ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf50e24 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os09g31180:12009.t02760:unspliced-genomic 60S ribosomal protein L9, putative, expressed| Length = 2338 Score = 257 bits (556), Expect(3) = 1e-99 Identities = 108/125 (86%), Positives = 118/125 (94%) Frame = +1 / +1 Query: 88 AKMKTILASETMDIPEEVTVKVSAKMISVTGPRGTLTRNFKHLNLDFQLQDGGRKLKVDA 267 AKMKTILASETM+IPE VTV+V+AK+++V GPRG LTRNFKHLNLDFQL +GGRKL+VDA Sbjct: 109 AKMKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDA 288 Query: 268 WFGTRRTMAAIRTAISHVQNLITGVTKGFRYKMRFVYAHFPINASITAANRGIEIRNFLG 447 WFGTRRTMAAIRTAISHVQNLITGVTKG+RYKMRFVYAHFPINASIT +N IEIRNFLG Sbjct: 289 WFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLG 468 Query: 448 EKKVR 462 EKKVR Sbjct: 469 EKKVR 483 Score = 89.5 bits (189), Expect(3) = 1e-99 Identities = 39/42 (92%), Positives = 42/42 (100%) Frame = +1 / +1 Query: 454 KVRKVDMLDGVTILRSEKVKDEIVLDGNDIELVSRSAALINQ 579 +VRKVDML+GVTILRSEKVKDE+VLDGNDIELVSRSAALINQ Sbjct: 589 QVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQ 714 Score = 64.8 bits (135), Expect(3) = 1e-99 Identities = 25/28 (89%), Positives = 26/28 (92%) Frame = +1 / +3 Query: 577 QKCHVKNKDIRKFLDGIYVSDKGAIKEE 660 QKCHVKNKDIRKFLDGIYVSDKG I E+ Sbjct: 1446 QKCHVKNKDIRKFLDGIYVSDKGTITED 1529 Score = 199 bits (428), Expect(3) = 2e-79 Identities = 93/130 (71%), Positives = 97/130 (74%) Frame = -1 / -3 Query: 476 SMSTFLTFFSPRKFLISMPRLAAVMDALMGKWA*TKRIL*RKPLVTPVMRFWTWEXXXXX 297 S FLTFFSP+KFLISM L VM+ALMGK A*TKRIL*R PLVTPVMRFWTWE Sbjct: 497 SKGGFLTFFSPKKFLISMAVLELVMEALMGK*A*TKRIL*R*PLVTPVMRFWTWEMAVRM 318 Query: 296 XXXXXXVPNQASTLSFRPPSCSWKSRLRCLKLRVRVPRGPVTEIIFADTFTVTSSGMSIV 117 VPN AST S RPPS SWKSRLRCLKLRV PRGP T FA T TVT SG+SIV Sbjct: 317 AAMVRRVPNHASTCSLRPPSSSWKSRLRCLKLRVSFPRGPSTVTTFAATCTVTPSGISIV 138 Query: 116 SDARIVFIFA 87 SDAR+VFIFA Sbjct: 137 SDARMVFIFA 108 Score = 83.5 bits (176), Expect(3) = 2e-79 Identities = 35/41 (85%), Positives = 39/41 (95%) Frame = -1 / -3 Query: 578 WLIKAAERETSSMSLPSRTISSLTFSDRRIVTPSSMSTFLT 456 WL++AAERETSSMSLPSRT SS TFSDR++VTPSSMSTFLT Sbjct: 713 WLMRAAERETSSMSLPSRTSSSFTFSDRKMVTPSSMSTFLT 591 Score = 61.6 bits (128), Expect(3) = 2e-79 Identities = 25/29 (86%), Positives = 27/29 (93%) Frame = -1 / -1 Query: 659 SSLMAPLSLT*IPSKNFLMSLFFTWHFWL 573 SS+M PLSLT*IPSKNFL+SLFFTWHF L Sbjct: 1528 SSVMVPLSLT*IPSKNFLISLFFTWHFCL 1442 Score = 75.8 bits (159), Expect(4) = 2e-25 Identities = 30/40 (75%), Positives = 35/40 (87%) Frame = +3 / +3 Query: 345 QGLPLQDALRLRPLPHQRIHHRSQPRHRDQELPRRKKGKE 464 QGLPLQDALRLR LPHQR+HH+ Q RHRDQEL R++GK+ Sbjct: 366 QGLPLQDALRLRSLPHQRLHHQLQHRHRDQELLGREEGKK 485 Score = 42.8 bits (87), Expect(4) = 2e-25 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = +3 / +2 Query: 579 EMPREEQGHQEVFGWYL 629 EMPREEQG+QEV GWYL Sbjct: 1448 EMPREEQGYQEVLGWYL 1498 Score = 34.1 bits (68), Expect(4) = 2e-25 Identities = 21/41 (51%), Positives = 23/41 (56%) Frame = +3 / +3 Query: 456 GKESRHA*RCDDPAV*EGQG*DCP*WQRH*ARLSLCCLDQP 578 G+E HA D AV EG+G P QRH ARLSL QP Sbjct: 591 GEEG*HARGGDHLAVGEGEGRARPRRQRHRARLSLSSPHQP 713 Score = 29.0 bits (57), Expect(4) = 2e-25 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 / +1 Query: 617 WMVSTLATRAPSRKSR 664 WMVST ATR PS++ R Sbjct: 1486 WMVST*ATRVPSQRMR 1533 Score = 66.6 bits (139), Expect(2) = 5e-19 Identities = 26/45 (57%), Positives = 36/45 (80%) Frame = -3 / -2 Query: 588 VAFLVDQGSRARDELNVVAIKDNLILDLLRPQDRHTVKHVDFPYL 454 + LVD+G ARDEL+VVA++D L+L LLRPQD H ++HV+ P+L Sbjct: 723 IIHLVDEGC*ARDELDVVAVEDELVLHLLRPQDGHPLEHVNLPHL 589 Score = 52.8 bits (109), Expect(2) = 5e-19 Identities = 21/28 (75%), Positives = 25/28 (89%) Frame = -3 / -3 Query: 660 LFLDGALVANVDTIQKLPDVLVLHVAFL 577 + DG LVA+VDTIQ+LPD+LVLHVAFL Sbjct: 1529 ILCDGTLVAHVDTIQELPDILVLHVAFL 1446 Score = 37.7 bits (76), Expect = 0.14 Identities = 14/18 (77%), Positives = 15/18 (83%) Frame = -2 / -2 Query: 652 *WRPCR*RRYHPKTS*CP 599 *W PCR RRYHP+TS* P Sbjct: 1521 *WYPCRSRRYHPRTS*YP 1468
>LOC_Os02g01332:12002.t05514:unspliced-genomic 60S ribosomal protein L9, putative, expressed| Length = 3122 Score = 158 bits (340), Expect(4) = 6e-90 Identities = 66/74 (89%), Positives = 70/74 (94%) Frame = +1 / +1 Query: 238 DGGRKLKVDAWFGTRRTMAAIRTAISHVQNLITGVTKGFRYKMRFVYAHFPINASITAAN 417 +G RKL+VDAWFGTRRTMAAIRTAISHVQNLITGVTKG+RYKMRFVYAHFPINASIT +N Sbjct: 238 EGVRKLQVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSN 417 Query: 418 RGIEIRNFLGEKKV 459 IEIRNFLGEKKV Sbjct: 418 TAIEIRNFLGEKKV 459 Score = 89.5 bits (189), Expect(4) = 6e-90 Identities = 37/48 (77%), Positives = 43/48 (89%) Frame = +1 / +1 Query: 91 KMKTILASETMDIPEEVTVKVSAKMISVTGPRGTLTRNFKHLNLDFQL 234 +MKTILASETM+IP VTV V+AK+++V GPRG LTRNFKHLNLDFQL Sbjct: 85 EMKTILASETMEIPSGVTVHVAAKVVTVEGPRGKLTRNFKHLNLDFQL 228 Score = 89.0 bits (188), Expect(4) = 6e-90 Identities = 39/41 (95%), Positives = 41/41 (100%) Frame = +1 / +3 Query: 457 VRKVDMLDGVTILRSEKVKDEIVLDGNDIELVSRSAALINQ 579 VRKVDML+GVTILRSEKVKDE+VLDGNDIELVSRSAALINQ Sbjct: 927 VRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQ 1049 Score = 64.8 bits (135), Expect(4) = 6e-90 Identities = 25/28 (89%), Positives = 26/28 (92%) Frame = +1 / +2 Query: 577 QKCHVKNKDIRKFLDGIYVSDKGAIKEE 660 QKCHVKNKDIRKFLDGIYVSDKG I E+ Sbjct: 2753 QKCHVKNKDIRKFLDGIYVSDKGTITED 2836 Score = 120 bits (256), Expect(3) = 7e-55 Identities = 58/90 (64%), Positives = 62/90 (68%) Frame = -1 / -1 Query: 458 TFFSPRKFLISMPRLAAVMDALMGKWA*TKRIL*RKPLVTPVMRFWTWEXXXXXXXXXXX 279 TFFSPRKFLISM L VM+ALMGKWA*TKRIL*R PLVTPVMRFWTWE Sbjct: 458 TFFSPRKFLISMAVLELVMEALMGKWA*TKRIL*R*PLVTPVMRFWTWEMAVRMAAMVRR 279 Query: 278 VPNQASTLSFRPPSCSWKSRLRCLKLRVRV 189 VPN AST SF PS S + R L++RV Sbjct: 278 VPNHASTCSFLTPSTSSSWKSRFRCLKLRV 189 Score = 86.3 bits (182), Expect(3) = 7e-55 Identities = 36/43 (83%), Positives = 41/43 (95%) Frame = -1 / -2 Query: 578 WLIKAAERETSSMSLPSRTISSLTFSDRRIVTPSSMSTFLTFF 450 WLI AAERETSS+SLPSRT SSLTFS+R+IVTPSSMSTFLT++ Sbjct: 1048 WLISAAERETSSISLPSRTSSSLTFSERKIVTPSSMSTFLTYY 920 Score = 56.1 bits (116), Expect(3) = 7e-55 Identities = 21/28 (75%), Positives = 26/28 (92%) Frame = -1 / -3 Query: 662 YSSLMAPLSLT*IPSKNFLMSLFFTWHF 579 +SS+M PLSLT*+PS+NFL+SLF TWHF Sbjct: 2838 WSSVMVPLSLT*MPSRNFLISLFLTWHF 2755 Score = 77.6 bits (163), Expect(3) = 3e-34 Identities = 34/49 (69%), Positives = 37/49 (75%) Frame = -1 / -1 Query: 239 SCSWKSRLRCLKLRVRVPRGPVTEIIFADTFTVTSSGMSIVSDARIVFI 93 S SWKSR RCLKLRV PRGP T FA T TVT G+SIVS+A+IVFI Sbjct: 233 SSSWKSRFRCLKLRVSFPRGPSTVTTFAATCTVTPDGISIVSEAKIVFI 87 Score = 68.0 bits (142), Expect(3) = 3e-34 Identities = 28/46 (60%), Positives = 35/46 (76%) Frame = -3 / -1 Query: 579 LVDQGSRARDELNVVAIKDNLILDLLRPQDRHTVKHVDFPYLFFSE 442 LVDQ R D+L+++AIKD LILDLLR Q+ HT+KHV FP+L E Sbjct: 1049 LVDQCRRTGDKLDIIAIKDQLILDLLRTQNCHTLKHVHFPHLLLKE 912 Score = 47.3 bits (97), Expect(3) = 3e-34 Identities = 19/30 (63%), Positives = 25/30 (83%) Frame = -3 / -2 Query: 663 LLFLDGALVANVDTIQKLPDVLVLHVAFLV 574 L+ DGALV ++D IQ+LPD+LVL VAFL+ Sbjct: 2839 LVLSDGALVTDIDAIQELPDILVLDVAFLL 2750 Score = 79.0 bits (166), Expect(4) = 6e-28 Identities = 30/38 (78%), Positives = 34/38 (89%) Frame = +3 / +3 Query: 345 QGLPLQDALRLRPLPHQRIHHRSQPRHRDQELPRRKKG 458 QGLPLQDALRL P PHQR+HH+ Q RHRDQELPRR++G Sbjct: 345 QGLPLQDALRLCPFPHQRLHHQLQHRHRDQELPRREEG 458 Score = 50.6 bits (104), Expect(4) = 6e-28 Identities = 25/41 (60%), Positives = 28/41 (68%) Frame = +3 / +2 Query: 456 GKESRHA*RCDDPAV*EGQG*DCP*WQRH*ARLSLCCLDQP 578 G+ES HA* CD+ A *EGQG* P*WQ + A L C DQP Sbjct: 926 GEESGHA*GCDNFAF*EGQG*AGP*WQ*YRACLPFCGTDQP 1048 Score = 38.6 bits (78), Expect(4) = 6e-28 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = +3 / +1 Query: 552 LSLCCLDQPEMPREEQGHQEVFGWYL 629 +S+ L EMPR+EQG+QEV GW+L Sbjct: 2728 MSISFLLPTEMPRQEQGYQEVPGWHL 2805 Score = 23.5 bits (45), Expect(4) = 6e-28 Identities = 9/21 (42%), Positives = 12/21 (57%) Frame = +2 / +3 Query: 617 WMVSTLATRAPSRKSRGATYL 679 WM S TRAPS ++ +L Sbjct: 2793 WMASMSVTRAPSLRTSELRFL 2855 Score = 44.1 bits (90), Expect(2) = 3e-05 Identities = 18/26 (69%), Positives = 19/26 (73%) Frame = -2 / -3 Query: 532 HQGQSHP*PSQTAGSSHRQACRLSLP 455 HQG +HP*PSQ A SH QAC LS P Sbjct: 1002 HQGPAHP*PSQNAKLSHPQACPLSSP 925 Score = 29.0 bits (57), Expect(2) = 3e-05 Identities = 12/18 (66%), Positives = 12/18 (66%) Frame = -2 / -1 Query: 652 *WRPCR*RRYHPKTS*CP 599 *W PC * R HP TS* P Sbjct: 2828 *WCPCH*HRCHPGTS*YP 2775
>LOC_Os09g31170:12009.t02759:unspliced-genomic expressed protein| Length = 3480 Score = 56.1 bits (116), Expect = 4e-07 Identities = 22/25 (88%), Positives = 23/25 (92%) Frame = +1 / -3 Query: 586 HVKNKDIRKFLDGIYVSDKGAIKEE 660 HVKNKDIRKFLDGIYVSDKG I E+ Sbjct: 3478 HVKNKDIRKFLDGIYVSDKGTITED 3404 Score = 54.2 bits (112), Expect = 2e-06 Identities = 22/25 (88%), Positives = 24/25 (96%) Frame = -1 / +3 Query: 659 SSLMAPLSLT*IPSKNFLMSLFFTW 585 SS+M PLSLT*IPSKNFL+SLFFTW Sbjct: 3405 SSVMVPLSLT*IPSKNFLISLFFTW 3479 Score = 38.2 bits (77), Expect(2) = 5e-05 Identities = 13/15 (86%), Positives = 14/15 (93%) Frame = +3 / -2 Query: 585 PREEQGHQEVFGWYL 629 PREEQG+QEV GWYL Sbjct: 3479 PREEQGYQEVLGWYL 3435 Score = 29.0 bits (57), Expect(2) = 5e-05 Identities = 11/16 (68%), Positives = 13/16 (81%) Frame = +2 / -1 Query: 617 WMVSTLATRAPSRKSR 664 WMVST ATR PS++ R Sbjct: 3447 WMVST*ATRVPSQRMR 3400 Score = 46.4 bits (95), Expect = 3e-04 Identities = 18/25 (72%), Positives = 22/25 (88%) Frame = -3 / +2 Query: 660 LFLDGALVANVDTIQKLPDVLVLHV 586 + DG LVA+VDTIQ+LPD+LVLHV Sbjct: 3404 ILCDGTLVAHVDTIQELPDILVLHV 3478 Score = 37.7 bits (76), Expect = 0.14 Identities = 14/18 (77%), Positives = 15/18 (83%) Frame = -2 / +1 Query: 652 *WRPCR*RRYHPKTS*CP 599 *W PCR RRYHP+TS* P Sbjct: 3412 *WYPCRSRRYHPRTS*YP 3465
>LOC_Os12g40774:12012.t004151:unspliced-genomic expressed protein| Length = 1072 Score = 35.9 bits (72), Expect = 0.52 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = -2 / -2 Query: 811 PPSPVPGHP*SISSTNCSQPM*LPQKNTHPPLGQFLLPA 695 PP P P P S SS + + + LP + PP+GQ PA Sbjct: 132 PPPPAPPPPCSSSSASTERKLPLPTPPSSPPVGQCRRPA 16
>LOC_Os04g38560:12004.t03426:unspliced-genomic pectinesterase-1 precursor, putative, expressed| Length = 2031 Score = 35.9 bits (72), Expect = 0.52 Identities = 15/28 (53%), Positives = 17/28 (60%) Frame = +3 / +1 Query: 390 HQRIHHRSQPRHRDQELPRRKKGKESRH 473 H R ++QPRHR QEL RR E RH Sbjct: 940 HVRRRAQAQPRHRPQELRRRHHHHEDRH 1023
>LOC_Os11g42880:12011.t03818:unspliced-genomic expressed protein| Length = 4200 Score = 35.4 bits (71), Expect = 0.71 Identities = 17/34 (50%), Positives = 21/34 (61%) Frame = -1 / -1 Query: 548 SSMSLPSRTISSLTFSDRRIVTPSSMSTFLTFFS 447 SS+ S IS+L F +V PSS+ T LTFFS Sbjct: 633 SSLESESFIISALNFGMSAVVVPSSLLTSLTFFS 532
>LOC_Os09g20510:12009.t01785:unspliced-genomic major Facilitator Superfamily protein, expressed| Length = 2542 Score = 35.4 bits (71), Expect = 0.71 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = +3 / +2 Query: 366 ALRLRPLPHQRIHHRSQPRHRDQELPRRKKGKESR 470 A R++P +R+HHR + RH + PRR+ G +R Sbjct: 1598 ARRVQPRRDRRVHHRVRRRHVARRPPRRQDGGRAR 1702
>LOC_Os01g39290:12001.t03460:unspliced-genomic harpin-induced protein, putative, expressed| Length = 1129 Score = 35.4 bits (71), Expect = 0.71 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = +3 / +2 Query: 369 LRLRPLPHQRIHHRSQPRHRDQELPRRKKGKESR 470 LR R LPH+ HR QP+ +D+ RR +G+ R Sbjct: 488 LRRRHLPHRVHRHRPQPQRQDRLRVRRHRGRVRR 589
>LOC_Os04g52810:12004.t04755:unspliced-genomic no apical meristem protein, expressed| Length = 3730 Score = 29.9 bits (59), Expect(2) = 0.87 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +3 / +3 Query: 405 HRSQPRHRDQELPRRKKGKESRHA*RCDDPA 497 HR PRHR RR++G+ R R ++ A Sbjct: 1026 HRQGPRHRHPPPRRRRRGRRRRRGGRDEEDA 1118 Score = 27.6 bits (54), Expect(2) = 0.87 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 / +3 Query: 345 QGLPLQDALRLRPLPHQRIHHRSQPR 422 +GLPL ALR R + +R H R +P+ Sbjct: 57 RGLPLPQALRRRRVLRRRGHGRRRPQ 134
>LOC_Os06g13000:12006.t01176:unspliced-genomic ankyrin repeat protein, chloroplast precursor, putative, expressed| Length = 1907 Score = 35.0 bits (70), Expect = 0.97 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +3 / -2 Query: 366 ALRLRPLPHQRIHHRSQPRHRDQELPRRKKGKESRHA 476 A R RPLPH RS+ R R R++GK +R A Sbjct: 208 AARPRPLPHPHPRRRSRSRRRPAPPRTRRRGKGARRA 98
>LOC_Os05g43860:12005.t03875:unspliced-genomic expressed protein| Length = 2865 Score = 34.5 bits (69), Expect = 1.3 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = +3 / +1 Query: 348 GLPLQDALRLRPLPHQRIHHRSQPRHRDQELPRRKKGKESRH 473 G L+ ALR LPH+ + R +P+ R + R++ + RH Sbjct: 1186 GAVLRRALRGGQLPHRELQQRQRPQRRRRPASARRRRRRRRH 1311
>LOC_Os05g02490:12005.t00148:unspliced-genomic adenosine 3-phospho 5-phosphosulfate transporter 1, putative,| expressed Length = 6315 Score = 34.5 bits (69), Expect = 1.3 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +3 / -2 Query: 354 PLQDALRLRPLPHQRIHHRSQPRHRDQELPRRKK 455 P Q A L LP +R HR +PRHR + RR++ Sbjct: 272 PHQSAPVLLVLPRRRRRHRQRPRHRRRRRRRRRR 171
>LOC_Os03g55240:12003.t04788:unspliced-genomic cytochrome P450 81E1, putative, expressed| Length = 5372 Score = 34.5 bits (69), Expect = 1.3 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +3 / +1 Query: 366 ALRLRPLPHQRIHHRSQPRHRDQELPRRKKGKESRHA*RCDDPAV 500 ALR PH H R PRH +++PRR + R A + AV Sbjct: 3166 ALRAPRRPHVGAHRRRGPRHGAEDVPRRGRVPRRRRAHPAEAEAV 3300
>LOC_Os03g21310:12003.t01886:unspliced-genomic ulp1 protease family, C-terminal catalytic domain containing| protein, expressed Length = 8572 Score = 34.5 bits (69), Expect = 1.3 Identities = 16/54 (29%), Positives = 27/54 (50%) Frame = -1 / -1 Query: 779 YLQYKLQPTHVIAPKKHPPSSRTVSVTSYKGLAADRSHPYSSLMAPLSLT*IPS 618 Y K +H+ PKK+PP+ V+ + G + RS + L+ P+ +PS Sbjct: 361 YSPTKTCDSHIAFPKKNPPNHNAVAEMTMTGTMSSRSIYHRELLGPILP*SVPS 200
>LOC_Os11g16450:12011.t01425:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2720 Score = 34.1 bits (68), Expect = 1.8 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +3 / -3 Query: 387 PHQRIHHRSQPRHRDQELPRRKKGKESRH 473 PH+R+H R PR RD L R + G H Sbjct: 492 PHRRLHRRQPPRVRDHRLLRERGGGGRPH 406
>LOC_Os11g05970:12011.t00488:unspliced-genomic disulfide oxidoreductase/ electron carrier/ oxidoreductase,| putative, expressed Length = 1482 Score = 34.1 bits (68), Expect = 1.8 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 / +3 Query: 366 ALRLRPLPHQRIHHRSQPRHRDQELPRRKK 455 A+R RP H+R HR +P +D PRR++ Sbjct: 6 AVRRRPRGHRRRRHRRRPPRQDAPEPRRRR 95
>LOC_Os11g19210:12011.t01690:unspliced-genomic beta-D-xylosidase, putative, expressed| Length = 6013 Score = 33.6 bits (67), Expect = 2.5 Identities = 24/79 (30%), Positives = 34/79 (43%) Frame = -1 / +1 Query: 713 TVSVTSYKGLAADRSHPYSSLMAPLSLT*IPSKNFLMSLFFTWHFWLIKAAERETSSMSL 534 T +V GL S SSL+ + + S LM L F + WL+ A ++ Sbjct: 3439 TKTVRGDWGLDGYVSQVMSSLLFDSVMNLVMSSRVLMRLGFWFWGWLLAAGTSPRTATRS 3618 Query: 533 PSRTISSLTFSDRRIVTPS 477 PS + S T RR +PS Sbjct: 3619 PSCVMRSATHRRRRTPSPS 3675
>LOC_Os10g41360:12010.t03372:unspliced-genomic ubiquitin-protein ligase, putative, expressed| Length = 7632 Score = 33.6 bits (67), Expect = 2.5 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -1 / -2 Query: 731 HPPSSRTVSVTSYKGLAADRSHPYSSLMAPLSL 633 HPP S + + +Y AA RSHP+ + PLS+ Sbjct: 215 HPPESSSPNSAAYLRPAAARSHPFLAGWTPLSV 117
>LOC_Os07g43980:12007.t04040:unspliced-genomic ATP-dependent RNA helicase DDX49, putative, expressed| Length = 4007 Score = 33.6 bits (67), Expect = 2.5 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 / -2 Query: 387 PHQRIHHRSQPRHRDQELPRRKKGKESR 470 P QR HHR + R R + PRR +G +R Sbjct: 223 PRQRQHHRRRARSRRRRGPRRSRGGRAR 140
>LOC_Os07g33660:12007.t03044:unspliced-genomic expressed protein| Length = 1693 Score = 33.6 bits (67), Expect = 2.5 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +3 / -3 Query: 357 LQDALRLRPLPHQRIHHRSQPRHRDQELPRRKKGKESR 470 L++A R P R HHR+QPR PRR+ + R Sbjct: 263 LEEARRPHPPALARRHHRAQPRRPQPPQPRRRPRRPPR 150
>LOC_Os03g17084:12003.t01489:unspliced-genomic core histone H2A/H2B/H3/H4 family protein| Length = 4605 Score = 33.6 bits (67), Expect = 2.5 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +3 / -3 Query: 396 RIHHRSQPRHRDQELPRRKKGKESR 470 R HR PRHR ++ P R++G++ R Sbjct: 3553 RRRHRQSPRHRRRQSPAREEGRQKR 3479
>LOC_Os02g02190:12002.t00119:unspliced-genomic high affinity nitrate transporter, putative, expressed| Length = 1860 Score = 33.6 bits (67), Expect = 2.5 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 / +1 Query: 375 LRPLPHQRIHHRSQPRHRDQELPRRKKGKESR 470 LR +P HH Q HR ++ PRR+ GK R Sbjct: 595 LRVMPVLDEHHVQQQDHRPRQRPRRRVGKHGR 690
>LOC_Os02g02170:12002.t00117:unspliced-genomic high affinity nitrate transporter, putative, expressed| Length = 1922 Score = 33.6 bits (67), Expect = 2.5 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +3 / +3 Query: 375 LRPLPHQRIHHRSQPRHRDQELPRRKKGKESR 470 LR +P HH Q HR ++ PRR+ GK R Sbjct: 600 LRVMPVLDEHHVQQQDHRPRQRPRRRVGKHGR 695
>LOC_Os01g43890:12001.t03902:unspliced-genomic SCPL50, putative, expressed| Length = 1571 Score = 33.6 bits (67), Expect = 2.5 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +3 / +1 Query: 351 LPLQDALRLRPLPHQRIHHRSQPRHRDQELPRRK 452 LP + R RPLP R+H R +P+ + E P R+ Sbjct: 304 LPHRQLRRARPLPPPRLHLRPRPQRQPVEPPLRR 405
>LOC_Os10g28050:12010.t02160:unspliced-genomic chitinase 2, putative, expressed| Length = 1373 Score = 33.1 bits (66), Expect = 3.5 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = +3 / +1 Query: 360 QDALRLRPLPHQRIHHRSQPRHRDQELPRRKKGKESRH 473 + +RL P H R+HHR +P DQ + + H Sbjct: 205 ESPVRLHPRLHHRLHHRDEPADPDQRQVQHLLAEHGAH 318
>LOC_Os07g42690:12007.t03919:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3622 Score = 33.1 bits (66), Expect = 3.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +3 / -1 Query: 378 RPLPHQRIHHRSQPRHRDQELPRRKKGKESRH 473 RP P R R +PRHR Q+ P+ + +RH Sbjct: 1783 RPQPRARDRPRLRPRHRAQDRPQPRPRPRARH 1688
>LOC_Os05g27010:12005.t02355:unspliced-genomic peptide transporter PTR2, putative, expressed| Length = 1696 Score = 33.1 bits (66), Expect = 3.5 Identities = 15/35 (42%), Positives = 17/35 (48%) Frame = +3 / +3 Query: 354 PLQDALRLRPLPHQRIHHRSQPRHRDQELPRRKKG 458 PL LR R P + HR PRH PRR+ G Sbjct: 819 PLHPGLRPRARPPRPPPHRRTPRHHAPAAPRRRVG 923
>LOC_Os09g28840:12009.t02562:unspliced-genomic serine carboxypeptidase family protein, expressed| Length = 4851 Score = 32.7 bits (65), Expect = 4.8 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -1 / +2 Query: 758 PTHVIAPKKHPPSSRTVS 705 P H+I P HPPS+R +S Sbjct: 1415 PNHIIRPNHHPPSTRRIS 1468
>LOC_Os07g12590:12007.t01130:unspliced-genomic F-box domain containing protein, expressed| Length = 2978 Score = 32.7 bits (65), Expect = 4.8 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +3 / +1 Query: 372 RLRPLPHQRIHHRSQPRHRDQELPRRKKGKESRHA*RCDDPAV*EGQG 515 R PL ++ ++ PRHRD+E + G R R P + EG G Sbjct: 334 RRPPLGRAQLSRQAPPRHRDEEEEKSGGGGGGRDWGRVSHPLLPEGHG 477
>LOC_Os01g66544:12001.t06015:unspliced-genomic hypothetical protein| Length = 3265 Score = 32.7 bits (65), Expect = 4.8 Identities = 13/38 (34%), Positives = 18/38 (47%) Frame = +3 / -1 Query: 372 RLRPLPHQRIHHRSQPRHRDQELPRRKKGKESRHA*RC 485 R RP P + P HR +L RR++ + RH C Sbjct: 2935 RRRPFPRASSSSSAVPDHRHHQLRRRRRRSKRRHCLHC 2822
>LOC_Os12g38810:12012.t03561:unspliced-genomic expressed protein| Length = 1490 Score = 32.2 bits (64), Expect = 6.5 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +3 / -3 Query: 390 HQRIHHRSQPRHRDQELPRRKKGKESRHA 476 H+R HH +PRHR + RR S HA Sbjct: 267 HRRPHHPPRPRHRRRRRRRRAMEASSPHA 181
>LOC_Os06g11850:12006.t01062:unspliced-genomic hypothetical protein| Length = 3429 Score = 32.2 bits (64), Expect = 6.5 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -1 / +1 Query: 830 NIHLQGTPFSSSRTSLIYLQYKLQPTHVI 744 N ++ PFSSS SLIYL ++L H++ Sbjct: 1030 NAFVRSKPFSSSEISLIYLLFRLIINHLL 1116
>LOC_Os04g38810:12004.t03451:unspliced-genomic actin binding protein, putative, expressed| Length = 3122 Score = 32.2 bits (64), Expect = 6.5 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +3 / -1 Query: 345 QGLPLQDALRLRPLPHQRIHHRSQPRHRDQ 434 +GLP+Q L R R HH QP RD+ Sbjct: 2144 EGLPVQHRLHSRERARYREHHLEQPLRRDE 2055
>LOC_Os02g56700:12002.t05242:unspliced-genomic dihydroflavonol-4-reductase, putative, expressed| Length = 2475 Score = 32.2 bits (64), Expect = 6.5 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +3 / +1 Query: 378 RPLPHQRIHHRSQPRHRDQELPRRK 452 RPLPH+R H Q R R + PRR+ Sbjct: 1138 RPLPHRRRGHLPQRRRRLRRRPRRR 1212
>LOC_Os01g65410:12001.t05906:unspliced-genomic serine hydroxymethyltransferase, mitochondrial precursor, putative,| expressed Length = 4267 Score = 32.2 bits (64), Expect = 6.5 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = +3 / -1 Query: 381 PLPHQRIHHRSQPRHRDQELPRRKKGKES 467 PLP Q+ HR Q +HR Q+ RR E+ Sbjct: 247 PLPPQQQQHRRQQQHRRQQQRRRSTSAEA 161
>LOC_Os01g33160:12001.t02887:unspliced-genomic pop3 peptide, putative, expressed| Length = 7633 Score = 32.2 bits (64), Expect = 6.5 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = -3 / -3 Query: 885 CLRKQNIAADNKTSYQPVKYTSSRNPLLQFQDIPDLSPVQIAANPCDCPKKTPTLL 718 CL + N ++QP S + L D PD+ P ++ +P + TP LL Sbjct: 3020 CLSSM*LDIANYHAHQPPPLASPTDMSLATLDFPDVVPSAMSVSPASGDRATPLLL 2853
>LOC_Os01g07930:12001.t00671:unspliced-genomic zinc finger C-x8-C-x5-C-x3-H type family protein, expressed| Length = 1355 Score = 32.2 bits (64), Expect = 6.5 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 / -3 Query: 369 LRLRPLPHQRIHHRSQPRHRD 431 LR+ P PH +HH + PRH D Sbjct: 123 LRIPPPPHLPLHHPTPPRHLD 61
>LOC_Os07g49030:12007.t04531:unspliced-genomic PHD-finger family protein, expressed| Length = 4272 Score = 25.4 bits (49), Expect(2) = 7.9 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +3 / +1 Query: 858 LPLCFVCVGMPKGEEQV 908 +P CF CVGM G +V Sbjct: 433 IPACFSCVGMGTGGGRV 483 Score = 23.5 bits (45), Expect(2) = 7.9 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +3 / +2 Query: 726 WVFFWGNHMGWLQFVLEI 779 +VFFWG G L + + I Sbjct: 341 FVFFWGKQFGQLAWRISI 394
>LOC_Os10g37540:12010.t03014:unspliced-genomic expressed protein| Length = 1667 Score = 31.8 bits (63), Expect = 9.0 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +3 / +3 Query: 360 QDALRLRPLPHQRIHHRSQPRHRDQELPRRKK 455 +D+ R R R+ HR QPR RD E RR++ Sbjct: 789 RDSPRRRRRRRGRLRHRPQPRPRDLEQRRRRR 884
>LOC_Os08g40160:12008.t03747:unspliced-genomic thylakoid lumen protein, chloroplast precursor, putative, expressed| Length = 2687 Score = 31.8 bits (63), Expect = 9.0 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +3 / +1 Query: 381 PLPHQRIHHRSQPRHRDQELPRRKK 455 PL QR HHR++PR ++ RR++ Sbjct: 1249 PLISQRSHHRNRPRFHQPQVVRRRR 1323
>LOC_Os08g33370:12008.t03078:unspliced-genomic 14-3-3-like protein, putative, expressed| Length = 3130 Score = 31.8 bits (63), Expect = 9.0 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +3 / -1 Query: 372 RLRPLPHQRIHHRSQPRHRDQELPRRKKGKESRHA*RCD 488 R P PH + + ++R ++ RR +E HA*+C+ Sbjct: 235 RSSPKPHPTVQNPPPQKNRQKKKHRRTPSREIEHA*KCN 119
>LOC_Os08g01550:12008.t00054:unspliced-genomic hypothetical protein| Length = 669 Score = 31.8 bits (63), Expect = 9.0 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +3 / -1 Query: 387 PHQRIHHRSQPRHRDQELPRRKKGKESR 470 P QR HHR QPR PRR + + R Sbjct: 579 PLQRPHHRHQPRRPPPRAPRRPQPQHRR 496
>LOC_Os07g11060:12007.t00980:unspliced-genomic expressed protein| Length = 7514 Score = 31.8 bits (63), Expect = 9.0 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 / -2 Query: 390 HQRIHHRSQPRHRDQELPRRKK 455 H +H S PRHR E PRR++ Sbjct: 286 HLHLHRPSHPRHRRGERPRRRR 221
>LOC_Os05g07210:12005.t00609:unspliced-genomic ZIP zinc/iron transport family protein, expressed| Length = 2833 Score = 31.8 bits (63), Expect = 9.0 Identities = 13/41 (31%), Positives = 20/41 (48%) Frame = +3 / +1 Query: 348 GLPLQDALRLRPLPHQRIHHRSQPRHRDQELPRRKKGKESR 470 G+P + +R RP P Q + R P H + P R+ + R Sbjct: 262 GVPREGRVRARPPPRQVLRRRGHPLHLARPRPPRRARRARR 384
>LOC_Os04g51250:12004.t04602:unspliced-genomic expressed protein| Length = 2911 Score = 31.8 bits (63), Expect = 9.0 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = -1 / -2 Query: 227 KSRLRCLKLRVRVPRGPVTEIIFADTFTVTSSGMSIVSDAR 105 K LRC+ LR+ P GPV+ ++ +D +T +++ + R Sbjct: 1488 KKSLRCVGLRIGGPSGPVSTLLVSD*QKLTHQFTAVMMNRR 1366
>LOC_Os01g69830:12001.t06286:unspliced-genomic teosinte glume architecture 1, putative, expressed| Length = 3986 Score = 31.8 bits (63), Expect = 9.0 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = +3 / -1 Query: 381 PLPHQRIHHRSQPRHRDQELPRRKKGKESR 470 PL R H R P R + LPRR++G+ R Sbjct: 518 PLHRARRHRRLLPLPRPRPLPRRRRGRRRR 429
>LOC_Os01g51230:12001.t04557:unspliced-genomic calmodulin binding protein, putative, expressed| Length = 2465 Score = 31.8 bits (63), Expect = 9.0 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = +3 / -1 Query: 354 PLQDALRLRPLPHQRIHHRSQPRHRDQELPRRKK 455 PL LR RP PHQR + HR+ PRR + Sbjct: 197 PLLLPLRRRPQPHQRPDPLPRRPHREPTRPRRAR 96
>LOC_Os01g49130:12001.t04354:unspliced-genomic glycine-rich protein 2, putative| Length = 489 Score = 31.8 bits (63), Expect = 9.0 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = +3 / -3 Query: 354 PLQDALRLRPLPHQRIHHRSQPRHRDQELPRRKKGKESR 470 P + +R R PH+RIH R P H + RR + R Sbjct: 364 PPRRRIRRRSPPHRRIHRRRPPHHWIRRRRRRAPRRRGR 248
>LOC_Os01g09640:12001.t00841:unspliced-genomic MCB2 protein, putative, expressed| Length = 2372 Score = 31.8 bits (63), Expect = 9.0 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +3 / -3 Query: 345 QGLPLQDALRLRPLPHQRIHHRSQPRHRDQELPRRKKGKESRH 473 QG+P Q A RL + +H S+P Q + KK + RH Sbjct: 1593 QGIPFQQAQRLSRVSVSDVHSHSEPFLHPQSERKEKKHQIFRH 1465
>LOC_Os04g20960:12004.t005550:unspliced-genomic expressed protein| Length = 33278 Score = 28.6 bits (56), Expect(2) = 9.8 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -2 / +2 Query: 817 KEPPSPVPGHP*SISSTNCSQPM*LPQKNT 728 + PP+P P HP + +ST S PQ T Sbjct: 23180 ESPPTPTPTHPRATTSTTTSSSSTPPQPVT 23269 Score = 28.1 bits (55), Expect(2) = 9.8 Identities = 14/48 (29%), Positives = 24/48 (50%) Frame = -1 / +2 Query: 602 SLFFTWHFWLIKAAERETSSMSLPSRTISSLTFSDRRIVTPSSMSTFL 459 SLFF+ +W +++ + M L T S+ T + PS+ S F+ Sbjct: 27986 SLFFSEEYWQFCSSDTQEILMLLRCLTASASTGLASLVALPSAQSDFV 28129 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 334,373,203 Number of extensions: 5225767 Number of successful extensions: 25743 Number of sequences better than 10.0: 50 Length of query: 361 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 311 Effective length of database: 52,799,986 Effective search space: 16420795646 Effective search space used: 16420795646 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
