ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf52n10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK101502:Os02g0125700 37 0.037
2AK071006:Os02g0125700 37 0.037
3AK110053:Os04g0472900 35 0.18
4AK110636:Os05g0272300 32 1.2
5Os03g0682600:Os03g0682600 32 1.5
6Os07g0525000:Os07g0525000 32 2.0
7AK119750: 32 2.0
8AK107635:Os09g0572500 32 2.0
9AK119200:Os02g0224300 31 2.6
10AK104958:Os02g0266300 31 2.6
11AK099890:Os02g0224300 31 2.6
12AK071896:Os02g0266300 31 2.6
13AK107984:Os04g0165000 31 3.4
14AK110282: 30 5.8
15AK121969:Os08g0313200 30 5.8
16AK068404:Os03g0701900 30 5.8
17Os02g0794300:Os02g0794300 30 7.6
18AK110220: 30 7.6
19AK107476:Os03g0136500 29 10.0
20AK106290:Os12g0614600 29 10.0
21AK102623:Os04g0280300 29 10.0
22AK068152:Os01g0662700 29 10.0
23Os03g0571900:Os03g0571900 29 10.0
24AK073208:Os01g0278600 29 10.0
25AK070514:Os01g0278600 29 10.0

>AK101502:Os02g0125700 |
          Length = 143
 Score = 37.4 bits (85), Expect = 0.037
 Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 6/113 (5%)
 Frame = -2

Query: 347 WRPTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASP--NPPRDLCR 174
           WRP  PPSP   R       SP  A TRA         A APA+++ A P   PP  L R
Sbjct: 27  WRP--PPSPPRPR----SSPSPAAASTRAPTSSPSPPRASAPASASPAPPPGRPPWRLSR 80

Query: 173 RLLESAQIR--VARLTG-IVKPETNRRNNRDP-VAQCGVREASAAVVTGGEGR 27
           R   S +      R TG   +P + RR  R P     G R  S    T G  R
Sbjct: 81  RRRASRRPSRPPLRPTGPPSRPRSRRRRRRRPRCPSSGTRGGSTGRGTSGSSR 133



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>AK071006:Os02g0125700 |
          Length = 143

 Score = 37.4 bits (85), Expect = 0.037
 Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 6/113 (5%)
 Frame = -2

Query: 347 WRPTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASP--NPPRDLCR 174
           WRP  PPSP   R       SP  A TRA         A APA+++ A P   PP  L R
Sbjct: 27  WRP--PPSPPRPR----SSPSPAAASTRAPTSSPSPPRASAPASASPAPPPGRPPWRLSR 80

Query: 173 RLLESAQIR--VARLTG-IVKPETNRRNNRDP-VAQCGVREASAAVVTGGEGR 27
           R   S +      R TG   +P + RR  R P     G R  S    T G  R
Sbjct: 81  RRRASRRPSRPPLRPTGPPSRPRSRRRRRRRPRCPSSGTRGGSTGRGTSGSSR 133



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>AK110053:Os04g0472900 |
          Length = 855

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +3

Query: 201 ARYCTGRRGSCRRIARPPIPRSGVGITGALPLPSSNPSVTWGRGESGSPC 350
           A Y +  R + R++ RPPI    VG+ GA  LP    +   GRG + + C
Sbjct: 425 AMYASDTRPTARQLWRPPIGVLEVGVLGAQGLPPMKTAADGGRGTTDAYC 474



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>AK110636:Os05g0272300 |
          Length = 227

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
 Frame = +3

Query: 144 HSDLC*FEQASAQIARR-----IGARYCTGRRGSCRRIARPPIPRSGVGITGALPLPSSN 308
           H DL  ++ AS   A R     I A  C+  R   R ++ PP  RS    +G     SS 
Sbjct: 58  HGDL--YDHASLLRAVRDTDVVISAPQCSRPRSLTRPVSSPPSRRSAAAASGG----SSP 111

Query: 309 PSVTWGRGESGSP 347
           PS  W RG + +P
Sbjct: 112 PSSAWTRGAAPAP 124



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>Os03g0682600:Os03g0682600 |
          Length = 894

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -2

Query: 356 DGAWRPTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASPN 195
           DGA  P     P++A + +G+ ++   A   AR+  +  SSA APA   V  P+
Sbjct: 57  DGAAAPVPALQPAEADVLSGEVETEMAAGMEAREGASSSSSASAPAVGEVEPPS 110



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>Os07g0525000:Os07g0525000 |
          Length = 1532

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
 Frame = -2

Query: 335 LPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASPNPPRDLCRR----L 168
           L PS    R  A +R+      +  R+  A      A A +T   P+PPR  CRR     
Sbjct: 10  LSPSRRPPRDAAPRRRRATPPPSTPRNAAAACQRHAAAAVATPPPPSPPRAQCRRRRQIS 69

Query: 167 LESAQIRVARLTGIVKPETNRR 102
           L +++   +R   +  P T RR
Sbjct: 70  LHASRSLRSRSLSVAPPATRRR 91



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>AK119750: |
          Length = 1213

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = -2

Query: 341 PTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASPNPPRDLCRRLLE 162
           P   P P+D+ +      SP + Y   + W A   +   PA    A+ NP  D    LL 
Sbjct: 374 PFSVPRPTDSEVEPDSVMSPANQYD-LQIWAASTDAPQTPAALAAAASNPRGD----LLA 428

Query: 161 SAQIRVARL 135
           + Q+ V++L
Sbjct: 429 TIQVNVSKL 437



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>AK107635:Os09g0572500 |
          Length = 541

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +3

Query: 210 CTGRRGSCRRIARPPIPRSGVGITG-ALPLPSSNPSVTWGRGESGSPCAITSAAESTYL 383
           CTG R      +RPP P SG   T  A P PS++  +    G  G P    +A  S+ +
Sbjct: 421 CTGPRPRSSACSRPPAPTSGSSPTSEATPTPSTSSQLIPPPGLGGRPPPAPAAQASSIM 479



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>AK119200:Os02g0224300 |
          Length = 197

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 17/67 (25%)
 Frame = -2

Query: 341 PTLPPSPSDARIGAGQRQSPGDAY------------TRARDWRAG-DSSAGAPAT----S 213
           P  P +P+ +  G GQ+QS GD Y            T A    A  D SA APAT    +
Sbjct: 118 PPYPGAPAASHPGYGQQQSYGDPYGSGSYGQPAAYSTEATTAAASQDQSASAPATGAAPA 177

Query: 212 TVASPNP 192
           T A+P P
Sbjct: 178 TTAAPAP 184



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>AK104958:Os02g0266300 |
          Length = 485

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 1641 LHVEAWHALSEG-CCHVNVLYVKGKRCSCKDEE 1736
            LH+  WHAL  G C  V+VL      C  KD+E
Sbjct: 124  LHLAVWHALQSGDCSTVSVLLSYNADCYAKDDE 156



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>AK099890:Os02g0224300 |
          Length = 421

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 17/67 (25%)
 Frame = -2

Query: 341 PTLPPSPSDARIGAGQRQSPGDAY------------TRARDWRAG-DSSAGAPAT----S 213
           P  P +P+ +  G GQ+QS GD Y            T A    A  D SA APAT    +
Sbjct: 342 PPYPGAPAASHPGYGQQQSYGDPYGSGSYGQPAAYSTEATTAAASQDQSASAPATGAAPA 401

Query: 212 TVASPNP 192
           T A+P P
Sbjct: 402 TTAAPAP 408



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>AK071896:Os02g0266300 |
          Length = 485

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +3

Query: 1641 LHVEAWHALSEG-CCHVNVLYVKGKRCSCKDEE 1736
            LH+  WHAL  G C  V+VL      C  KD+E
Sbjct: 124  LHLAVWHALQSGDCSTVSVLLSYNADCYAKDDE 156



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>AK107984:Os04g0165000 |
          Length = 276

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = +1

Query: 31  PSPPVTTAALASRTPHCATGSRLFLRLVSGFTMPVNLA 144
           PSPPVT A +    P         + LV GF +PV LA
Sbjct: 131 PSPPVTLAEITLAAPGSGGQDFYDVSLVDGFNVPVRLA 168



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>AK110282: |
          Length = 1293

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 32/125 (25%), Positives = 44/125 (35%), Gaps = 14/125 (11%)
 Frame = -2

Query: 335 LPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASPNPPRDLCRRLLESA 156
           +PP+P  A   A    + G + T      A  +SA APA +  AS +           SA
Sbjct: 339 VPPNPPPATTAAA---TAGSSTTTPAPASAPAASANAPANAPTASASASASASASASASA 395

Query: 155 QI-------RVARLTGIVKPET-------NRRNNRDPVAQCGVREASAAVVTGGEGRDSG 18
                      A   G++KP +       N        A  G   A+AA    G G D G
Sbjct: 396 SASASASATEAANTNGLLKPPSALTATKPNGAAATAADAGAGAAAAAAAAAAAGSGDDGG 455

Query: 17  SVERF 3
           +   F
Sbjct: 456 AGVEF 460



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>AK121969:Os08g0313200 |
          Length = 235

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -2

Query: 353 GAWRPTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASPN 195
           G  RP+LP  P  A   AG R  P  A  R     A  ++ G P  ++VA  N
Sbjct: 18  GRRRPSLPSEPRLAAPAAGSRAPPSRASVRPSAAAAPLAARGLPHHASVAGQN 70



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>AK068404:Os03g0701900 |
          Length = 261

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = -2

Query: 230 GAPATSTVASPNPPRDLCRR---LLESAQIRVARLTGIVKPE-TNRRNNRDPVAQCGVRE 63
           GAPA +    P P R   R    L++ +  +   L+ +VK E T  + +    A+    E
Sbjct: 39  GAPAAAGPGGPRPLRGFPRPAVDLVDQSAPKRRILSAVVKVEDTEAKEDVKKEAEAEGPE 98

Query: 62  ASAAVVTGGEGRDSG 18
             +A   GGE RD G
Sbjct: 99  GGSAAAEGGERRDGG 113



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>Os02g0794300:Os02g0794300 |
          Length = 1369

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
 Frame = -2

Query: 302  AGQRQSPGDAYTRARDWRAGDSSAGAPATSTVASPNPPRDLCRRLLESAQIRVARLTGIV 123
            +G  +SPG A           SS  AP+  +  S  PP+ L R L   +  + + ++   
Sbjct: 1069 SGDIESPGSANGNESQEENAGSSLDAPSNDSEKSA-PPKRLARTLSSPSPTKASSISSFT 1127

Query: 122  ---KPETNRRNNRDPVAQCGVREASAA 51
                P  +R     PV+ C    + +A
Sbjct: 1128 PRRMPSPSRNRPSTPVSPCSSTRSDSA 1154



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>AK110220: |
          Length = 1018

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
 Frame = -2

Query: 350 AWRPTL--PPSPSDARIGAGQRQSPGDAYTRARDWRA------GDSSAGAPATSTVASPN 195
           ++RP L  P  PS+A + +G      D  + A   RA        S A  PAT   A+P+
Sbjct: 295 SFRPDLSVPSLPSEAALSSGTSLGRADTVSYAVSHRAELQRDEAASDAATPATVASAAPS 354

Query: 194 PPRDLCRRLLESAQIRVARLTGIVKPETNRRN 99
            PR     L  + +++ A   G  K  T + N
Sbjct: 355 SPRRSSLSLDRNDRLQPASADG--KGSTQKLN 384



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>AK107476:Os03g0136500 |
          Length = 125

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 27/84 (32%), Positives = 33/84 (39%), Gaps = 12/84 (14%)
 Frame = -2

Query: 419 GRCMSRGYTTSF*ICRFRG*CDGAWRPTLPPSPSDARIGAGQRQSPGDAYTRA------- 261
           GR  SRG+T+       RG C    R    PS   +  G     +P  A T A       
Sbjct: 18  GRSPSRGWTS-------RG-CGSRRRTRSAPSSRRSTTGGSSGSAPASAATPAAASSATS 69

Query: 260 -----RDWRAGDSSAGAPATSTVA 204
                R W A  SS  APA S++A
Sbjct: 70  TTTGRRPWTAPASSGWAPARSSLA 93



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>AK106290:Os12g0614600 |
          Length = 484

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = -2

Query: 359 CDGAWRPTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGA--PATSTVASPNPPR 186
           C    R +   SPS A   A    SP  A    R  R+GD +  A   A++T A+P  PR
Sbjct: 50  CSSLSRLSFDCSPSAAVAAAATSCSPPRASVLLRPHRSGDVAWAAIRAASTTSAAPLGPR 109

Query: 185 D--LCRRL 168
           D  L RR+
Sbjct: 110 DFKLVRRI 117



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>AK102623:Os04g0280300 |
          Length = 198

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 19/53 (35%), Positives = 20/53 (37%)
 Frame = -2

Query: 368 RG*CDGAWRPTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAGAPATST 210
           RG C   WRP   P P      AG     G+ YTR R W    S   A    T
Sbjct: 32  RGCCCCVWRPGGCPVPV-----AGTGTGTGEIYTRVRGWGGWRSIFSAAGVGT 79



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>AK068152:Os01g0662700 |
          Length = 331

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 341 PTLPPSPSDARIGAGQRQSPGDAYTRARDWRAGDSSAG 228
           PTL PSP+ +      R+  GD  +   +WRA    +G
Sbjct: 28  PTLAPSPAASPASDSYRRVHGDVPSEPPEWRAATDESG 65



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>Os03g0571900:Os03g0571900 |
          Length = 1098

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
 Frame = +1

Query: 853  IKRYLLKMKLEPMKCT--VSLVKYMRFVNTE*CLFVLRRRICRYYGERADT*FPQLT*AT 1026
            ++RY LKM   P+KC   VS  K++ F+  E  + +  ++I +    +A T   ++    
Sbjct: 118  MRRYGLKMN--PLKCAFGVSAGKFLGFMVHERGVEIYPKKIEKIRDFKAPTCKKEVQKLL 175

Query: 1027 GKIKSRKRYICHMYGK 1074
            GK+   +R+I ++ GK
Sbjct: 176  GKVNYLRRFISNLAGK 191



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>AK073208:Os01g0278600 |
          Length = 470

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +1

Query: 10  STLPESRPSPPVTTAALASRTPHCATGSRLFLRLVSGFTMPVNLATLICADSSRR 174
           S+ PE+RP PP  T A A      A G+    +L       +N+  ++  ++ RR
Sbjct: 46  SSEPETRPRPPPATPATAEEPAATAAGAEARAQLA------INIRRMLAVEAERR 94



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>AK070514:Os01g0278600 |
          Length = 470

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +1

Query: 10  STLPESRPSPPVTTAALASRTPHCATGSRLFLRLVSGFTMPVNLATLICADSSRR 174
           S+ PE+RP PP  T A A      A G+    +L       +N+  ++  ++ RR
Sbjct: 46  SSEPETRPRPPPATPATAEEPAATAAGAEARAQLA------INIRRMLAVEAERR 94


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 53,417,765
Number of extensions: 1223339
Number of successful extensions: 3791
Number of sequences better than 10.0: 25
Number of HSP's gapped: 3787
Number of HSP's successfully gapped: 25
Length of query: 627
Length of database: 15,399,855
Length adjustment: 107
Effective length of query: 520
Effective length of database: 11,115,468
Effective search space: 5780043360
Effective search space used: 5780043360
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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