| Clone Name | FLbaf52n10 |
|---|---|
| Clone Library Name | barley_pub |
>Q9GLP0:ITB1_PIG Integrin beta-1 precursor - Sus scrofa (Pig)| Length = 798 Score = 33.9 bits (76), Expect = 2.4 Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 9/88 (10%) Frame = +2 Query: 1541 NGLCTCYTILNVV*REKILVVCPCN--FLG-------DIPSSIACRGLACAFRRMLSCEC 1693 NG+C C VC CN + G D S +A G C R + CEC Sbjct: 571 NGVCKCR-------------VCECNPNYTGSACDCSLDTTSCMAVNGQICNGRGV--CEC 615 Query: 1694 SVCKGKAMQLQG*RVKPCLGSLYKCMQH 1777 VCK + QG + C L C +H Sbjct: 616 GVCKCTDPKFQGPTCEMCQTCLGVCAEH 643
>Q96KW2:PO122_HUMAN POM121-like protein 2 - Homo sapiens (Human)| Length = 971 Score = 33.5 bits (75), Expect = 3.2 Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = +3 Query: 258 PRSGVGITGALPLPSSNPSVTWGRGESGSPCAITSAAESTYLKRGSVSTRHA-SPIA 425 P SG GALP ++N + +G+G S + + S + L RGS+S R +PIA Sbjct: 850 PTSGAFSIGALPSGTTNTMIPFGKGWSQNTEGLPSHRTAFSLGRGSISARKTMAPIA 906
>O95466:FMNL_HUMAN Formin-like protein 1 - Homo sapiens (Human)| Length = 1100 Score = 33.1 bits (74), Expect = 4.1 Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 1/66 (1%) Frame = -3 Query: 448 QSLSRVAMAMGDACRVDTLPLFRYVDSAADVMAHGDPL-SPLPQVTLGLELGKGKAPVMP 272 + L R+ GDA ++ LP+ S D G P SP P + E G AP P Sbjct: 486 KGLIRILRGPGDAVSIEILPVAVATPSGGDAPTPGVPTGSPSPDLAPAAEPAPGAAPPPP 545 Query: 271 TPERGI 254 P G+ Sbjct: 546 PPLPGL 551
>P53713:ITB1_FELCA Integrin beta-1 precursor - Felis silvestris catus (Cat)| Length = 798 Score = 32.3 bits (72), Expect = 7.0 Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 9/88 (10%) Frame = +2 Query: 1541 NGLCTCYTILNVV*REKILVVCPCN--FLG-------DIPSSIACRGLACAFRRMLSCEC 1693 NG+C C VC CN + G D S +A G C R + CEC Sbjct: 571 NGVCKCR-------------VCECNPNYTGSACDCSLDTTSCMATNGQICNGRGI--CEC 615 Query: 1694 SVCKGKAMQLQG*RVKPCLGSLYKCMQH 1777 CK + QG + C L C +H Sbjct: 616 GACKCTDPKFQGPTCEMCQTCLGVCAEH 643
>P53712:ITB1_BOVIN Integrin beta-1 precursor - Bos taurus (Bovine)| Length = 798 Score = 32.3 bits (72), Expect = 7.0 Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 9/88 (10%) Frame = +2 Query: 1541 NGLCTCYTILNVV*REKILVVCPCN--FLG-------DIPSSIACRGLACAFRRMLSCEC 1693 NG+C C VC CN + G D S +A G C R + CEC Sbjct: 571 NGVCKCR-------------VCECNPNYTGSACDCSLDTTSCMAVNGQICNGRGV--CEC 615 Query: 1694 SVCKGKAMQLQG*RVKPCLGSLYKCMQH 1777 CK + QG + C L C +H Sbjct: 616 GACKCTDPKFQGPTCEMCQTCLGVCAEH 643
>O60347:TBC12_HUMAN TBC1 domain family member 12 - Homo sapiens (Human)| Length = 775 Score = 32.3 bits (72), Expect = 7.1 Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Frame = +1 Query: 235 DESPARQSLARV*AS------PGLCLCPAPIRASLGEGGRVGLHAPSHQPRN 372 +E+P RQ L R A+ PGLC CP P G+ G PS PR+ Sbjct: 62 EETPPRQLLQRYLAAAGEQLEPGLCYCPLP-------AGQAGAPPPSAAPRS 106 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 329,356,715 Number of extensions: 7272839 Number of successful extensions: 17232 Number of sequences better than 10.0: 6 Number of HSP's gapped: 17210 Number of HSP's successfully gapped: 6 Length of query: 627 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 508 Effective length of database: 68,045,334 Effective search space: 34567029672 Effective search space used: 34567029672 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)