ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf52n14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103408:Os01g0805800 | 192 | 3e-49 | 2 | AK059963:Os01g0805800 | 192 | 3e-49 | 3 | AK100492:Os04g0487300 | 145 | 4e-35 | 4 | AK063339:Os12g0139500 | 123 | 2e-28 | 5 | Os11g0143400:Os11g0143400 | 121 | 9e-28 | 6 | AK072608:Os08g0320200 | 33 | 0.25 | 7 | Os06g0142600:Os06g0142600 | 30 | 2.2 | 8 | AK120950:Os08g0430000 | 29 | 6.3 | 9 | AK062394:Os01g0124100 | 29 | 6.3 | 10 | AK111194: | 28 | 8.2 | 11 | AK109765:Os03g0816400 | 28 | 8.2 | 12 | AK101843:Os03g0816400 | 28 | 8.2 | 13 | AK063101:Os03g0852600 | 28 | 8.2 |
|---|
>AK103408:Os01g0805800 | Length = 210 Score = 192 bits (489), Expect = 3e-49 Identities = 96/197 (48%), Positives = 136/197 (69%), Gaps = 1/197 (0%) Frame = +3 Query: 141 RLFRVRRTVLQMLRDRGYLVKDDEIKLSLYEFVQRYGDSVRRDEIVIHCEKDGDPNDKVD 320 RL R+RRTV+QMLRDRGYLV + E+ + +F+++YG+S R++++I+ K DP+D++ Sbjct: 14 RLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYKKNDPSDQIY 73 Query: 321 VFFLDESKTGLGVVRSCVDKMKQQNVTNGILILQKALSGPARTEVSQ-SKKYRLEVFQEG 497 VFF ++ K G+ ++ V+ MK +NV+ +L+LQ+ L+ AR+ + + K LE+FQE Sbjct: 74 VFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPKIHLEIFQEA 133 Query: 498 ELLVNITEHHLVPXXXXXXXXXXXXXXXXYTAHETQLPRIQLTDPVARYYGMKRGQVVKI 677 ELL+NI EH LVP YT ETQLPRIQ+TDP+ARYYG++RGQVVKI Sbjct: 134 ELLINIKEHVLVPEHQVLNNEEKKTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKI 193 Query: 678 TRKSEVAGEYETYRYVI 728 R SE AG Y TYRYV+ Sbjct: 194 IRPSETAGRYVTYRYVV 210
>AK059963:Os01g0805800 | Length = 210 Score = 192 bits (489), Expect = 3e-49 Identities = 96/197 (48%), Positives = 136/197 (69%), Gaps = 1/197 (0%) Frame = +3 Query: 141 RLFRVRRTVLQMLRDRGYLVKDDEIKLSLYEFVQRYGDSVRRDEIVIHCEKDGDPNDKVD 320 RL R+RRTV+QMLRDRGYLV + E+ + +F+++YG+S R++++I+ K DP+D++ Sbjct: 14 RLVRIRRTVMQMLRDRGYLVVEHELAMGRRDFLRKYGESFHREDLLINKYKKNDPSDQIY 73 Query: 321 VFFLDESKTGLGVVRSCVDKMKQQNVTNGILILQKALSGPARTEVSQ-SKKYRLEVFQEG 497 VFF ++ K G+ ++ V+ MK +NV+ +L+LQ+ L+ AR+ + + K LE+FQE Sbjct: 74 VFFPNDDKVGMKHIKKYVEMMKAENVSRAVLVLQQNLTPFARSFLQELEPKIHLEIFQEA 133 Query: 498 ELLVNITEHHLVPXXXXXXXXXXXXXXXXYTAHETQLPRIQLTDPVARYYGMKRGQVVKI 677 ELL+NI EH LVP YT ETQLPRIQ+TDP+ARYYG++RGQVVKI Sbjct: 134 ELLINIKEHVLVPEHQVLNNEEKKTLLERYTLKETQLPRIQITDPIARYYGLRRGQVVKI 193 Query: 678 TRKSEVAGEYETYRYVI 728 R SE AG Y TYRYV+ Sbjct: 194 IRPSETAGRYVTYRYVV 210
>AK100492:Os04g0487300 | Length = 167 Score = 145 bits (367), Expect = 4e-35 Identities = 80/165 (48%), Positives = 109/165 (66%), Gaps = 1/165 (0%) Frame = +3 Query: 117 MASDGDNKRLFRVRRTVLQMLRDRGYLVKDDEIKLSLYEFVQRYGDSVRRDEIVIHCEKD 296 MAS+ + RLFR+RRTV+QMLRDRGYLV + +I L +FV R+GD V RD +V K Sbjct: 1 MASEEETSRLFRIRRTVMQMLRDRGYLVTELDIDLPRGDFVARFGDPVDRDHLVFSRHKK 60 Query: 297 GDPNDKVDVFFLDESKTGLGVVRSCVDKMKQQNVTNGILILQKALSGPARTEVSQ-SKKY 473 + D++ VFF ++K G+ +RS V++MKQ++V NGIL++Q+ALS AR+ V + S+K+ Sbjct: 61 DNGADQIYVFFPKDAKPGVKTIRSYVERMKQESVFNGILVVQQALSAFARSAVQEVSQKF 120 Query: 474 RLEVFQEGELLVNITEHHLVPXXXXXXXXXXXXXXXXYTAHETQL 608 LEVFQE ELLVNI +H LVP YT ETQ+ Sbjct: 121 HLEVFQEAELLVNIKDHTLVPEHELLTPEQKKTLLERYTVKETQV 165
>AK063339:Os12g0139500 | Length = 227 Score = 123 bits (309), Expect = 2e-28 Identities = 68/198 (34%), Positives = 105/198 (53%) Frame = +3 Query: 132 DNKRLFRVRRTVLQMLRDRGYLVKDDEIKLSLYEFVQRYGDSVRRDEIVIHCEKDGDPND 311 ++ RLF RRT ++MLRDRGY V + EI +L EF + + + + DP+ Sbjct: 29 ESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLAFTTTLVSDPSK 88 Query: 312 KVDVFFLDESKTGLGVVRSCVDKMKQQNVTNGILILQKALSGPARTEVSQSKKYRLEVFQ 491 KV + F + +R + K++N++ +LILQ + AR + + K+++++FQ Sbjct: 89 KVQLVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKFKVDIFQ 148 Query: 492 EGELLVNITEHHLVPXXXXXXXXXXXXXXXXYTAHETQLPRIQLTDPVARYYGMKRGQVV 671 +LLVNIT+H L P Y ++QLPR+ TD VARYYG +G VV Sbjct: 149 ATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLETDAVARYYGFDKGTVV 208 Query: 672 KITRKSEVAGEYETYRYV 725 K+T E+ G+ YR V Sbjct: 209 KVTYDGELTGKRVAYRCV 226
>Os11g0143400:Os11g0143400 | Length = 227 Score = 121 bits (303), Expect = 9e-28 Identities = 67/198 (33%), Positives = 104/198 (52%) Frame = +3 Query: 132 DNKRLFRVRRTVLQMLRDRGYLVKDDEIKLSLYEFVQRYGDSVRRDEIVIHCEKDGDPND 311 ++ RLF RRT ++MLRDRGY V + EI +L EF + + + + DP+ Sbjct: 29 ESHRLFLARRTAMEMLRDRGYSVPEAEIARTLPEFRAWWAEKPGIERLAFTTTLVSDPSK 88 Query: 312 KVDVFFLDESKTGLGVVRSCVDKMKQQNVTNGILILQKALSGPARTEVSQSKKYRLEVFQ 491 KV + F + +R + K++N++ +LILQ + AR + + K+++++FQ Sbjct: 89 KVQLVFCPPEPVKIATIREIYLQTKEENLSRLVLILQSKILSRAREAIKEIFKFKVDIFQ 148 Query: 492 EGELLVNITEHHLVPXXXXXXXXXXXXXXXXYTAHETQLPRIQLTDPVARYYGMKRGQVV 671 +LLVNIT+H L P Y ++QLPR+ TD VARYYG +G VV Sbjct: 149 ATDLLVNITKHVLKPKHEVLSADQKAKLLKEYNVEDSQLPRMLETDAVARYYGFDKGTVV 208 Query: 672 KITRKSEVAGEYETYRYV 725 K+ E+ G+ YR V Sbjct: 209 KVIYDGELTGKRVAYRCV 226
>AK072608:Os08g0320200 | Length = 569 Score = 33.5 bits (75), Expect = 0.25 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%) Frame = -1 Query: 806 LRGISKGGTI*TPRTTSQALGML*GSDDVAVGLIFSGDFALPGDLHHLPTLHAVV----- 642 L+G ++GG + + A +L DDV + L++ +PGD HHL + AV Sbjct: 16 LQGDARGGE--EEQGAADAAAVLHHGDDVQLRLLYRTQLPVPGDQHHLGAVLAVQGLGDG 73 Query: 641 SCHRIRELNP 612 + R+R L P Sbjct: 74 AADRLRRLGP 83
>Os06g0142600:Os06g0142600 | Length = 760 Score = 30.4 bits (67), Expect = 2.2 Identities = 20/82 (24%), Positives = 36/82 (43%) Frame = -2 Query: 412 SMPLVTFCCFILSTQLLTTPKPVLDSSRKKTSTLSFGSPSFSQWMTISSRRTESPYRWTN 233 SMP+ F F + T P PV++ R + +G+ W++ + +R+ + Sbjct: 619 SMPMNYFPPFSIPVMNPTAPAPVVEQGRHPSMPQPYGNFEQQSWISCNMSHPSGIWRF-H 677 Query: 232 SYRDSLISSSFTRYPRSRSICN 167 + RDS +S P R C+ Sbjct: 678 ASRDSEAQASSASSPFDRFQCS 699
>AK120950:Os08g0430000 | Length = 1463 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%) Frame = -2 Query: 271 SSRRTESPYRWTN--SYRDSLI--SSSFTRYPRSRSICNTVRRTRNSRL 137 S R+ SP+ WT+ + R+ ++ SSS R+ RSRS N + R R+ Sbjct: 1229 SGSRSRSPHAWTSPRNRREVMVNGSSSLWRHSRSRSPPNYMTEVRMGRM 1277
>AK062394:Os01g0124100 | Length = 259 Score = 28.9 bits (63), Expect = 6.3 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = -2 Query: 775 ELPEQPLKPWECCE 734 + P QP KPW+CC+ Sbjct: 36 DAPPQPAKPWDCCD 49
>AK111194: | Length = 1053 Score = 28.5 bits (62), Expect = 8.2 Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 6/75 (8%) Frame = +3 Query: 216 KLSLY-EFVQRYGDSVRRDEIVIHCEKDGDPND-----KVDVFFLDESKTGLGVVRSCVD 377 KL LY E VQ Y ++ R++I+ C+K G PND + FF +++ + ++ Sbjct: 809 KLKLYHEIVQHYMENDARNKILAACKKYG-PNDPQLWVQALTFFAAKAEVCEKEIIQVLE 867 Query: 378 KMKQQNVTNGILILQ 422 +++ N+ ++++Q Sbjct: 868 NIERHNLLPPLMVVQ 882
>AK109765:Os03g0816400 | Length = 571 Score = 28.5 bits (62), Expect = 8.2 Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 3/84 (3%) Frame = +3 Query: 189 GYLVKDDEIKLSLYEFVQRYGDS---VRRDEIVIHCEKDGDPNDKVDVFFLDESKTGLGV 359 G+ DE+K S E V+ Y + + R +++H ++ P D V ++ SKT + Sbjct: 451 GFAYAKDEVKDSWQELVKEYVSTRVGLERVCLLVHTKRGMKPLDYELVDLMERSKTPYQI 510 Query: 360 VRSCVDKMKQQNVTNGILILQKAL 431 V + D + +V + +Q++L Sbjct: 511 VLTKTDLVFPIDVARRAVEIQESL 534
>AK101843:Os03g0816400 | Length = 571 Score = 28.5 bits (62), Expect = 8.2 Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 3/84 (3%) Frame = +3 Query: 189 GYLVKDDEIKLSLYEFVQRYGDS---VRRDEIVIHCEKDGDPNDKVDVFFLDESKTGLGV 359 G+ DE+K S E V+ Y + + R +++H ++ P D V ++ SKT + Sbjct: 451 GFAYAKDEVKDSWQELVKEYVSTRVGLERVCLLVHTKRGMKPLDYELVDLMERSKTPYQI 510 Query: 360 VRSCVDKMKQQNVTNGILILQKAL 431 V + D + +V + +Q++L Sbjct: 511 VLTKTDLVFPIDVARRAVEIQESL 534
>AK063101:Os03g0852600 | Length = 206 Score = 28.5 bits (62), Expect = 8.2 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 9/38 (23%) Frame = -3 Query: 201 SPGTRGLAASATPCAARGTAA---------CCPRRTPS 115 SP R LAA+A PCA RG A C R +PS Sbjct: 13 SPCARKLAAAAAPCARRGIPAPHQKKQATFCLMRASPS 50 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 24,002,931 Number of extensions: 520157 Number of successful extensions: 1851 Number of sequences better than 10.0: 13 Number of HSP's gapped: 1844 Number of HSP's successfully gapped: 13 Length of query: 346 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 245 Effective length of database: 11,355,714 Effective search space: 2782149930 Effective search space used: 2782149930 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
