ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf50d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q96J92:WNK4_HUMAN Serine/threonine-protein kinase WNK4 - Homo sa... 34 0.47
2P44116:Y1162_HAEIN Uncharacterized protein HI1162 - Haemophilus ... 32 1.8
3P26841:CAT4_PSEAE Chloramphenicol acetyltransferase - Pseudomona... 32 2.3
4P12430:VGLM_BUNGE Envelope glycoprotein precursor - Bunyavirus g... 32 2.3
5Q01482:WIR1A_WHEAT WIR1A protein - Triticum aestivum (Wheat) 32 3.0
6P47759:NSG2_MOUSE Neuron-specific protein family member 2 - Mus ... 31 5.2
7Q0VCZ0:NSG2_BOVIN Neuron-specific protein family member 2 - Bos ... 31 5.2
8Q01481:WIR1B_WHEAT WIR1B protein - Triticum aestivum (Wheat) 30 6.8
9Q96N87:S6A18_HUMAN Sodium- and chloride-dependent transporter XT... 30 6.8
10Q06175:HBEGF_RAT Heparin-binding EGF-like growth factor precurso... 30 8.9
11Q06186:HBEGF_MOUSE Heparin-binding EGF-like growth factor precur... 30 8.9

>Q96J92:WNK4_HUMAN Serine/threonine-protein kinase WNK4 - Homo sapiens (Human)|
          Length = 1243
 Score = 34.3 bits (77), Expect = 0.47
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 396  PWPVYGCPFAGQPVLPQAGWAPSCTPCTLISPRTRRCTCTSWFTASSGA 250
            P P+  CP++  P      ++P+C+  TL SP    C  TS F +++ A
Sbjct: 873  PVPLSQCPWSSLPTTSPPTFSPTCSQVTLSSPFFPPCPSTSSFPSTTAA 921



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>P44116:Y1162_HAEIN Uncharacterized protein HI1162 - Haemophilus influenzae|
          Length = 157

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = -3

Query: 676 ELRRSRRNASYIVKFHQKNKYIC-IKERREYHIAIATTVLKCRRKVKNRTWIDGARECTH 500
           ELRR+  +A Y + +H +NK  C I+  R+  I     V  C RK+K    +DG +    
Sbjct: 34  ELRRNMTDAEYALWYHLRNKLFCGIRFNRQVIIG-HYIVDFCSRKLKLVIELDGIQHVEQ 92

Query: 499 GRTDAGQEKWLC*RPY 452
            + D  + K+L  + Y
Sbjct: 93  EQYDLERTKFLTAQGY 108



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>P26841:CAT4_PSEAE Chloramphenicol acetyltransferase - Pseudomonas aeruginosa|
          Length = 212

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 452 VWTSTQPLFLPGVRTSMGALAGS 520
           VW  T+ +F+PGVR   GA+ GS
Sbjct: 117 VWIGTEAMFMPGVRVGHGAIIGS 139



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>P12430:VGLM_BUNGE Envelope glycoprotein precursor - Bunyavirus germiston|
          Length = 1437

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +1

Query: 505 CTRGLHRSMF--YFLLSFCISAPLLLLLYGTLSVPLYIYICFSDEISQCKMHFFYFAVIL 678
           C R LHRS+   Y   S C +  L++++  TL++  +I++C       C +    FA I 
Sbjct: 187 CVRFLHRSVLPGYMASSICQNIELIIIIILTLAI--FIFMCIITRTYICYLMLPLFAPIA 244

Query: 679 FL 684
           +L
Sbjct: 245 YL 246



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>Q01482:WIR1A_WHEAT WIR1A protein - Triticum aestivum (Wheat)|
          Length = 88

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 16/34 (47%), Positives = 17/34 (50%)
 Frame = +2

Query: 320 GVQDGAQPACGKTGCPAKGQPYTGHGCTTINRCR 421
           G  D   PA    G    GQPYTG GC T+  CR
Sbjct: 50  GALDPNVPAVPTPG--GAGQPYTGRGCRTVYGCR 81



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>P47759:NSG2_MOUSE Neuron-specific protein family member 2 - Mus musculus (Mouse)|
          Length = 171

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
 Frame = +3

Query: 456 GRQHNHFSC-PASVRPWVHSRAPSIHVLFFTFLLHF-----STVVAIAIWYSLRSFIH 611
           G  + H  C PAS+  +  S+ PS    F+T + H+     ST  AI  W S  + IH
Sbjct: 104 GFVYKHKRCIPASLDAYYSSQDPSSRSRFYTVISHYSVAKQSTARAIGPWLSAAAVIH 161



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>Q0VCZ0:NSG2_BOVIN Neuron-specific protein family member 2 - Bos taurus (Bovine)|
          Length = 171

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
 Frame = +3

Query: 456 GRQHNHFSC-PASVRPWVHSRAPSIHVLFFTFLLHF-----STVVAIAIWYSLRSFIH 611
           G  + H  C PAS+  +  S+ PS    F+T + H+     ST  AI  W S  + IH
Sbjct: 104 GFVYKHKRCIPASLDAYYSSQDPSSRSRFYTVISHYSVAKQSTARAIGPWLSAAAVIH 161



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>Q01481:WIR1B_WHEAT WIR1B protein - Triticum aestivum (Wheat)|
          Length = 85

 Score = 30.4 bits (67), Expect = 6.8
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +2

Query: 320 GVQDGAQPACGKTGCPAKGQPYTGHGCTTINRCR 421
           G  D   PA    G    GQPYTG GC T+  C+
Sbjct: 47  GALDPNVPAVPTPG--GAGQPYTGRGCRTVYGCK 78



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>Q96N87:S6A18_HUMAN Sodium- and chloride-dependent transporter XTRP2 - Homo sapiens|
           (Human)
          Length = 628

 Score = 30.4 bits (67), Expect = 6.8
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 489 SVRPWVHSRAPSIHVLFFTFLLHFSTVVAIAIWYSLRSFIH 611
           ++ P++         L F   L+++T+VA  +WY L SF H
Sbjct: 92  AISPYLSGVGLGCVTLSFLISLYYNTIVAWVLWYLLNSFQH 132



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>Q06175:HBEGF_RAT Heparin-binding EGF-like growth factor precursor - Rattus|
           norvegicus (Rat)
          Length = 208

 Score = 30.0 bits (66), Expect = 8.9
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = -2

Query: 401 CIHGRCTAVPSLDNPSCRKLAGRHPAR 321
           CIHG C  +  L  PSC  L G H  R
Sbjct: 116 CIHGECRYLKELRIPSCHCLPGYHGQR 142



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>Q06186:HBEGF_MOUSE Heparin-binding EGF-like growth factor precursor - Mus musculus|
           (Mouse)
          Length = 208

 Score = 30.0 bits (66), Expect = 8.9
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 401 CIHGRCTAVPSLDNPSCRKLAGRHPAR 321
           CIHG C  +     PSC+ L G H  R
Sbjct: 116 CIHGECRYLQEFRTPSCKCLPGYHGHR 142


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 123,298,388
Number of extensions: 2759696
Number of successful extensions: 8841
Number of sequences better than 10.0: 11
Number of HSP's gapped: 8836
Number of HSP's successfully gapped: 11
Length of query: 235
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 125
Effective length of database: 70,513,989
Effective search space: 8814248625
Effective search space used: 8814248625
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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