ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf55b12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 549 bits (277), Expect = e-153 Identities = 401/440 (91%), Gaps = 8/440 (1%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 1022 tcgtcttccgtgagcacaacagctcctccgggtactacgacggtcgatactggacaatgt 1081 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 1082 ggaagctgcctatgttcgggtgcaccgacgccacgcaggtgctcaacgaggtggaggagg 1141 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 1142 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 1201 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggcat 482 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| | Sbjct: 1202 tgcagtgcgtcagcttcatcgcattcaggccaccgggttgcgaggagtctggcaaggcct 1261 Query: 483 aaactacgaggtgaaacaatggcctatgtcgtatgaaggtcttctgtgaacttcactttt 542 |||||||||| | |||||||||||||| |||||| ||||| |||||||||||||||| Sbjct: 1262 aaactacgagttaaaacaatggcctat---gtatgattgtcttttgtgaacttcactttt 1318 Query: 543 gtccatgactctgctttccgactagagcataatttt-cttctctatgatctgtgtatgta 601 ||||| |||||||||| ||||| |||||||| |||| |||| |||||||||||| |||| Sbjct: 1319 gtccaggactctgcttcccgaccagagcatatttttccttcggtatgatctgtgtttgta 1378 Query: 602 cgagcataggttgtgcagcatatatgcatatgtaaattctagcaccgcctacacatatcc 661 ||| ||||||||||| ||| |||||||||||||||||||||||| |||||||||| | Sbjct: 1379 cgaacataggttgtggagc----atgcatatgtaaattctagcaccggctacacatatac 1434 Query: 662 aacacctgtgtcatatttat 681 |||||| |||| |||||||| Sbjct: 1435 aacaccagtgtgatatttat 1454 Score = 335 bits (169), Expect = 1e-88 Identities = 375/440 (85%), Gaps = 9/440 (2%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||| | |||||| |||||||| || ||| ||||| |||||| || Sbjct: 5426 tcgtcttccgtgagcacaataactcccctgggtactatgatggctgataccggacaaagt 5485 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||| ||||||||||||| ||||| ||||||||||||||||| || ||||||||||||| Sbjct: 5486 ggaagttgcctatgttcgggtgcactgacgccacacaggtgctcaaggaggtggaggagg 5545 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||||||||||| ||||| || |||| ||||| ||||||||||||| || | |||| Sbjct: 5546 tcaagaaggagtaccttgacggctatgtccttatcaacggcttcgacaacatgtgccagg 5605 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggcat 482 |||| ||||||| |||||| ||||||| | |||| ||| ||||||||||||||||| | Sbjct: 5606 tgcattgcgtcactttcatcaccttcagtctaccgacttgtgaggagtccggcaaggcct 5665 Query: 483 aaactacgaggtgaaacaatggcctatgtcgtatgaaggtcttctgtgaacttcactttt 542 | |||| ||| |||||||||||||||| ||| ||||||||| |||||||||||||||| Sbjct: 5666 agactatgagttgaaacaatggcctat---gtacgaaggtcttttgtgaacttcactttt 5722 Query: 543 gtccatgactctgctttccgactagagcataattttc-ttctctatgatctgtgtatgta 601 |||| |||||||| | || || |||||||| ||||| |||| ||| || |||||||||| Sbjct: 5723 ctccacgactctgc-tgcctaccagagcatatttttcgttctgtataatatgtgtatgta 5781 Query: 602 cgagcataggttgtgcagcatatatgcatatgtaaattctagcaccgcctacacatatcc 661 ||| ||| ||||||| ||| ||||| ||||||||||||||| | |||||||||| | Sbjct: 5782 cgaacattggttgtggagc----gtgcatgtgtaaattctagcactgactacacatatac 5837 Query: 662 aacacctgtgtcatatttat 681 ||||||| ||| |||||||| Sbjct: 5838 aacacctatgtgatatttat 5857 Score = 303 bits (153), Expect = 5e-79 Identities = 177/185 (95%) Strand = Plus / Plus Query: 5 tgtagccggcatcctcctctctacagttaatacagtaccatggcccccgccgtgatggct 64 ||||||||||||||||||||| | | ||||||| ||||||||||||||||||||||||| Sbjct: 587 tgtagccggcatcctcctctcctccgataatacaataccatggcccccgccgtgatggct 646 Query: 65 tcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctccccgtc 124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 tcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctccccgtc 706 Query: 125 agccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatcaggtgcatg 184 |||||||||||||||| |||||||||| | |||||||||||||||||||||||||||||| Sbjct: 707 agccgccgctccagcggcagcctcggccgcgtcagcaatggcggaaggatcaggtgcatg 766 Query: 185 caggt 189 ||||| Sbjct: 767 caggt 771 Score = 194 bits (98), Expect = 3e-46 Identities = 185/214 (86%) Strand = Plus / Plus Query: 248 ttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaag 307 |||||||||| ||| || ||||| |||||||| ||| || ||||| |||||||||||| Sbjct: 4088 ttccgtgagcgcaataggtcccctgggtactatgaccgctaatactaaacaatgtggaag 4147 Query: 308 ctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtcaag 367 || ||||| || || ||||||||| ||| ||||||| || |||||||||||||||||| Sbjct: 4148 ctacctatctttgggtgcaccgacaccaagaaggtgctcaaggaggtggaggaggtcaag 4207 Query: 368 aaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgcag 427 ||||||||||||||||| || ||| | ||||||||||||||||||||||| |||||| || Sbjct: 4208 aaggagtaccctgacgcctatgtctgcatcatcggcttcgacaacctgcgccaggtgtag 4267 Query: 428 tgcgtcagcttcatcgccttcaggccaccgggtt 461 ||||||||||||||| ||||| ||||||| |||| Sbjct: 4268 tgcgtcagcttcatcaccttcgggccacctggtt 4301 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 880 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 939 Score = 101 bits (51), Expect = 3e-18 Identities = 110/128 (85%), Gaps = 5/128 (3%) Strand = Plus / Plus Query: 528 gtgaacttcacttttgtccatgactctgctttccgactagagcataa-ttttcttctcta 586 ||||||||||||||| |||| |||||||||||||||| ||||||| |||| |||| || Sbjct: 4358 gtgaacttcacttttctccacgactctgctttccgacctaagcataatttttgttctgta 4417 Query: 587 tgatctgtgtatgtacgagcataggttgtgcagcatatatgcatatgtaaattctagcac 646 |||||||||||||||| | ||||||||||| ||| |||||| |||||| |||||||| Sbjct: 4418 tgatctgtgtatgtacaaacataggttgtggagc----atgcatgtgtaaactctagcac 4473 Query: 647 cgcctaca 654 || ||||| Sbjct: 4474 cggctaca 4481 Score = 67.9 bits (34), Expect = 5e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 191 tggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||| ||| ||||| || |||||||| ||||||||||||||||||||||||||| Sbjct: 5290 tggctgatcgagggcatgaagaagtttgagaccctgtcttacttgccacccctc 5343 Score = 58.0 bits (29), Expect = 5e-05 Identities = 53/60 (88%), Gaps = 2/60 (3%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 ||||| |||||||| ||||| |||||||||||||||| |||||| |||||||| ||||| Sbjct: 3943 caggtttggccgatcgagggcatcaagaagttcgagatcctgtc--acttgccatccctc 4000
>gb|DQ245093.1| Zea mays clone 12935 mRNA sequence Length = 803 Score = 478 bits (241), Expect = e-131 Identities = 289/305 (94%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 326 tcgtcttccgtgagcacaacagctcccccgggtactacgacggtcgatactggacaatgt 385 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 386 ggaagctgcctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggagg 445 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 446 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 505 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggcat 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 506 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggcct 565 Query: 483 aaactacgaggtgaaacaatggcctatgtcgtatgaaggtcttctgtgaacttcactttt 542 |||||| ||| |||||||||||||||| || ||||||| |||| |||||| ||||||||| Sbjct: 566 aaactatgagttgaaacaatggcctatctcatatgaagatcttttgtgaatttcactttt 625 Query: 543 gtcca 547 ||||| Sbjct: 626 gtcca 630 Score = 367 bits (185), Expect = 4e-98 Identities = 228/241 (94%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 5 tgtagccggcatcctcctctctacagttaatacag-taccatggcccccgccgtgatggc 63 ||||||||||||||||||||| | | ||||||| |||||||||||||||||||||||| Sbjct: 3 tgtagccggcatcctcctctcctccgataatacaaataccatggcccccgccgtgatggc 62 Query: 64 ttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctccccgt 123 ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| Sbjct: 63 ttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggcctgcccgt 122 Query: 124 cagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatcaggtgcat 183 ||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||| Sbjct: 123 cagccgccgctccagcggcagcctcggcagcgtcagcaacggcggaaggatcaggtgcat 182 Query: 184 gcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccct 243 |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 183 gcaggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccct 242 Query: 244 c 244 | Sbjct: 243 c 243 Score = 44.1 bits (22), Expect = 0.70 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 549 gactctgctttccgactagagcata-attttcttctctatgatctgtgtatgta 601 |||||||||||||||| ||||||| |||| |||| |||||| |||||||||| Sbjct: 646 gactctgctttccgaccggagcataccttttgttctatatgatttgtgtatgta 699
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 478 bits (241), Expect = e-131 Identities = 289/305 (94%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 1268 tcgtcttccgtgagcacaacagctctcccgggtactacgacggtcgatactggacaatgt 1327 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 1328 ggaagctgcctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggagg 1387 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 1388 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 1447 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggcat 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1448 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggcct 1507 Query: 483 aaactacgaggtgaaacaatggcctatgtcgtatgaaggtcttctgtgaacttcactttt 542 |||||| ||| |||||||||||||||| || ||||||| |||| |||||||||||||||| Sbjct: 1508 aaactatgagttgaaacaatggcctatctcatatgaagatcttttgtgaacttcactttt 1567 Query: 543 gtcca 547 ||||| Sbjct: 1568 gtcca 1572 Score = 258 bits (130), Expect = 2e-65 Identities = 173/186 (93%), Gaps = 1/186 (0%) Strand = Plus / Plus Query: 5 tgtagccggcatcctcctctctacagttaatacag-taccatggcccccgccgtgatggc 63 ||||||||||||||||||||| | | ||||||| |||||||||||||||||||||||| Sbjct: 656 tgtagccggcatcctcctctcctccgataatacaaataccatggcccccgccgtgatggc 715 Query: 64 ttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctccccgt 123 ||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 716 ttcgtcggctaccaccgtcgcacccttccagggtctcaagtccacagccggcctgcccgt 775 Query: 124 cagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatcaggtgcat 183 ||||||||||||||| | |||||||||||| |||||||| |||||||||||||||||||| Sbjct: 776 cagccgccgctccaggggcagcctcggcagcgtcagcaacggcggaaggatcaggtgcat 835 Query: 184 gcaggt 189 |||||| Sbjct: 836 gcaggt 841 Score = 95.6 bits (48), Expect = 2e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 ||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1126 caggtgtggccaattgagggcatcaagaagtttgagaccctgtcttacttgccacccctc 1185 Score = 44.1 bits (22), Expect = 0.70 Identities = 47/54 (87%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 549 gactctgctttccgactagagcata-attttcttctctatgatctgtgtatgta 601 |||||||||||||||| ||||||| |||| |||| |||||| |||||||||| Sbjct: 1588 gactctgctttccgaccggagcataccttttgttctatatgatttgtgtatgta 1641
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 448 bits (226), Expect = e-122 Identities = 226/226 (100%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 439 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 499 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 559 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 605 Score = 260 bits (131), Expect = 6e-66 Identities = 134/135 (99%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcgccagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 119 bits (60), Expect = 1e-23 Identities = 60/60 (100%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 385 bits (194), Expect = e-103 Identities = 227/238 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||| Sbjct: 277 tcgtcttccgtgagcacaatagctcccccggatactatgacggtcgatactggacaatgt 336 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 337 ggaagctgcctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggagg 396 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 397 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 456 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggc 514 Score = 226 bits (114), Expect = 9e-56 Identities = 173/192 (90%), Gaps = 3/192 (1%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||| ||||| ||| ||||||||||||||||||| |||||||| || | ||| Sbjct: 3 gtgatggcttcctcggccacctccgtcgcacccttccagggtctcaagtcgaccgacggc 62 Query: 116 ctccccgtcagccgccgctccagc---gccagcctcggcagggtcagcaatggcggaagg 172 || ||| ||||||||||||||||| ||| ||||| |||| |||||||| ||||||||| Sbjct: 63 ctgcccatcagccgccgctccagcagcgccggcctcagcagcgtcagcaacggcggaagg 122 Query: 173 atcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttac 232 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 123 atcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttac 182 Query: 233 ttgccacccctc 244 ||||||||||| Sbjct: 183 ctgccacccctc 194
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 385 bits (194), Expect = e-103 Identities = 218/226 (96%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 562 tcgtcttccgtgagcacaacagctcccccgggtactacgacggtcgatactggacaatgt 621 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 622 ggaagctgcctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggagg 681 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 682 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 741 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 787 Score = 236 bits (119), Expect = 9e-59 Identities = 131/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 || |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 61 cctgcccgtcagccgccgctccagcggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 103 bits (52), Expect = 9e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 385 bits (194), Expect = e-103 Identities = 218/226 (96%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 438 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 439 ggaagctgcctatgttcgggtgcaccgacgccacgcaggtgctcaacgaggtggaggagg 498 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 499 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 558 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 604 Score = 236 bits (119), Expect = 9e-59 Identities = 131/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 385 bits (194), Expect = e-103 Identities = 227/238 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 397 tcgtcttccgtgagcacaacagctcctccgggtactacgacggtcgatactggacaatgt 456 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 457 ggaagctgcctatgttcgggtgcaccgacgccacgcaggtgctcaacgaggtggaggagg 516 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 517 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 576 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggc 480 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 577 tgcagtgcgtcagcttcatcgcattcaggccaccgggttgcgaggagtccggcaaggc 634 Score = 266 bits (134), Expect = 1e-67 Identities = 143/146 (97%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 60 Query: 104 tccacagccggtctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaat 163 ||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||| Sbjct: 61 tccacagccggtctccccgtcagccgccgctccagcggcagcctcggccgcgtcagcaat 120 Query: 164 ggcggaaggatcaggtgcatgcaggt 189 |||||||||||||||||||||||||| Sbjct: 121 ggcggaaggatcaggtgcatgcaggt 146 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 255 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 314
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 377 bits (190), Expect = e-101 Identities = 217/226 (96%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 556 tcgtcttccgtgagcacaacagctcccccgggtactacgacggtcgatactggacaatgt 615 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct: 616 ggaagctgcccatgtttgggtgcaccgacgccacacaggtgctcaacgaggtggaggagg 675 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||||||||||||||| |||| Sbjct: 676 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 735 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 781 Score = 244 bits (123), Expect = 4e-61 Identities = 132/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgttgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 61 tctccccgtcagccgccgctccagcgccagcctcggcagcgtcagcaatgggggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 95.6 bits (48), Expect = 2e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 377 bits (190), Expect = e-101 Identities = 217/226 (96%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 621 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||||| Sbjct: 622 ggaagctgcctatgttcgggtgcactgacgccacacaggtgctgatcgaggtggaggagg 681 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||||||||||||||| |||| Sbjct: 682 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 741 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 742 tgcagtgcgtcagcttcatcgcctttaggccaccgggttgcgagga 787 Score = 228 bits (115), Expect = 2e-56 Identities = 130/135 (96%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||| ||||||||||||||| ||||||| |||| |||||||||||||||||||| Sbjct: 61 tctccccgtcggccgccgctccagcggcagcctcagcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 186 aggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccct 243 |||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccct 478
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 377 bits (190), Expect = e-101 Identities = 217/226 (96%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 621 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 622 ggaagctgcctatgttcgggtgcactgacgccacacaggtgctgaacgaggtggaggagg 681 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||||||||||||||| |||| Sbjct: 682 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 741 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 742 tgcagtgcgtcagcttcatcgcctataggccaccgggttgcgagga 787 Score = 228 bits (115), Expect = 2e-56 Identities = 130/135 (96%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||| ||||||||||||||| ||||||| |||| |||||||||||||||||||| Sbjct: 61 tctccccgtcggccgccgctccagcggcagcctcagcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 186 aggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccct 243 |||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccct 478
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 377 bits (190), Expect = e-101 Identities = 217/226 (96%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 562 tcgtcttccgtgagcactacagctcccccgggtactacgacggtcgatactggacaatgt 621 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 622 ggaagctgcctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggagg 681 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 682 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 741 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 787 Score = 236 bits (119), Expect = 9e-59 Identities = 131/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 || |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 61 cctgcccgtcagccgccgctccagcggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 103 bits (52), Expect = 9e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 377 bits (190), Expect = e-101 Identities = 217/226 (96%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 556 tcgtcttccgtgagcacaacagctcccccgggtactacgacggtcgatactggacaatgt 615 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 616 ggaagctgcccatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggagg 675 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 676 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 735 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 781 Score = 244 bits (123), Expect = 4e-61 Identities = 132/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccaccgccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 95.6 bits (48), Expect = 2e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 377 bits (190), Expect = e-101 Identities = 217/226 (96%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 567 tcgtcttccgtgagcacaacagctcccccggatactacgatggtcgatactggacaatgt 626 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 627 ggaagctgcctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggagg 686 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||||||||||||||| |||| Sbjct: 687 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 746 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 792 Score = 236 bits (119), Expect = 9e-59 Identities = 131/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1 cgtgatggcctcgtcggctaccaccgtcgcacccttccaggggctcaagtcgacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcgccagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||| ||||||||| Sbjct: 121 caggtacatgcaggt 135 Score = 103 bits (52), Expect = 9e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 377 bits (190), Expect = e-101 Identities = 217/226 (96%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 567 tcgtcttccgtgagcacaacagctcccccggatactacgatggtcgatactggacaatgt 626 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 627 ggaagctgcctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggagg 686 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||||||||||||||| |||| Sbjct: 687 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 746 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 792 Score = 252 bits (127), Expect = 2e-63 Identities = 133/135 (98%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtcgacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcgccagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 103 bits (52), Expect = 9e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 377 bits (190), Expect = e-101 Identities = 217/226 (96%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 562 tcgtcttccgtgagcacaacagctcccccgggtactacgacggtcgatactggacaatgt 621 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| Sbjct: 622 ggaagctgcctatgttcgggtgcaccgacgccacacaggtgctcagcgaggtggaggagg 681 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||||||||||||||| || || |||||| |||||||||||||||||||||| |||| Sbjct: 682 tcaagaaggagtaccctgatgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 741 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 787 Score = 260 bits (131), Expect = 6e-66 Identities = 134/135 (99%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcgccagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 420 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 377 bits (190), Expect = e-101 Identities = 217/226 (96%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 380 tcgtcttccgtgagcacaacagctcccccgggtactacgacggtcgatactggacaatgt 439 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| |||||||| ||||||| Sbjct: 440 ggaagctgcctatgttcgggtgcaccgacgccacgcaggtgctcaacgaggttgaggagg 499 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||| Sbjct: 500 tcaagaaggagtaccctgacgcttatgtccgcgtcatcggcttcgacaacctgcgccagg 559 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 605 Score = 244 bits (123), Expect = 4e-61 Identities = 132/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 119 bits (60), Expect = 1e-23 Identities = 60/60 (100%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 377 bits (190), Expect = e-101 Identities = 217/226 (96%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 438 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 439 ggaagctccctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggagg 498 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||| ||||||||||| |||| Sbjct: 499 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggctttgacaacctgcgccagg 558 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 559 tgcagtgcgtcagcttcagcgccttcaggccaccgggttgcgagga 604 Score = 220 bits (111), Expect = 5e-54 Identities = 129/135 (95%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggcagcctcggccgcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 369 bits (186), Expect = 1e-98 Identities = 216/226 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct: 379 tcgtcttccgtgagcacaacagctcccccggatactacgacggccgatactggactatgt 438 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||| Sbjct: 439 ggaagctgcctatgttcgggtgcaccgacgccacgcaggtgctcagcgaggtggaggagg 498 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||||||||||||||| |||| Sbjct: 499 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 558 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 604 Score = 236 bits (119), Expect = 9e-59 Identities = 131/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggcagcctcggccgcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 119 bits (60), Expect = 1e-23 Identities = 63/64 (98%) Strand = Plus / Plus Query: 181 catgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 233 catgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacc 292 Query: 241 cctc 244 |||| Sbjct: 293 cctc 296
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 369 bits (186), Expect = 1e-98 Identities = 216/226 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 441 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct: 442 ggaagctgcctatgttcgggtgcaccgacgccacgcaggtgctcaacgaggtggaggagg 501 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 502 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 561 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 ||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 562 tgcagtgcgtcagcttcatcgcctttaggccaccaggttgcgagga 607 Score = 244 bits (123), Expect = 4e-61 Identities = 132/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 240 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 299
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 369 bits (186), Expect = 1e-98 Identities = 216/226 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 445 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||| Sbjct: 446 ggaagctgcctatgttcgggtgcaccgacgccacgcaggtgctcaatgaggtggaggagg 505 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 506 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgtcagg 565 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 566 tgcagtgcgtcagcttcatcgcctttaggccaccgggttgcgagga 611 Score = 236 bits (119), Expect = 9e-59 Identities = 131/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggcagcctcggccgcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 244 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 303
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 369 bits (186), Expect = 1e-98 Identities = 216/226 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||| Sbjct: 380 tcgtcttccgtgagcacaacagctcccccggatactacgatggtcgatactggacaatgt 439 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 440 ggaagctgcctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggagg 499 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 500 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 559 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 605 Score = 244 bits (123), Expect = 4e-61 Identities = 132/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 238 caggtgtggccgattgagggtatcaagaaattcgagaccctgtcttacttgccacccctc 297
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 369 bits (186), Expect = 1e-98 Identities = 225/238 (94%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct: 744 tcgttttccgtgagcacaacagctcccccgggtactacgatggtcgatactggacaatgt 803 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||| Sbjct: 804 ggaagctgcctatgttcgggtgcaccgacgctacacaggtgctcaacgaggtggaggagg 863 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| ||||||||||||||||||| || |||| Sbjct: 864 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctacgccagg 923 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggc 480 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 924 tgcagtgcgtcagcttcattgccttcaggccaccgggttgcgaggagtccggcaaggc 981 Score = 165 bits (83), Expect = 3e-37 Identities = 133/149 (89%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||||| ||||||||||| ||||| ||| ||||||||||||||||||| |||||| Sbjct: 1 atggcccccgctgtgatggcttcctcggccacctccgtcgcacccttccagggtctcaag 60 Query: 104 tccacagccggtctccccgtcagccgccgctc---cagcgccagcctcggcagggtcagc 160 || || ||||| || ||||||||||||||||| ||||||| ||||| |||| |||||| Sbjct: 61 tcgaccgccggcctgcccgtcagccgccgctccagcagcgccggcctcagcagcgtcagc 120 Query: 161 aatggcggaaggatcaggtgcatgcaggt 189 || |||||||||||||||||||||||||| Sbjct: 121 aacggcggaaggatcaggtgcatgcaggt 149 Score = 103 bits (52), Expect = 9e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 602 caggtgtggccgattgagggcatcaagaagttcgagactctgtcttacttgccacccctc 661
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 369 bits (186), Expect = 1e-98 Identities = 225/238 (94%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 388 tcgtcttccgtgagcacaacagctctcccgggtactacgacggtcgatactggacaatgt 447 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||||| Sbjct: 448 ggaagctgcctatgttcgggtgcaccgacgccacgcaagtgctcaacgaggtggaggagg 507 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||||||||||||||| || || |||||| ||| |||||||||||||||||| |||| Sbjct: 508 tcaagaaggagtaccctgatgcctatgtccgtgtcaacggcttcgacaacctgcgccagg 567 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggc 480 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 568 tgcagtgcgtcagcttcatcgccttcaggccaccaggttgcgaggagtccggcaaggc 625 Score = 228 bits (115), Expect = 2e-56 Identities = 140/146 (95%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 60 Query: 104 tccacagccggtctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaat 163 |||||||||||||| |||||||||||||||||||||| ||||||||| | |||| |||| Sbjct: 61 tccacagccggtctgcccgtcagccgccgctccagcg--agcctcggccgcgtca-caat 117 Query: 164 ggcggaaggatcaggtgcatgcaggt 189 |||||||||||||||||||||||||| Sbjct: 118 ggcggaaggatcaggtgcatgcaggt 143 Score = 119 bits (60), Expect = 1e-23 Identities = 60/60 (100%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 305
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 361 bits (182), Expect = 2e-96 Identities = 215/226 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||||||||||||||||||||||||| || ||||| ||||| |||||||||||||||| Sbjct: 503 tcgtcttccgtgagcacaacagctcccctggttactatgacggtcgatactggacaatgt 562 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 563 ggaagctgcctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggagg 622 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 623 tcaagaaggagtaccctgacgcgtatgtccgcgtcatcggcttcgacaacctgcgccagg 682 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 683 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 728 Score = 252 bits (127), Expect = 2e-63 Identities = 133/135 (98%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 95.6 bits (48), Expect = 2e-16 Identities = 57/60 (95%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 ||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 361 caggtgtggccaattgagggcatcaagaagttcgagaccctatcttacttgccacccctc 420
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 361 bits (182), Expect = 2e-96 Identities = 215/226 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 547 tcgtcttccgtgagcacaacagctctcccgggtactacgacggtcgatactggacaatgt 606 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||| Sbjct: 607 ggaagctgcctatgttcgggtgcaccgacgccacgcaggtgctcagcgaggtggaggagg 666 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||||||||||||||| |||| Sbjct: 667 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 726 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 727 tgcagtgcgtcagcttcatcgccttcaggccaccaggttgcgagga 772 Score = 236 bits (119), Expect = 9e-59 Identities = 131/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 61 tctccccgtcggccgccgctccagcggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Plus Query: 186 aggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccct 243 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 406 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccct 463
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 361 bits (182), Expect = 2e-96 Identities = 215/226 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 380 tcgtcttccgtgagcacaacagctcccccgggtactacgacggacgatactggacaatgt 439 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||| ||||||||||| |||||||||||||| |||||||| |||||||| ||||||| Sbjct: 440 ggaagctacctatgttcgggtgcaccgacgccacgcaggtgctcaacgaggttgaggagg 499 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 500 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 559 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 605 Score = 252 bits (127), Expect = 2e-63 Identities = 133/135 (98%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtcgacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcgccagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 119 bits (60), Expect = 1e-23 Identities = 60/60 (100%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 361 bits (182), Expect = 2e-96 Identities = 215/226 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 380 tcgtcttccgtgagcacaacagctcccccgggtactacgacggacgatactggacaatgt 439 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||| ||||||||||| |||||||||||||| |||||||| |||||||| ||||||| Sbjct: 440 ggaagctacctatgttcgggtgcaccgacgccacgcaggtgctcaacgaggttgaggagg 499 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 500 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 559 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 605 Score = 244 bits (123), Expect = 4e-61 Identities = 132/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 119 bits (60), Expect = 1e-23 Identities = 60/60 (100%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 361 bits (182), Expect = 2e-96 Identities = 215/226 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 380 tcgtcttccgtgagcacaacagctcccccgggtactacgacggacgatactggacaatgt 439 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||| ||||||||||| |||||||||||||| |||||||| |||||||| ||||||| Sbjct: 440 ggaagctacctatgttcgggtgcaccgacgccacgcaggtgctcaacgaggttgaggagg 499 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 500 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 559 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 605 Score = 244 bits (123), Expect = 4e-61 Identities = 132/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 119 bits (60), Expect = 1e-23 Identities = 60/60 (100%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 361 bits (182), Expect = 2e-96 Identities = 215/226 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 379 tcgtcttccgtgagcacaacagctctcccgggtactacgacggtcgatactggacaatgt 438 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||| Sbjct: 439 ggaagctgcctatgttcgggtgcaccgacgccacgcaggtgctcagcgaggtggaggagg 498 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||||||||||||||| |||| Sbjct: 499 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 558 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 559 tgcagtgcgtcagcttcatcgccttcaggccaccaggttgcgagga 604 Score = 220 bits (111), Expect = 5e-54 Identities = 129/135 (95%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggcagcctcggccgcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 359 bits (181), Expect = 9e-96 Identities = 211/221 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 563 tcgtcttccgtgagcacaacagctcccccgggtactacgatagtcgatactggacaatgt 622 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||| Sbjct: 623 ggaagctgcctatgttcggttgcaccgacgccacacaggtgctcaatgaggtggaggagg 682 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||||||||||||||| |||| Sbjct: 683 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 742 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgc 463 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgc 783 Score = 220 bits (111), Expect = 5e-54 Identities = 129/135 (95%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1 cgtgatggcttcgtcggctaccagcgtcgcacccttccaggggctcaagtccacaggcgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||||| ||||||||||| | |||||||||||| |||||||||||||||||||| Sbjct: 61 tctccccgtcagtcgccgctccagaggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 103 bits (52), Expect = 9e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 421 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 480
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 353 bits (178), Expect = 6e-94 Identities = 211/222 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 564 tcgtcttccgtgagcacaacagctctcccgggtactacgacggtcgatactggacaatgt 623 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| || ||||||||||||| Sbjct: 624 ggaagctgcctatgttcgggtgcaccgacgccactcaggtgctcaatgaggtggaggagg 683 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 684 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 743 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcg 464 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcg 785 Score = 228 bits (115), Expect = 2e-56 Identities = 130/135 (96%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 1 cgtgatggcttcctcggctaccagcgtcgcacccttccaggggctcaagtccacggccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 103 bits (52), Expect = 9e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 422 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 481
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 353 bits (178), Expect = 6e-94 Identities = 214/226 (94%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 380 tcgtcttccgtgagcacaacagctctcccgggtactacgacggtcgatactggacaatgt 439 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||||| Sbjct: 440 ggaagctgcctatgttcgggtgcaccgacgccacgcaagtgctcaacgaggtggaggagg 499 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||||||||||||||| || || |||||| |||||||||||||||||||||| |||| Sbjct: 500 tcaagaaggagtaccctgatgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 559 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 560 tgcagtgcgtcagcttcatcgccttcaggccaccaggttgcgagga 605 Score = 236 bits (119), Expect = 9e-59 Identities = 131/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||| |||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggcagcctcggccgcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 119 bits (60), Expect = 1e-23 Identities = 60/60 (100%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 353 bits (178), Expect = 6e-94 Identities = 214/226 (94%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 380 tcgtcttccgtgagcacaacagctctcccgggtactacgacggtcgatactggacaatgt 439 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||||| Sbjct: 440 ggaagctgcctatgttcgggtgcaccgacgccacgcaagtgctcaacgaggtggaggagg 499 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||||||||||||||| || || |||||| |||||||||||||||||||||| |||| Sbjct: 500 tcaagaaggagtaccctgatgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 559 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 560 tgcagtgcgtcagcttcatcgccttcaggccaccaggttgcgagga 605 Score = 236 bits (119), Expect = 9e-59 Identities = 131/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 ||| |||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 61 tctgcccgtcagccgccgctccagcggcagcctcggccgcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 119 bits (60), Expect = 1e-23 Identities = 60/60 (100%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 353 bits (178), Expect = 6e-94 Identities = 214/226 (94%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 379 tcgtcttccgtgagcacaacagctctcccgggtactacgacggtcgatactggacaatgt 438 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||| Sbjct: 439 ggaagctgcctatgttcgggtgcaccgacgccacgcaggtgctcagcgaggtggaggagg 498 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||||||||||||||| |||| Sbjct: 499 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 558 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 559 tgcagtgcgtcagcttcatcgccttcaggccaccaggttgggagga 604 Score = 220 bits (111), Expect = 5e-54 Identities = 129/135 (95%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggcagcctcggccgcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 353 bits (178), Expect = 6e-94 Identities = 214/226 (94%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 379 tcgtcttccgtgagcacaacagctctcccgggtactacgacggtcgatactggacaatgt 438 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||| Sbjct: 439 ggaagctgcctatgttcgggtgcaccgacgccacgcaggtgctcagcgaggtggaggagg 498 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||| ||||||| || |||||| |||||||||||||||||||||| |||| Sbjct: 499 tcaagaaggagtactctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 558 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 559 tgcagtgcgtcagcttcatcgccttcaggccaccaggttgcgagga 604 Score = 220 bits (111), Expect = 5e-54 Identities = 129/135 (95%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggcagcctcggccgcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 353 bits (178), Expect = 6e-94 Identities = 214/226 (94%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 379 tcgtcttccgtgagcacaacagctctcccgggtactacgacggtcgatactggacaatgt 438 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||| Sbjct: 439 ggaagctgcctatgttcgggtgcaccgacgccacgcaggtgctcagcgaggtggaggagg 498 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||||||||||||||| |||| Sbjct: 499 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 558 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 ||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 559 tgcagtgcgtcagtttcatcgccttcaggccaccaggttgcgagga 604 Score = 220 bits (111), Expect = 5e-54 Identities = 129/135 (95%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggcagcctcggccgcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 353 bits (178), Expect = 6e-94 Identities = 214/226 (94%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 379 tcgtcttccgtgagcacaacagctctcccgggtactacgacggtcgatactggacaatgt 438 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||| Sbjct: 439 ggaagctgcctatgttcgggtgcaccgacgccacgcaggtgctcagcgaggtggaggagg 498 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||||||||||||||| |||| Sbjct: 499 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggcttcgacaacctgcgccagg 558 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 ||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 559 tgcagtgcgtcagtttcatcgccttcaggccaccaggttgcgagga 604 Score = 220 bits (111), Expect = 5e-54 Identities = 129/135 (95%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcacacccttccacgggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 61 tctccccgtcagccgccgctccagcggcagcctcggccgcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 351 bits (177), Expect = 2e-93 Identities = 225/241 (93%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||| Sbjct: 376 tcttccgtgagcacaacgcgtctcccgggtactacgatggccggtactggacaatgtgga 435 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 |||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 436 agctgcctatgttcgggtgcaccgacgccacacaggtgatcaacgaggtggaggaggtca 495 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| |||||||| |||||||| ||||||||| |||| ||||||| Sbjct: 496 agaaggagtaccctgacgcgtacgtccgcatcatcggattcgacaacatgcgccaggtgc 555 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggcataaa 485 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 556 agtgcgtcagcttcatcgccttcaagccaccgggctgcgaggagtccggcaaggcataaa 615 Query: 486 c 486 | Sbjct: 616 c 616 Score = 242 bits (122), Expect = 1e-60 Identities = 181/200 (90%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 |||||||| |||||||||| |||||||| ||| ||||||| || ||||||||||||||| Sbjct: 87 atggcccctaccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctcaag 146 Query: 104 tccacagccggtctccccgtcagccgccgctcca---gcgccagcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| |||| ||||||||||| |||||| Sbjct: 147 tccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgtcagc 206 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 || || ||||||||||||||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 207 aacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgag 266 Query: 221 accctgtcttacttgccacc 240 |||||||||||||||||||| Sbjct: 267 accctgtcttacttgccacc 286
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 341 bits (172), Expect = 2e-90 Identities = 225/243 (92%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct: 354 tcgtcttccgtgagcacaacaactcccccgggtactacgacggtcgatactggacaatgt 413 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||| ||||||||||||| |||||||||||||| |||||||| || ||||||||||||| Sbjct: 414 ggaagttgcctatgttcgggtgcaccgacgccacgcaggtgctcaatgaggtggaggagg 473 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| ||||||||||||||||| |||| |||| Sbjct: 474 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacatgcgccagg 533 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggcat 482 ||||||||||||||||||| |||||||||||||| | |||||||| ||||||||||||| Sbjct: 534 tgcagtgcgtcagcttcattgccttcaggccaccangctgcgaggaatccggcaaggcat 593 Query: 483 aaa 485 ||| Sbjct: 594 aaa 596 Score = 262 bits (132), Expect = 2e-66 Identities = 188/206 (91%), Gaps = 3/206 (1%) Strand = Plus / Plus Query: 42 ccatggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctca 101 |||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||| Sbjct: 66 ccatggccccagccgtgatggcttcgtccgccaccaccgtcgcgcccttccaggggctca 125 Query: 102 agtccacagccggtctccccgtcagccgccgctcc---agcgccagcctcggcagggtca 158 |||| || ||||| ||||||||| ||||||||||| |||||| ||||| |||| |||| Sbjct: 126 agtcgaccgccggcctccccgtcggccgccgctccggcagcgccggcctcagcagcgtca 185 Query: 159 gcaatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcg 218 |||| |||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 186 gcaacggcggaaggatcagatgcatgcaggtgtggccaattgagggcatcaagaagttcg 245 Query: 219 agaccctgtcttacttgccacccctc 244 |||||||||||||||||||||||||| Sbjct: 246 agaccctgtcttacttgccacccctc 271
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 337 bits (170), Expect = 3e-89 Identities = 212/226 (93%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 366 tcgtcttccgcgagcacaacagctcccccggttactacgacggccggtactggacaatgt 425 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||| |||||||| |||||||| || ||||||||||||| Sbjct: 426 ggaagctgcctatgttcggctgcacggacgccactcaggtgctcaatgaggtggaggagg 485 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||||||||||||||||| |||| Sbjct: 486 tcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacctgcgccagg 545 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 546 tgcagtgcgtcagcttcatcgcctttaggccaccgggttgcgagga 591 Score = 232 bits (117), Expect = 1e-57 Identities = 129/133 (96%) Strand = Plus / Plus Query: 57 tgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtc 116 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 tgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtc 62 Query: 117 tccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatca 176 | |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 63 tgcccgtcagccgccgctccagcggcagcctcggcaacgtcagcaatggcggaaggatca 122 Query: 177 ggtgcatgcaggt 189 ||||||||||||| Sbjct: 123 ggtgcatgcaggt 135 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 224 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 283
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 337 bits (170), Expect = 3e-89 Identities = 221/238 (92%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 344 tcgtcttccgtgagcacaacagctcccccgggtactacgacggtcgatactggacaatgt 403 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 404 ggaagctgcctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggaggagg 463 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 | ||||||||||||||||| || || ||||| ||||||| ||||||||| |||| |||| Sbjct: 464 ttaagaaggagtaccctgatgcgtatgtccgcgtcatcggtttcgacaacatgcgccagg 523 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggc 480 |||| |||||||||||||| |||||||||||||| || |||||||| ||||||||||| Sbjct: 524 tgcaatgcgtcagcttcattgccttcaggccaccaggctgcgaggaatccggcaaggc 581 Score = 246 bits (124), Expect = 9e-62 Identities = 186/206 (90%), Gaps = 3/206 (1%) Strand = Plus / Plus Query: 42 ccatggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctca 101 |||||||||| |||||||||||||| || || ||||||||||| |||||||||||||||| Sbjct: 56 ccatggccccagccgtgatggcttcttccgccaccaccgtcgcgcccttccaggggctca 115 Query: 102 agtccacagccggtctccccgtcagccgccgctcc---agcgccagcctcggcagggtca 158 |||| || ||||| |||||| ||||| |||||||| ||| || ||||| |||| |||| Sbjct: 116 agtcgaccgccggcctccccatcagctgccgctccggcagcaccggcctcagcagcgtca 175 Query: 159 gcaatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcg 218 ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| Sbjct: 176 gcaatggcggaaggatcagatgcatgcaggtgtggccaattgagggcatcaagaagttcg 235 Query: 219 agaccctgtcttacttgccacccctc 244 |||||||||||||||||||||||||| Sbjct: 236 agaccctgtcttacttgccacccctc 261
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 335 bits (169), Expect = 1e-88 Identities = 223/241 (92%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 |||||||||||||||| || |||||||||||||||||||| |||||||||||||||| Sbjct: 104 tcttccgtgagcacaatgcgtctcccgggtactacgacggccgctactggacaatgtgga 163 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 |||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 164 agctgcctatgttcgggtgcaccgacgccacacaggtgatcaacgaggtggaggaggtca 223 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| |||||||| |||||||| ||||||||| |||| ||||||| Sbjct: 224 agaaggagtaccctgacgcgtacgtccgcatcatcggattcgacaacatgcgccaggtgc 283 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggcataaa 485 |||||||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||| Sbjct: 284 agtgcgtcagcttcattgccttcaagccaccgggctgcgaggagtccggcaaggcctaaa 343 Query: 486 c 486 | Sbjct: 344 c 344
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 323 bits (163), Expect = 5e-85 Identities = 217/235 (92%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 415 tcttccgtgagcacaacgcatcccctgggtactacgatggccggtactggacaatgtgga 474 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 |||||||||||||||| |||||||||||||| |||||| | ||||||||||||||||||| Sbjct: 475 agctgcctatgttcgggtgcaccgacgccacgcaggtgatcaacgaggtggaggaggtca 534 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || ||||| |||||||| ||||||||| |||| ||||||| Sbjct: 535 agaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgccaggtgc 594 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggc 480 |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 595 agtgcgtcagcttcatcgccttcaagccaccgggctgcgaggagtccggcaaggc 649 Score = 172 bits (87), Expect = 1e-39 Identities = 134/149 (89%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 |||||||||||||||||||| |||||||| ||| ||||||| || ||||||||||||||| Sbjct: 1 atggcccccgccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctcaag 60 Query: 104 tccacagccggtctccccgtcagccgccgctcca---gcgccagcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| |||| ||||||||||| |||||| Sbjct: 61 tccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgtcagc 120 Query: 161 aatggcggaaggatcaggtgcatgcaggt 189 || || |||||||||||| |||||||||| Sbjct: 121 aacggtggaaggatcaggcgcatgcaggt 149 Score = 67.9 bits (34), Expect = 5e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 ||||||||||||| || ||||| || |||||||||||||||||||| ||| ||||||| Sbjct: 268 tgcaggtgtggcccatcgagggcattaagaagttcgagaccctgtcctacctgccacc 325
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 319 bits (161), Expect = 8e-84 Identities = 221/241 (91%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||||||||||||| || || ||||||||||| ||||| |||||||||||||||| Sbjct: 310 tcttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtgga 369 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 370 agctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtca 429 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || ||||| |||||||| ||||||||| |||| ||||||| Sbjct: 430 agaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgc 489 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggcataaa 485 ||||||||||||||||||| |||| |||||| || ||| ||||||| ||||||||||||| Sbjct: 490 agtgcgtcagcttcatcgctttcaagccaccaggctgccaggagtcgggcaaggcataaa 549 Query: 486 c 486 | Sbjct: 550 c 550 Score = 206 bits (104), Expect = 8e-50 Identities = 172/192 (89%), Gaps = 2/192 (1%) Strand = Plus / Plus Query: 42 ccatggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctca 101 ||||||||||| |||||||||| || ||||| ||| ||||||| || ||||||||||||| Sbjct: 22 ccatggcccccaccgtgatggcctcatcggcaacctccgtcgctcctttccaggggctca 81 Query: 102 agtccacagccggtctccccgtcagccgccgctccagcgccagcctcgg-cagggtcagc 160 ||||||| ||||| || ||||||||||||||||||| ||| || ||||| ||| |||||| Sbjct: 82 agtccaccgccggccttcccgtcagccgccgctccaacgctag-ctcggccagcgtcagc 140 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 || || ||||||||||||||||||||||||||||| || ||||| ||||||||||||||| Sbjct: 141 aacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgag 200 Query: 221 accctgtcttac 232 |||||||||||| Sbjct: 201 accctgtcttac 212
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 317 bits (160), Expect = 3e-83 Identities = 184/192 (95%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 606 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||| Sbjct: 607 ggaagctgcctatgttcgggtgcaccgacgccacacaggtgctcagcgaggtggaggagg 666 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || |||||| |||||||||| ||||||||||| |||| Sbjct: 667 tcaagaaggagtaccctgacgcctatgtccgtgtcatcggctttgacaacctgcgccagg 726 Query: 423 tgcagtgcgtca 434 |||||||||||| Sbjct: 727 tgcagtgcgtca 738 Score = 236 bits (119), Expect = 9e-59 Identities = 131/135 (97%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgtgatggcttcctcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 |||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct: 61 tctccccgtcggccgccgctccagcggcagcctcggcagcgtcagcaatggcggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||||||||||||||| Sbjct: 121 caggtgcatgcaggt 135 Score = 111 bits (56), Expect = 4e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 405 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 464
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 307 bits (155), Expect = 3e-80 Identities = 215/235 (91%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||||||||||||| || || ||||||||||| ||||| || ||||||||||||| Sbjct: 501 tcttccgtgagcacaacgcatctcctgggtactacgatggccggtattggacaatgtgga 560 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 |||||||||||||||| ||||| ||||||||||||||| | ||||||||||||||||||| Sbjct: 561 agctgcctatgttcgggtgcactgacgccacacaggtgatcaacgaggtggaggaggtca 620 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || ||||| |||||||| ||||||||| |||| ||||||| Sbjct: 621 agaaggagtaccctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgc 680 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggc 480 |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 681 agtgcgtcagcttcatcgccttcaagccaccgggctgcgaggagtccggcaaggc 735 Score = 180 bits (91), Expect = 5e-42 Identities = 135/149 (90%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 |||||||||||||||||||| |||||||| ||| ||||||| || ||||||||||||||| Sbjct: 1 atggcccccgccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctcaag 60 Query: 104 tccacagccggtctccccgtcagccgccgctcca---gcgccagcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| |||| ||||||||||| |||||| Sbjct: 61 tccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgtcagc 120 Query: 161 aatggcggaaggatcaggtgcatgcaggt 189 || || ||||||||||||||||||||||| Sbjct: 121 aacggtggaaggatcaggtgcatgcaggt 149 Score = 83.8 bits (42), Expect = 8e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 ||||||||||||| || ||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 354 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacctgccacc 411
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 268 bits (135), Expect = 3e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| | ||||| |||||||||||| | |||||||||||||||| Sbjct: 275 tcttccgcgagcacggcagcactcccggatactacgacggcaggtactggacaatgtgga 334 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| |||||||||||| |||||||| | || |||||||||||||||| Sbjct: 335 agctgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggtggaggaggtca 394 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || ||||| |||||||||||||||||| | || ||||||| Sbjct: 395 agaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaggtgc 454 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 455 agtgcgtcagcttcatcgccttcaagccaccgggctgcgagga 497 Score = 184 bits (93), Expect = 3e-43 Identities = 162/185 (87%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||| ||||| ||| | ||||| |||||||||| |||||||||||| || || Sbjct: 1 gtgatggcttcttcggccacctcggtcgcgcccttccaggagctcaagtccactgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 || ||||||||||||||| || |||| |||| ||||| |||||||| || ||||| ||| Sbjct: 61 cttcccgtcagccgccgcagcaacgccggccttggcagcgtcagcaacggtggaagaatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 121 cgatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 236 ccacc 240 ||||| Sbjct: 181 ccacc 185
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 262 bits (132), Expect = 2e-66 Identities = 198/220 (90%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| | ||||| |||||||||||| | |||||||||||||||| Sbjct: 275 tcttccgcgagcacggcagcactcccggatactacgacggcaggtactggacaatgtgga 334 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| |||||||||||| |||||||| | || |||||||||||||||| Sbjct: 335 agctgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggtggaggaggtca 394 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || ||||| |||||||||||||||||| | || ||||||| Sbjct: 395 agaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaggtgc 454 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcga 465 |||||||||||||||||||||||| ||||||||| ||||| Sbjct: 455 agtgcgtcagcttcatcgccttcaagccaccgggctgcga 494 Score = 184 bits (93), Expect = 3e-43 Identities = 162/185 (87%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||| ||||| ||| | ||||| |||||||||| |||||||||||| || || Sbjct: 1 gtgatggcttcttcggccacctcggtcgcgcccttccaggagctcaagtccactgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 || ||||||||||||||| || |||| |||| ||||| |||||||| || ||||| ||| Sbjct: 61 cttcccgtcagccgccgcagcaacgccggccttggcagcgtcagcaacggtggaagaatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 121 cgatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 236 ccacc 240 ||||| Sbjct: 181 ccacc 185
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 258 bits (130), Expect = 2e-65 Identities = 202/226 (89%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 ||||||||||||||||||| || || || |||||||| ||||| ||||||||||||| Sbjct: 559 tcgtcttccgtgagcacaatgcatctcctggatactacgatggccgttactggacaatgt 618 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||| |||||||||||||||||||||| ||| |||||||| | || ||| ||||||||| Sbjct: 619 ggaagttgcctatgttcggatgcaccgatgcctcacaggtgatcaaggagctggaggagg 678 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||||||||||||||||| || ||||| |||||||| ||||| ||| |||| |||| Sbjct: 679 tcaagaaggagtaccctgacgcctatgtccgcatcatcggtttcgataacttgcgtcagg 738 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 739 tgcagtgcgtcagcttcatcgccttcaagccaccgggttgcgagga 784 Score = 137 bits (69), Expect = 6e-29 Identities = 116/131 (88%), Gaps = 3/131 (2%) Strand = Plus / Plus Query: 59 atggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtctc 118 |||||||||||||| ||| ||||||| ||||||||||| ||||||||||| ||||| || Sbjct: 5 atggcttcgtcggccacctccgtcgcgcccttccagggtctcaagtccaccgccggcctg 64 Query: 119 cccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatcagg 178 ||||||||||||||||||| | |||||||||| ||||||| ||||||||||||||| Sbjct: 65 cccgtcagccgccgctcca---ctggcctcggcagcgtcagcagcggcggaaggatcagg 121 Query: 179 tgcatgcaggt 189 ||||||||||| Sbjct: 122 tgcatgcaggt 132 Score = 103 bits (52), Expect = 9e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 244 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 417 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 476
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 256 bits (129), Expect = 1e-64 Identities = 204/229 (89%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| ||||||| |||||||||||| | |||||||||||||||| Sbjct: 357 tcttccgcgagcacggcagcacccccggatactacgacggcaggtactggacaatgtgga 416 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 || |||| |||||||| |||||||||||| |||||||| | || |||||||||||||||| Sbjct: 417 agttgcccatgttcgggtgcaccgacgcctcacaggtgatcaaggaggtggaggaggtca 476 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || ||||| |||||||||||||||||| | || || |||| Sbjct: 477 agaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagtgc 536 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccgg 474 |||||||||||||||||||||||| |||||| || |||||||| ||||| Sbjct: 537 agtgcgtcagcttcatcgccttcaagccaccaggctgcgaggaatccgg 585 Score = 123 bits (62), Expect = 9e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||| ||||| ||| ||||||| ||||||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcttcggccacctccgtcgcgcccttccagggcctcaagtccaccgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 || ||||||||||||||| | | ||||||||||||| |||||||| || ||||||||| Sbjct: 61 cttcccgtcagccgccgcagcgcctccagcctcggcagcgtcagcaacggtggaaggatc 120 Query: 176 aggtgcatgcaggt 189 || ||||||||||| Sbjct: 121 agatgcatgcaggt 134 Score = 93.7 bits (47), Expect = 8e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 186 aggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 213 aggtgtggccgattgagggcatcaagaagttcgagaccctttcttacttgccacc 267
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 254 bits (128), Expect = 4e-64 Identities = 184/202 (91%), Gaps = 3/202 (1%) Strand = Plus / Plus Query: 42 ccatggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctca 101 ||||||||||| |||||||||| |||||||| ||| ||||||| || ||||||||||||| Sbjct: 45 ccatggcccccaccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctca 104 Query: 102 agtccacagccggtctccccgtcagccgccgctcca---gcgccagcctcggcagggtca 158 ||||||| ||||| |||||||||||||||||||||| |||| ||||||||||| |||| Sbjct: 105 agtccaccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgtca 164 Query: 159 gcaatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcg 218 |||| || ||||||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 165 gcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggtatcaagaagttcg 224 Query: 219 agaccctgtcttacttgccacc 240 |||||||||| ||||||||||| Sbjct: 225 agaccctgtcctacttgccacc 246 Score = 224 bits (113), Expect = 3e-55 Identities = 209/241 (86%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 |||||||||| |||||| ||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 336 tcttccgtgaacacaacgtatcccctgggtactacgatggccggtactggacaatgtgga 395 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 | || ||||||||||||||| ||| | |||| |||||| | ||||||||||||||||| Sbjct: 396 aactccctatgttcggatgccccgcccccacccaggtgatccccgaggtggaggaggtca 455 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 |||||||||||||||| | || ||| |||||||| ||||||||| |||| ||||||| Sbjct: 456 ggaaggagtaccctgacccctattgccgcatcatcggattcgacaacatgcgtcaggtgc 515 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaaggcataaa 485 ||| ||||||||||||||||| || ||||||||| |||||||||||||||||||| |||| Sbjct: 516 agtccgtcagcttcatcgcctccaagccaccgggctgcgaggagtccggcaaggcctaaa 575 Query: 486 c 486 | Sbjct: 576 c 576
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 252 bits (127), Expect = 2e-63 Identities = 199/223 (89%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| ||||||| |||||||||||| | |||||||||||||||| Sbjct: 275 tcttccgcgagcacggcagcacccccggatactacgacggcaggtactggacaatgtgga 334 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| |||||||||||| ||||||| | || |||||||||||||||| Sbjct: 335 agctgcccatgttcgggtgcaccgacgcctcacaggtcatcaaggaggtggaggaggtca 394 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || ||||| |||||||||||||||||| | || || |||| Sbjct: 395 agaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagtgc 454 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||| ||||||||||||||||||| ||||||||| |||||||| Sbjct: 455 agtgtgtcagcttcatcgccttcaagccaccgggctgcgagga 497 Score = 216 bits (109), Expect = 8e-53 Identities = 166/185 (89%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 |||||||||||||| || |||||||||||||| |||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcgtccgccaccaccgtcgcaccattccagggcctcaagtccaccgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 |||||||||||||||||| | ||||||||||||||| |||||||| || ||||| ||| Sbjct: 61 ctccccgtcagccgccgcagctccgccagcctcggcagcgtcagcaacggtggaagaatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 || |||||||||||||||||||||||||| |||||||||||||||||||| |||||| || Sbjct: 121 agatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttcttacctg 180 Query: 236 ccacc 240 ||||| Sbjct: 181 ccacc 185
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 246 bits (124), Expect = 9e-62 Identities = 181/200 (90%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| |||||||||||| | ||||||||||||||||||||||| |||||||| |||||| Sbjct: 298 cccggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcacc 357 Query: 329 gacgccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttac 388 |||||| |||||||| | || ||||||||||||||||||||||||||||||||||| || Sbjct: 358 gacgcctcacaggtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctat 417 Query: 389 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttc 448 ||||| |||||||||||||||||| | || ||||||||||| |||||||||||||||||| Sbjct: 418 gtccgcatcatcggcttcgacaacatccgtcaggtgcagtgtgtcagcttcatcgccttc 477 Query: 449 aggccaccgggttgcgagga 468 | |||||| || |||||||| Sbjct: 478 aagccaccaggctgcgagga 497 Score = 192 bits (97), Expect = 1e-45 Identities = 163/185 (88%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||| ||||| ||| | ||||| ||||||||||||||||||||||| || || Sbjct: 1 gtgatggcttcttcggccacctcggtcgcgcccttccaggggctcaagtccactgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 || ||||||||||||||| || |||| |||| ||||| |||||||| || ||||| ||| Sbjct: 61 cttcccgtcagccgccgcagcaacgccggccttggcagcgtcagcaacggtggaagaatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 121 cgatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 236 ccacc 240 ||||| Sbjct: 181 ccacc 185
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 244 bits (123), Expect = 4e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| ||||||| |||||||||||| | |||||||||||||||| Sbjct: 371 tcttccgcgagcacggcagcacccccggatactacgacggcaggtactggacaatgtgga 430 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| |||||||||||| | ||||| | || |||||||||||||||| Sbjct: 431 agctgcccatgttcggctgcaccgacgcctcccaggtcatcaaggaggtggaggaggtca 490 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || ||||| |||||||||||||||||| | || || |||| Sbjct: 491 agaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagtgc 550 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||| |||||| || |||||||| Sbjct: 551 agtgcgtcagcttcatcgccttcaagccaccaggctgcgagga 593 Score = 107 bits (54), Expect = 6e-20 Identities = 114/134 (85%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 |||||||||||||| || ||| ||||||| || |||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcgtccgccacctccgtcgcgcctttccagggcctcaagtccacggcaggg 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 |||||||||||||||||| | | ||||||| ||||| |||||||| || ||||| ||| Sbjct: 61 ctccccgtcagccgccgcagcgcctccagcctgggcagcgtcagcaacggtggaagaatc 120 Query: 176 aggtgcatgcaggt 189 || ||||||||||| Sbjct: 121 agatgcatgcaggt 134 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 ||||||||||||| |||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 226 caggtgtggccgactgagggcatcaagaagttcgagaccctttcttacctgccacc 281
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 244 bits (123), Expect = 4e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| | ||||| |||||||||||| | |||||||||||||||| Sbjct: 275 tcttccgcgagcacggcagcactcccggatactacgacggcaggtactggacaatgtgga 334 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| |||||||||||| |||||||| | || ||||| |||||||||| Sbjct: 335 agctgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggttgaggaggtca 394 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || || || |||||||||||||||||| | || || |||| Sbjct: 395 agaaggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgtcaagtgc 454 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 455 agtgcgtcagcttcatcgccttcaagccaccgggctgcgagga 497 Score = 186 bits (94), Expect = 8e-44 Identities = 160/182 (87%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||| || || Sbjct: 1 gtgatggcttcttcggccaccacggtcgcgcccttccaggggctcaagtccactgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 || ||||||||||||||| || |||| |||| ||||| |||||||| || ||||| ||| Sbjct: 61 cttcccgtcagccgccgcagcaacgccggccttggcagcgtcagcaacggtggaagaatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 | ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| || Sbjct: 121 cgatgcatgcaggtgtggcctattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 236 cc 237 || Sbjct: 181 cc 182
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 244 bits (123), Expect = 4e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| | || || ||||| |||||| | |||||||||||||||| Sbjct: 275 tcttccgcgagcacggcagcactcctggatactatgacggcaggtactggacaatgtgga 334 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 |||| || ||||||||||||||||||||| | |||||| | || |||||||||||||||| Sbjct: 335 agctccccatgttcggatgcaccgacgcctcccaggtgatcaaggaggtggaggaggtca 394 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || ||||| |||||||||||||||||| | || ||||||| Sbjct: 395 agaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaggtgc 454 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 455 agtgcgtcagcttcatcgccttcaagccaccgggctgcgagga 497 Score = 192 bits (97), Expect = 1e-45 Identities = 163/185 (88%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||||||||| ||| | ||||| ||||||||||||||||||||||| || || Sbjct: 1 gtgatggcttcgtcggccacctcggtcgcgcccttccaggggctcaagtccactgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 || ||||||||||||||| || |||| |||| ||||| |||||||| || ||||| ||| Sbjct: 61 cttcccgtcagccgccgcagcaacgccggccttggcagcgtcagcaacggtggaagaatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 | ||||||||||||||||| |||||||| ||||||||||||||||||||||||||| || Sbjct: 121 cgatgcatgcaggtgtggcctattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 236 ccacc 240 ||||| Sbjct: 181 ccacc 185
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 240 bits (121), Expect = 6e-60 Identities = 202/229 (88%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| | ||||| |||||||||||| | |||||||||||||||| Sbjct: 391 tcttccgcgagcacggcagcactcccggatactacgacggcaggtactggacaatgtgga 450 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| ||||| |||||| |||||||| | || |||||||||||||||| Sbjct: 451 agctgcccatgttcggctgcactgacgcctcacaggtgatcaaggaggtggaggaggtca 510 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || || || |||||||||||||||||| | || || |||| Sbjct: 511 agaaggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgtcaagtgc 570 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccgg 474 ||||||||||||||||||| |||| ||||||||| |||||||| ||||| Sbjct: 571 agtgcgtcagcttcatcgcattcaagccaccgggctgcgaggaatccgg 619 Score = 139 bits (70), Expect = 2e-29 Identities = 118/134 (88%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||| || || ||| ||||||| ||||||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcttccgccacctccgtcgcgcccttccagggcctcaagtccaccgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 |||||||||||||||||| || ||| |||||||||| |||||||| |||||||||||| Sbjct: 61 ctccccgtcagccgccgcagcaatgccggcctcggcagcgtcagcaacggcggaaggatc 120 Query: 176 aggtgcatgcaggt 189 |||||||||||||| Sbjct: 121 aggtgcatgcaggt 134 Score = 87.7 bits (44), Expect = 5e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 ||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 246 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacc 301
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 236 bits (119), Expect = 9e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| ||||||| |||||||||||| | |||||||||||||||| Sbjct: 275 tcttccgcgagcacggcagcacccccggatactacgacggcaggtactggacaatgtgga 334 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| |||||||| ||| | ||||| | || ||||| |||||||||| Sbjct: 335 agctgcccatgttcggctgcaccgatgcctcgcaggtcatcaaggaggtagaggaggtca 394 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || ||||| |||||||||||||||||| | || || |||| Sbjct: 395 agaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagtgc 454 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 455 agtgcgtcagcttcatcgccttcaagccaccgggctgcgagga 497 Score = 216 bits (109), Expect = 8e-53 Identities = 166/185 (89%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 |||||||||||||| || |||||||| ||||| |||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcgtccgccaccaccgtggcaccattccagggcctcaagtccaccgcagga 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 |||||||||||||||||| | | |||||||||||| |||||||| || ||||||||| Sbjct: 61 ctccccgtcagccgccgcagcgcctccagcctcggcaacgtcagcaacggtggaaggatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 121 aggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 236 ccacc 240 ||||| Sbjct: 181 ccacc 185
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 236 bits (119), Expect = 9e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| | ||||| |||||||||||| | |||||||||||||||| Sbjct: 275 tcttccgcgagcacggcagcactcccggatactacgacggcaggtactggacaatgtgga 334 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| |||||||||||| ||||||| | || |||||||||||||||| Sbjct: 335 agctgcccatgttcggctgcaccgacgcctcacaggtcatcaaggaggtggaggaggtca 394 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||| ||||||||||||| || || || ||||||||||||| |||| | || ||||||| Sbjct: 395 agaagaagtaccctgacgcctatgttcgcatcatcggcttcgtcaacatccgtcaggtgc 454 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 455 agtgcgtcagcttcatcgccttcaagccaccgggctgcgagga 497 Score = 224 bits (113), Expect = 3e-55 Identities = 167/185 (90%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||| ||||| ||| |||| || ||||||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcttcggccacctccgttgcgcccttccagggcctcaagtccaccgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 |||||||||||||||||| || ||| |||||||||| |||||||| |||||||||||| Sbjct: 61 ctccccgtcagccgccgcagcaatgccggcctcggcagcgtcagcaacggcggaaggatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 121 aggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttcttacttg 180 Query: 236 ccacc 240 ||||| Sbjct: 181 ccacc 185
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 236 bits (119), Expect = 9e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| | ||||| |||||||||||| | |||||||||||||||| Sbjct: 275 tcttccgcgagcacggcagcactcccggatactacgacggcaggtactggacaatgtgga 334 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| |||||||||||| ||||||| | || |||||||||||||||| Sbjct: 335 agctgcccatgttcggctgcaccgacgcctcacaggtcatcaaggaggtggaggaggtca 394 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||| ||||||||||||| || || || ||||||||||||| |||| | || ||||||| Sbjct: 395 agaagaagtaccctgacgcctatgttcgcatcatcggcttcgtcaacatccgtcaggtgc 454 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 455 agtgcgtcagcttcatcgccttcaagccaccgggctgcgagga 497 Score = 216 bits (109), Expect = 8e-53 Identities = 166/185 (89%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||| || || ||| |||| || ||||||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcttccgccacctccgttgcgcccttccagggcctcaagtccaccgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 |||||||||||||||||| || ||| |||||||||| |||||||| |||||||||||| Sbjct: 61 ctccccgtcagccgccgcagcaatgccggcctcggcagcgtcagcaacggcggaaggatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 121 aggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttcttacttg 180 Query: 236 ccacc 240 ||||| Sbjct: 181 ccacc 185
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 236 bits (119), Expect = 9e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| | ||||| |||||||||||| | |||||||||||||||| Sbjct: 275 tcttccgcgagcacggcagcactcccggatactacgacggcaggtactggacaatgtgga 334 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| |||||||||||| |||||||| | || |||||||||||||||| Sbjct: 335 agctgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggtggaggaggtca 394 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || ||||| ||||||||||| |||||| | || || |||| Sbjct: 395 agaaggagtaccctgacgcctatgtccgcatcatcggcttagacaacatccgtcaagtgc 454 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||| ||||||||||||||||||| |||||| || |||||||| Sbjct: 455 agtgtgtcagcttcatcgccttcaagccaccaggctgcgagga 497 Score = 200 bits (101), Expect = 5e-48 Identities = 164/185 (88%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 |||||||||||||| || ||||||||||||||||||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcgtccgccaccaccgtcgcacccttccagggcctcaagtccaccgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 |||||||||||||| ||| | || ||||||||||| |||||||| || ||||| ||| Sbjct: 61 ctccccgtcagccgtcgcagctccggaagcctcggcagcgtcagcaacggtggaagaatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 121 cgatgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 236 ccacc 240 ||||| Sbjct: 181 ccacc 185
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 236 bits (119), Expect = 9e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 |||||||||||||| |||| | ||||| |||||||||||| | |||||||||||||||| Sbjct: 368 tcttccgtgagcacggcagcactcccggatactacgacggcaggtactggacaatgtgga 427 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| |||||||||||| | ||||| | || |||||||||||||| | Sbjct: 428 agctgcccatgttcggctgcaccgacgcctcccaggtcatcaaggaggtggaggaggtga 487 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || ||||| |||||||| ||||||||| | || ||||||| Sbjct: 488 agaaggagtaccctgacgcctatgtccgcatcatcggtttcgacaacatccgtcaggtgc 547 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||| |||||| || |||||||| Sbjct: 548 agtgcgtcagcttcatcgccttcaagccaccaggctgcgagga 590 Score = 109 bits (55), Expect = 1e-20 Identities = 115/135 (85%) Strand = Plus / Plus Query: 55 cgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccgg 114 ||||| |||||| ||||| ||| ||||||| ||||||||||| ||||||||||| || || Sbjct: 1 cgtgacggcttcctcggcgacctccgtcgcccccttccagggcctcaagtccactgctgg 60 Query: 115 tctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggat 174 || |||||| |||||||| || |||| ||||||||| |||||||| || |||||||| Sbjct: 61 ccttcccgtcggccgccgcagcaacgccggcctcggcaacgtcagcaacggtggaaggat 120 Query: 175 caggtgcatgcaggt 189 ||| ||||||||||| Sbjct: 121 cagatgcatgcaggt 135 Score = 87.7 bits (44), Expect = 5e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 223 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttatctgccacc 278
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 232 bits (117), Expect = 1e-57 Identities = 177/197 (89%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 38 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaag 97 Query: 104 tccacagccggtctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaat 163 ||||| ||||| | |||||| ||||||||||| | ||||| |||||| ||||||||| Sbjct: 98 tccaccgccggcatgcccgtcgcccgccgctccaactccagcttcggcaacgtcagcaat 157 Query: 164 ggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagacc 223 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 158 ggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagacc 217 Query: 224 ctgtcttacttgccacc 240 || || ||| ||||||| Sbjct: 218 ctctcctacctgccacc 234 Score = 196 bits (99), Expect = 8e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 245 gtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgg 304 |||| ||||||| || ||| ||||| || |||||||||||| | |||||||| |||||| Sbjct: 323 gtctaccgtgagaaccacaagtcccctggatactacgacggcaggtactggaccatgtgg 382 Query: 305 aagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtc 364 |||||||| |||||||| |||||||||||||| |||||||| || ||| | ||||||| | Sbjct: 383 aagctgcccatgttcgggtgcaccgacgccacccaggtgctcaaggagctcgaggaggcc 442 Query: 365 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 424 ||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||||| Sbjct: 443 aagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgttaggcaggtg 502 Query: 425 cagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||| | ||||||||||||||| || ||| ||||| ||||||||||| Sbjct: 503 cagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 549
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 228 bits (115), Expect = 2e-56 Identities = 184/207 (88%) Strand = Plus / Plus Query: 262 cagctcccccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcgg 321 |||| ||||||| |||||||||||| | |||||||||||||||||| |||| |||||||| Sbjct: 381 cagcacccccggatactacgacggcaggtactggacaatgtggaagttgcccatgttcgg 440 Query: 322 atgcaccgacgccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctga 381 ||||| |||||| ||||||| | || |||||||||||||||||||||||||||||||| Sbjct: 441 ctgcacagacgcctcacaggtcatcaaggaggtggaggaggtcaagaaggagtaccctga 500 Query: 382 cgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 ||| || ||||| |||||||||||||||||| | || || |||||||||||||||||||| Sbjct: 501 cgcctatgtccgcatcatcggcttcgacaacatccgtcaagtgcagtgcgtcagcttcat 560 Query: 442 cgccttcaggccaccgggttgcgagga 468 |||||||| |||||| || |||||||| Sbjct: 561 cgccttcaagccaccaggctgcgagga 587 Score = 131 bits (66), Expect = 4e-27 Identities = 117/134 (87%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 |||||||||||||| || ||| |||| || ||||||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcgtccgccacctccgttgcgcccttccagggcctcaagtccaccgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 ||| |||||||||||||| || ||| |||||||||| |||||||| |||||||||||| Sbjct: 61 ctcgccgtcagccgccgcagcaatgccggcctcggcagcgtcagcaacggcggaaggatc 120 Query: 176 aggtgcatgcaggt 189 |||||||||||||| Sbjct: 121 aggtgcatgcaggt 134 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 220 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacc 275
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| | || || ||||| |||||| | |||||||||||||||| Sbjct: 275 tcttccgcgagcacggcagcactcctggatactatgacggcaggtactggacaatgtgga 334 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| |||||||||||| |||||||| | || |||||||||||||||| Sbjct: 335 agctgcccatgttcgggtgcaccgacgcctcacaggtgatcaaggaggtggaggaggtca 394 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 |||| |||||||||||||| || ||||| |||||||||||||||||| | || || |||| Sbjct: 395 agaaagagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagtgc 454 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||| ||||||||||||| ||||||||| |||||||| Sbjct: 455 agtgcgtcagtttcatcgccttcaagccaccgggctgcgagga 497 Score = 176 bits (89), Expect = 7e-41 Identities = 161/185 (87%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 |||||||||||||| || ||| | ||||| ||||||||||||||||||||||| || || Sbjct: 1 gtgatggcttcgtccgccacctcggtcgcgcccttccaggggctcaagtccactgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 || ||||||||||||||| || |||| |||| ||||| |||||||| || ||||| ||| Sbjct: 61 cttcccgtcagccgccgcagcaacgccggccttggcagcgtcagcaacggtggaagaatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 | ||||||||||||||||| |||||||| |||||||| |||||||||||||||||| || Sbjct: 121 cgatgcatgcaggtgtggcctattgagggcatcaagaaattcgagaccctgtcttacctg 180 Query: 236 ccacc 240 ||||| Sbjct: 181 ccacc 185
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| | ||||| |||||||||||| | |||||||||||||||| Sbjct: 275 tcttccgcgagcacggcagcactcccggatactacgacggcaggtactggacaatgtgga 334 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| |||||||||||| ||||||| | || ||||||||||| |||| Sbjct: 335 agctgcccatgttcggctgcaccgacgcctcacaggtcatcaaggaggtggaggacgtca 394 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||| ||||||||||||| || || || ||||||||||||| |||| | || ||||||| Sbjct: 395 agaagaagtaccctgacgcctatgttcgcatcatcggcttcgtcaacatccgtcaggtgc 454 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 |||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 455 agtgcgtcagcttcatcgccttcaagccaccgggctgcgagga 497 Score = 224 bits (113), Expect = 3e-55 Identities = 167/185 (90%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||| ||||| ||| |||| || ||||||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcttcggccacctccgttgcgcccttccagggcctcaagtccaccgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 |||||||||||||||||| || ||| |||||||||| |||||||| |||||||||||| Sbjct: 61 ctccccgtcagccgccgcagcaatgccggcctcggcagcgtcagcaacggcggaaggatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 121 aggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctttcttacttg 180 Query: 236 ccacc 240 ||||| Sbjct: 181 ccacc 185
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| | ||||| |||||||||||| | |||||||||||||||| Sbjct: 275 tcttccgcgagcacggcagcactcccggatactacgacggcaggtactggacaatgtgga 334 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| ||||| |||||| |||||||| | || |||||||||||||||| Sbjct: 335 agctgcccatgttcggctgcactgacgcctcacaggtgatcaaggaggtggaggaggtca 394 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || || || |||||||||||||||||| | || || |||| Sbjct: 395 agaaggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgtcaagtgc 454 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 ||||||||||||||||||| |||| |||||| || |||||||| Sbjct: 455 agtgcgtcagcttcatcgcattcaagccaccaggctgcgagga 497 Score = 224 bits (113), Expect = 3e-55 Identities = 167/185 (90%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||| ||||| ||| ||||||| ||||||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcttcggccacctccgtcgcgcccttccagggcctcaagtccaccgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 |||||||||||||||||| || ||| |||||||||| |||||||| |||||||||||| Sbjct: 61 ctccccgtcagccgccgcagcaatgccggcctcggcagcgtcagcaacggcggaaggatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| || Sbjct: 121 aggtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 236 ccacc 240 ||||| Sbjct: 181 ccacc 185
>emb|CT830714.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN038G03, full insert sequence Length = 857 Score = 220 bits (111), Expect = 5e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 245 gtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgg 304 |||| ||||||| || |||| |||||||| |||||||||||| | |||||||| |||||| Sbjct: 349 gtctaccgtgagaaccacaggtcccccggatactacgacggcaggtactggaccatgtgg 408 Query: 305 aagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtc 364 |||||||| ||||||||||||||||||||||| |||||||| || ||| | ||||||| | Sbjct: 409 aagctgcccatgttcggatgcaccgacgccacccaggtgctcaaggagctcgaggaggcc 468 Query: 365 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 424 ||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||||| Sbjct: 469 aagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtg 528 Query: 425 cagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||| | ||||||||||||||| || ||| ||||| ||||||||||| Sbjct: 529 cagctcatcagcttcatcgcctacaagcctccgggctgcgaggagtc 575 Score = 218 bits (110), Expect = 2e-53 Identities = 178/200 (89%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 61 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaag 120 Query: 104 tccacagccggtctccccgtcagccgccgctccagcg---ccagcctcggcagggtcagc 160 ||||| ||||| | |||||| |||||||||| || ||||| |||||| |||||| Sbjct: 121 tccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagc 180 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 181 aatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgag 240 Query: 221 accctgtcttacttgccacc 240 ||||| |||||| ||||||| Sbjct: 241 accctctcttacctgccacc 260
>emb|CT830713.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA012L10, full insert sequence Length = 596 Score = 220 bits (111), Expect = 5e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 245 gtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgg 304 |||| ||||||| || |||| |||||||| |||||||||||| | |||||||| |||||| Sbjct: 109 gtctaccgtgagaaccacaggtcccccggatactacgacggcaggtactggaccatgtgg 168 Query: 305 aagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtc 364 |||||||| ||||||||||||||||||||||| |||||||| || ||| | ||||||| | Sbjct: 169 aagctgcccatgttcggatgcaccgacgccacccaggtgctcaaggagctcgaggaggcc 228 Query: 365 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 424 ||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||||| Sbjct: 229 aagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtg 288 Query: 425 cagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||| | ||||||||||||||| || ||| ||||| ||||||||||| Sbjct: 289 cagctcatcagcttcatcgcctacaagcctccgggctgcgaggagtc 335
>emb|CT830712.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA008K13, full insert sequence Length = 827 Score = 220 bits (111), Expect = 5e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 245 gtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgg 304 |||| ||||||| || |||| |||||||| |||||||||||| | |||||||| |||||| Sbjct: 344 gtctaccgtgagaaccacaggtcccccggatactacgacggcaggtactggaccatgtgg 403 Query: 305 aagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtc 364 |||||||| ||||||||||||||||||||||| |||||||| || ||| | ||||||| | Sbjct: 404 aagctgcccatgttcggatgcaccgacgccacccaggtgctcaaggagctcgaggaggcc 463 Query: 365 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 424 ||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||||| Sbjct: 464 aagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtg 523 Query: 425 cagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||| | ||||||||||||||| || ||| ||||| ||||||||||| Sbjct: 524 cagctcatcagcttcatcgcctacaagcctccgggctgcgaggagtc 570 Score = 210 bits (106), Expect = 5e-51 Identities = 177/200 (88%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 56 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaag 115 Query: 104 tccacagccggtctccccgtcagccgccgctccagcg---ccagcctcggcagggtcagc 160 ||||| ||||| | |||||| |||||||||| || ||||| |||||| |||||| Sbjct: 116 tccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagc 175 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 176 aatggcggcaggatcaggtgcatgcaggcgtggccgattgagggcatcaagaagttcgag 235 Query: 221 accctgtcttacttgccacc 240 ||||| |||||| ||||||| Sbjct: 236 accctctcttacctgccacc 255
>emb|CT833535.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA007D01, full insert sequence Length = 1486 Score = 220 bits (111), Expect = 5e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 245 gtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgg 304 |||| ||||||| || |||| |||||||| |||||||||||| | |||||||| |||||| Sbjct: 1004 gtctaccgtgagaaccacaggtcccccggatactacgacggcaggtactggaccatgtgg 1063 Query: 305 aagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtc 364 |||||||| ||||||||||||||||||||||| |||||||| || ||| | ||||||| | Sbjct: 1064 aagctgcccatgttcggatgcaccgacgccacccaggtgctcaaggagctcgaggaggcc 1123 Query: 365 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 424 ||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||||| Sbjct: 1124 aagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtg 1183 Query: 425 cagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||| | ||||||||||||||| || ||| ||||| ||||||||||| Sbjct: 1184 cagctcatcagcttcatcgcctacaagcctccgggctgcgaggagtc 1230
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 220 bits (111), Expect = 5e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| | ||||| |||||||||||| | |||||||||||||||| Sbjct: 275 tcttccgcgagcacggcagcactcccggatactacgacggcaggtactggacaatgtgga 334 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| ||||| |||||| |||||||| | | |||||||||||||||| Sbjct: 335 agctgcccatgttcggctgcactgacgcctcacaggtgatcagggaggtggaggaggtca 394 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || || || |||||||||||||||||| | || || |||| Sbjct: 395 agaaggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgtcaagtgc 454 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgagga 468 ||||||||||||||||||| |||| |||||| || |||||||| Sbjct: 455 agtgcgtcagcttcatcgcattcaagccaccaggctgcgagga 497 Score = 216 bits (109), Expect = 8e-53 Identities = 166/185 (89%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||| || || ||| ||||||| ||||||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcttccgccacctccgtcgcgcccttccagggcctcaagtccaccgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 |||||||||||||||||| || ||| |||||||||| |||||||| |||||||||||| Sbjct: 61 ctccccgtcagccgccgcagcaatgccggcctcggcagcgtcagcaacggcggaaggatc 120 Query: 176 aggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttg 235 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| || Sbjct: 121 aggtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctg 180 Query: 236 ccacc 240 ||||| Sbjct: 181 ccacc 185
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 218 bits (110), Expect = 2e-53 Identities = 178/200 (89%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 83 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaag 142 Query: 104 tccacagccggtctccccgtcagccgccgctccagcg---ccagcctcggcagggtcagc 160 ||||| ||||| | |||||| |||||||||| || ||||| |||||| |||||| Sbjct: 143 tccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagc 202 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 203 aatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgag 262 Query: 221 accctgtcttacttgccacc 240 ||||| |||||| ||||||| Sbjct: 263 accctctcttacctgccacc 282 Score = 188 bits (95), Expect = 2e-44 Identities = 194/227 (85%) Strand = Plus / Plus Query: 245 gtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgg 304 |||| ||||||| || |||| |||||||| |||||||| ||| | |||||||| |||||| Sbjct: 371 gtctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgtgg 430 Query: 305 aagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtc 364 |||||||| |||||||| ||||| |||||||| |||||||| || ||| | ||||||| | Sbjct: 431 aagctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggaggcc 490 Query: 365 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 424 ||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||||| Sbjct: 491 aagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtg 550 Query: 425 cagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||| | ||||||||||||||| || ||| ||||| ||||| ||||| Sbjct: 551 cagctcatcagcttcatcgcctacaagcccccgggctgcgaagagtc 597
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 216 bits (109), Expect = 8e-53 Identities = 199/229 (86%) Strand = Plus / Plus Query: 246 tcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgga 305 ||||||| |||||| |||| | ||||| |||||||| ||| | |||||||||||||||| Sbjct: 364 tcttccgcgagcacggcagcactcccggatactacgatggcaggtactggacaatgtgga 423 Query: 306 agctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtca 365 ||||||| |||||||| ||||| || ||| |||||||| | || |||||||||||||||| Sbjct: 424 agctgcccatgttcggctgcactgatgcctcacaggtgatcaaggaggtggaggaggtca 483 Query: 366 agaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgc 425 ||||||||||||||||||| || || || |||||||||||||||||| | || || |||| Sbjct: 484 agaaggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgccaagtgc 543 Query: 426 agtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccgg 474 ||||||||||||||||||| |||| |||||| || |||||||| ||||| Sbjct: 544 agtgcgtcagcttcatcgcattcaagccaccaggctgcgaggaatccgg 592 Score = 87.7 bits (44), Expect = 5e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 ||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 219 caggtatggccgattgagggcatcaagaagttcgagaccctgtcttacctgccacc 274 Score = 75.8 bits (38), Expect = 2e-10 Identities = 110/134 (82%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||| ||||| ||| | ||||| || |||||||| ||||||||||| || || Sbjct: 1 gtgatggcttcttcggccacctctgtcgccccattccagggcctcaagtccactgctggc 60 Query: 116 ctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatc 175 || ||||||||||| ||| || || |||| ||||| |||||||| || ||||| ||| Sbjct: 61 cttcccgtcagccgtcgcagcaatgcgggccttggcagcgtcagcaacggtggaagaatc 120 Query: 176 aggtgcatgcaggt 189 || ||||||||||| Sbjct: 121 agatgcatgcaggt 134
>ref|NM_001073091.1| Oryza sativa (japonica cultivar-group) Os12g0274700 (Os12g0274700) mRNA, complete cds Length = 981 Score = 210 bits (106), Expect = 5e-51 Identities = 177/200 (88%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 208 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaag 267 Query: 104 tccacagccggtctccccgtcagccgccgctccagcg---ccagcctcggcagggtcagc 160 ||||| ||||| | |||||| |||||||||| || ||||| |||||| |||||| Sbjct: 268 tccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagc 327 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 328 aatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgag 387 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 388 accctctcctacctgccacc 407 Score = 200 bits (101), Expect = 5e-48 Identities = 197/229 (86%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| |||||||| |||||||| ||| | |||||||| |||| Sbjct: 494 tcgtctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgt 553 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| ||||| |||||||| |||||||| || ||| | ||||||| Sbjct: 554 ggaagctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggagg 613 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||| Sbjct: 614 ccaagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcagg 673 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||||| | ||||||||||||||| || ||| ||||| ||||||||||| Sbjct: 674 tgcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 722
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 210 bits (106), Expect = 5e-51 Identities = 177/200 (88%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 211 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaag 270 Query: 104 tccacagccggtctccccgtcagccgccgctccagcg---ccagcctcggcagggtcagc 160 ||||| ||||| | |||||| |||||||||| || ||||| |||||| |||||| Sbjct: 271 tccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagc 330 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 331 aatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgag 390 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 391 accctctcctacctgccacc 410 Score = 200 bits (101), Expect = 5e-48 Identities = 197/229 (86%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| |||||||| |||||||| ||| | |||||||| |||| Sbjct: 497 tcgtctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgt 556 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| ||||| |||||||| |||||||| || ||| | ||||||| Sbjct: 557 ggaagctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggagg 616 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||| Sbjct: 617 ccaagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcagg 676 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||||| | ||||||||||||||| || ||| ||||| ||||||||||| Sbjct: 677 tgcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 725
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 210 bits (106), Expect = 5e-51 Identities = 177/200 (88%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 57 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaag 116 Query: 104 tccacagccggtctccccgtcagccgccgctccagcg---ccagcctcggcagggtcagc 160 ||||| ||||| | |||||| |||||||||| || ||||| |||||| |||||| Sbjct: 117 tccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagc 176 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 177 aatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgag 236 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 237 accctctcctacctgccacc 256 Score = 200 bits (101), Expect = 5e-48 Identities = 197/229 (86%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| |||||||| |||||||| ||| | |||||||| |||| Sbjct: 343 tcgtctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgt 402 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| ||||| |||||||| |||||||| || ||| | ||||||| Sbjct: 403 ggaagctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggagg 462 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||| Sbjct: 463 ccaagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcagg 522 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||||| | ||||||||||||||| || ||| ||||| ||||||||||| Sbjct: 523 tgcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 571
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 210 bits (106), Expect = 5e-51 Identities = 177/200 (88%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 60 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaag 119 Query: 104 tccacagccggtctccccgtcagccgccgctccagcg---ccagcctcggcagggtcagc 160 ||||| ||||| | |||||| |||||||||| || ||||| |||||| |||||| Sbjct: 120 tccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagc 179 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 180 aatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgag 239 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 240 accctctcctacctgccacc 259 Score = 200 bits (101), Expect = 5e-48 Identities = 197/229 (86%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| |||||||| |||||||| ||| | |||||||| |||| Sbjct: 346 tcgtctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgt 405 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| ||||| |||||||| |||||||| || ||| | ||||||| Sbjct: 406 ggaagctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggagg 465 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||| Sbjct: 466 ccaagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcagg 525 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||||| | ||||||||||||||| || ||| ||||| ||||||||||| Sbjct: 526 tgcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 574
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 210 bits (106), Expect = 5e-51 Identities = 177/200 (88%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 46 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaag 105 Query: 104 tccacagccggtctccccgtcagccgccgctccagcg---ccagcctcggcagggtcagc 160 ||||| ||||| | |||||| |||||||||| || ||||| |||||| |||||| Sbjct: 106 tccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagc 165 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 166 aatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgag 225 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 226 accctctcctacctgccacc 245 Score = 176 bits (89), Expect = 7e-41 Identities = 194/229 (84%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| |||||||| || ||||| ||| | |||||||| |||| Sbjct: 332 tcgtctaccgtgagaaccacagatcccccggatattacgatggcaggtactggaccatgt 391 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| ||||| |||||||| |||||||| || ||| | ||||||| Sbjct: 392 ggaagctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggagg 451 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| | ||||||| || | ||||||||||||||||||||||||| | |||||| Sbjct: 452 ccaagaaggcgaaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcagg 511 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||||| | |||| |||||||||| || ||| ||||| ||||||||||| Sbjct: 512 tgcagctcatcagtttcatcgcctacaagcccccgggctgcgaggagtc 560
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 210 bits (106), Expect = 5e-51 Identities = 177/200 (88%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 55 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaag 114 Query: 104 tccacagccggtctccccgtcagccgccgctccagcg---ccagcctcggcagggtcagc 160 ||||| ||||| | |||||| |||||||||| || ||||| |||||| |||||| Sbjct: 115 tccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagc 174 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 175 aatggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgag 234 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 235 accctctcctacctgccacc 254 Score = 200 bits (101), Expect = 5e-48 Identities = 197/229 (86%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| |||||||| |||||||| ||| | |||||||| |||| Sbjct: 341 tcgtctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgt 400 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| ||||| |||||||| |||||||| || ||| | ||||||| Sbjct: 401 ggaagctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggagg 460 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||| Sbjct: 461 ccaagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcagg 520 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||||| | ||||||||||||||| || ||| ||||| ||||||||||| Sbjct: 521 tgcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 569
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 204 bits (103), Expect = 3e-49 Identities = 150/165 (90%), Gaps = 3/165 (1%) Strand = Plus / Plus Query: 79 cgtcgcacccttccaggggctcaagtccacagccggtctccccgtcagccgccgctcca- 137 |||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 1 cgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccgccgctccaa 60 Query: 138 --gcgccagcctcggcagggtcagcaatggcggaaggatcaggtgcatgcaggtgtggcc 195 |||| ||||||||||| |||||||| || ||||||||||||||||||||||||||||| Sbjct: 61 cggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcc 120 Query: 196 gattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 || ||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 121 catcgagggcatcaagaagttcgagaccctgtcttacctgccacc 165 Score = 200 bits (101), Expect = 5e-48 Identities = 128/137 (93%) Strand = Plus / Plus Query: 350 gaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgac 409 ||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||||| Sbjct: 359 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 418 Query: 410 aacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggag 469 ||| |||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 419 aacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccaccgggctgcgaggag 478 Query: 470 tccggcaaggcataaac 486 ||||||||||| ||||| Sbjct: 479 tccggcaaggcctaaac 495
>emb|CT831821.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA003A02, full insert sequence Length = 923 Score = 202 bits (102), Expect = 1e-48 Identities = 176/200 (88%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||| ||| |||||||||| |||||||| ||| |||| || ||||||||||||||||| Sbjct: 59 atggcgcccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaa 118 Query: 104 tccacagccggtctccccgtcagccgccgctcca---gcgccagcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| ||||| |||||||||| |||||| Sbjct: 119 tccaccgccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcagc 178 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 || || ||||||||||| || |||||||||||||||||||| || ||||||||||| ||| Sbjct: 179 aacggtggaaggatcagctgtatgcaggtgtggccgattgaaggcatcaagaagtttgag 238 Query: 221 accctgtcttacttgccacc 240 |||||||| ||| ||||||| Sbjct: 239 accctgtcgtacctgccacc 258 Score = 153 bits (77), Expect = 1e-33 Identities = 194/233 (83%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || || |||||||| || ||| | |||||||| |||| Sbjct: 345 tcgtctaccgtgagaaccacaggtctcctgggtactatgatggcaggtactggaccatgt 404 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||||||||| || ||||| |||||||| || ||| | ||||||| Sbjct: 405 ggaagctgcctatgttcggatgcactgatgccacccaggtgctcaaggagctcgaggagg 464 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| || || || || | || || |||||||||||||||||| | |||||| Sbjct: 465 ccaagaaggcatatccagatgcatttgttcgcatcatcggcttcgacaacgtcaggcagg 524 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggc 475 |||||| | ||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 525 tgcagttgattagcttcatcgcctacaagcccccgggttgcgaggagtccggc 577
>ref|NM_001073138.1| Oryza sativa (japonica cultivar-group) Os12g0291400 (Os12g0291400) mRNA, complete cds Length = 943 Score = 202 bits (102), Expect = 1e-48 Identities = 176/200 (88%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||| ||| |||||||||| |||||||| ||| |||| || ||||||||||||||||| Sbjct: 65 atggcgcccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaa 124 Query: 104 tccacagccggtctccccgtcagccgccgctcca---gcgccagcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| ||||| |||||||||| |||||| Sbjct: 125 tccaccgccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcagc 184 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 || || ||||||||||| || |||||||||||||||||||| || ||||||||||| ||| Sbjct: 185 aacggtggaaggatcagctgtatgcaggtgtggccgattgaaggcatcaagaagtttgag 244 Query: 221 accctgtcttacttgccacc 240 |||||||| ||| ||||||| Sbjct: 245 accctgtcgtacctgccacc 264 Score = 153 bits (77), Expect = 1e-33 Identities = 194/233 (83%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || || |||||||| || ||| | |||||||| |||| Sbjct: 351 tcgtctaccgtgagaaccacaggtctcctgggtactatgatggcaggtactggaccatgt 410 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||||||||| || ||||| |||||||| || ||| | ||||||| Sbjct: 411 ggaagctgcctatgttcggatgcactgatgccacccaggtgctcaaggagctcgaggagg 470 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| || || || || | || || |||||||||||||||||| | |||||| Sbjct: 471 ccaagaaggcatatccagatgcatttgttcgcatcatcggcttcgacaacgtcaggcagg 530 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggc 475 |||||| | ||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 531 tgcagttgattagcttcatcgcctacaagcccccgggttgcgaggagtccggc 583
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 202 bits (102), Expect = 1e-48 Identities = 176/200 (88%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||| ||| |||||||||| |||||||| ||| |||| || ||||||||||||||||| Sbjct: 69 atggcgcccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaa 128 Query: 104 tccacagccggtctccccgtcagccgccgctcca---gcgccagcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| ||||| |||||||||| |||||| Sbjct: 129 tccaccgccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcagc 188 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 || || ||||||||||| || |||||||||||||||||||| || ||||||||||| ||| Sbjct: 189 aacggtggaaggatcagctgtatgcaggtgtggccgattgaaggcatcaagaagtttgag 248 Query: 221 accctgtcttacttgccacc 240 |||||||| ||| ||||||| Sbjct: 249 accctgtcgtacctgccacc 268 Score = 153 bits (77), Expect = 1e-33 Identities = 194/233 (83%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || || |||||||| || ||| | |||||||| |||| Sbjct: 355 tcgtctaccgtgagaaccacaggtctcctgggtactatgatggcaggtactggaccatgt 414 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||||||||| || ||||| |||||||| || ||| | ||||||| Sbjct: 415 ggaagctgcctatgttcggatgcactgatgccacccaggtgctcaaggagctcgaggagg 474 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| || || || || | || || |||||||||||||||||| | |||||| Sbjct: 475 ccaagaaggcatatccagatgcatttgttcgcatcatcggcttcgacaacgtcaggcagg 534 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggc 475 |||||| | ||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 535 tgcagttgattagcttcatcgcctacaagcccccgggttgcgaggagtccggc 587
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 202 bits (102), Expect = 1e-48 Identities = 173/196 (88%), Gaps = 3/196 (1%) Strand = Plus / Plus Query: 48 cccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtcca 107 ||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 62 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 121 Query: 108 cagccggtctccccgtcagccgccgctccagcg---ccagcctcggcagggtcagcaatg 164 | ||||| | |||||| |||||||||| || ||||| |||||| |||||||||| Sbjct: 122 ccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatg 181 Query: 165 gcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccc 224 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 182 gcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccc 241 Query: 225 tgtcttacttgccacc 240 | || ||| ||||||| Sbjct: 242 tctcctacctgccacc 257 Score = 200 bits (101), Expect = 5e-48 Identities = 197/229 (86%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| |||||||| |||||||| ||| | |||||||| |||| Sbjct: 344 tcgtctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgt 403 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| ||||| |||||||| |||||||| || ||| | ||||||| Sbjct: 404 ggaagctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggagg 463 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||| Sbjct: 464 ccaagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcagg 523 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||||| | ||||||||||||||| || ||| ||||| ||||||||||| Sbjct: 524 tgcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 572
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 200 bits (101), Expect = 5e-48 Identities = 197/229 (86%) Strand = Plus / Minus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| |||||||| |||||||| ||| | |||||||| |||| Sbjct: 10080011 tcgtctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgt 10079952 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| ||||| |||||||| |||||||| || ||| | ||||||| Sbjct: 10079951 ggaagctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggagg 10079892 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||| Sbjct: 10079891 ccaagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcagg 10079832 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||||| | ||||||||||||||| || ||| ||||| ||||||||||| Sbjct: 10079831 tgcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 10079783 Score = 161 bits (81), Expect = 4e-36 Identities = 192/229 (83%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || |||||||||||||| ||| | || ||||| |||| Sbjct: 11262070 tcgtctaccgtgagaaccacaggtctcccgggtactacgatggcaggtattggaccatgt 11262129 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| |||||||| ||||| |||||||| || ||| | ||||||| Sbjct: 11262130 ggaagctgcccatgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggagg 11262189 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||| || || | |||||||||||||||||||||||| | |||||| Sbjct: 11262190 ccaagaaggcctaccccgatgcctttgtccgtatcatcggcttcgacaacgtcaggcagg 11262249 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| | ||||||||||||| || ||| || |||||||||||||| Sbjct: 11262250 tgcagttgattagcttcatcgcctacaagcccccaggttgcgaggagtc 11262298 Score = 153 bits (77), Expect = 1e-33 Identities = 194/233 (83%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || || |||||||| || ||| | |||||||| |||| Sbjct: 11276733 tcgtctaccgtgagaaccacaggtctcctgggtactatgatggcaggtactggaccatgt 11276792 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||||||||| || ||||| |||||||| || ||| | ||||||| Sbjct: 11276793 ggaagctgcctatgttcggatgcactgatgccacccaggtgctcaaggagctcgaggagg 11276852 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| || || || || | || || |||||||||||||||||| | |||||| Sbjct: 11276853 ccaagaaggcatatccagatgcatttgttcgcatcatcggcttcgacaacgtcaggcagg 11276912 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggc 475 |||||| | ||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 11276913 tgcagttgattagcttcatcgcctacaagcccccgggttgcgaggagtccggc 11276965 Score = 141 bits (71), Expect = 4e-30 Identities = 130/149 (87%), Gaps = 3/149 (2%) Strand = Plus / Minus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 10080400 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaag 10080341 Query: 104 tccacagccggtctccccgtcagccgccgctc---cagcgccagcctcggcagggtcagc 160 ||||| ||||| | |||||| ||||||||| || | ||||| |||||| |||||| Sbjct: 10080340 tccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagc 10080281 Query: 161 aatggcggaaggatcaggtgcatgcaggt 189 |||||||| |||||||||||||||||||| Sbjct: 10080280 aatggcggcaggatcaggtgcatgcaggt 10080252 Score = 141 bits (71), Expect = 4e-30 Identities = 130/149 (87%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||| ||| |||||||||| |||||||| ||| |||| || ||||||||||||||||| Sbjct: 11276330 atggcgcccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaa 11276389 Query: 104 tccacagccggtctccccgtcagccgccgctc---cagcgccagcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||| ||||||| |||||||||| |||||| Sbjct: 11276390 tccaccgccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcagc 11276449 Query: 161 aatggcggaaggatcaggtgcatgcaggt 189 || || ||||||||||| || |||||||| Sbjct: 11276450 aacggtggaaggatcagctgtatgcaggt 11276478 Score = 117 bits (59), Expect = 6e-23 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| || ||||| ||| |||| || || ||||| ||||||||| Sbjct: 11261673 atggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaag 11261732 Query: 104 tccacagccggtctccccgtcagccgccgct---ccagcgccagcctcggcagggtcagc 160 ||||| ||||| ||||||||||||||||||| ||| | | || |||||| |||||| Sbjct: 11261733 tccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagc 11261792 Query: 161 aatggcggaaggatcaggtgcatgcaggt 189 |||||||||||||||| |||||||||||| Sbjct: 11261793 aatggcggaaggatcaagtgcatgcaggt 11261821 Score = 113 bits (57), Expect = 9e-22 Identities = 186/229 (81%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| | |||| || ||||| ||||| ||||| | |||||||| |||| Sbjct: 11319880 tcgtctaccgtgagaatcacagatcacccggatactatgacggtaggtactggaccatgt 11319939 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||| ||||| ||||| ||||||||||| ||||| || ||||| || ||| | ||||||| Sbjct: 11319940 ggaaactgcccatgtttggatgcaccgatgccacccaagtgctcaaggagctcgaggagg 11319999 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||| |||||||| || | ||| || ||||| ||||| |||||| | |||||| Sbjct: 11320000 caaagaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcagg 11320059 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| ||||||||||||| | | ||||||||||||||||||||| Sbjct: 11320060 tgcagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 11320108 Score = 109 bits (55), Expect = 1e-20 Identities = 117/137 (85%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||||||||| ||| |||| || ||||||||||||||||||||||| || || Sbjct: 11319503 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 11319562 Query: 116 ctccccgtcagccgccgctc---cagcgccagcctcggcagggtcagcaatggcggaagg 172 ||||| || | ||||||||| |||| | ||| | |||| |||||||||||||||||| Sbjct: 11319563 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 11319622 Query: 173 atcaggtgcatgcaggt 189 ||||| ||||||||||| Sbjct: 11319623 atcagatgcatgcaggt 11319639 Score = 77.8 bits (39), Expect = 5e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 186 aggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 ||||||||||||||||||| |||||||||||||||||||| || ||| ||||||| Sbjct: 10080152 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccacc 10080098 Score = 73.8 bits (37), Expect = 8e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 184 gcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 |||||||||||||||||| || ||||||||||| ||||||||||| ||| ||||||| Sbjct: 11276590 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccacc 11276646 Score = 73.8 bits (37), Expect = 8e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgcc 237 |||||||||||||||||||| || |||||||||||||| ||||| |||||||| Sbjct: 11319738 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgcc 11319790 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 ||||||||||| |||||||| |||||||||||||||||||| || ||| ||||||| Sbjct: 11261928 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccacc 11261983 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 89 ttccaggggctcaagtccacagccggtctccccgtcagccgccgctcca 137 |||||||||||||||||||| ||||| ||||| || ||||||||||||| Sbjct: 11264756 ttccaggggctcaagtccaccgccggcctcccagtgagccgccgctcca 11264804 Score = 44.1 bits (22), Expect = 0.70 Identities = 25/26 (96%) Strand = Plus / Plus Query: 164 ggcggaaggatcaggtgcatgcaggt 189 ||||||||||||| |||||||||||| Sbjct: 11264834 ggcggaaggatcaagtgcatgcaggt 11264859
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 200 bits (101), Expect = 5e-48 Identities = 197/229 (86%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| |||||||| |||||||| ||| | |||||||| |||| Sbjct: 82610 tcgtctaccgtgagaaccacagatcccccggatactacgatggcaggtactggaccatgt 82669 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| ||||| |||||||| |||||||| || ||| | ||||||| Sbjct: 82670 ggaagctgcccatgttcgggtgcactgacgccacccaggtgctcaaggagctcgaggagg 82729 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||| Sbjct: 82730 ccaagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgtcaggcagg 82789 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 ||||| | ||||||||||||||| || ||| ||||| ||||||||||| Sbjct: 82790 tgcagctcatcagcttcatcgcctacaagcccccgggctgcgaggagtc 82838 Score = 141 bits (71), Expect = 4e-30 Identities = 130/149 (87%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 82221 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaag 82280 Query: 104 tccacagccggtctccccgtcagccgccgctc---cagcgccagcctcggcagggtcagc 160 ||||| ||||| | |||||| ||||||||| || | ||||| |||||| |||||| Sbjct: 82281 tccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagc 82340 Query: 161 aatggcggaaggatcaggtgcatgcaggt 189 |||||||| |||||||||||||||||||| Sbjct: 82341 aatggcggcaggatcaggtgcatgcaggt 82369 Score = 77.8 bits (39), Expect = 5e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 186 aggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 ||||||||||||||||||| |||||||||||||||||||| || ||| ||||||| Sbjct: 82469 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccacc 82523
>emb|CT829384.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN082E19, full insert sequence Length = 924 Score = 178 bits (90), Expect = 2e-41 Identities = 173/200 (86%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| || ||||| ||| |||| || || ||||| ||||||||| Sbjct: 68 atggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaag 127 Query: 104 tccacagccggtctccccgtcagccgccgctccagcgcca---gcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| | | || |||||| |||||| Sbjct: 128 tccaccgccggcctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagc 187 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 188 aatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgag 247 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 248 accctatcgtacctgccacc 267 Score = 153 bits (77), Expect = 1e-33 Identities = 191/229 (83%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || ||||| |||||||| ||| | || ||||| |||| Sbjct: 354 tcgtctaccgtgagaaccacaggtctcccggatactacgatggcaggtattggaccatgt 413 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| |||||||| ||||| |||||||| || ||| | ||||||| Sbjct: 414 ggaagctgcccatgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggagg 473 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||| || || | |||||||||||||||||||||||| | |||||| Sbjct: 474 ccaagaaggcctaccccgatgcctttgtccgtatcatcggcttcgacaacgtcaggcagg 533 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| | ||||||||||||| || ||| || |||||||||||||| Sbjct: 534 tgcagttgattagcttcatcgcctacaagcccccaggttgcgaggagtc 582
>emb|CT829383.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA111C02, full insert sequence Length = 904 Score = 178 bits (90), Expect = 2e-41 Identities = 173/200 (86%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| || ||||| ||| |||| || || ||||| ||||||||| Sbjct: 71 atggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaag 130 Query: 104 tccacagccggtctccccgtcagccgccgctccagcgcca---gcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| | | || |||||| |||||| Sbjct: 131 tccaccgccggcctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagc 190 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 191 aatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgag 250 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 251 accctatcgtacctgccacc 270 Score = 153 bits (77), Expect = 1e-33 Identities = 191/229 (83%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || ||||| |||||||| ||| | || ||||| |||| Sbjct: 357 tcgtctaccgtgagaaccacaggtctcccggatactacgatggcaggtattggaccatgt 416 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| |||||||| ||||| |||||||| || ||| | ||||||| Sbjct: 417 ggaagctgcccatgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggagg 476 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||| || || | |||||||||||||||||||||||| | |||||| Sbjct: 477 ccaagaaggcctaccccgatgcctttgtccgtatcatcggcttcgacaacgtcaggcagg 536 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| | ||||||||||||| || ||| || |||||||||||||| Sbjct: 537 tgcagttgattagcttcatcgcctacaagcccccaggttgcgaggagtc 585
>emb|CT829382.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI032O16, full insert sequence Length = 767 Score = 178 bits (90), Expect = 2e-41 Identities = 173/200 (86%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| || ||||| ||| |||| || || ||||| ||||||||| Sbjct: 67 atggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaag 126 Query: 104 tccacagccggtctccccgtcagccgccgctccagcgcca---gcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| | | || |||||| |||||| Sbjct: 127 tccaccgccggcctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagc 186 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 187 aatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgag 246 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 247 accctatcgtacctgccacc 266 Score = 153 bits (77), Expect = 1e-33 Identities = 191/229 (83%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || ||||| |||||||| ||| | || ||||| |||| Sbjct: 353 tcgtctaccgtgagaaccacaggtctcccggatactacgatggcaggtattggaccatgt 412 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| |||||||| ||||| |||||||| || ||| | ||||||| Sbjct: 413 ggaagctgcccatgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggagg 472 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||| || || | |||||||||||||||||||||||| | |||||| Sbjct: 473 ccaagaaggcctaccccgatgcctttgtccgtatcatcggcttcgacaacgtcaggcagg 532 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| | ||||||||||||| || ||| || |||||||||||||| Sbjct: 533 tgcagttgattagcttcatcgcctacaagcccccaggttgcgaggagtc 581
>emb|CT837641.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN064P19, full insert sequence Length = 899 Score = 178 bits (90), Expect = 2e-41 Identities = 173/200 (86%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| || ||||| ||| |||| || || ||||| ||||||||| Sbjct: 67 atggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaag 126 Query: 104 tccacagccggtctccccgtcagccgccgctccagcgcca---gcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| | | || |||||| |||||| Sbjct: 127 tccaccgccggcctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagc 186 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 187 aatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgag 246 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 247 accctatcgtacctgccacc 266
>ref|NM_001073136.1| Oryza sativa (japonica cultivar-group) Os12g0291100 (Os12g0291100) mRNA, complete cds Length = 896 Score = 178 bits (90), Expect = 2e-41 Identities = 173/200 (86%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| || ||||| ||| |||| || || ||||| ||||||||| Sbjct: 68 atggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaag 127 Query: 104 tccacagccggtctccccgtcagccgccgctccagcgcca---gcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| | | || |||||| |||||| Sbjct: 128 tccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagc 187 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 188 aatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgag 247 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 248 accctatcgtacctgccacc 267 Score = 161 bits (81), Expect = 4e-36 Identities = 192/229 (83%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || |||||||||||||| ||| | || ||||| |||| Sbjct: 354 tcgtctaccgtgagaaccacaggtctcccgggtactacgatggcaggtattggaccatgt 413 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| |||||||| ||||| |||||||| || ||| | ||||||| Sbjct: 414 ggaagctgcccatgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggagg 473 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||| || || | |||||||||||||||||||||||| | |||||| Sbjct: 474 ccaagaaggcctaccccgatgcctttgtccgtatcatcggcttcgacaacgtcaggcagg 533 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| | ||||||||||||| || ||| || |||||||||||||| Sbjct: 534 tgcagttgattagcttcatcgcctacaagcccccaggttgcgaggagtc 582
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 178 bits (90), Expect = 2e-41 Identities = 173/200 (86%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| || ||||| ||| |||| || || ||||| ||||||||| Sbjct: 52 atggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaag 111 Query: 104 tccacagccggtctccccgtcagccgccgctccagcgcca---gcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| | | || |||||| |||||| Sbjct: 112 tccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagc 171 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 172 aatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgag 231 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 232 accctatcgtacctgccacc 251 Score = 161 bits (81), Expect = 4e-36 Identities = 192/229 (83%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || |||||||||||||| ||| | || ||||| |||| Sbjct: 338 tcgtctaccgtgagaaccacaggtctcccgggtactacgatggcaggtattggaccatgt 397 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| |||||||| ||||| |||||||| || ||| | ||||||| Sbjct: 398 ggaagctgcccatgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggagg 457 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||| || || | |||||||||||||||||||||||| | |||||| Sbjct: 458 ccaagaaggcctaccccgatgcctttgtccgtatcatcggcttcgacaacgtcaggcagg 517 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| | ||||||||||||| || ||| || |||||||||||||| Sbjct: 518 tgcagttgattagcttcatcgcctacaagcccccaggttgcgaggagtc 566
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 178 bits (90), Expect = 2e-41 Identities = 173/200 (86%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| || ||||| ||| |||| || || ||||| ||||||||| Sbjct: 69 atggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaag 128 Query: 104 tccacagccggtctccccgtcagccgccgctccagcgcca---gcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| | | || |||||| |||||| Sbjct: 129 tccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagc 188 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 189 aatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgag 248 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 249 accctatcgtacctgccacc 268 Score = 161 bits (81), Expect = 4e-36 Identities = 192/229 (83%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || |||||||||||||| ||| | || ||||| |||| Sbjct: 355 tcgtctaccgtgagaaccacaggtctcccgggtactacgatggcaggtattggaccatgt 414 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| |||||||| ||||| |||||||| || ||| | ||||||| Sbjct: 415 ggaagctgcccatgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggagg 474 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||| || || | |||||||||||||||||||||||| | |||||| Sbjct: 475 ccaagaaggcctaccccgatgcctttgtccgtatcatcggcttcgacaacgtcaggcagg 534 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| | ||||||||||||| || ||| || |||||||||||||| Sbjct: 535 tgcagttgattagcttcatcgcctacaagcccccaggttgcgaggagtc 583
>dbj|AK241131.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065097J24, full insert sequence Length = 2559 Score = 172 bits (87), Expect = 1e-39 Identities = 161/185 (87%), Gaps = 3/185 (1%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||||||||| ||| |||| || ||||||||||||||||||||||| || || Sbjct: 80 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 139 Query: 116 ctccccgtcagccgccgctccagcgcc---agcctcggcagggtcagcaatggcggaagg 172 ||||| || | ||||||||||||| | ||| | |||| |||||||||||||||||| Sbjct: 140 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 199 Query: 173 atcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttac 232 ||||| |||||||||||||||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 200 atcagatgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtac 259 Query: 233 ttgcc 237 ||||| Sbjct: 260 ttgcc 264 Score = 113 bits (57), Expect = 9e-22 Identities = 186/229 (81%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| | |||| || ||||| ||||| ||||| | |||||||| |||| Sbjct: 354 tcgtctaccgtgagaatcacagatcacccggatactatgacggtaggtactggaccatgt 413 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||| ||||| ||||| ||||||||||| ||||| || ||||| || ||| | ||||||| Sbjct: 414 ggaaactgcccatgtttggatgcaccgatgccacccaagtgctcaaggagctcgaggagg 473 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||| |||||||| || | ||| || ||||| ||||| |||||| | |||||| Sbjct: 474 caaagaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcagg 533 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| ||||||||||||| | | ||||||||||||||||||||| Sbjct: 534 tgcagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 582
>dbj|AK241437.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065162F19, full insert sequence Length = 2400 Score = 172 bits (87), Expect = 1e-39 Identities = 161/185 (87%), Gaps = 3/185 (1%) Strand = Plus / Minus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||||||||| ||| |||| || ||||||||||||||||||||||| || || Sbjct: 1651 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 1592 Query: 116 ctccccgtcagccgccgctccagcgcc---agcctcggcagggtcagcaatggcggaagg 172 ||||| || | ||||||||||||| | ||| | |||| |||||||||||||||||| Sbjct: 1591 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 1532 Query: 173 atcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttac 232 ||||| |||||||||||||||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 1531 atcagatgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtac 1472 Query: 233 ttgcc 237 ||||| Sbjct: 1471 ttgcc 1467 Score = 113 bits (57), Expect = 9e-22 Identities = 186/229 (81%) Strand = Plus / Minus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| | |||| || ||||| ||||| ||||| | |||||||| |||| Sbjct: 1377 tcgtctaccgtgagaatcacagatcacccggatactatgacggtaggtactggaccatgt 1318 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||| ||||| ||||| ||||||||||| ||||| || ||||| || ||| | ||||||| Sbjct: 1317 ggaaactgcccatgtttggatgcaccgatgccacccaagtgctcaaggagctcgaggagg 1258 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||| |||||||| || | ||| || ||||| ||||| |||||| | |||||| Sbjct: 1257 caaagaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcagg 1198 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| ||||||||||||| | | ||||||||||||||||||||| Sbjct: 1197 tgcagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 1149
>ref|NM_001073139.1| Oryza sativa (japonica cultivar-group) Os12g0292400 (Os12g0292400) mRNA, complete cds Length = 1994 Score = 172 bits (87), Expect = 1e-39 Identities = 161/185 (87%), Gaps = 3/185 (1%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||||||||| ||| |||| || ||||||||||||||||||||||| || || Sbjct: 76 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 135 Query: 116 ctccccgtcagccgccgctccagcgcc---agcctcggcagggtcagcaatggcggaagg 172 ||||| || | ||||||||||||| | ||| | |||| |||||||||||||||||| Sbjct: 136 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 195 Query: 173 atcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttac 232 ||||| |||||||||||||||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 196 atcagatgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtac 255 Query: 233 ttgcc 237 ||||| Sbjct: 256 ttgcc 260 Score = 113 bits (57), Expect = 9e-22 Identities = 186/229 (81%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| | |||| || ||||| ||||| ||||| | |||||||| |||| Sbjct: 350 tcgtctaccgtgagaatcacagatcacccggatactatgacggtaggtactggaccatgt 409 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||| ||||| ||||| ||||||||||| ||||| || ||||| || ||| | ||||||| Sbjct: 410 ggaaactgcccatgtttggatgcaccgatgccacccaagtgctcaaggagctcgaggagg 469 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||| |||||||| || | ||| || ||||| ||||| |||||| | |||||| Sbjct: 470 caaagaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcagg 529 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| ||||||||||||| | | ||||||||||||||||||||| Sbjct: 530 tgcagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 578
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 172 bits (87), Expect = 1e-39 Identities = 161/185 (87%), Gaps = 3/185 (1%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||||||||| ||| |||| || ||||||||||||||||||||||| || || Sbjct: 77 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 136 Query: 116 ctccccgtcagccgccgctccagcgcc---agcctcggcagggtcagcaatggcggaagg 172 ||||| || | ||||||||||||| | ||| | |||| |||||||||||||||||| Sbjct: 137 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 196 Query: 173 atcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttac 232 ||||| |||||||||||||||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 197 atcagatgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtac 256 Query: 233 ttgcc 237 ||||| Sbjct: 257 ttgcc 261 Score = 113 bits (57), Expect = 9e-22 Identities = 186/229 (81%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| | |||| || ||||| ||||| ||||| | |||||||| |||| Sbjct: 351 tcgtctaccgtgagaatcacagatcacccggatactatgacggtaggtactggaccatgt 410 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||| ||||| ||||| ||||||||||| ||||| || ||||| || ||| | ||||||| Sbjct: 411 ggaaactgcccatgtttggatgcaccgatgccacccaagtgctcaaggagctcgaggagg 470 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||| |||||||| || | ||| || ||||| ||||| |||||| | |||||| Sbjct: 471 caaagaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcagg 530 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| ||||||||||||| | | ||||||||||||||||||||| Sbjct: 531 tgcagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 579
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 172 bits (87), Expect = 1e-39 Identities = 161/185 (87%), Gaps = 3/185 (1%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||||||||| ||| |||| || ||||||||||||||||||||||| || || Sbjct: 79 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 138 Query: 116 ctccccgtcagccgccgctccagcgcc---agcctcggcagggtcagcaatggcggaagg 172 ||||| || | ||||||||||||| | ||| | |||| |||||||||||||||||| Sbjct: 139 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 198 Query: 173 atcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttac 232 ||||| |||||||||||||||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 199 atcagatgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtac 258 Query: 233 ttgcc 237 ||||| Sbjct: 259 ttgcc 263 Score = 113 bits (57), Expect = 9e-22 Identities = 186/229 (81%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| | |||| || ||||| ||||| ||||| | |||||||| |||| Sbjct: 353 tcgtctaccgtgagaatcacagatcacccggatactatgacggtaggtactggaccatgt 412 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||| ||||| ||||| ||||||||||| ||||| || ||||| || ||| | ||||||| Sbjct: 413 ggaaactgcccatgtttggatgcaccgatgccacccaagtgctcaaggagctcgaggagg 472 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||| |||||||| || | ||| || ||||| ||||| |||||| | |||||| Sbjct: 473 caaagaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcagg 532 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| ||||||||||||| | | ||||||||||||||||||||| Sbjct: 533 tgcagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 581
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 170 bits (86), Expect = 4e-39 Identities = 172/200 (86%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 |||| |||| |||||||||| || ||||| ||| |||| || || ||||| ||||||||| Sbjct: 53 atgggccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaag 112 Query: 104 tccacagccggtctccccgtcagccgccgctccagcgcca---gcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| | | || |||||| |||||| Sbjct: 113 tccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagc 172 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 173 aatggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgag 232 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 233 accctatcgtacctgccacc 252 Score = 115 bits (58), Expect = 2e-22 Identities = 154/186 (82%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || ||||| |||||||| ||| | || ||||| |||| Sbjct: 339 tcgtctaccgtgagaaccacaggtctcccggatactacgatggcaggtattggaccatgt 398 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| |||||||| ||||| |||||||| || || | || || | Sbjct: 399 ggaagctgcccatgttcggctgcaccgatgccacccaggtgctcaaggaactcgaagatg 458 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| |||||||| || | |||||||||||||||||||||||| | |||||| Sbjct: 459 ccaagaaggcctaccctgatgcctttgtccgtatcatcggcttcgacaacgtcaggcagg 518 Query: 423 tgcagt 428 |||||| Sbjct: 519 tgcagt 524
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 170 bits (86), Expect = 4e-39 Identities = 172/200 (86%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| || ||||| ||| |||| || || ||||| ||||||||| Sbjct: 67 atggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaag 126 Query: 104 tccacagccggtctccccgtcagccgccgctccagcgcca---gcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||||| | | || |||||| |||||| Sbjct: 127 tccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagc 186 Query: 161 aatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgag 220 |||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||||| Sbjct: 187 aatggcggaaggatcaagttcatgcaggtgtggccaattgagggcatcaagaagttcgag 246 Query: 221 accctgtcttacttgccacc 240 ||||| || ||| ||||||| Sbjct: 247 accctatcgtacctgccacc 266 Score = 145 bits (73), Expect = 3e-31 Identities = 190/229 (82%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||| ||| || |||| || |||||||||||||| ||| | || ||||| |||| Sbjct: 353 tcgtctaccgcgagaaccacaggtctcccgggtactacgatggcaggtattggaccatgt 412 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| |||||||| ||||| |||||||| || ||| | ||||||| Sbjct: 413 ggaagctgcccatgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggagg 472 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||| || || | ||||||||||||||||||||||| | |||||| Sbjct: 473 ccaagaaggcctaccccgatgcctttatccgtatcatcggcttcgacaacgtcaggcagg 532 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| | ||||||||||||| || ||| || |||||||||||||| Sbjct: 533 tgcagttgattagcttcatcgcctacaagcccccaggttgcgaggagtc 581
>dbj|AK241472.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065165F04, full insert sequence Length = 3148 Score = 165 bits (83), Expect = 3e-37 Identities = 161/185 (87%), Gaps = 4/185 (2%) Strand = Plus / Minus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||||||||| ||| |||| || ||||||||||||||||||||||| || || Sbjct: 1787 gtgatggcttcgtcggccacctccgt-gctcccttccaggggctcaagtccactgcgggc 1729 Query: 116 ctccccgtcagccgccgctccagcgcc---agcctcggcagggtcagcaatggcggaagg 172 ||||| || | ||||||||||||| | ||| | |||| |||||||||||||||||| Sbjct: 1728 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 1669 Query: 173 atcaggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttac 232 ||||| |||||||||||||||||||||||||| || |||||||||||||| ||||| ||| Sbjct: 1668 atcagatgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtac 1609 Query: 233 ttgcc 237 ||||| Sbjct: 1608 ttgcc 1604 Score = 113 bits (57), Expect = 9e-22 Identities = 186/229 (81%) Strand = Plus / Minus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| | |||| || ||||| ||||| ||||| | |||||||| |||| Sbjct: 1514 tcgtctaccgtgagaatcacagatcacccggatactatgacggtaggtactggaccatgt 1455 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||| ||||| ||||| ||||||||||| ||||| || ||||| || ||| | ||||||| Sbjct: 1454 ggaaactgcccatgtttggatgcaccgatgccacccaagtgctcaaggagctcgaggagg 1395 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||| |||||||| || | ||| || ||||| ||||| |||||| | |||||| Sbjct: 1394 caaagaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcagg 1335 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| ||||||||||||| | | ||||||||||||||||||||| Sbjct: 1334 tgcagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 1286
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 163 bits (82), Expect = 1e-36 Identities = 172/202 (85%) Strand = Plus / Plus Query: 245 gtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgg 304 |||| ||||||| || ||| ||||| || |||||||||||| | |||||||| |||||| Sbjct: 635 gtctaccgtgagaaccacaagtcccctggatactacgacggcaggtactggaccatgtgg 694 Query: 305 aagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtc 364 |||||||| |||||||| |||||||||||||| ||||| | || ||| | ||||||| | Sbjct: 695 aagctgcccatgttcgggtgcaccgacgccacccaggtcgtcaaggagctcgaggaggcc 754 Query: 365 aagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtg 424 ||||||| ||||||||| || | ||||||||||||||||||||||||| | |||||||| Sbjct: 755 aagaaggcgtaccctgatgcattcgtccgtatcatcggcttcgacaacgttaggcaggtg 814 Query: 425 cagtgcgtcagcttcatcgcct 446 ||| | ||||||||||||||| Sbjct: 815 cagctcatcagcttcatcgcct 836 Score = 91.7 bits (46), Expect = 3e-15 Identities = 124/146 (84%), Gaps = 3/146 (2%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||| ||||||||| Sbjct: 261 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttcca-gggctcaag 319 Query: 104 tccacagccggtctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaat 163 ||||| ||||| | ||||| |||||| | | | ||||| |||||| |||||| || Sbjct: 320 tccaccgccgg-catgccgtcgcccgccgtccgaactccagcttcggcaacgtcagc-at 377 Query: 164 ggcggaaggatcaggtgcatgcaggt 189 ||||| |||||||||||||||||||| Sbjct: 378 ggcggcaggatcaggtgcatgcaggt 403 Score = 77.8 bits (39), Expect = 5e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 186 aggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 ||||||||||||||||||| |||||||||||||||||||| || ||| ||||||| Sbjct: 492 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccacc 546
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 161 bits (81), Expect = 4e-36 Identities = 192/229 (83%) Strand = Plus / Minus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || |||||||||||||| ||| | || ||||| |||| Sbjct: 109984 tcgtctaccgtgagaaccacaggtctcccgggtactacgatggcaggtattggaccatgt 109925 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||||||||| |||||||| |||||||| ||||| |||||||| || ||| | ||||||| Sbjct: 109924 ggaagctgcccatgttcggctgcaccgatgccacccaggtgctcaaggagctcgaggagg 109865 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| ||||| || || | |||||||||||||||||||||||| | |||||| Sbjct: 109864 ccaagaaggcctaccccgatgcctttgtccgtatcatcggcttcgacaacgtcaggcagg 109805 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| | ||||||||||||| || ||| || |||||||||||||| Sbjct: 109804 tgcagttgattagcttcatcgcctacaagcccccaggttgcgaggagtc 109756 Score = 153 bits (77), Expect = 1e-33 Identities = 194/233 (83%) Strand = Plus / Minus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| || |||| || || |||||||| || ||| | |||||||| |||| Sbjct: 95321 tcgtctaccgtgagaaccacaggtctcctgggtactatgatggcaggtactggaccatgt 95262 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 ||||||||||||||||||||||||| || ||||| |||||||| || ||| | ||||||| Sbjct: 95261 ggaagctgcctatgttcggatgcactgatgccacccaggtgctcaaggagctcgaggagg 95202 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 |||||||| || || || || | || || |||||||||||||||||| | |||||| Sbjct: 95201 ccaagaaggcatatccagatgcatttgttcgcatcatcggcttcgacaacgtcaggcagg 95142 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggc 475 |||||| | ||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 95141 tgcagttgattagcttcatcgcctacaagcccccgggttgcgaggagtccggc 95089 Score = 141 bits (71), Expect = 4e-30 Identities = 130/149 (87%), Gaps = 3/149 (2%) Strand = Plus / Minus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||| ||| |||||||||| |||||||| ||| |||| || ||||||||||||||||| Sbjct: 95724 atggcgcccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaa 95665 Query: 104 tccacagccggtctccccgtcagccgccgctc---cagcgccagcctcggcagggtcagc 160 ||||| ||||| |||||||||||||||||||| ||||||| |||||||||| |||||| Sbjct: 95664 tccaccgccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcagc 95605 Query: 161 aatggcggaaggatcaggtgcatgcaggt 189 || || ||||||||||| || |||||||| Sbjct: 95604 aacggtggaaggatcagctgtatgcaggt 95576 Score = 117 bits (59), Expect = 6e-23 Identities = 127/149 (85%), Gaps = 3/149 (2%) Strand = Plus / Minus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| || ||||| ||| |||| || || ||||| ||||||||| Sbjct: 110381 atggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaag 110322 Query: 104 tccacagccggtctccccgtcagccgccgct---ccagcgccagcctcggcagggtcagc 160 ||||| ||||| ||||||||||||||||||| ||| | | || |||||| |||||| Sbjct: 110321 tccaccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagc 110262 Query: 161 aatggcggaaggatcaggtgcatgcaggt 189 |||||||||||||||| |||||||||||| Sbjct: 110261 aatggcggaaggatcaagtgcatgcaggt 110233 Score = 113 bits (57), Expect = 9e-22 Identities = 186/229 (81%) Strand = Plus / Minus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| | |||| || ||||| ||||| ||||| | |||||||| |||| Sbjct: 52174 tcgtctaccgtgagaatcacagatcacccggatactatgacggtaggtactggaccatgt 52115 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||| ||||| ||||| ||||||||||| ||||| || ||||| || ||| | ||||||| Sbjct: 52114 ggaaactgcccatgtttggatgcaccgatgccacccaagtgctcaaggagctcgaggagg 52055 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||| |||||||| || | ||| || ||||| ||||| |||||| | |||||| Sbjct: 52054 caaagaaggcataccctgatgccttcgttcgcatcattggctttgacaacgttaggcagg 51995 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| ||||||||||||| | | ||||||||||||||||||||| Sbjct: 51994 tgcagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 51946 Score = 109 bits (55), Expect = 1e-20 Identities = 117/137 (85%), Gaps = 3/137 (2%) Strand = Plus / Minus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||||||||| ||| |||| || ||||||||||||||||||||||| || || Sbjct: 52551 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 52492 Query: 116 ctccccgtcagccgccgctc---cagcgccagcctcggcagggtcagcaatggcggaagg 172 ||||| || | ||||||||| |||| | ||| | |||| |||||||||||||||||| Sbjct: 52491 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 52432 Query: 173 atcaggtgcatgcaggt 189 ||||| ||||||||||| Sbjct: 52431 atcagatgcatgcaggt 52415 Score = 73.8 bits (37), Expect = 8e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgcc 237 |||||||||||||||||||| || |||||||||||||| ||||| |||||||| Sbjct: 52316 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgcc 52264 Score = 73.8 bits (37), Expect = 8e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 184 gcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 |||||||||||||||||| || ||||||||||| ||||||||||| ||| ||||||| Sbjct: 95464 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccacc 95408 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 ||||||||||| |||||||| |||||||||||||||||||| || ||| ||||||| Sbjct: 110126 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccacc 110071 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 89 ttccaggggctcaagtccacagccggtctccccgtcagccgccgctcca 137 |||||||||||||||||||| ||||| ||||| || ||||||||||||| Sbjct: 107298 ttccaggggctcaagtccaccgccggcctcccagtgagccgccgctcca 107250 Score = 44.1 bits (22), Expect = 0.70 Identities = 25/26 (96%) Strand = Plus / Minus Query: 164 ggcggaaggatcaggtgcatgcaggt 189 ||||||||||||| |||||||||||| Sbjct: 107220 ggcggaaggatcaagtgcatgcaggt 107195
>dbj|AB067656.1| Oryza sativa (japonica cultivar-group) OsrbcS gene for small subunit of ribulose-1,5-bisphosphate carboxylase, promoter region and partial cds Length = 1815 Score = 141 bits (71), Expect = 4e-30 Identities = 130/149 (87%), Gaps = 3/149 (2%) Strand = Plus / Plus Query: 44 atggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaag 103 ||||||||| |||||||||| |||||||| ||||||||||| |||||||||||||||||| Sbjct: 1551 atggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaag 1610 Query: 104 tccacagccggtctccccgtcagccgccgctc---cagcgccagcctcggcagggtcagc 160 ||||| ||||| | |||||| ||||||||| || | ||||| |||||| |||||| Sbjct: 1611 tccaccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagc 1670 Query: 161 aatggcggaaggatcaggtgcatgcaggt 189 |||||||| |||||||||||||||||||| Sbjct: 1671 aatggcggcaggatcaggtgcatgcaggt 1699
>emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 858 Score = 139 bits (70), Expect = 2e-29 Identities = 151/178 (84%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||||||||||||||| || |||||||| |||||||||||||| |||||||| |||||| Sbjct: 420 cccgggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcacc 479 Query: 329 gacgccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttac 388 ||||||| |||||| | |||||||||||||| |||||||| ||||| || || | Sbjct: 480 gacgccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttc 539 Query: 389 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||| | |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 540 gtcagaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 597 Score = 58.0 bits (29), Expect = 5e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 157 cagcaatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagtt 216 |||||| ||||| ||| | || |||||||||||||||||| ||||| |||||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctcaagaagtt 206 Query: 217 cgagaccct 225 ||||||||| Sbjct: 207 cgagaccct 215
>gb|DQ088099.1| Musa acuminata genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma1) gene, complete cds; nuclear gene for chloroplast product Length = 2481 Score = 133 bits (67), Expect = 1e-27 Identities = 148/175 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||| ||||| |||||||| ||||||||| Sbjct: 1681 gggtactacgacgggcggtactggaccatgtggaatctgcccatgttcgggtgcaccgac 1740 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| || |||||||||||| ||||||||||||||| |||| | | || Sbjct: 1741 gctgtgcaggtggcgaaggaggtggaggagtgcaagaaggagtacccccacgccttcatc 1800 Query: 392 cgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 || |||||||||||||||||| || ||||||||||||||||| |||||||||| Sbjct: 1801 cgcatcatcggcttcgacaacaaccgccaggtgcagtgcgtcagtttcatcgcct 1855 Score = 48.1 bits (24), Expect = 0.045 Identities = 39/44 (88%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtc 228 |||||||||||||| ||||| | |||||||| ||||||||||| Sbjct: 1415 caggtgtggccgatcgagggcgtgaagaagtttgagaccctgtc 1458
>emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 800 Score = 133 bits (67), Expect = 1e-27 Identities = 148/175 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 447 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcaccgac 506 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 |||| |||||| | |||||||||||||| |||||||| ||||| || || |||| Sbjct: 507 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttcgtc 566 Query: 392 cgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 | |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 567 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 621 Score = 58.0 bits (29), Expect = 5e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 157 cagcaatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagtt 216 |||||| ||||| ||| | || |||||||||||||||||| ||||| |||||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctcaagaagtt 206 Query: 217 cgagaccct 225 ||||||||| Sbjct: 207 cgagaccct 215
>gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit (rbcS1) mRNA, complete cds Length = 853 Score = 133 bits (67), Expect = 1e-27 Identities = 148/175 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 417 gggtactacgacgggcggtactggaccatgtggaagctgcccatgttcgggtgcaccgac 476 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| || |||||||||||| ||||||||||||||| |||| | | || Sbjct: 477 gctgtgcaggtggcgaaggaggtggaggagtgcaagaaggagtacccccacgccttcatc 536 Query: 392 cgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 || |||||||||||||||||| || |||||||||||| |||| |||||||||| Sbjct: 537 cgcatcatcggcttcgacaacaaccgccaggtgcagtgcatcagtttcatcgcct 591 Score = 54.0 bits (27), Expect = 7e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 178 gtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtc 228 ||||||| ||||||||||||| ||||| | |||||||| ||||||||||| Sbjct: 239 gtgcatgaaggtgtggccgatcgagggcgtgaagaagtttgagaccctgtc 289
>emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit (cDNA clone pLg ssu1) Length = 776 Score = 131 bits (66), Expect = 4e-27 Identities = 150/178 (84%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||||||||||||||| | |||||||| |||||||||||||| |||||||| |||||| Sbjct: 346 cccgggtactacgacgggaggtactggacgatgtggaagctgcccatgttcggctgcacc 405 Query: 329 gacgccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttac 388 ||||||| |||||| | |||||||||||||| |||||||| ||||| || || | Sbjct: 406 gacgccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttc 465 Query: 389 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||| | |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 466 gtcagaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 523 Score = 48.1 bits (24), Expect = 0.045 Identities = 48/56 (85%) Strand = Plus / Plus Query: 179 tgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttactt 234 |||||||||||||||||| ||||| | ||||||||||||||||| || ||||| Sbjct: 172 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccctctcctactt 227
>emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 131 bits (66), Expect = 4e-27 Identities = 150/178 (84%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||||||||||||||| || |||||||| |||||||||||||| |||||||| |||||| Sbjct: 425 cccgggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcacc 484 Query: 329 gacgccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttac 388 ||||||| |||||| | |||||||||||||| |||||||| ||||| || | | Sbjct: 485 gacgccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtacttc 544 Query: 389 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||| | |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 545 gtcagaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 602 Score = 50.1 bits (25), Expect = 0.011 Identities = 58/69 (84%) Strand = Plus / Plus Query: 157 cagcaatggcggaaggatcaggtgcatgcaggtgtggccgattgagggtatcaagaagtt 216 |||||| ||||| ||| | || |||||||||||||||||| ||||| | |||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctgaagaagtt 206 Query: 217 cgagaccct 225 ||||||||| Sbjct: 207 cgagaccct 215
>emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 131 bits (66), Expect = 4e-27 Identities = 150/178 (84%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||||||||||||||| || |||||||| |||||||||||||| |||||||| |||||| Sbjct: 423 cccgggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcacc 482 Query: 329 gacgccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttac 388 ||||||| |||||| | |||||||||||||| |||||||| ||||| || | | Sbjct: 483 gacgccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtacttc 542 Query: 389 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||| | |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 543 gtcagaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 600 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 179 tgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccct 215
>emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 764 Score = 131 bits (66), Expect = 4e-27 Identities = 150/178 (84%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||||||||||||||| | |||||||| |||||||||||||| |||||||| |||||| Sbjct: 331 cccgggtactacgacgggaggtactggacgatgtggaagctgcccatgttcggctgcacc 390 Query: 329 gacgccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttac 388 ||||||| |||||| | |||||||||||||| |||||||| ||||| || || | Sbjct: 391 gacgccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttc 450 Query: 389 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||| | |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 451 gtcagaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 508 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 179 tgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 157 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccct 203
>gb|DQ245466.1| Zea mays clone 15809 mRNA sequence Length = 800 Score = 129 bits (65), Expect = 2e-26 Identities = 152/181 (83%) Strand = Plus / Plus Query: 57 tgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtc 116 ||||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||| | | Sbjct: 15 tgatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcc 74 Query: 117 tccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatca 176 |||||||| |||||||||| | |||||||||| |||||||| |||||||||||| Sbjct: 75 tccccgtcgcccgccgctcctccagaagcctcggcaacgtcagcaacggcggaaggatcc 134 Query: 177 ggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgc 236 |||||||||||||||||||| | || | ||||||||||||||| ||||| ||| ||| Sbjct: 135 ggtgcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacctgc 194 Query: 237 c 237 | Sbjct: 195 c 195 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 |||||||||||||| |||||||| |||||||||||||| |||||||| |||| ||||||| Sbjct: 317 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaacgacgcc 376 Query: 335 acacaggtg 343 || |||||| Sbjct: 377 acccaggtg 385 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 396 tcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccac 455 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||| | Sbjct: 438 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcccc 497 Query: 456 cggg 459 |||| Sbjct: 498 cggg 501
>gb|DQ245418.1| Zea mays clone 15362 mRNA sequence Length = 987 Score = 129 bits (65), Expect = 2e-26 Identities = 152/181 (83%) Strand = Plus / Plus Query: 57 tgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtc 116 ||||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||| | | Sbjct: 79 tgatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcc 138 Query: 117 tccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatca 176 |||||||| |||||||||| | |||||||||| |||||||| |||||||||||| Sbjct: 139 tccccgtcgcccgccgctcctccagaagcctcggcaacgtcagcaacggcggaaggatcc 198 Query: 177 ggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgc 236 |||||||||||||||||||| | || | ||||||||||||||| ||||| ||| ||| Sbjct: 199 ggtgcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacctgc 258 Query: 237 c 237 | Sbjct: 259 c 259 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 |||||||||||||| |||||||| |||||||||||||| |||||||| |||| ||||||| Sbjct: 381 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaacgacgcc 440 Query: 335 acacaggtg 343 || |||||| Sbjct: 441 acccaggtg 449 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 396 tcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccac 455 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||| | Sbjct: 502 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcccc 561 Query: 456 cggg 459 |||| Sbjct: 562 cggg 565
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 129 bits (65), Expect = 2e-26 Identities = 152/181 (83%) Strand = Plus / Plus Query: 57 tgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtc 116 ||||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||| | | Sbjct: 82 tgatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcc 141 Query: 117 tccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatca 176 |||||||| |||||||||| | |||||||||| |||||||| |||||||||||| Sbjct: 142 tccccgtcgcccgccgctcctccagaagcctcggcaacgtcagcaacggcggaaggatcc 201 Query: 177 ggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgc 236 |||||||||||||||||||| | || | ||||||||||||||| ||||| ||| ||| Sbjct: 202 ggtgcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacctgc 261 Query: 237 c 237 | Sbjct: 262 c 262 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 |||||||||||||| |||||||| |||||||||||||| |||||||| |||| ||||||| Sbjct: 384 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaacgacgcc 443 Query: 335 acacaggtg 343 || |||||| Sbjct: 444 acccaggtg 452 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 396 tcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccac 455 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||| | Sbjct: 505 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcccc 564 Query: 456 cggg 459 |||| Sbjct: 565 cggg 568
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 129 bits (65), Expect = 2e-26 Identities = 152/181 (83%) Strand = Plus / Plus Query: 57 tgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtc 116 ||||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||| | | Sbjct: 82 tgatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcc 141 Query: 117 tccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatca 176 |||||||| |||||||||| | |||||||||| |||||||| |||||||||||| Sbjct: 142 tccccgtcgcccgccgctcctccagaagcctcggcaacgtcagcaacggcggaaggatcc 201 Query: 177 ggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgc 236 |||||||||||||||||||| | || | ||||||||||||||| ||||| ||| ||| Sbjct: 202 ggtgcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacctgc 261 Query: 237 c 237 | Sbjct: 262 c 262 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 |||||||||||||| |||||||| |||||||||||||| |||||||| |||| ||||||| Sbjct: 384 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaacgacgcc 443 Query: 335 acacaggtg 343 || |||||| Sbjct: 444 acccaggtg 452 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 396 tcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccac 455 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||| | Sbjct: 505 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcccc 564 Query: 456 cggg 459 |||| Sbjct: 565 cggg 568
>gb|DQ088100.1| Musa acuminata genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, complete cds; nuclear gene for chloroplast product Length = 1970 Score = 123 bits (62), Expect = 9e-25 Identities = 149/178 (83%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 1376 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 1435 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | | || Sbjct: 1436 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcatc 1495 Query: 392 cgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttca 449 || |||||||||||||||||| || || |||||||| |||| ||||||||||||| Sbjct: 1496 cgcatcatcggcttcgacaacaaccgccaagtgcagtgtatcagtttcatcgccttca 1553 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 1112 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 1154
>emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 936 Score = 115 bits (58), Expect = 2e-22 Identities = 148/178 (83%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||||||||||||||| | |||||||| ||||||||| |||| |||||||| |||||| Sbjct: 401 cccgggtactacgacgggaggtactggacgatgtggaagttgcccatgttcggctgcacc 460 Query: 329 gacgccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttac 388 ||||||| |||||| | |||||||||||||| |||||||| ||||| || | | Sbjct: 461 gacgccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtacttc 520 Query: 389 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||| | |||||||||||||||||| ||| || || |||||| ||||||||||||||| Sbjct: 521 gtcagaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcct 578 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 179 tgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||||| ||||| |||||||||| |||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctcaagaagtttgagaccct 215
>gb|DQ088122.1| Musa x paradisiaca clone L3 genotype AAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Msp6) gene, partial cds; nuclear gene for chloroplast product Length = 608 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 467 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 526 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 527 gcgacgcaggtggcgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 586 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 587 cgcatcatcggcttcgacaac 607 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 117 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 159
>gb|DQ088118.1| Musa x paradisiaca clone L6 genotype AAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 593 cgcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088117.1| Musa x paradisiaca clone L5 genotype AAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 612 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 472 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 531 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | | || Sbjct: 532 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcatc 591 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 592 cgcatcatcggcttcgacaac 612 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 124 caggtgtggccgatcgagggcaagaagaagttcgagaccct 164
>gb|DQ088116.1| Musa x paradisiaca clone L2 genotype AAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 593 cgcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088114.1| Musa x paradisiaca clone S2 genotype AAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 522 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 381 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 440 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | | || Sbjct: 441 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcatc 500 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 501 cgcatcatcggcttcgacaac 521 Score = 58.0 bits (29), Expect = 5e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 117 tgcaggtgtggccgatcgagggcawgaagaagttcgagaccct 159
>gb|DQ088113.1| Musa x paradisiaca clone L7 genotype AAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 593 cgcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088111.1| Musa acuminata clone S5 genotype AA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 659 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 518 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 577 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | | || Sbjct: 578 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcatc 637 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 638 cgcatcatcggcttcgacaac 658 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 254 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 296
>gb|DQ088110.1| Musa acuminata clone S3 genotype AA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 663 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||| Sbjct: 522 gggtactacgacgggcggtactggacgatgtggaagcttcccatgttcgggtgcaccgac 581 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | |||| Sbjct: 582 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcgtc 641 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 642 cgcatcatcggcttcgacaac 662 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 254 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 296
>gb|DQ088109.1| Musa acuminata clone S1 genotype AA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 663 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||| Sbjct: 522 gggtactacgacgggcggtactggacgatgtggaagcttcccatgttcgggtgcaccgac 581 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | |||| Sbjct: 582 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcgtc 641 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 642 cgcatcatcggcttcgacaac 662 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 254 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 296
>gb|DQ088107.1| Musa acuminata clone L5 genotype AA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 612 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||| Sbjct: 472 gggtactacgacgggcgctactggaccatgtggaagcttcccatgttcgggtgcaccgac 531 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | |||| Sbjct: 532 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcgtc 591 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 592 cgcatcatcggcttcgacaac 612 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 124 caggtgtggccgatcgagggcaagaagaagttcgagaccct 164
>gb|DQ088106.1| Musa acuminata clone L3 genotype AA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 593 cgcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088105.1| Musa acuminata clone L2 genotype AA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 593 cgcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088104.1| Musa acuminata clone L1 genotype AA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 524 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| ||||||||||| || |||||||| ||||||||| Sbjct: 383 gggtactacgacgggcggtactggacgatgtggaagcttcccatgttcgggtgcaccgac 442 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | |||| Sbjct: 443 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcgtc 502 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 503 cgcatcatcggcttcgacaac 523 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 117 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 159
>gb|DQ088102.1| Musa acuminata clone L1 genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 593 cgcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088101.1| Musa acuminata genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, complete cds; nuclear gene for chloroplast product Length = 2350 Score = 113 bits (57), Expect = 9e-22 Identities = 144/173 (83%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 1948 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 2007 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 2008 gcgacgcaggtggcgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 2067 Query: 392 cgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgc 444 | |||||||||||||||||| || || ||||||||| |||| |||||||| Sbjct: 2068 ggcatcatcggcttcgacaacaaccgccaagtgcagtgcatcagtttcatcgc 2120 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 1597 caggtgtggccgatcgagggcaagaagaagttcgagaccct 1637
>gb|DQ088098.1| Musa acuminata clone S1 genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 659 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 518 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 577 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | | || Sbjct: 578 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcatc 637 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 638 cgcatcatcggcttcgacaac 658 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 254 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 296
>gb|DQ088096.1| Musa acuminata clone L3 genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma4) gene, partial cds; nuclear gene for chloroplast product Length = 528 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 387 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 446 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | | || Sbjct: 447 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcatc 506 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 507 cgcatcatcggcttcgacaac 527 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088094.1| Musa acuminata clone L1 genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 593 cgcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088091.1| Musa acuminata clone S5 genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 651 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 510 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 569 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | | || Sbjct: 570 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcatc 629 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 630 cgcatcatcggcttcgacaac 650 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 242 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 284
>gb|DQ088090.1| Musa acuminata clone L6 genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 527 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 386 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 445 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | | || Sbjct: 446 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcatc 505 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 506 cgcatcatcggcttcgacaac 526 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 118 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 160
>gb|DQ088089.1| Musa x paradisiaca clone S6 genotype AAAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 659 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 518 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 577 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | | || Sbjct: 578 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcatc 637 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 638 cgcatcatcggcttcgacaac 658 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 254 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 296
>gb|DQ088088.1| Musa x paradisiaca clone S2 genotype AAAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 663 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 522 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 581 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | | || Sbjct: 582 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcatc 641 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 642 cgcatcatcggcttcgacaac 662 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 254 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 296
>gb|DQ088087.1| Musa x paradisiaca clone S1 genotype AAAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma1) gene, partial cds; nuclear gene for chloroplast product Length = 676 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 535 gggtactacgacgggcggtactggaccatgtggaagctgcccatgttcgggtgcaccgac 594 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| || |||||||||||| ||||||||||||||| |||| | | || Sbjct: 595 gctgtgcaggtggcgaaggaggtggaggagtgcaagaaggagtacccccacgccttcatc 654 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 655 cgcatcatcggcttcgacaac 675
>gb|DQ088085.1| Musa x paradisiaca clone L5 genotype AAAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 612 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 472 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 531 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 532 gcgacgcaggtggcgaaagagctggaggagtgcaagaaggagtaccccagggccttcgtc 591 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 592 cgcatcatcggcttcgacaac 612 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 124 caggtgtggccgatcgagggcaagaagaagttcgagaccct 164
>gb|DQ088083.1| Musa x paradisiaca clone L3 genotype AAAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit-like (rbcS-Ma5) gene, partial sequence; nuclear gene for chloroplast product Length = 614 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaagagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 593 cgcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088082.1| Musa x paradisiaca clone S4 genotype AAAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Msp2) gene, partial cds; nuclear gene for chloroplast product Length = 675 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 534 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 593 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | | || Sbjct: 594 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcatc 653 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 654 cgcatcatcggcttcgacaac 674
>gb|DQ088080.1| Musa x paradisiaca clone L2 genotype AAAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Mb5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 593 cgcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088078.1| Musa balbisiana clone S5 genotype BB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Mb1) gene, partial cds; nuclear gene for chloroplast product Length = 673 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 533 gggtactacgacgggcggtactggaccatgtggaagctgcccatgttcgggtgcaccgac 592 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| || ||| |||||||| ||||||||||||||| ||||| | | || Sbjct: 593 gctgtgcaggtggcgaaggagttggaggagtgcaagaaggagtaccccgacgccttcatc 652 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 653 cgcatcatcggcttcgacaac 673 Score = 46.1 bits (23), Expect = 0.18 Identities = 38/43 (88%) Strand = Plus / Plus Query: 186 aggtgtggccgattgagggtatcaagaagttcgagaccctgtc 228 ||||||||||||| ||||| | |||||||| ||||||||||| Sbjct: 269 aggtgtggccgatcgagggcttgaagaagtttgagaccctgtc 311
>gb|DQ088068.1| Musa balbisiana genotype BB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Mb5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 113 bits (57), Expect = 9e-22 Identities = 120/141 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 593 cgcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 113 bits (57), Expect = 9e-22 Identities = 114/133 (85%) Strand = Plus / Plus Query: 57 tgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtc 116 ||||||| |||||||| ||| ||||||| || |||||||||||||||||||| ||| | | Sbjct: 507 tgatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcc 566 Query: 117 tccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatca 176 |||||||| |||||||||| | |||||||||| |||||||| |||||||||||| Sbjct: 567 tccccgtcgcccgccgctcctccagaagcctcggcaacgtcagcaacggcggaaggatcc 626 Query: 177 ggtgcatgcaggt 189 ||||||||||||| Sbjct: 627 ggtgcatgcaggt 639 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 |||||||||||||| |||||||| |||||||||||||| |||||||| |||| ||||||| Sbjct: 969 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaacgacgcc 1028 Query: 335 acacaggtg 343 || |||||| Sbjct: 1029 acccaggtg 1037 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 396 tcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccac 455 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||| | Sbjct: 1090 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcccc 1149 Query: 456 cggg 459 |||| Sbjct: 1150 cggg 1153
>gb|DQ088092.1| Musa acuminata clone S6 genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 664 Score = 111 bits (56), Expect = 4e-21 Identities = 119/140 (85%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 522 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 581 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | | || Sbjct: 582 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcatc 641 Query: 392 cgtatcatcggcttcgacaa 411 || ||||||||||||||||| Sbjct: 642 cgcatcatcggcttcgacaa 661 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 254 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 296
>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase small subunit mRNA, clone pTS406, 3' end Length = 317 Score = 111 bits (56), Expect = 4e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 419 caggtgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtccggcaag 478 ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 2 caggtgcagtgcgtcagcttcatcgccttcaagccaccgggctgcgaggagtccggcaag 61 Query: 479 gcataaac 486 || ||||| Sbjct: 62 gcctaaac 69
>emb|CT829442.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA047F12, full insert sequence Length = 953 Score = 109 bits (55), Expect = 1e-20 Identities = 117/137 (85%), Gaps = 3/137 (2%) Strand = Plus / Plus Query: 56 gtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggt 115 ||||||||||||||||| ||| |||| || ||||||||||||||||||||||| || || Sbjct: 82 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 141 Query: 116 ctccccgtcagccgccgctc---cagcgccagcctcggcagggtcagcaatggcggaagg 172 ||||| || | ||||||||| |||| | ||| | |||| |||||||||||||||||| Sbjct: 142 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 201 Query: 173 atcaggtgcatgcaggt 189 ||||| ||||||||||| Sbjct: 202 atcagatgcatgcaggt 218 Score = 105 bits (53), Expect = 2e-19 Identities = 185/229 (80%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| | |||| || ||||| ||||| ||||| | |||||||| |||| Sbjct: 459 tcgtctaccgtgagaatcacagatcacccggatactatgacggtaggtactggaccatgt 518 Query: 303 ggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggagg 362 |||| ||||| ||||| ||||||||||| ||||| || ||||| || ||| | ||||||| Sbjct: 519 ggaaactgcccatgtttggatgcaccgatgccacccaagtgctcaaggagctcgaggagg 578 Query: 363 tcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcagg 422 ||||||| |||||||| || | || || ||||| ||||| |||||| | |||||| Sbjct: 579 caaagaaggcataccctgatgcctttgttcgcatcattggctttgacaacgttaggcagg 638 Query: 423 tgcagtgcgtcagcttcatcgccttcaggccaccgggttgcgaggagtc 471 |||||| ||||||||||||| | | ||||||||||||||||||||| Sbjct: 639 tgcagttaatcagcttcatcgcgtataagccaccgggttgcgaggagtc 687 Score = 73.8 bits (37), Expect = 8e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgcc 237 |||||||||||||||||||| || |||||||||||||| ||||| |||||||| Sbjct: 317 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgcc 369
>gb|DQ088123.1| Musa x paradisiaca clone S4 genotype AAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Msp4) gene, partial cds; nuclear gene for chloroplast product Length = 532 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 391 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 450 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 451 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggccttcatc 510 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 511 cgcatcatcggcttcgacaac 531 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088121.1| Musa x paradisiaca clone L1 genotype AAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Msp6) gene, partial cds; nuclear gene for chloroplast product Length = 608 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 ||||||| |||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 467 gggtactgcgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 526 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 527 gcgacgcaggtggcgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 586 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 587 cgcatcatcggcttcgacaac 607 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 117 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 159
>gb|DQ088120.1| Musa x paradisiaca clone S3 genotype AAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 525 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 384 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 443 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 444 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggccttcatc 503 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 504 cgcatcatcggcttcgacaac 524 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 116 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 158
>gb|DQ088119.1| Musa x paradisiaca clone S1 genotype AAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 525 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 384 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 443 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 444 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggccttcatc 503 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 504 cgcatcatcggcttcgacaac 524 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 116 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 158
>gb|DQ088115.1| Musa x paradisiaca clone S6 genotype AAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 522 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 381 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 440 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 441 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggccttcatc 500 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 501 cgcatcatcggcttcgacaac 521 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 117 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 159
>gb|DQ088112.1| Musa x paradisiaca clone L4 genotype AAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaagagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 | |||||||||||||||||| Sbjct: 593 ggcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088108.1| Musa acuminata clone L7 genotype AA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 613 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaagagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 | |||||||||||||||||| Sbjct: 593 ggcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088103.1| Musa acuminata clone L2 genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaagagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 | |||||||||||||||||| Sbjct: 593 ggcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088097.1| Musa acuminata clone L4 genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaagagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 | |||||||||||||||||| Sbjct: 593 ggcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088095.1| Musa acuminata clone L2 genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcgacgcaggtggcgaaagagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 | |||||||||||||||||| Sbjct: 593 ggcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088093.1| Musa acuminata clone S7 genotype AAA chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma3) gene, partial cds; nuclear gene for chloroplast product Length = 663 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 522 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 581 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || |||||||||||| ||||||||||||||| | || | | | Sbjct: 582 gcggtgcaggtggtgaaggaggtggaggagtgcaagaaggagtaccccaaggccttcatt 641 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 642 cgcatcatcggcttcgacaac 662 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 254 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 296
>gb|DQ088084.1| Musa x paradisiaca clone L4 genotype AAAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 533 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 592 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 593 cgcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088081.1| Musa x paradisiaca clone S3 genotype AAAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Mb3) gene, partial cds; nuclear gene for chloroplast product Length = 663 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 522 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 581 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 582 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggccttcatc 641 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 642 cgcatcatcggcttcgacaac 662 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 254 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 296
>gb|DQ088079.1| Musa x paradisiaca clone L1 genotype AAAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Mb3) gene, partial cds; nuclear gene for chloroplast product Length = 526 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 385 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 444 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 445 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggccttcatc 504 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 505 cgcatcatcggcttcgacaac 525 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 117 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 159
>gb|DQ088077.1| Musa balbisiana clone S2 genotype BB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Mb2) gene, partial cds; nuclear gene for chloroplast product Length = 674 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 533 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 592 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 593 gcagtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggccttcatc 652 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 653 cgcatcatcggcttcgacaac 673 Score = 46.1 bits (23), Expect = 0.18 Identities = 38/43 (88%) Strand = Plus / Plus Query: 186 aggtgtggccgattgagggtatcaagaagttcgagaccctgtc 228 ||||||||||||| ||||| | |||||||| ||||||||||| Sbjct: 269 aggtgtggccgatcgagggcttgaagaagtttgagaccctgtc 311
>gb|DQ088076.1| Musa balbisiana clone S4 genotype BB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Mb3) gene, partial cds; nuclear gene for chloroplast product Length = 663 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 522 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 581 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 582 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggccttcatc 641 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 642 cgcatcatcggcttcgacaac 662 Score = 46.1 bits (23), Expect = 0.18 Identities = 38/43 (88%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | |||| |||||||||||| Sbjct: 254 tgcaggtgtggccgatcgagggcaagaagaggttcgagaccct 296
>gb|DQ088075.1| Musa balbisiana clone S3 genotype BB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Mb3) gene, partial cds; nuclear gene for chloroplast product Length = 663 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 522 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 581 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 582 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggccttcatc 641 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 642 cgcatcatcggcttcgacaac 662 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 254 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 296
>gb|DQ088074.1| Musa balbisiana clone S6 genotype BB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Mb3) gene, partial cds; nuclear gene for chloroplast product Length = 662 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 521 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 580 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 581 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggccttcatc 640 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 641 cgcatcatcggcttcgacaac 661 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 254 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 296
>gb|DQ088072.1| Musa balbisiana clone 6 genotype BB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Mb5) gene, partial cds; nuclear gene for chloroplast product Length = 612 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 472 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 531 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 532 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggccttcatc 591 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 592 cgcatcatcggcttcgacaac 612 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 124 caggtgtggccgatcgagggcaagaagaagttcgagaccct 164
>gb|DQ088070.1| Musa balbisiana clone 3 genotype BB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Mb5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 533 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggcctccatc 592 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 593 cgcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|DQ088069.1| Musa balbisiana clone 2 genotype BB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Mb5) gene, partial cds; nuclear gene for chloroplast product Length = 614 Score = 105 bits (53), Expect = 2e-19 Identities = 119/141 (84%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 473 gggtactacgacgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 532 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 533 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggccttcatc 592 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 593 cgcatcatcggcttcgacaac 613 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 105 bits (53), Expect = 2e-19 Identities = 149/181 (82%) Strand = Plus / Plus Query: 57 tgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtc 116 ||||||| |||||||| ||| ||||||| || |||||||| ||||||||| | ||| | | Sbjct: 202 tgatggcctcgtcggcaaccgccgtcgccccgttccagggtctcaagtccgccgccagcc 261 Query: 117 tccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatca 176 |||||||| ||||||| || | |||||||||| |||||||| |||||||||||| Sbjct: 262 tccccgtcgcccgccgcagcaccaggagcctcggcaacgtcagcaacggcggaaggatcc 321 Query: 177 ggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgc 236 |||||||||||||||||||| | || | ||||||||||||||| ||||| ||| ||| Sbjct: 322 ggtgcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacctgc 381 Query: 237 c 237 | Sbjct: 382 c 382 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 |||||||||||||| |||||||| |||||||||||||| |||||||| |||| ||||||| Sbjct: 504 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaacgacgcc 563 Query: 335 acacaggtg 343 || |||||| Sbjct: 564 acccaggtg 572 Score = 56.0 bits (28), Expect = 2e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 396 tcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccac 455 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||| | Sbjct: 625 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcccc 684 Query: 456 cggg 459 |||| Sbjct: 685 cggg 688
>gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 2328 Score = 103 bits (52), Expect = 9e-19 Identities = 115/136 (84%) Strand = Plus / Plus Query: 54 ccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccg 113 |||||||||| ||||| || ||| ||| || || |||||||||||||||||||| ||| Sbjct: 1182 ccgtgatggcctcgtccgccaccgccgctgctccgttccaggggctcaagtccaccgcca 1241 Query: 114 gtctccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaagga 173 | ||||||||| ||| ||||||| | ||||||||| || |||||||| |||||||||| Sbjct: 1242 gcctccccgtcgcccgacgctccaccaccagcctcgccaaagtcagcaacggcggaagga 1301 Query: 174 tcaggtgcatgcaggt 189 || ||||||||||||| Sbjct: 1302 tccggtgcatgcaggt 1317 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgc 333 |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 1582 tactacgacggccggtactggaccatgtggaagctgcccatgttcggctgcaccgacgc 1640
>emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate carboxylase small subunit percursor (rbcs gene) Length = 686 Score = 101 bits (51), Expect = 3e-18 Identities = 144/175 (82%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||| ||||| | |||||||| |||||||||||||| |||||||| ||||| ||| Sbjct: 400 gggtactatgacggaaggtactggaccatgtggaagctgcccatgttcgggtgcactgac 459 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 ||||| ||||| | |||| | ||||||| ||||||| ||||| | |||| |||| Sbjct: 460 gccacccaggttgtcgccgagctcgaggaggctaagaaggcttacccacatgctttcgtc 519 Query: 392 cgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 || || ||||| ||||||||| | || || ||||||||||||||||||||||||| Sbjct: 520 cgcattatcggattcgacaacgtccgtcaagtgcagtgcgtcagcttcatcgcct 574
>gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 968 Score = 99.6 bits (50), Expect = 1e-17 Identities = 143/174 (82%) Strand = Plus / Plus Query: 266 tcccccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgc 325 ||||| |||||||||||||| || |||||||| ||||||||| |||| |||||||| ||| Sbjct: 377 tccccggggtactacgacgggcgctactggaccatgtggaagttgcccatgttcgggtgc 436 Query: 326 accgacgccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgct 385 |||||| || | |||||||| || |||||||| ||| || |||| |||||| ||| Sbjct: 437 accgactcctcccaggtgctcaaggaggtggacgagtgcagtaaggcgtaccccgactac 496 Query: 386 tacgtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttc 439 | | ||| |||||||||||||||||| ||| || ||||||||| |||||||| Sbjct: 497 ttcaaccggatcatcggcttcgacaacacgcgccaagtgcagtgcatcagcttc 550 Score = 63.9 bits (32), Expect = 8e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 177 ggtgcatgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgc 236 |||||||||||||||||||| ||||| | |||||||||||||||||||| ||| ||| Sbjct: 204 ggtgcatgcaggtgtggccgccggagggcaagaagaagttcgagaccctgtcctacctgc 263 Query: 237 cacc 240 |||| Sbjct: 264 cacc 267
>gb|DQ088086.1| Musa x paradisiaca clone L6 genotype AAAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Ma5) gene, partial cds; nuclear gene for chloroplast product Length = 612 Score = 97.6 bits (49), Expect = 5e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||| ||| ||||||||| Sbjct: 472 gggtactacgacgggcgctactggaccatgtggaagctgcccatgtccgggtgcaccgac 531 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 532 gcgacgcaggtggcgaaagagctggaggagtgcaagaaggagtaccccagggccttcgtc 591 Query: 392 cgtatcatcggcttcgacaac 412 | |||||||||||||||||| Sbjct: 592 ggcatcatcggcttcgacaac 612 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 124 caggtgtggccgatcgagggcaagaagaagttcgagaccct 164
>gb|DQ088073.1| Musa balbisiana clone S1 genotype BB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit-like (rbcS-Mb3) gene, partial sequence; nuclear gene for chloroplast product Length = 662 Score = 97.6 bits (49), Expect = 5e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 521 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 580 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || | | |||||||| ||||||||||||||| | || | | || Sbjct: 581 gcggtgcaggtggtgaaggggctggaggagtgcaagaaggagtaccccaaggccttcatc 640 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 641 cgcatcatcggcttcgacaac 661 Score = 54.0 bits (27), Expect = 7e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 183 tgcaggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 254 tgcaggtgtggccgatcgagggcaagaagaagttcgagaccct 296
>gb|DQ088071.1| Musa balbisiana clone 5 genotype BB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit-like (rbcS-Mb5) gene, partial sequence; nuclear gene for chloroplast product Length = 611 Score = 97.6 bits (49), Expect = 5e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| ||| |||| ||||||||| Sbjct: 471 gggtactacgacgggcggtactggacgatgtggaagctgcccatgctcgggtgcaccgac 530 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| | || ||| |||||||| ||||||||||||||| | || | | || Sbjct: 531 gcggtgcaggtggtgaaggagctggaggagtgcaagaaggagtaccccaaggccttcatc 590 Query: 392 cgtatcatcggcttcgacaac 412 || |||||||||||||||||| Sbjct: 591 cgcatcatcggcttcgacaac 611 Score = 42.1 bits (21), Expect = 2.8 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 124 caggtgtggccgatcgagggcag-aagaagttcgagaccct 163
>emb|AJ843972.1| Plantago major mRNA for Rubisco SSU (rbcs1 gene) Length = 806 Score = 97.6 bits (49), Expect = 5e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| ||||||| ||||||| |||||||| ||||| ||||| || ||||||||||||| Sbjct: 354 tcgtctaccgtgagaacaacaggtcccccggatactatgacggacgctactggacaatgt 413 Query: 303 ggaagctgcctatgttcggatgcaccgacgcca 335 ||||| |||| |||||||| ||||| ||||||| Sbjct: 414 ggaagttgcccatgttcggttgcactgacgcca 446
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 97.6 bits (49), Expect = 5e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 |||||||||||||| |||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 632 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaccgacgcc 691 Query: 335 acacaggtg 343 || |||||| Sbjct: 692 acgcaggtg 700 Score = 89.7 bits (45), Expect = 1e-14 Identities = 111/133 (83%) Strand = Plus / Plus Query: 57 tgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtccacagccggtc 116 ||||||| |||||||| ||| ||||||| || |||||||| ||||||||| | ||| | | Sbjct: 212 tgatggcctcgtcggcaaccgccgtcgccccgttccagggtctcaagtccgccgccagcc 271 Query: 117 tccccgtcagccgccgctccagcgccagcctcggcagggtcagcaatggcggaaggatca 176 |||||||| ||||||| || | |||||||||| |||||||| |||||||||||| Sbjct: 272 tccccgtcgcccgccgcagcaccaggagcctcggcaacgtcagcaacggcggaaggatcc 331 Query: 177 ggtgcatgcaggt 189 ||||||||||||| Sbjct: 332 ggtgcatgcaggt 344 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 396 tcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||||||||||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 753 tcatcggcttcgacaacgtcaggcagacgcagtgcgtcagcttcatcgcct 803
>dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 790 Score = 93.7 bits (47), Expect = 8e-16 Identities = 167/207 (80%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 |||||||||| || ||| || |||||||| ||||| || |||||||||||||||||||| Sbjct: 370 ccgtgagcaccaccactcaccggggtactatgacggacgttactggacaatgtggaagct 429 Query: 310 gcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtcaagaa 369 ||| ||||| |||||||| || | | |||||| | || || || |||||| |||||| Sbjct: 430 gcccatgtttggatgcactgattcatctcaggtgttgaaagaagtagaggagtgcaagaa 489 Query: 370 ggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgcagtg 429 ||||||||| | || ||| |||| || || || ||||||||| | || || |||||||| Sbjct: 490 ggagtacccaaatgcatacatccgaattattggattcgacaacgtccgtcaagtgcagtg 549 Query: 430 cgtcagcttcatcgccttcaggccacc 456 | |||| ||||| ||||||| |||||| Sbjct: 550 catcagtttcattgccttcaagccacc 576
>gb|L24497.1|PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, complete cds Length = 813 Score = 93.7 bits (47), Expect = 8e-16 Identities = 158/195 (81%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 ||||||| ||||||| ||||| || ||||| || || | |||||||||||||||||||| Sbjct: 349 ccgtgagaacaacagatccccaggatactatgatggaaggtactggacaatgtggaagct 408 Query: 310 gcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtcaagaa 369 ||| |||||||||||||||||| | | |||||| | || ||| |||| |||| |||||| Sbjct: 409 gcccatgttcggatgcaccgactcttcccaggtgttgaaagagctggaagaggccaagaa 468 Query: 370 ggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgcagtg 429 || ||||| | | | | ||||||||||||| |||||||| | || || |||||||| Sbjct: 469 ggcctacccccaatccttcatccgtatcatcggattcgacaatgtccgtcaagtgcagtg 528 Query: 430 cgtcagcttcatcgc 444 | |||| |||||||| Sbjct: 529 catcagtttcatcgc 543
>gb|AF044400.1|AF044400 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2A (rbcS-P2A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 534 Score = 91.7 bits (46), Expect = 3e-15 Identities = 145/178 (81%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 199 cccggatactatgacgggagatactggacaatgtggaagttgcctatgttcggatgcacc 258 Query: 329 gacgccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttac 388 ||| | | || ||| | || ||| | | ||| |||||||||||||||| | || | Sbjct: 259 gactcggcccaagtgatgaaggagcttcaagagtgcaagaaggagtaccctcaggcatgg 318 Query: 389 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||||||||||||| ||||||||| | || || ||||| |||||||| ||||| |||| Sbjct: 319 atccgtatcatcggattcgacaacgttcgtcaagtgcaatgcgtcagtttcattgcct 376
>gb|AF044399.1|AF044399 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1B (rbcS-P1B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 629 Score = 91.7 bits (46), Expect = 3e-15 Identities = 145/178 (81%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 199 cccggatactatgacgggagatactggacaatgtggaagttgcctatgttcggatgcacc 258 Query: 329 gacgccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttac 388 ||| | | || ||| | || ||| | | ||| |||||||||||||||| | || | Sbjct: 259 gactcggcccaagtgatgaaggagcttcaagagtgcaagaaggagtaccctcaggcatgg 318 Query: 389 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||||||||||||| ||||||||| | || || ||||| |||||||| ||||| |||| Sbjct: 319 atccgtatcatcggattcgacaacgttcgtcaagtgcaatgcgtcagtttcattgcct 376
>gb|DQ088124.1| Musa x paradisiaca clone S5 genotype AAB chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS-Msp4) gene, partial cds; nuclear gene for chloroplast product Length = 532 Score = 89.7 bits (45), Expect = 1e-14 Identities = 117/141 (82%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgac 331 |||||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 391 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcgggtgcaccgac 450 Query: 332 gccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtc 391 || |||||| || ||| |||||||| ||||||||||||||| || | |||| Sbjct: 451 gcggtgcaggtggcgaaggagctggaggagtgcaagaaggagtaccccagggccttcgtc 510 Query: 392 cgtatcatcggcttcgacaac 412 | |||||||||||||||||| Sbjct: 511 ggcatcatcggcttcgacaac 531 Score = 50.1 bits (25), Expect = 0.011 Identities = 37/41 (90%) Strand = Plus / Plus Query: 185 caggtgtggccgattgagggtatcaagaagttcgagaccct 225 |||||||||||||| ||||| | ||||||||||||||||| Sbjct: 125 caggtgtggccgatcgagggcaagaagaagttcgagaccct 165
>gb|AY267351.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS2) mRNA, complete cds Length = 787 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 263 agctcccccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcgga 322 ||||| ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 372 agctctcccggatactatgacggaagatactggacaatgtggaagttgcctatgttcgga 431 Query: 323 tgcaccgac 331 ||||||||| Sbjct: 432 tgcaccgac 440
>gb|M38316.1|CIPRBCS2 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-2) mRNA, complete cds Length = 680 Score = 89.7 bits (45), Expect = 1e-14 Identities = 129/157 (82%) Strand = Plus / Plus Query: 290 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaac 349 |||||||||||||||||| |||| |||||||| ||||| ||| | | |||||| || Sbjct: 395 tactggacaatgtggaagttgcccatgttcggttgcactgacccatcccaggtggttgct 454 Query: 350 gaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgac 409 ||| | ||||||| |||||||| |||||||| || | | ||||||||||||| |||||| Sbjct: 455 gagctcgaggaggccaagaaggcttaccctgaggccttcatccgtatcatcggattcgac 514 Query: 410 aacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||| |||| || || |||||| |||| |||||||||| Sbjct: 515 aacgtgcgtcaagtacagtgcatcagtttcatcgcct 551
>dbj|D00572.1|PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO small subunit, complete cds Length = 844 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 290 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaac 349 ||||||||||||||||||||||| |||||||||||||||||| | | |||||| | || Sbjct: 421 tactggacaatgtggaagctgcccatgttcggatgcaccgactcttcccaggtgttgaag 480 Query: 350 gaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgac 409 ||| |||| |||| |||||||| ||||| | | | | ||||||||||||| |||||| Sbjct: 481 gagctggaagaggccaagaaggcttacccccagtccttcatccgtatcatcggattcgac 540 Query: 410 aacctgcggcaggtgcagtgcgtcagcttcatcgc 444 || | || || ||||||||| |||| |||||||| Sbjct: 541 aatgtccgtcaagtgcagtgcatcagtttcatcgc 575
>gb|AF044398.1|AF044398 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1A (rbcS-P1A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 608 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 199 cccggatactatgacgggagatactggacaatgtggaagttgcctatgttcggatgcacc 258 Query: 329 gac 331 ||| Sbjct: 259 gac 261 Score = 52.0 bits (26), Expect = 0.003 Identities = 65/78 (83%) Strand = Plus / Plus Query: 364 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 423 |||||||||||||||| | || | ||||||||||||| ||||||||| | || || || Sbjct: 294 caagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgttcgtcaagt 353 Query: 424 gcagtgcgtcagcttcat 441 ||| |||||||| ||||| Sbjct: 354 gcaatgcgtcagtttcat 371
>gb|AF044396.1|AF044396 Flaveria ramosissima ribulose-1,5-bisphosphate carboxylase small subunit R2 (rbcS-R2) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 574 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 199 cccggatactatgacggaagatactggacaatgtggaagttgcctatgttcggatgcacc 258 Query: 329 gac 331 ||| Sbjct: 259 gac 261
>emb|X65494.1|MSCARB Malus (unidentified species of crab apple) mRNA for rubisco-1,5-bisphosphate carboxylase Length = 853 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 290 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaac 349 ||||||||||||||||||||||| |||||||||||||||||| | | |||||| | || Sbjct: 425 tactggacaatgtggaagctgcccatgttcggatgcaccgactcttcccaggtgttgaaa 484 Query: 350 gaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgac 409 ||| |||| |||| |||||||| ||||| | | | | ||||||||||||| |||||| Sbjct: 485 gagctggaagaggccaagaaggcctacccccaatccttcatccgtatcatcggattcgac 544 Query: 410 aacctgcggcaggtgcagtgcgtcagcttcatcgc 444 || | || || ||||||||| |||| |||||||| Sbjct: 545 aatgtccgtcaagtgcagtgcatcagtttcatcgc 579
>gb|U29939.1|FPU29939 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS7) mRNA, complete cds Length = 743 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 358 cccggatactatgacggaagatactggacaatgtggaagttgcctatgttcggatgcacc 417 Query: 329 gac 331 ||| Sbjct: 418 gac 420
>gb|U29938.1|FPU29938 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS6) mRNA, complete cds Length = 724 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 343 cccggatactatgacggaagatactggacaatgtggaagttgcctatgttcggatgcacc 402 Query: 329 gac 331 ||| Sbjct: 403 gac 405 Score = 44.1 bits (22), Expect = 0.70 Identities = 64/78 (82%) Strand = Plus / Plus Query: 364 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 423 |||||||||||||||| | || | ||||||||||||| ||||||||| | || || || Sbjct: 438 caagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgtccgtcaagt 497 Query: 424 gcagtgcgtcagcttcat 441 ||| ||| |||| ||||| Sbjct: 498 gcaatgcatcagtttcat 515
>gb|U29937.1|FPU29937 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS5) mRNA, complete cds Length = 731 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 346 cccggatactatgacggaagatactggacaatgtggaagttgcctatgttcggatgcacc 405 Query: 329 gac 331 ||| Sbjct: 406 gac 408
>gb|U29936.1|FPU29936 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS4) mRNA, complete cds Length = 753 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 375 cccggatactatgacggaagatactggacaatgtggaagttgcctatgttcggatgcacc 434 Query: 329 gac 331 ||| Sbjct: 435 gac 437
>gb|U29935.1|FPU29935 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS3) mRNA, complete cds Length = 746 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 360 cccggatactatgacggaagatactggacaatgtggaagttgcctatgttcggatgcacc 419 Query: 329 gac 331 ||| Sbjct: 420 gac 422
>gb|U29934.1|FPU29934 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS2) mRNA, complete cds Length = 763 Score = 85.7 bits (43), Expect = 2e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 372 cccggatactatgacggaagatactggacaatgtggaagttgcctatgttcggatgcacc 431 Query: 329 gac 331 ||| Sbjct: 432 gac 434 Score = 42.1 bits (21), Expect = 2.8 Identities = 66/81 (81%) Strand = Plus / Plus Query: 364 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 423 |||||||||||||||| | || | ||||||||||||| || |||||| | || || || Sbjct: 467 caagaaggagtaccctcaggcatggatccgtatcatcggatttgacaacgttcgtcaagt 526 Query: 424 gcagtgcgtcagcttcatcgc 444 |||||| |||| |||||||| Sbjct: 527 tcagtgcatcagtttcatcgc 547
>gb|AY693395.1| Lolium perenne ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 195 Score = 83.8 bits (42), Expect = 8e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| |||||||||||| | ||||||||||||||||||||||| |||||||| ||||| Sbjct: 130 cccggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcact 189 Query: 329 gacgcc 334 |||||| Sbjct: 190 gacgcc 195
>gb|DQ336280.1| Vitis pseudoreticulata ribulose-1,5-bisphophate carboxylase/oxygenase small subunit mRNA, complete cds Length = 543 Score = 83.8 bits (42), Expect = 8e-13 Identities = 129/158 (81%) Strand = Plus / Plus Query: 254 gagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagctgcct 313 ||||||||||| || || || ||||||||||| | |||||||| |||||||||||||| Sbjct: 337 gagcacaacagatctccaggatactacgacggaaggtactggaccatgtggaagctgccc 396 Query: 314 atgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtcaagaaggag 373 |||||||| ||||| ||| | | |||||| |||| |||||| | || | || || |||| Sbjct: 397 atgttcgggtgcactgactcagcccaggtgattaaggaggtgcaagaagccaggacggag 456 Query: 374 taccctgacgcttacgtccgtatcatcggcttcgacaa 411 |||||| |||| || |||| |||||||| |||||||| Sbjct: 457 taccctaacgcccacatccgaatcatcggattcgacaa 494
>gb|AF044401.1|AF044401 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2B (rbcS-P2B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 532 Score = 83.8 bits (42), Expect = 8e-13 Identities = 144/178 (80%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| |||||||||| ||||||||| |||||||||||||||||||| Sbjct: 199 cccggatactatgacggaagatactggacgatgtggaagttgcctatgttcggatgcacc 258 Query: 329 gacgccacacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttac 388 ||| | | || ||| | || ||| | | ||| |||||||||||||||| | || | Sbjct: 259 gactcggcccaagtgatgaaggagcttcaagagtgcaagaaggagtaccctcaggcatgg 318 Query: 389 gtccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||||||||||||| ||||||||| | || || ||||| |||||||| ||||| |||| Sbjct: 319 atccgtatcatcggattcgacaacgttcgtcaagtgcaatgcgtcagtttcattgcct 376
>emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene) Length = 761 Score = 83.8 bits (42), Expect = 8e-13 Identities = 147/182 (80%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 379 tactatgacggacgctactggacaatgtggaagctacccatgttcggatgcaccgatgcc 438 Query: 335 acacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgt 394 | || || || ||| |||||||| ||||||||| ||||| |||| | ||| | Sbjct: 439 agccaagtcattgctgagctggaggagtgcaagaaggaataccccaacgcctgggtcagg 498 Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggcca 454 |||||||||||||||||| | || || || |||||| |||| ||||| |||| || |||| Sbjct: 499 atcatcggcttcgacaacgttcgccaagtccagtgcatcagtttcattgcctccaagcca 558 Query: 455 cc 456 || Sbjct: 559 cc 560
>gb|BC038257.1| Mus musculus cDNA clone MGC:47002 IMAGE:5148367, complete cds Length = 763 Score = 81.8 bits (41), Expect = 3e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 |||||||||||||| || || || ||||| || || || |||||||| ||||||||| | Sbjct: 379 ccgtgagcacaacaaatcgccaggatactatgatggtcgctactggactatgtggaagtt 438 Query: 310 gcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtcaagaa 369 |||||||||||| ||||| ||| | | |||||| | || ||||| |||||||||||||| Sbjct: 439 gcctatgttcgggtgcactgacccagctcaggtggtgaatgaggttgaggaggtcaagaa 498 Query: 370 ggagtaccctgacgctt 386 || |||||||| |||| Sbjct: 499 ggcttaccctgatgctt 515
>gb|AY163904.1| Chrysanthemum x morifolium ribulose-1,5-bisphosphate carboxylase small subunit gene, complete cds; nuclear gene for chloroplast product Length = 2662 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 ||||||| |||| |||||||||| |||||||| ||| |||||||||||||||||||| | Sbjct: 1502 ccgtgagaacaatcgctcccccggatactacgatggcagatactggacaatgtggaagtt 1561 Query: 310 gcctatgttcggatgca 326 ||| |||||||| |||| Sbjct: 1562 gcccatgttcgggtgca 1578
>gb|L10214.1|CIP2RSS Mesembryanthemum crystallinum (clone: rbcs-2) rubisco small subunit gene, complete cds Length = 2671 Score = 81.8 bits (41), Expect = 3e-12 Identities = 128/157 (81%) Strand = Plus / Plus Query: 290 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgcttaac 349 |||||||||||||||||| |||| |||||||| ||||| ||| | | |||||| || Sbjct: 1877 tactggacaatgtggaagttgcccatgttcggttgcactgacccatcccaggtggttgct 1936 Query: 350 gaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgtatcatcggcttcgac 409 ||| | ||||||| |||||||| |||||||| || | | |||||||||||| |||||| Sbjct: 1937 gagctcgaggaggccaagaaggcttaccctgaggccttcacccgtatcatcggattcgac 1996 Query: 410 aacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||| |||| || || |||||| |||| |||||||||| Sbjct: 1997 aacgtgcgtcaagtacagtgcatcagtttcatcgcct 2033
>emb|AJ419827.1|CAR419827 Coffea arabica rbcs1 gene for rubisco small subunit Length = 2034 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||| ||||||||||||||||||| ||| ||||| ||||| Sbjct: 1759 tactatgacggacgctactggaccatgtggaagctgcctatgtacggctgcacggacgca 1818 Query: 335 acacaggtgcttaacgaggt 354 || |||||||| |||||||| Sbjct: 1819 actcaggtgctgaacgaggt 1838 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 1879 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 1925
>gb|DQ300277.1| Coffea arabica cultivar Rume Sudan plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||| ||||||||||||||||||| ||| ||||| ||||| Sbjct: 402 tactatgacggacgctactggaccatgtggaagctgcctatgtacggctgcacggacgca 461 Query: 335 acacaggtgcttaacgaggt 354 || |||||||| |||||||| Sbjct: 462 actcaggtgctgaacgaggt 481 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300276.1| Coffea arabica cultivar Colombia plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||| ||||||||||||||||||| ||| ||||| ||||| Sbjct: 402 tactatgacggacgctactggaccatgtggaagctgcctatgtacggctgcacggacgca 461 Query: 335 acacaggtgcttaacgaggt 354 || |||||||| |||||||| Sbjct: 462 actcaggtgctgaacgaggt 481 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300275.1| Coffea arabica cultivar SL-28 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||| ||||||||||||||||||| ||| ||||| ||||| Sbjct: 402 tactatgacggacgctactggaccatgtggaagctgcctatgtacggctgcacggacgca 461 Query: 335 acacaggtgcttaacgaggt 354 || |||||||| |||||||| Sbjct: 462 actcaggtgctgaacgaggt 481 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300274.1| Coffea arabica cultivar Kent plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||| ||||||||||||||||||| ||| ||||| ||||| Sbjct: 402 tactatgacggacgctactggaccatgtggaagctgcctatgtacggctgcacggacgca 461 Query: 335 acacaggtgcttaacgaggt 354 || |||||||| |||||||| Sbjct: 462 actcaggtgctgaacgaggt 481 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300273.1| Coffea arabica cultivar F-502 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||| ||||||||||||||||||| ||| ||||| ||||| Sbjct: 402 tactatgacggacgctactggaccatgtggaagctgcctatgtacggctgcacggacgca 461 Query: 335 acacaggtgcttaacgaggt 354 || |||||||| |||||||| Sbjct: 462 actcaggtgctgaacgaggt 481 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300272.1| Coffea arabica cultivar Tipica plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||| ||||||||||||||||||| ||| ||||| ||||| Sbjct: 402 tactatgacggacgctactggaccatgtggaagctgcctatgtacggctgcacggacgca 461 Query: 335 acacaggtgcttaacgaggt 354 || |||||||| |||||||| Sbjct: 462 actcaggtgctgaacgaggt 481 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300271.1| Coffea arabica cultivar Bourbon plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||| ||||||||||||||||||| ||| ||||| ||||| Sbjct: 402 tactatgacggacgctactggaccatgtggaagctgcctatgtacggctgcacggacgca 461 Query: 335 acacaggtgcttaacgaggt 354 || |||||||| |||||||| Sbjct: 462 actcaggtgctgaacgaggt 481 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300270.1| Coffea arabica cultivar Mundo novo plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||| ||||||||||||||||||| ||| ||||| ||||| Sbjct: 402 tactatgacggacgctactggaccatgtggaagctgcctatgtacggctgcacggacgca 461 Query: 335 acacaggtgcttaacgaggt 354 || |||||||| |||||||| Sbjct: 462 actcaggtgctgaacgaggt 481 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300269.1| Coffea arabica cultivar Ethiopia 167 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||| ||||||||||||||||||| ||| ||||| ||||| Sbjct: 402 tactatgacggacgctactggaccatgtggaagctgcctatgtacggctgcacggacgca 461 Query: 335 acacaggtgcttaacgaggt 354 || |||||||| |||||||| Sbjct: 462 actcaggtgctgaacgaggt 481 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300268.1| Coffea arabica cultivar Ethiopia 87 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||| ||||||||||||||||||| ||| ||||| ||||| Sbjct: 402 tactatgacggacgctactggaccatgtggaagctgcctatgtacggctgcacggacgca 461 Query: 335 acacaggtgcttaacgaggt 354 || |||||||| |||||||| Sbjct: 462 actcaggtgctgaacgaggt 481 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300267.1| Coffea arabica cultivar Alghe plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||| ||||||||||||||||||| ||| ||||| ||||| Sbjct: 402 tactatgacggacgctactggaccatgtggaagctgcctatgtacggctgcacggacgca 461 Query: 335 acacaggtgcttaacgaggt 354 || |||||||| |||||||| Sbjct: 462 actcaggtgctgaacgaggt 481 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|DQ300266.1| Coffea arabica cultivar Dilla plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 79.8 bits (40), Expect = 1e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||| ||||||||||||||||||| ||| ||||| ||||| Sbjct: 402 tactatgacggacgctactggaccatgtggaagctgcctatgtacggctgcacggacgca 461 Query: 335 acacaggtgcttaacgaggt 354 || |||||||| |||||||| Sbjct: 462 actcaggtgctgaacgaggt 481 Score = 46.1 bits (23), Expect = 0.18 Identities = 41/47 (87%) Strand = Plus / Plus Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcat 441 |||||||| ||||||||| | || |||||||||||| |||| ||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcat 568
>gb|M38318.1|CIPRBCS4 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-4) mRNA, complete cds Length = 747 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 |||||||| || || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 373 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 432 Query: 335 acacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgt 394 | ||||| || ||| | ||||||| |||||||| |||||||| || | | ||||| Sbjct: 433 tcccaggttgttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 492 Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||||| || ||||||||| |||| || || ||||| ||||| |||||||||| Sbjct: 493 atcataggattcgacaacgtgcgtcaagtccagtgtgtcagtttcatcgcct 544
>gb|L10215.1|CIP345RSS Mesembryanthemum crystallinum (clones: rbcs-3 and -4) rubisco small subunit genes, complete cds, (clone: rbcs-5) rubisco small submnit gene, partial cds Length = 8682 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 ||||| ||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 1163 tactatgacggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 1222 Query: 335 acacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgt 394 | ||||| || ||| | ||||||| |||||||| |||||||| || | | ||||| Sbjct: 1223 tcccaggttgttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 1282 Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 |||||||| ||||||||| |||| || || ||||| |||| |||||||||| Sbjct: 1283 atcatcggattcgacaacgtgcgtcaagtccagtgtatcagtttcatcgcct 1334 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 |||||||| || || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 3529 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 3588 Query: 335 acacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgt 394 | ||||| || ||| | ||||||| |||||||| |||||||| || | | ||||| Sbjct: 3589 tcccaggttgttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 3648 Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||||| || ||||||||| |||| || || ||||| ||||| |||||||||| Sbjct: 3649 atcataggattcgacaacgtgcgtcaagtccagtgtgtcagtttcatcgcct 3700 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 |||||||| || || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 7511 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 7570 Query: 335 acacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgt 394 | ||||| || ||| | ||||||| |||||||| |||||||| || | | ||||| Sbjct: 7571 tcccaggttgttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 7630 Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||||| || ||||||||| |||| || || ||||| ||||| |||||||||| Sbjct: 7631 atcataggattcgacaacgtgcgtcaagtccagtgtgtcagtttcatcgcct 7682
>gb|L10212.1|CIP1RSS Mesembryanthemum crystallinum (clone: rbcs-1) rubisco small subunit gene, complete cds Length = 3552 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 |||||||| || || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 2349 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 2408 Query: 335 acacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgt 394 | |||||| | ||| | ||||||| |||||||| |||||||| || | | ||||| Sbjct: 2409 tcccaggtggtcgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 2468 Query: 395 atcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 |||||||| ||||||||| |||| || || ||||| |||| |||||||||| Sbjct: 2469 atcatcggattcgacaacgtgcgtcaagtacagtgtatcagtttcatcgcct 2520
>gb|AY267350.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS1) mRNA, complete cds Length = 735 Score = 77.8 bits (39), Expect = 5e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| |||||||||||||||||||| |||||||||| ||||||||| Sbjct: 354 cccggatactatgacggaagatactggacaatgtggaagttgcctatgtttggatgcacc 413 Query: 329 gac 331 ||| Sbjct: 414 gac 416 Score = 54.0 bits (27), Expect = 7e-04 Identities = 69/83 (83%) Strand = Plus / Plus Query: 364 caagaaggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggt 423 |||||||||||||||| | || | ||||||||||||| ||||||||| | || || || Sbjct: 449 caagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgttcgtcaagt 508 Query: 424 gcagtgcgtcagcttcatcgcct 446 ||| |||||||| ||||| |||| Sbjct: 509 gcaatgcgtcagtttcattgcct 531
>gb|AY023648.1| Oryza sativa microsatellite MRG5973 containing (TTC)X13, closest to marker S10704, genomic sequence Length = 239 Score = 77.8 bits (39), Expect = 5e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 186 aggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacc 240 ||||||||||||||||||| |||||||||||||||||||| || ||| ||||||| Sbjct: 173 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccacc 227 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 141 ccagcctcggcagggtcagcaatggcggaaggatcaggtgcatgcaggt 189 ||||| |||||| |||||||||||||| |||||||||||||||||||| Sbjct: 25 ccagcttcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggt 73
>gb|AY273795.1| Citrus limon ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, partial cds; nuclear gene for chloroplast product Length = 357 Score = 77.8 bits (39), Expect = 5e-11 Identities = 102/123 (82%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 |||||||||| |||| || || || |||||||| || || |||||||||||||||||||| Sbjct: 174 ccgtgagcaccacaggtcaccaggatactacgatggacgctactggacaatgtggaagct 233 Query: 310 gcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtcaagaa 369 ||| ||||| || ||||| || || |||||||| | || ||||| | ||||||| |||| Sbjct: 234 gcccatgtttgggtgcacagatgcaacacaggttttgaaggaggttggggaggtccagaa 293 Query: 370 gga 372 ||| Sbjct: 294 gga 296
>dbj|AB004883.1| Marchantia paleacea var. diptera mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 931 Score = 77.8 bits (39), Expect = 5e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| |||||||| |||||||||||||| ||||||||| |||| |||||||| |||||| Sbjct: 401 cccggatactacgatggccgatactggaccatgtggaagttgcccatgttcgggtgcacc 460 Query: 329 gac 331 ||| Sbjct: 461 gac 463
>gb|AF326774.1|AF326774 Larrea tridentata ribulose 1,5-bisphosphate carboxylase small subunit mRNA, partial cds Length = 322 Score = 77.8 bits (39), Expect = 5e-11 Identities = 105/126 (83%), Gaps = 2/126 (1%) Strand = Plus / Plus Query: 288 gatactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctta 347 |||||||||| ||||||||| |||| ||||| |||||||| || ||| |||||||| | Sbjct: 197 gatactggaccatgtggaagttgcccatgtttggatgcactgatgccgttcaggtgctga 256 Query: 348 acgaggtggaggaggtcaagaaggagtaccctgacgcttacgtccg--tatcatcggctt 405 ||||| | ||||||| |||||||| ||||| || |||| | |||| |||||||||||| Sbjct: 257 acgagctcgaggaggccaagaaggcttaccccgatgctttcatccggatatcatcggctt 316 Query: 406 cgacaa 411 |||||| Sbjct: 317 cgacaa 322
>emb|Y00431.1|HARBCS Sunflower rbcS gene for RuBP carboxylase small subunit (EC 4.1.1.39) (RuBP carboxylase=ribulose 1.5-bisphosphate carboxylase/oxygenase) Length = 1400 Score = 77.8 bits (39), Expect = 5e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 245 gtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgg 304 |||| ||||||| || ||| |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 1081 gtctaccgtgagaacgccagatcccccggatactatgacggaagatactggacaatgtgg 1140 Query: 305 aagctgcctatgttcggatgcaccgac 331 || ||||||||||||| ||||||||| Sbjct: 1141 aaattgcctatgttcggttgcaccgac 1167
>emb|X05079.1|HARUBISC Sunflower mRNA for ribulose 1,5-bisphosphate carboxylase RuBisCO SSU (E.C. 4.1.1.39) Length = 674 Score = 77.8 bits (39), Expect = 5e-11 Identities = 75/87 (86%) Strand = Plus / Plus Query: 245 gtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtgg 304 |||| ||||||| || ||| |||||||| ||||| ||||| ||||||||||||||||| Sbjct: 337 gtctaccgtgagaacgccagatcccccggatactatgacggaagatactggacaatgtgg 396 Query: 305 aagctgcctatgttcggatgcaccgac 331 || ||||||||||||| ||||||||| Sbjct: 397 aaattgcctatgttcggttgcaccgac 423
>emb|X05037.1|FTRBCR Flaveria trinervia mRNA for ribulose 1,5-biphosphate carboxylase Length = 752 Score = 77.8 bits (39), Expect = 5e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| |||||||||| ||||||||| |||||||||||||||||||| Sbjct: 350 cccggatactatgacggaagatactggacgatgtggaagttgcctatgttcggatgcacc 409 Query: 329 gac 331 ||| Sbjct: 410 gac 412
>gb|U29933.1|FPU29933 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS1) mRNA, complete cds Length = 743 Score = 77.8 bits (39), Expect = 5e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 269 cccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcacc 328 ||||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 357 cccggatactatgacggaagatactggacaatgtggaaattgcctatgttcggatgcacc 416 Query: 329 gac 331 ||| Sbjct: 417 gac 419
>gb|J03613.1|POTRBCS Potato (S.tuberosum) ribulose bisphosphate carboxylase (rbcS) mRNA, complete cds Length = 546 Score = 77.8 bits (39), Expect = 5e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 |||||||||||||||||| || || |||||||| || |||||||||| ||||||||| | Sbjct: 330 ccgtgagcacaacagctcaccaggatactacgatggtagatactggaccatgtggaagtt 389 Query: 310 gcctatgttcggatgcaccgacg 332 ||||||||| || ||||| |||| Sbjct: 390 gcctatgtttgggtgcactgacg 412
>gb|DQ245008.1| Zea mays clone 12172 mRNA sequence Length = 744 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 |||||||||| ||| ||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 359 ccgtgagcacggaagcacccccggatactacgatggccgttactggacaatgtggaagct 418 Query: 310 gcctatgttcggatgcac 327 || ||||||||||||| Sbjct: 419 tcccttgttcggatgcac 436
>gb|AY705444.1| Fagus sylvatica chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, complete cds; nuclear gene for chloroplast product Length = 562 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 ||||||| ||||||| || || |||||||| || || || |||||| ||||||||||| Sbjct: 334 ccgtgagaacaacaggtcaccagggtactatgatggacgttactgggtgatgtggaagct 393 Query: 310 gcctatgttcggatgcaccgacgccacacaggtg 343 ||| ||||| ||||||||||| |||||||||||| Sbjct: 394 gcccatgtttggatgcaccgatgccacacaggtg 427
>gb|L76557.1|SPIRBCS Spinacia oleracea chloroplast ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 756 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 |||||||||| ||| ||||| |||||||| ||||| || |||||||||||||||||| | Sbjct: 358 ccgtgagcaccacaattccccagggtactatgacggtcgttactggacaatgtggaagtt 417 Query: 310 gcctatgttcggatgcac 327 ||| |||||||| ||||| Sbjct: 418 gcccatgttcgggtgcac 435
>dbj|AB208643.1| Fragaria x ananassa FrRuBisCO19 pseudogene mRNA for RuBisCO small subunit Length = 306 Score = 75.8 bits (38), Expect = 2e-10 Identities = 158/197 (80%), Gaps = 1/197 (0%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 ||||||| || |||| || || || |||||||||||||| |||||||| |||||||| | Sbjct: 2 ccgtgagaaccacagttcaccgggatactacgacggccgctactggaccatgtggaa-tt 60 Query: 310 gcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtcaagaa 369 ||| ||||||||||||||||| | | || ||| | || ||| | ||||||| |||||| Sbjct: 61 gcccatgttcggatgcaccgantcttcccaagtgttgaaggagctcgaggaggccaagaa 120 Query: 370 ggagtaccctgacgcttacgtccgtatcatcggcttcgacaacctgcggcaggtgcagtg 429 || ||||| | |||| | ||||||||||||| |||||||| | || || || ||||| Sbjct: 121 ggcttacccaaatgctttcatccgtatcatcggattcgacaatgtccgtcaagttcagtg 180 Query: 430 cgtcagcttcatcgcct 446 | |||| |||||||||| Sbjct: 181 catcagtttcatcgcct 197
>gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 mRNA, complete cds Length = 772 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 ||||||||||||||| || || || |||||||| || || |||||||| ||||||||||| Sbjct: 355 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 414 Query: 310 gcctatgttcggatgcac 327 ||||||||| || ||||| Sbjct: 415 gcctatgtttggttgcac 432 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 390 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||||||||||||| ||||||||| | || || ||||||||| ||||||||||||||| Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcct 551
>gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 mRNA, complete cds Length = 830 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 ||||||||||||||| || || || |||||||| || || |||||||| ||||||||||| Sbjct: 355 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 414 Query: 310 gcctatgttcggatgcac 327 ||||||||| || ||||| Sbjct: 415 gcctatgtttggttgcac 432 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 390 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||||||||||||| ||||||||| | || || ||||||||| ||||||||||||||| Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcct 551
>gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS1 mRNA, complete cds Length = 750 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 ||||||||||||||| || || || |||||||| || || |||||||| ||||||||||| Sbjct: 355 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 414 Query: 310 gcctatgttcggatgcac 327 ||||||||| || ||||| Sbjct: 415 gcctatgtttggttgcac 432 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 390 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||||||||||||| ||||||||| | || || ||||||||| ||||||||||||||| Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcct 551
>gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 765 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 ||||||||||||||| || || || |||||||| || || |||||||| ||||||||||| Sbjct: 352 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 411 Query: 310 gcctatgttcggatgcac 327 ||||||||| || ||||| Sbjct: 412 gcctatgtttggttgcac 429 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 390 tccgtatcatcggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgcct 446 ||||||||||||| ||||||||| | || || ||||||||| ||||||||||||||| Sbjct: 492 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcct 548
>emb|X07367.1|BNRBCSSU B.napus mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit Length = 726 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 |||||||||| ||| ||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 352 ccgtgagcacggaagcacccccggatactacgatggccgttactggacaatgtggaagct 411 Query: 310 gcctatgttcggatgcac 327 || ||||||||||||| Sbjct: 412 tcccttgttcggatgcac 429
>emb|X97600.1|SORBCS2 S.oleracea mRNA for ribulose-1,5-bisphosphate carboxylase Length = 751 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 |||||||||| ||| ||||| |||||||| ||||| || |||||||||||||||||| | Sbjct: 356 ccgtgagcaccacaattccccagggtactatgacggtcgttactggacaatgtggaagtt 415 Query: 310 gcctatgttcggatgcac 327 ||| |||||||| ||||| Sbjct: 416 gcccatgttcgggtgcac 433
>emb|X55937.1|BNRBCSF1 Brassica napus rbcSF1 gene for ribulose-1,5-biphosphate carboxylase/oxygenase small subunit Length = 2006 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 |||||||||| ||| ||||||| |||||||| ||||| |||||||||||||||||||| Sbjct: 1309 ccgtgagcacggaagcacccccggatactacgatggccgttactggacaatgtggaagct 1368 Query: 310 gcctatgttcggatgcac 327 || ||||||||||||| Sbjct: 1369 tcccttgttcggatgcac 1386
>gb|AF162195.1|AF162195 Lactuca sativa ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit precursor, mRNA, complete cds Length = 956 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 266 tcccccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgc 325 |||||||| ||||| || || |||||||||||||||||||| ||||||||||||||||| Sbjct: 388 tcccccggatactatgatggaagatactggacaatgtggaagttgcctatgttcggatgc 447 Query: 326 ac 327 || Sbjct: 448 ac 449 Score = 73.8 bits (37), Expect = 8e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 243 tcgtcttccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgt 302 |||||| |||||||||| || ||||||||| ||||| || || || ||||||||||||| Sbjct: 853 tcgtctaccgtgagcaccaccactcccccggatactatgatggacgctactggacaatgt 912 Query: 303 ggaagctgcctatgttcggatgcac 327 ||||| |||||||||| || ||||| Sbjct: 913 ggaagttgcctatgtttgggtgcac 937
>dbj|D14001.1|LAURBCS Lettuce mRNA for riburose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 758 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 266 tcccccgggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgc 325 |||||||| ||||| || || |||||||||||||||||||| ||||||||||||||||| Sbjct: 380 tcccccggatactatgatggaagatactggacaatgtggaagttgcctatgttcggatgc 439 Query: 326 ac 327 || Sbjct: 440 ac 441
>dbj|AB006080.1| Fagus crenata mRNA for small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase, complete cds Length = 789 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 ||||||| ||||||| || || |||||||| || || || |||||| ||||||||||| Sbjct: 370 ccgtgagaacaacaggtcaccagggtactatgatggacgttactgggtgatgtggaagct 429 Query: 310 gcctatgttcggatgcaccgacgccacacaggtg 343 ||| ||||| ||||||||||| |||||||||||| Sbjct: 430 gcccatgtttggatgcaccgatgccacacaggtg 463
>gb|AF312228.1|AF312228 Citrus reticulata ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit precursor, gene, partial cds, nuclear gene for chloroplast product Length = 353 Score = 73.8 bits (37), Expect = 8e-10 Identities = 106/129 (82%) Strand = Plus / Plus Query: 250 ccgtgagcacaacagctcccccgggtactacgacggccgatactggacaatgtggaagct 309 |||||||||| ||||||| || || |||||||| || || |||||||||||||||||||| Sbjct: 159 ccgtgagcaccacagctcaccaggatactacgatggacgctactggacaatgtggaagct 218 Query: 310 gcctatgttcggatgcaccgacgccacacaggtgcttaacgaggtggaggaggtcaagaa 369 ||| |||| || ||||| || || || ||||| | || ||||| | ||||||| |||| Sbjct: 219 gcccatgtatgggtgcacagatgcaacccaggttttgaaggaggttggggaggtccagaa 278 Query: 370 ggagtaccc 378 ||| ||||| Sbjct: 279 ggaataccc 287
>emb|X84730.1|ASRBCS Artificial rbcS gene sequence Length = 420 Score = 73.8 bits (37), Expect = 8e-10 Identities = 124/153 (81%) Strand = Plus / Plus Query: 275 tactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 334 |||||||||||||| |||||||| ||||||||||| || ||||| || ||||||||||| Sbjct: 203 tactacgacggccgctactggactatgtggaagcttccaatgtttggttgcaccgacgct 262 Query: 335 acacaggtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgt 394 || ||||| || || || | ||||| | ||||| | ||||| ||||| | ||| ||| Sbjct: 263 acccaggtactgaaagaactcgaggaagctaagaaagcatacccggacgcgttcgtacgt 322 Query: 395 atcatcggcttcgacaacctgcggcaggtgcag 427 || ||||||||||| ||| | || ||||||||| Sbjct: 323 attatcggcttcgataacgttcgtcaggtgcag 355 Score = 44.1 bits (22), Expect = 0.70 Identities = 43/50 (86%) Strand = Plus / Plus Query: 182 atgcaggtgtggccgattgagggtatcaagaagttcgagaccctgtctta 231 ||||| || ||||| ||||| |||||||| || ||||| ||||||||||| Sbjct: 26 atgcaagtatggccaattgaaggtatcaaaaaattcgaaaccctgtctta 75
>gb|EF011075.1| Camellia sinensis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, complete cds Length = 769 Score = 71.9 bits (36), Expect = 3e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 272 gggtactacgacggccgatactggacaatgtggaagctgcctatgttcggatgcac 327 ||||||||||| || ||||||||||||||||||||||| || ||||| |||||||| Sbjct: 398 gggtactacgatgggcgatactggacaatgtggaagctacccatgtttggatgcac 453 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 111,961,001 Number of extensions: 6288655 Number of successful extensions: 134991 Number of sequences better than 10.0: 491 Number of HSP's gapped: 134802 Number of HSP's successfully gapped: 867 Length of query: 737 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 715 Effective length of database: 18,508,616,841 Effective search space: 13233661041315 Effective search space used: 13233661041315 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
