ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf50d15 |
|---|---|
| Clone Library Name | barley_pub |
>Q7MZB5:UBIC_PHOLL Chorismate--pyruvate lyase - Photorhabdus luminescens subsp.| laumondii Length = 168 Score = 34.3 bits (77), Expect = 0.54 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%) Frame = +1 Query: 172 PLSWAGISQELTPDQKKDALIRLAIIQVRKEELYN--QISAWHEEYCLEERLGNKNVRLL 345 P+ W + + PD+ D L+ L + R E+ N +I + E + EE+L ++N RLL Sbjct: 11 PIQWLSVDSPVLPDEVLDWLMELGSMTRRFEQYCNSVRIIPFRECFITEEQLSDENERLL 70
>Q86YZ3:HORN_HUMAN Hornerin - Homo sapiens (Human)| Length = 2850 Score = 33.9 bits (76), Expect = 0.70 Identities = 25/65 (38%), Positives = 30/65 (46%) Frame = +3 Query: 69 SEFGTSSIGASYERSGHGHRASTSGEESGGGFWASAVLGRDFPGAHARSKEGCSDSLGHH 248 S G G+S+ SG GHR S SG+ SG G S+ G H S G S S G H Sbjct: 1505 SSRGPYESGSSHS-SGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHG-STSGQSSSCGQH 1562 Query: 249 PSQEG 263 + G Sbjct: 1563 GASSG 1567 Score = 33.5 bits (75), Expect = 0.91 Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Frame = +3 Query: 78 GTSSIGASYER-----SGHGHRASTSGEESGGGFWASAVLGRDFPGAHARSKEGCSDSLG 242 G SS YE SG GHR S SG+ SG G S+ G H S G S S G Sbjct: 1032 GWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHG-STSGQSSSCG 1090 Query: 243 HHPSQEG 263 H + G Sbjct: 1091 QHGASSG 1097 Score = 33.5 bits (75), Expect = 0.91 Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Frame = +3 Query: 78 GTSSIGASYER-----SGHGHRASTSGEESGGGFWASAVLGRDFPGAHARSKEGCSDSLG 242 G SS YE SG GHR S SG+ SG G S+ G H S G S S G Sbjct: 1972 GWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHG-SASGQSSSCG 2030 Query: 243 HHPSQEG 263 H + G Sbjct: 2031 QHGASSG 2037 Score = 33.5 bits (75), Expect = 0.91 Identities = 26/67 (38%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Frame = +3 Query: 78 GTSSIGASYER-----SGHGHRASTSGEESGGGFWASAVLGRDFPGAHARSKEGCSDSLG 242 G SS YE SG GHR S SG+ SG G S+ G H S G S S G Sbjct: 2442 GWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHG-STSGQSSSCG 2500 Query: 243 HHPSQEG 263 H + G Sbjct: 2501 QHGASSG 2507 Score = 32.0 bits (71), Expect = 2.7 Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 5/67 (7%) Frame = +3 Query: 78 GTSSIGASYER-----SGHGHRASTSGEESGGGFWASAVLGRDFPGAHARSKEGCSDSLG 242 G SS YE SG GH+ S SG+ SG G S+ G H S G S S G Sbjct: 566 GRSSSRGPYESGSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHG-STSGQSSSCG 624 Query: 243 HHPSQEG 263 H + G Sbjct: 625 QHGATSG 631 Score = 32.0 bits (71), Expect = 2.7 Identities = 23/67 (34%), Positives = 29/67 (43%) Frame = +3 Query: 69 SEFGTSSIGASYERSGHGHRASTSGEESGGGFWASAVLGRDFPGAHARSKEGCSDSLGHH 248 S +G G S++ SGHG + S SG S+ G H S CS S GH+ Sbjct: 750 SSYGQHGSG-SHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHG-SGTSCSSSCGHY 807 Query: 249 PSQEGGA 269 S G A Sbjct: 808 ESGSGQA 814
>Q9C0C2:TB182_HUMAN 182 kDa tankyrase 1-binding protein - Homo sapiens (Human)| Length = 1729 Score = 32.7 bits (73), Expect = 1.6 Identities = 23/79 (29%), Positives = 36/79 (45%) Frame = -1 Query: 241 PSESEHPSFDRA*APGKSLPKTADAQKPPPLSSPLVEARWPWPDLS*LAPIDDVPNSEKV 62 P+ SE P RA P K P+ A+ P L+ P P P+ ++P++ K+ Sbjct: 26 PTGSE-PGDTRAKPPVKPKPRALPAKPALPAKPSLLVPVGPRPPRG---PLAELPSARKM 81 Query: 61 RVPRSPDPLSSFRRPLLFS 5 + P P +RPL F+ Sbjct: 82 NMLAGPQPYGGSKRPLPFA 100
>Q58718:RAD50_METJA DNA double-strand break repair rad50 ATPase - Methanococcus| jannaschii Length = 1005 Score = 32.3 bits (72), Expect = 2.0 Identities = 18/70 (25%), Positives = 37/70 (52%), Gaps = 4/70 (5%) Frame = +1 Query: 247 IQVRKEELYNQISAWHEEYCLEE----RLGNKNVRLLKQLSEHVEPRPEDHRWRRRQRSV 414 I+ R +E+ N +S W++E C EE R + + LK ++ + ++ +RS+ Sbjct: 640 IRNRIKEIENIVSGWNKEKCREELNKLREDEREINRLKDKLNELKNKEKELIEIENRRSL 699 Query: 415 YYNRFLEYAG 444 ++++ EY G Sbjct: 700 KFDKYKEYLG 709
>P18625:FOSL2_CHICK Fos-related antigen 2 - Gallus gallus (Chicken)| Length = 323 Score = 31.6 bits (70), Expect = 3.5 Identities = 15/35 (42%), Positives = 18/35 (51%) Frame = +3 Query: 186 RDFPGAHARSKEGCSDSLGHHPSQEGGALQSDFRV 290 +D+PG+ S G S S GH GA Q FRV Sbjct: 3 QDYPGSFDTSSRGSSGSPGHPEPYSAGAAQQKFRV 37
>Q8K448:ABCA5_MOUSE ATP-binding cassette sub-family A member 5 - Mus musculus (Mouse)| Length = 1642 Score = 31.6 bits (70), Expect = 3.5 Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 13/101 (12%) Frame = +1 Query: 187 GISQELTPDQKKDALIRLAIIQVRKEELYNQI----SAWHEEYCLE-ERLGNKNVRLLKQ 351 G + ++P K+ + R+ KE L + + + C LGN V LL + Sbjct: 1399 GAVKGMSPGDMKEVISRITKALDLKEHLQKTVKKLPAGIKRKLCFALSMLGNPQVTLLDE 1458 Query: 352 LSEHVEPRPEDHRWR--------RRQRSVYYNRFLEYAGAV 450 S ++PR + H WR +++ ++ ++E A AV Sbjct: 1459 PSTGMDPRAKQHMWRAIRTAFKNKKRAALLTTHYMEEAEAV 1499
>P06921:VE2_HPV05 Regulatory protein E2 - Human papillomavirus type 5| Length = 514 Score = 30.8 bits (68), Expect = 5.9 Identities = 20/61 (32%), Positives = 26/61 (42%) Frame = +3 Query: 96 ASYERSGHGHRASTSGEESGGGFWASAVLGRDFPGAHARSKEGCSDSLGHHPSQEGGALQ 275 +S R G R S G G G P AH RS+ G + G P + GG+L+ Sbjct: 353 SSTTRGARGSRGSRGGSRGGRGRRRGRSSSSSSP-AHKRSRGGSAKLRGVSPGEVGGSLR 411 Query: 276 S 278 S Sbjct: 412 S 412
>Q12024:YTM1_YEAST Microtubule-associated protein YTM1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 460 Score = 30.8 bits (68), Expect = 6.0 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = -1 Query: 682 LSSHQQQIRQRKRNSTDDNTGNTISRCHNILRYDIICLNLIQCKT 548 L SH + Q +STD+ G ++S+ H I +D++ I +T Sbjct: 283 LESHTAPVEQVIFDSTDNTVGYSVSQDHTIKTWDLVTARCIDTRT 327
>Q9H3S7:PTN23_HUMAN Tyrosine-protein phosphatase non-receptor type 23 - Homo sapiens| (Human) Length = 1636 Score = 30.8 bits (68), Expect = 6.0 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -1 Query: 241 PSESEHPSFDRA*APGKSLPKTAD--AQKPPPLSSPLVEARWPWPDLS*LAPIDDVPNS 71 P +E P P SLP++ + PPPLSSPL EA P + P+ + P+S Sbjct: 1521 PGPAEPPGL-----PPASLPESTPIPSSSPPPLSSPLPEAPQPKEE----PPVPEAPSS 1570 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 127,463,565 Number of extensions: 2834878 Number of successful extensions: 7273 Number of sequences better than 10.0: 9 Number of HSP's gapped: 7243 Number of HSP's successfully gapped: 14 Length of query: 254 Length of database: 100,686,439 Length adjustment: 111 Effective length of query: 143 Effective length of database: 70,239,694 Effective search space: 10044276242 Effective search space used: 10044276242 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
