| Clone Name | FLbaf52n10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK101502:Os02g0125700 | 37 | 0.037 | 2 | AK071006:Os02g0125700 | 37 | 0.037 | 3 | AK110053:Os04g0472900 | 35 | 0.18 | 4 | AK110636:Os05g0272300 | 32 | 1.2 | 5 | Os03g0682600:Os03g0682600 | 32 | 1.5 | 6 | Os07g0525000:Os07g0525000 | 32 | 2.0 | 7 | AK119750: | 32 | 2.0 | 8 | AK107635:Os09g0572500 | 32 | 2.0 | 9 | AK119200:Os02g0224300 | 31 | 2.6 | 10 | AK104958:Os02g0266300 | 31 | 2.6 | 11 | AK099890:Os02g0224300 | 31 | 2.6 | 12 | AK071896:Os02g0266300 | 31 | 2.6 | 13 | AK107984:Os04g0165000 | 31 | 3.4 | 14 | AK110282: | 30 | 5.8 | 15 | AK121969:Os08g0313200 | 30 | 5.8 | 16 | AK068404:Os03g0701900 | 30 | 5.8 | 17 | Os02g0794300:Os02g0794300 | 30 | 7.6 | 18 | AK110220: | 30 | 7.6 | 19 | AK107476:Os03g0136500 | 29 | 10.0 | 20 | AK106290:Os12g0614600 | 29 | 10.0 | 21 | AK102623:Os04g0280300 | 29 | 10.0 | 22 | AK068152:Os01g0662700 | 29 | 10.0 | 23 | Os03g0571900:Os03g0571900 | 29 | 10.0 | 24 | AK073208:Os01g0278600 | 29 | 10.0 | 25 | AK070514:Os01g0278600 | 29 | 10.0 |
|---|
>AK101502:Os02g0125700 | Length = 143 Score = 37.4 bits (85), Expect = 0.037 Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 6/113 (5%) Frame = -2 Query: 347 WRPTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASP--NPPRDLCR 174 WRP PPSP R SP A TRA A APA+++ A P PP L R Sbjct: 27 WRP--PPSPPRPR----SSPSPAAASTRAPTSSPSPPRASAPASASPAPPPGRPPWRLSR 80 Query: 173 RLLESAQIR--VARLTG-IVKPETNRRNNRDP-VAQCGVREASAAVVTGGEGR 27 R S + R TG +P + RR R P G R S T G R Sbjct: 81 RRRASRRPSRPPLRPTGPPSRPRSRRRRRRRPRCPSSGTRGGSTGRGTSGSSR 133
>AK071006:Os02g0125700 | Length = 143 Score = 37.4 bits (85), Expect = 0.037 Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 6/113 (5%) Frame = -2 Query: 347 WRPTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASP--NPPRDLCR 174 WRP PPSP R SP A TRA A APA+++ A P PP L R Sbjct: 27 WRP--PPSPPRPR----SSPSPAAASTRAPTSSPSPPRASAPASASPAPPPGRPPWRLSR 80 Query: 173 RLLESAQIR--VARLTG-IVKPETNRRNNRDP-VAQCGVREASAAVVTGGEGR 27 R S + R TG +P + RR R P G R S T G R Sbjct: 81 RRRASRRPSRPPLRPTGPPSRPRSRRRRRRRPRCPSSGTRGGSTGRGTSGSSR 133
>AK110053:Os04g0472900 | Length = 855 Score = 35.0 bits (79), Expect = 0.18 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = +3 Query: 201 ARYCTGRRGSCRRIARPPIPRSGVGITGALPLPSSNPSVTWGRGESGSPC 350 A Y + R + R++ RPPI VG+ GA LP + GRG + + C Sbjct: 425 AMYASDTRPTARQLWRPPIGVLEVGVLGAQGLPPMKTAADGGRGTTDAYC 474
>AK110636:Os05g0272300 | Length = 227 Score = 32.3 bits (72), Expect = 1.2 Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 5/73 (6%) Frame = +3 Query: 144 HSDLC*FEQASAQIARR-----IGARYCTGRRGSCRRIARPPIPRSGVGITGALPLPSSN 308 H DL ++ AS A R I A C+ R R ++ PP RS +G SS Sbjct: 58 HGDL--YDHASLLRAVRDTDVVISAPQCSRPRSLTRPVSSPPSRRSAAAASGG----SSP 111 Query: 309 PSVTWGRGESGSP 347 PS W RG + +P Sbjct: 112 PSSAWTRGAAPAP 124
>Os03g0682600:Os03g0682600 | Length = 894 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = -2 Query: 356 DGAWRPTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASPN 195 DGA P P++A + +G+ ++ A AR+ + SSA APA V P+ Sbjct: 57 DGAAAPVPALQPAEADVLSGEVETEMAAGMEAREGASSSSSASAPAVGEVEPPS 110
>Os07g0525000:Os07g0525000 | Length = 1532 Score = 31.6 bits (70), Expect = 2.0 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 4/82 (4%) Frame = -2 Query: 335 LPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASPNPPRDLCRR----L 168 L PS R A +R+ + R+ A A A +T P+PPR CRR Sbjct: 10 LSPSRRPPRDAAPRRRRATPPPSTPRNAAAACQRHAAAAVATPPPPSPPRAQCRRRRQIS 69 Query: 167 LESAQIRVARLTGIVKPETNRR 102 L +++ +R + P T RR Sbjct: 70 LHASRSLRSRSLSVAPPATRRR 91
>AK119750: | Length = 1213 Score = 31.6 bits (70), Expect = 2.0 Identities = 20/69 (28%), Positives = 31/69 (44%) Frame = -2 Query: 341 PTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASPNPPRDLCRRLLE 162 P P P+D+ + SP + Y + W A + PA A+ NP D LL Sbjct: 374 PFSVPRPTDSEVEPDSVMSPANQYD-LQIWAASTDAPQTPAALAAAASNPRGD----LLA 428 Query: 161 SAQIRVARL 135 + Q+ V++L Sbjct: 429 TIQVNVSKL 437
>AK107635:Os09g0572500 | Length = 541 Score = 31.6 bits (70), Expect = 2.0 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +3 Query: 210 CTGRRGSCRRIARPPIPRSGVGITG-ALPLPSSNPSVTWGRGESGSPCAITSAAESTYL 383 CTG R +RPP P SG T A P PS++ + G G P +A S+ + Sbjct: 421 CTGPRPRSSACSRPPAPTSGSSPTSEATPTPSTSSQLIPPPGLGGRPPPAPAAQASSIM 479
>AK119200:Os02g0224300 | Length = 197 Score = 31.2 bits (69), Expect = 2.6 Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 17/67 (25%) Frame = -2 Query: 341 PTLPPSPSDARIGAGQRQSPGDAY------------TRARDWRAG-DSSAGAPAT----S 213 P P +P+ + G GQ+QS GD Y T A A D SA APAT + Sbjct: 118 PPYPGAPAASHPGYGQQQSYGDPYGSGSYGQPAAYSTEATTAAASQDQSASAPATGAAPA 177 Query: 212 TVASPNP 192 T A+P P Sbjct: 178 TTAAPAP 184
>AK104958:Os02g0266300 | Length = 485 Score = 31.2 bits (69), Expect = 2.6 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = +3 Query: 1641 LHVEAWHALSEG-CCHVNVLYVKGKRCSCKDEE 1736 LH+ WHAL G C V+VL C KD+E Sbjct: 124 LHLAVWHALQSGDCSTVSVLLSYNADCYAKDDE 156
>AK099890:Os02g0224300 | Length = 421 Score = 31.2 bits (69), Expect = 2.6 Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 17/67 (25%) Frame = -2 Query: 341 PTLPPSPSDARIGAGQRQSPGDAY------------TRARDWRAG-DSSAGAPAT----S 213 P P +P+ + G GQ+QS GD Y T A A D SA APAT + Sbjct: 342 PPYPGAPAASHPGYGQQQSYGDPYGSGSYGQPAAYSTEATTAAASQDQSASAPATGAAPA 401 Query: 212 TVASPNP 192 T A+P P Sbjct: 402 TTAAPAP 408
>AK071896:Os02g0266300 | Length = 485 Score = 31.2 bits (69), Expect = 2.6 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = +3 Query: 1641 LHVEAWHALSEG-CCHVNVLYVKGKRCSCKDEE 1736 LH+ WHAL G C V+VL C KD+E Sbjct: 124 LHLAVWHALQSGDCSTVSVLLSYNADCYAKDDE 156
>AK107984:Os04g0165000 | Length = 276 Score = 30.8 bits (68), Expect = 3.4 Identities = 16/38 (42%), Positives = 19/38 (50%) Frame = +1 Query: 31 PSPPVTTAALASRTPHCATGSRLFLRLVSGFTMPVNLA 144 PSPPVT A + P + LV GF +PV LA Sbjct: 131 PSPPVTLAEITLAAPGSGGQDFYDVSLVDGFNVPVRLA 168
>AK110282: | Length = 1293 Score = 30.0 bits (66), Expect = 5.8 Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 14/125 (11%) Frame = -2 Query: 335 LPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASPNPPRDLCRRLLESA 156 +PP+P A A + G + T A +SA APA + AS + SA Sbjct: 339 VPPNPPPATTAAA---TAGSSTTTPAPASAPAASANAPANAPTASASASASASASASASA 395 Query: 155 QI-------RVARLTGIVKPET-------NRRNNRDPVAQCGVREASAAVVTGGEGRDSG 18 A G++KP + N A G A+AA G G D G Sbjct: 396 SASASASATEAANTNGLLKPPSALTATKPNGAAATAADAGAGAAAAAAAAAAAGSGDDGG 455 Query: 17 SVERF 3 + F Sbjct: 456 AGVEF 460
>AK121969:Os08g0313200 | Length = 235 Score = 30.0 bits (66), Expect = 5.8 Identities = 19/53 (35%), Positives = 24/53 (45%) Frame = -2 Query: 353 GAWRPTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASPN 195 G RP+LP P A AG R P A R A ++ G P ++VA N Sbjct: 18 GRRRPSLPSEPRLAAPAAGSRAPPSRASVRPSAAAAPLAARGLPHHASVAGQN 70
>AK068404:Os03g0701900 | Length = 261 Score = 30.0 bits (66), Expect = 5.8 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%) Frame = -2 Query: 230 GAPATSTVASPNPPRDLCRR---LLESAQIRVARLTGIVKPE-TNRRNNRDPVAQCGVRE 63 GAPA + P P R R L++ + + L+ +VK E T + + A+ E Sbjct: 39 GAPAAAGPGGPRPLRGFPRPAVDLVDQSAPKRRILSAVVKVEDTEAKEDVKKEAEAEGPE 98 Query: 62 ASAAVVTGGEGRDSG 18 +A GGE RD G Sbjct: 99 GGSAAAEGGERRDGG 113
>Os02g0794300:Os02g0794300 | Length = 1369 Score = 29.6 bits (65), Expect = 7.6 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%) Frame = -2 Query: 302 AGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASPNPPRDLCRRLLESAQIRVARLTGIV 123 +G +SPG A SS AP+ + S PP+ L R L + + + ++ Sbjct: 1069 SGDIESPGSANGNESQEENAGSSLDAPSNDSEKSA-PPKRLARTLSSPSPTKASSISSFT 1127 Query: 122 ---KPETNRRNNRDPVAQCGVREASAA 51 P +R PV+ C + +A Sbjct: 1128 PRRMPSPSRNRPSTPVSPCSSTRSDSA 1154
>AK110220: | Length = 1018 Score = 29.6 bits (65), Expect = 7.6 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Frame = -2 Query: 350 AWRPTL--PPSPSDARIGAGQRQSPGDAYTRARDWRA------GDSSAGAPATSTVASPN 195 ++RP L P PS+A + +G D + A RA S A PAT A+P+ Sbjct: 295 SFRPDLSVPSLPSEAALSSGTSLGRADTVSYAVSHRAELQRDEAASDAATPATVASAAPS 354 Query: 194 PPRDLCRRLLESAQIRVARLTGIVKPETNRRN 99 PR L + +++ A G K T + N Sbjct: 355 SPRRSSLSLDRNDRLQPASADG--KGSTQKLN 384
>AK107476:Os03g0136500 | Length = 125 Score = 29.3 bits (64), Expect = 10.0 Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 12/84 (14%) Frame = -2 Query: 419 GRCMSRGYTTSF*ICRFRG*CDGAWRPTLPPSPSDARIGAGQRQSPGDAYTRA------- 261 GR SRG+T+ RG C R PS + G +P A T A Sbjct: 18 GRSPSRGWTS-------RG-CGSRRRTRSAPSSRRSTTGGSSGSAPASAATPAAASSATS 69 Query: 260 -----RDWRAGDSSAGAPATSTVA 204 R W A SS APA S++A Sbjct: 70 TTTGRRPWTAPASSGWAPARSSLA 93
>AK106290:Os12g0614600 | Length = 484 Score = 29.3 bits (64), Expect = 10.0 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 4/68 (5%) Frame = -2 Query: 359 CDGAWRPTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGA--PATSTVASPNPPR 186 C R + SPS A A SP A R R+GD + A A++T A+P PR Sbjct: 50 CSSLSRLSFDCSPSAAVAAAATSCSPPRASVLLRPHRSGDVAWAAIRAASTTSAAPLGPR 109 Query: 185 D--LCRRL 168 D L RR+ Sbjct: 110 DFKLVRRI 117
>AK102623:Os04g0280300 | Length = 198 Score = 29.3 bits (64), Expect = 10.0 Identities = 19/53 (35%), Positives = 20/53 (37%) Frame = -2 Query: 368 RG*CDGAWRPTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATST 210 RG C WRP P P AG G+ YTR R W S A T Sbjct: 32 RGCCCCVWRPGGCPVPV-----AGTGTGTGEIYTRVRGWGGWRSIFSAAGVGT 79
>AK068152:Os01g0662700 | Length = 331 Score = 29.3 bits (64), Expect = 10.0 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -2 Query: 341 PTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAG 228 PTL PSP+ + R+ GD + +WRA +G Sbjct: 28 PTLAPSPAASPASDSYRRVHGDVPSEPPEWRAATDESG 65
>Os03g0571900:Os03g0571900 | Length = 1098 Score = 29.3 bits (64), Expect = 10.0 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%) Frame = +1 Query: 853 IKRYLLKMKLEPMKCT--VSLVKYMRFVNTE*CLFVLRRRICRYYGERADT*FPQLT*AT 1026 ++RY LKM P+KC VS K++ F+ E + + ++I + +A T ++ Sbjct: 118 MRRYGLKMN--PLKCAFGVSAGKFLGFMVHERGVEIYPKKIEKIRDFKAPTCKKEVQKLL 175 Query: 1027 GKIKSRKRYICHMYGK 1074 GK+ +R+I ++ GK Sbjct: 176 GKVNYLRRFISNLAGK 191
>AK073208:Os01g0278600 | Length = 470 Score = 29.3 bits (64), Expect = 10.0 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = +1 Query: 10 STLPESRPSPPVTTAALASRTPHCATGSRLFLRLVSGFTMPVNLATLICADSSRR 174 S+ PE+RP PP T A A A G+ +L +N+ ++ ++ RR Sbjct: 46 SSEPETRPRPPPATPATAEEPAATAAGAEARAQLA------INIRRMLAVEAERR 94
>AK070514:Os01g0278600 | Length = 470 Score = 29.3 bits (64), Expect = 10.0 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = +1 Query: 10 STLPESRPSPPVTTAALASRTPHCATGSRLFLRLVSGFTMPVNLATLICADSSRR 174 S+ PE+RP PP T A A A G+ +L +N+ ++ ++ RR Sbjct: 46 SSEPETRPRPPPATPATAEEPAATAAGAEARAQLA------INIRRMLAVEAERR 94 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 53,417,765 Number of extensions: 1223339 Number of successful extensions: 3791 Number of sequences better than 10.0: 25 Number of HSP's gapped: 3787 Number of HSP's successfully gapped: 25 Length of query: 627 Length of database: 15,399,855 Length adjustment: 107 Effective length of query: 520 Effective length of database: 11,115,468 Effective search space: 5780043360 Effective search space used: 5780043360 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)