ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf50d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os04g0357700:Os04g0357700 46 3e-05
2AK068659:Os11g0448700 37 0.010
3AK120767:Os09g0530200 33 0.14
4AK119942:Os12g0571500 33 0.19
5AK058855:Os12g0571700 32 0.55
6AK061479:Os05g0163100 30 1.2
7AK099523:Os11g0449600 30 1.6
8AK063358:Os09g0452400 30 2.1
9AK119307:Os08g0544300 29 2.7
10AK058688:Os05g0429500 29 2.7
11Os04g0420600:Os04g0420600 28 6.1
12AK108548:Os08g0127800 28 6.1
13AK103321:Os08g0127800 28 6.1
14AK101690:Os03g0225700 28 6.1
15Os07g0525900:Os07g0525900 28 7.9
16Os05g0559300:Os05g0559300 28 7.9
17Os03g0658000:Os03g0658000 28 7.9
18AK107635:Os09g0572500 28 8.0
19AK066501:Os11g0696000 28 8.0

>Os04g0357700:Os04g0357700 |
          Length = 118
 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 27/63 (42%), Positives = 39/63 (61%)
 Frame = +2

Query: 191 AMRQLMSASLPSSMKLEDGVAPELAVNQEVHVHRRVLGEISVQGVQDGAQPACGKTGCPA 370
           A+R+L   +  SS +LED VAPEL V+ E  +HRR+L      G     +PAC ++ CPA
Sbjct: 50  AVRRLAMVAPSSSARLEDAVAPELGVDME--LHRRILAGNVGSGALRPDRPACVQS-CPA 106

Query: 371 KGQ 379
           +G+
Sbjct: 107 RGE 109



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>AK068659:Os11g0448700 |
          Length = 106

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
 Frame = +2

Query: 236 LEDGVAPELAVNQEVHVHRRVLGE---ISVQGVQDGAQPACGKTGCPAKGQPYTGHGCTT 406
           +ED VA  +   +  +  RR+L +    S  G+ +      G   CP +GQPY+G  C  
Sbjct: 43  VEDVVASVVEEEEAAYPRRRILYDSRYASYNGLTESKAACYGS--CPGRGQPYSGRSCLN 100

Query: 407 INRCR 421
           I +C+
Sbjct: 101 IYQCK 105



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>AK120767:Os09g0530200 |
          Length = 300

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 9/55 (16%)
 Frame = -2

Query: 182 RGWWQCRRRAPPPWC---------PGQRAQLTRGLREGCTPSCPC*PADRSACVG 45
           RG W C RR PPP C         PG+R    RG     T    C P+ RSA  G
Sbjct: 86  RGRWSCPRRPPPPTCTGATTSPSPPGRRRTAPRG---SSTAGATC-PSRRSATRG 136



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>AK119942:Os12g0571500 |
          Length = 143

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 320 GVQDGAQPACGKTG-CPAKGQPYTGHGCTTINRC 418
           G    A+PAC + G C A+G+PYT   CT  NRC
Sbjct: 106 GCLSRARPACPRAGGCAARGRPYT-RPCTYGNRC 138



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>AK058855:Os12g0571700 |
          Length = 124

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 14/37 (37%), Positives = 16/37 (43%)
 Frame = +2

Query: 311 SVQGVQDGAQPACGKTGCPAKGQPYTGHGCTTINRCR 421
           S  G+    Q       C A   PYTGHGC   N C+
Sbjct: 87  SFSGLTANKQVCLQGHSCAAFAMPYTGHGCIYRNNCK 123



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>AK061479:Os05g0163100 |
          Length = 266

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 182 RGWWQCRRRAPPPWCPGQRAQLTRGLR 102
           RG W+CRRR  PP C  +R+  T   R
Sbjct: 108 RGRWRCRRRRCPPSCRSRRSGSTSPAR 134



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>AK099523:Os11g0449600 |
          Length = 104

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = +2

Query: 332 GAQPACGKTGCPAKGQPYTGHGCTTINRCR 421
           G   AC    CP +G  YTG GC +  +CR
Sbjct: 74  GRGAACNPI-CPGRGDRYTGRGCKSRYQCR 102



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>AK063358:Os09g0452400 |
          Length = 441

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +2

Query: 470 PLFLPGVRTSMGALAGSIDPCSIFYFPSAFQHRCCY 577
           P F P   TS  +L  S   C+  Y P  FQ+ C Y
Sbjct: 128 PYFEPAKSTSYASLPCSSAMCNALYSPLCFQNACVY 163



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>AK119307:Os08g0544300 |
          Length = 96

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 25/81 (30%), Positives = 34/81 (41%)
 Frame = +3

Query: 384 TPAMDAQPLTDVAQAQSEWTCAMYGRQHNHFSCPASVRPWVHSRAPSIHVLFFTFLLHFS 563
           TPA  A P  D   AQ         +     S PA+     H+R P  H L    LLHF 
Sbjct: 15  TPAPGAPPGLDCHAAQLPTPSHHLSQAK---SAPATHHMPHHARRPVHHHLLL--LLHFH 69

Query: 564 TVVAIAIWYSLRSFIHIYLFF 626
            ++ +   + L  F+H +L F
Sbjct: 70  LLLLLHFLHRLLQFLHRFLHF 90



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>AK058688:Os05g0429500 |
          Length = 207

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 334 RPASLRQDGLSSEGTAVHRPWMHNH 408
           RP SL  DG + +  A+ R W+H+H
Sbjct: 180 RPQSLEDDGDAEDAFALMRGWLHDH 204



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>Os04g0420600:Os04g0420600 |
          Length = 798

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = -1

Query: 399 HPWPVYGCPFAGQPVLPQAGWAPSCTPCTLISPRTRRCTCTSWFTASSGAT 247
           HP P  G P  GQ ++     A  C    L +     CTCT+++  ++G +
Sbjct: 358 HPMPCVGLPSNGQ-IIEDVTSAGGCAQICLSN-----CTCTAYYYGNTGCS 402



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>AK108548:Os08g0127800 |
          Length = 257

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 12/29 (41%)
 Frame = +1

Query: 127 RWPGHQGGGARRRH------------CHH 177
           RWPG  GGG RRR             CHH
Sbjct: 58  RWPGGHGGGRRRREAATASTREREGWCHH 86



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>AK103321:Os08g0127800 |
          Length = 257

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 12/29 (41%)
 Frame = +1

Query: 127 RWPGHQGGGARRRH------------CHH 177
           RWPG  GGG RRR             CHH
Sbjct: 58  RWPGGHGGGRRRREAATASTREREGWCHH 86



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>AK101690:Os03g0225700 |
          Length = 704

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 7/37 (18%)
 Frame = -1

Query: 345 AGWAPSC-------TPCTLISPRTRRCTCTSWFTASS 256
           +GWAPS        T  +L S    RCT  SW TA S
Sbjct: 619 SGWAPSTDDATFMSTTSSLCSSAPSRCTDKSWGTAKS 655



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>Os07g0525900:Os07g0525900 |
          Length = 2571

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 464 LTSIHSAGPFTLCLCDIG*WLCIHGRCTAVP 372
           ++S HS  P T+C+ ++  WLC+  +   +P
Sbjct: 405 MSSGHSTWPVTMCIYNLPPWLCMKRKYIMMP 435



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>Os05g0559300:Os05g0559300 |
          Length = 345

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
 Frame = +2

Query: 290 RRVLGEISVQGVQDGAQPACGKTGCPAKGQPYTGHGCTTIN-RCRTGTK*MDLRY-VWTS 463
           +R LG   ++ ++  ++ A G    P  GQP   HG  ++N     G++  D+RY  + S
Sbjct: 32  QRGLGVAQLEKIRIQSEMAAGYLQNPPLGQPPPIHGIDSLNLMAYGGSRSGDIRYGEFQS 91

Query: 464 TQPLFL--PGVRTSMGALAGSIDPCSIFYFP 550
           T P+    P      GA A    P S    P
Sbjct: 92  TSPIIRSPPNHEAIYGAAAHYSHPSSDHTLP 122



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>Os03g0658000:Os03g0658000 |
          Length = 1364

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -2

Query: 464 LTSIHSAGPFTLCLCDIG*WLCIHGRCTAVP 372
           ++S HS  P T+C+ ++  WLC+  +   +P
Sbjct: 603 MSSGHSTWPVTICIYNLPRWLCMKRKYIMMP 633



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>AK107635:Os09g0572500 |
          Length = 541

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 15/53 (28%), Positives = 23/53 (43%)
 Frame = -1

Query: 396 PWPVYGCPFAGQPVLPQAGWAPSCTPCTLISPRTRRCTCTSWFTASSGATPSS 238
           P P    P    P +  +  + S T C    PR R   C+     +SG++P+S
Sbjct: 393 PSPSSTPPAPRAPAISSSSGSSSRTSCPCTGPRPRSSACSRPPAPTSGSSPTS 445



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>AK066501:Os11g0696000 |
          Length = 249

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +1

Query: 124 ARWPGHQGGGARR 162
           ARWP  +GGGARR
Sbjct: 177 ARWPDEEGGGARR 189


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 20,941,953
Number of extensions: 498169
Number of successful extensions: 1966
Number of sequences better than 10.0: 19
Number of HSP's gapped: 1963
Number of HSP's successfully gapped: 19
Length of query: 235
Length of database: 15,399,855
Length adjustment: 97
Effective length of query: 138
Effective length of database: 11,515,878
Effective search space: 1589191164
Effective search space used: 1589191164
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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