ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf52l23 |
|---|---|
| Clone Library Name | barley_pub |
>P48752:PIVA2_ADE40 Maturation protein - Human adenovirus 40 (HAdV-40)| Length = 446 Score = 37.7 bits (86), Expect = 0.067 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 7 QPPNPPRSRDPTSPLVARNLSQSNS-PAAASDHLPCFLCRPNHRSKEPRANQPP-PRSIL 180 +P P R S + R+ +Q N+ PA H PC RP + +P+ +QPP PRS+L Sbjct: 16 EPEENPGKRPTRSAPLYRHRNQPNANPATLERHYPCSTGRPPTGTVQPKPSQPPQPRSLL 75
>Q76KP1:B4GN4_HUMAN N-acetyl-beta-glucosaminyl-glycoprotein| 4-beta-N-acetylgalactosaminyltransferase 1 - Homo sapiens (Human) Length = 1039 Score = 37.0 bits (84), Expect = 0.11 Identities = 32/100 (32%), Positives = 43/100 (43%) Frame = +1 Query: 10 PPNPPRSRDPTSPLVARNLSQSNSPAAASDHLPCFLCRPNHRSKEPRANQPPPRSILCLC 189 PP PPR RD +P +R LS + A A+ LP FL R P QPPP+ + + Sbjct: 476 PPTPPRPRDGGTPRHSRALSWA---ARAARPLPLFLGRA--PPPRPAVEQPPPK--VYVT 528 Query: 190 LIEPLSRSSRSNQMLASCA*PHPQPPVSWTCPGTAAIFIH 309 + P R+S P P W P +F+H Sbjct: 529 RVRPGQRASPR----------APAPRAPW--PPFPGVFLH 556
>Q8R4S2:AHR_MUSSP Aryl hydrocarbon receptor precursor - Mus spretus (Western wild| mouse) Length = 854 Score = 35.0 bits (79), Expect = 0.44 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Frame = +1 Query: 94 SDHLPCFLCRPNHRSKEPRANQPPPRSI-----LCLCLIEPLSRSSRSNQMLASCA*PHP 258 + HL C L ++ + QPPP+++ LC + + Q+ + A +P Sbjct: 605 TQHLSCMLQERLQLEQQQQLQQPPPQALEPQQQLCQMVCPQQDLGPKHTQINGTFASWNP 664 Query: 259 QPPVSWTCP 285 PPVS+ CP Sbjct: 665 TPPVSFNCP 673
>Q8R4S4:AHR_MUSSI Aryl hydrocarbon receptor precursor - Mus spicilegus (Steppe mouse)| Length = 854 Score = 35.0 bits (79), Expect = 0.44 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Frame = +1 Query: 94 SDHLPCFLCRPNHRSKEPRANQPPPRSI-----LCLCLIEPLSRSSRSNQMLASCA*PHP 258 + HL C L ++ + QPPP+++ LC + + Q+ + A +P Sbjct: 605 TQHLSCMLQERLQLEQQQQLQQPPPQALEPQQQLCQMVCPQQDLGPKHTQINGTFASWNP 664 Query: 259 QPPVSWTCP 285 PPVS+ CP Sbjct: 665 TPPVSFNCP 673
>Q8R4S5:AHR_MUSMM Aryl hydrocarbon receptor precursor - Mus musculus molossinus| (Japanese house mouse) Length = 883 Score = 35.0 bits (79), Expect = 0.44 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Frame = +1 Query: 94 SDHLPCFLCRPNHRSKEPRANQPPPRSI-----LCLCLIEPLSRSSRSNQMLASCA*PHP 258 + HL C L ++ + QPPP+++ LC + + Q+ + A +P Sbjct: 599 TQHLSCMLQERLQLEQQQQLQQPPPQALEPQQQLCQMVCPQQDLGPKHTQINGTFASWNP 658 Query: 259 QPPVSWTCP 285 PPVS+ CP Sbjct: 659 TPPVSFNCP 667
>Q8R4S6:AHR_MUSMC Aryl hydrocarbon receptor precursor - Mus musculus castaneus| (Southeastern Asian house mouse) Length = 848 Score = 35.0 bits (79), Expect = 0.44 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Frame = +1 Query: 94 SDHLPCFLCRPNHRSKEPRANQPPPRSI-----LCLCLIEPLSRSSRSNQMLASCA*PHP 258 + HL C L ++ + QPPP+++ LC + + Q+ + A +P Sbjct: 599 TQHLSCMLQERLQLEQQQQLQQPPPQALEPQQQLCQMVCPQQDLGPKHTQINGTFASWNP 658 Query: 259 QPPVSWTCP 285 PPVS+ CP Sbjct: 659 TPPVSFNCP 667
>P30561:AHR_MOUSE Aryl hydrocarbon receptor precursor - Mus musculus (Mouse)| Length = 848 Score = 35.0 bits (79), Expect = 0.44 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Frame = +1 Query: 94 SDHLPCFLCRPNHRSKEPRANQPPPRSI-----LCLCLIEPLSRSSRSNQMLASCA*PHP 258 + HL C L ++ + QPPP+++ LC + + Q+ + A +P Sbjct: 599 TQHLSCMLQERLQLEQQQQLQQPPPQALEPQQQLCQMVCPQQDLGPKHTQINGTFASWNP 658 Query: 259 QPPVSWTCP 285 PPVS+ CP Sbjct: 659 TPPVSFNCP 667
>Q3MHZ4:TGFI1_BOVIN Transforming growth factor beta-1-induced transcript 1 protein -| Bos taurus (Bovine) Length = 456 Score = 34.7 bits (78), Expect = 0.57 Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 6/80 (7%) Frame = +1 Query: 7 QPPNPPRSRDPTSPLVARNLSQSNSPAAASDHLPCFLCRPNHRSKEPRANQPPPRSILC- 183 +PP P TSPL +S+ + DHL +C+P RS +P A PP S C Sbjct: 27 RPPEPL-----TSPLTQMGPGESSGASGDKDHLYSTVCKP--RSPKPAAPATPPFSSSCG 79 Query: 184 -----LCLIEPLSRSSRSNQ 228 LC ++ L + + Q Sbjct: 80 VLGTGLCELDRLLQELNATQ 99
>Q7RX84:CWC22_NEUCR Pre-mRNA-splicing factor cwc-22 - Neurospora crassa| Length = 1010 Score = 34.7 bits (78), Expect = 0.57 Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Frame = +1 Query: 7 QPPNPPRSRDPT--SPLVARNLSQSNSPAAASDHLPCFLCRPNHRSKEPRANQPPPR 171 QP + PRSR PT S +R +S SP S R RS PRA PPPR Sbjct: 76 QPHSHPRSRSPTPRSQSPSRRSVRSPSPRQGSP------ARRVDRSSSPRARSPPPR 126
>Q96JQ0:PCD16_HUMAN Protocadherin-16 precursor - Homo sapiens (Human)| Length = 3298 Score = 33.5 bits (75), Expect = 1.3 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = +1 Query: 160 PPPRSILCLCLIEPLSRSSRSNQMLASCA*PHPQPPVSWTCPGTAAI 300 P PR++ CL L+EPL S + L A QPP S P T + Sbjct: 2546 PGPRALGCLVLLEPLDFESLTQYNLTVAAADRGQPPQSSVVPVTVTV 2592
>Q6AXY7:PR38B_RAT Pre-mRNA-splicing factor 38B - Rattus norvegicus (Rat)| Length = 542 Score = 31.6 bits (70), Expect = 4.8 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = -3 Query: 564 KEKRHSKELLQRRHAGDLGELRLFHGREEHKLERERS*NRKEGATKERE*RGR 406 +EK+H ++ RRH D E + H R + + RS +R A K R + Sbjct: 399 EEKKHKEDKEDRRHRDDKKESKKKHSRSRSRERKHRSRSRSRNAGKRSRSRSK 451
>O88874:CCNK_MOUSE Cyclin-K - Mus musculus (Mouse)| Length = 554 Score = 31.6 bits (70), Expect = 4.8 Identities = 21/79 (26%), Positives = 34/79 (43%) Frame = +2 Query: 572 PHRPPQPHPKSMP*RLSRWPKVASAMNTTPSSSPLRLCLRNRAPSIGIHRCDHACEHPSV 751 PHRPP P P S +S S+ + L+ ++ PS G + P++ Sbjct: 419 PHRPPPPPPSSYMTGMS----TTSSYMSGEGYQSLQSMMKTEGPSYGA-LPPASFPPPTI 473 Query: 752 AATSPQHPLPPRKHNRGWP 808 +P +P PP +N +P Sbjct: 474 PPPTPGYPPPPPTYNPNFP 492
>Q8BRK8:AAPK2_MOUSE 5'-AMP-activated protein kinase catalytic subunit alpha-2 - Mus| musculus (Mouse) Length = 552 Score = 31.6 bits (70), Expect = 4.8 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +2 Query: 575 HRPP--QPHPKSMP*RLSRWPKVASAMNTTPSSSPLRLCLRNRAPSIGIHRCDHACE 739 H PP +PHP+ MP ++ PK ++ ++ P L ++ +GI AC+ Sbjct: 358 HIPPGLKPHPERMPPLIADSPKARCPLDALNTTKPKSLAVKKAKWHLGIRSQSKACD 414
>P10220:TEGU_HHV11 Large tegument protein - Human herpesvirus 1 (strain 17) (HHV-1)| (Human herpes simplex virus 1) Length = 3164 Score = 27.7 bits (60), Expect(2) = 5.9 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +1 Query: 13 PNPPRSRDPTSPLVARNLSQSNSPAAASDHLPCFLCRPNHRSKEPRANQPPP 168 P+P DPT+P++ RN ++ S + A P +P P + PPP Sbjct: 2817 PSPWDPADPTAPVLGRNPAEPTSSSPAGPSPPPPAVQP---VAPPPTSGPPP 2865 Score = 21.9 bits (45), Expect(2) = 5.9 Identities = 10/25 (40%), Positives = 13/25 (52%) Frame = +2 Query: 266 LSPGRVREPQPSSSMRPQEQEFLQP 340 L+ R+ PQP +PQ Q QP Sbjct: 2903 LTVSRLSAPQPQPQPQPQPQPQPQP 2927
>Q0DJC7:SAP15_ORYSJ Zinc finger AN1 domain-containing stress-associated protein 15 -| Oryza sativa subsp. japonica (Rice) Length = 174 Score = 31.2 bits (69), Expect = 6.3 Identities = 17/65 (26%), Positives = 29/65 (44%) Frame = +1 Query: 13 PNPPRSRDPTSPLVARNLSQSNSPAAASDHLPCFLCRPNHRSKEPRANQPPPRSILCLCL 192 P PP+S PT P A S + +P ++ + L + + K A +++ + Sbjct: 43 PPPPQSTPPTPPAAAAAASAAAAPQFSAKNCEGILIEVSKKRKLAEATATDANAVVVAAV 102 Query: 193 IEPLS 207 EPLS Sbjct: 103 AEPLS 107
>Q9WU62:INCE_MOUSE Inner centromere protein - Mus musculus (Mouse)| Length = 880 Score = 31.2 bits (69), Expect = 6.3 Identities = 22/53 (41%), Positives = 27/53 (50%) Frame = -2 Query: 565 KGEEAQ*RASPAEARGRLGRAPFVSWKRRTQTRKGEKLE*ERGSNERKRIERK 407 K EE Q R AEAR RL +R + R+ E+ E ER ERK ER+ Sbjct: 641 KKEEEQERRKAAEAR-RLAEQREQERRREQERREQERREQERREQERKEQERR 692
>Q63257:IL4RA_RAT Interleukin-4 receptor alpha chain precursor - Rattus norvegicus| (Rat) Length = 801 Score = 31.2 bits (69), Expect = 6.3 Identities = 36/128 (28%), Positives = 46/128 (35%), Gaps = 18/128 (14%) Frame = +2 Query: 545 LLCLFSFIQ-----------PHRPPQPHPKSMP*RLSRWPKVASAMNTTPSSSPLRLCLR 691 L C FS I+ P R P ++S W K + +T S + CL Sbjct: 249 LTCYFSIIKIKKIWWDQIPTPARSPLAAIIIQDTKVSLWEKQTRSQESTKSRH-WKTCLT 307 Query: 692 NRAPSIGIHRCDHACEHPSVAATSP-QHPLPPRKHNRGW------PGVLWFSQVHSSSVQ 850 P + HR E P A T P Q P GW VLW VH S V+ Sbjct: 308 KLLPCLLEHRVKKERESPKAAKTKPLQSP-----EKAGWYPAEVSRTVLWPENVHVSVVR 362 Query: 851 FAICLVIF 874 C+ +F Sbjct: 363 ---CMELF 367
>Q8TE59:ATS19_HUMAN ADAMTS-19 precursor - Homo sapiens (Human)| Length = 1207 Score = 31.2 bits (69), Expect = 6.3 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 4/76 (5%) Frame = +2 Query: 569 QPHRPPQPHPKSMP*RLSRWPKVASAMNTTPSSSPLRLCLRNR----APSIGIHRCDHAC 736 QP PPQP P P + + + S L L LR AP + + + Sbjct: 141 QPPPPPQPPPSPPPAQHAEPDGDEVLLRIPAFSRDLYLLLRRDGRFLAPRFAVEQRPNPG 200 Query: 737 EHPSVAATSPQHPLPP 784 P+ AA++PQ P PP Sbjct: 201 PGPTGAASAPQPPAPP 216
>P09482:ACHA4_CHICK Neuronal acetylcholine receptor subunit alpha-4 precursor - Gallus| gallus (Chicken) Length = 622 Score = 30.8 bits (68), Expect = 8.2 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 2/85 (2%) Frame = +1 Query: 19 PPRSRDPTSPLVARNLSQSNSPA--AASDHLPCFLCRPNHRSKEPRANQPPPRSILCLCL 192 P +D L+ +NSP + +D P F S P++N+P P S C L Sbjct: 356 PSTVKDNCKKLIESMHKLTNSPRLWSETDMEPNFT---TSSSPSPQSNEPSPTSSFCAHL 412 Query: 193 IEPLSRSSRSNQMLASCA*PHPQPP 267 EP +S S HP+PP Sbjct: 413 EEPAKPMCKSPSGQYSML--HPEPP 435 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 173,062,524 Number of extensions: 4029788 Number of successful extensions: 15683 Number of sequences better than 10.0: 19 Number of HSP's gapped: 15571 Number of HSP's successfully gapped: 20 Length of query: 312 Length of database: 100,686,439 Length adjustment: 113 Effective length of query: 199 Effective length of database: 69,691,104 Effective search space: 13868529696 Effective search space used: 13868529696 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
