RCSASASSPSGHRVARSPARHKLRGETMA 506 RC A +SSPSG R RSP G ++A Sbjct: 374 RCGAGSSSPSGPRPWRSPEIATAAGRSLA 460
>LOC_Os08g08830:12008.t00769:unspliced-genomic expressed protein| Length = 9400 Score = 31.3 bits (62), Expect = 7.8 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = +2 / +2 Query: 38 STMAPAVMASSATTVAPFQGLKSTAGLPVSRRSSASLGRVSNGGRIRCMQV 190 S +P+ +S +T +G T P SRR SL S+GG CM + Sbjct: 332 SPSSPSSPSSPGSTRPSPRGGSPTPSAPASRRLLFSLSPPSSGGLFACMYI 484
>LOC_Os06g32630:12006.t02961:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 4623 Score = 31.3 bits (62), Expect = 7.8 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +3 / +2 Query: 414 CGRCSASASSPSGHRVAR 467 C RC AS SSP+GH V R Sbjct: 4520 CRRCWASTSSPTGHLVRR 4573
>LOC_Os03g35600:12003.t03045:unspliced-genomic serine/threonine-protein kinase receptor precursor, putative,| expressed Length = 4572 Score = 31.3 bits (62), Expect = 7.8 Identities = 16/35 (45%), Positives = 18/35 (51%) Frame = -1 / -2 Query: 476 CRTPRNPVA*RR*S*RTAPAAGCRSR*YGRKRQGT 372 CR PR RR S RT + GC S R+R GT Sbjct: 1073 CRPPRTGSMPRRPSTRTGSSGGCSS*GSARRRTGT 969
>LOC_Os02g54910:12002.t05069:unspliced-genomic expressed protein| Length = 4288 Score = 31.3 bits (62), Expect = 7.8 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = +2 / -3 Query: 236 PPLVFREHNSSPGYYDGRYWTMWKL 310 PP N+ P Y GR+W W+L Sbjct: 398 PPTYENRANNVPRQYGGRFWPTWRL 324
>LOC_Os02g52830:12002.t04863:unspliced-genomic triacylglycerol lipase, putative, expressed| Length = 4209 Score = 31.3 bits (62), Expect = 7.8 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = -1 / -3 Query: 329 RCIRT*AASTLSSIGRRSTRGSCCAHGRRGVASKTGSRTS*YPQSATPA 183 RC R ++ RRS+ G + RRG + GSRT+ P+ T A Sbjct: 1960 RCRRRLRRRWVAPASRRSSAGPAPS*SRRGPCRRRGSRTTRSPRRRTTA 1814
>LOC_Os01g64960:12001.t05862:unspliced-genomic photosystem II 22 kDa protein, chloroplast precursor, putative,| expressed Length = 2975 Score = 31.3 bits (62), Expect = 7.8 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -1 / +3 Query: 311 AASTLSSIGRRSTRGSCCAHGRRGVASKTGSR 216 A + S GRR +RGSCC RR ++ SR Sbjct: 384 APAGCSPCGRRRSRGSCCRSRRRRWGARCPSR 479
>LOC_Os01g63810:12001.t05749:unspliced-genomic starch binding domain containing protein, expressed| Length = 2644 Score = 31.3 bits (62), Expect = 7.8 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -1 / +2 Query: 305 STLSSIGRRSTRGSCCAHGRRGVASKTGSRTS 210 STL + R+ T SCC G R ++ + S TS Sbjct: 542 STLQFLRRQCTSNSCCKSGARSGSASSSSATS 637
>LOC_Os01g54300:12001.t04847:unspliced-genomic hydrolase, hydrolyzing O-glycosyl compounds, putative, expressed| Length = 2449 Score = 31.3 bits (62), Expect = 7.8 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 / +2 Query: 335 WRRCIRT*AASTLSSIGRRSTRGS 264 WRRC+RT* ST S+ + RGS Sbjct: 1289 WRRCLRT*NRSTRSTSSPSAPRGS 1360
>LOC_Os01g08470:12001.t00725:unspliced-genomic protein binding protein, putative, expressed| Length = 2275 Score = 26.7 bits (52), Expect(2) = 8.2 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +2 / +2 Query: 11 RHPPLYS*YSTMAPAVMASSATTVAPFQGLKSTAGLPVSRRSSAS 145 R P S + A +SAT +P ++TA SRR+SA+ Sbjct: 698 RSTPSSSTTTASASTSRTTSATRRSPSSSSRTTASAAASRRASAT 832 Score = 25.4 bits (49), Expect(2) = 8.2 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = +3 / +2 Query: 426 SASASSPSGHRVARSPARHKLRGET 500 S + SSP+ R AR+P R G T Sbjct: 1076 SRTTSSPASRRPARTPCRATATGGT 1150
>LOC_Os08g02310:12008.t00126:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2618 Score = 29.0 bits (57), Expect(2) = 9.3 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = +3 / -1 Query: 414 CGRCSASASSPSGHRVAR 467 C RC AS SSP+G V R Sbjct: 707 CRRCQASTSSPTGRLVRR 654 Score = 23.1 bits (44), Expect(2) = 9.3 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +2 / -2 Query: 197 IEGIKKFETLSYLPPLVFREHN 262 I+GI F+ +SY P + EH+ Sbjct: 919 IKGIHGFKLISYAPGMDQSEHH 854 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 282,879,435 Number of extensions: 4475219 Number of successful extensions: 22869 Number of sequences better than 10.0: 50 Length of query: 245 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 196 Effective length of database: 52,856,264 Effective search space: 10359827744 Effective search space used: 10359827744 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
