| Clone Name | FLbaf50c24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Q9JL04:FMN2_MOUSE Formin-2 - Mus musculus (Mouse) | 32 | 2.0 | 2 | P34545:CBP1_CAEEL Protein cbp-1 - Caenorhabditis elegans | 31 | 4.4 | 3 | Q9NZ56:FMN2_HUMAN Formin-2 - Homo sapiens (Human) | 30 | 7.4 | 4 | Q91XA9:CHIA_MOUSE Acidic mammalian chitinase precursor - Mus mus... | 30 | 7.5 | 5 | Q12986:NFX1_HUMAN Transcriptional repressor NF-X1 - Homo sapiens... | 30 | 9.8 |
|---|
>Q9JL04:FMN2_MOUSE Formin-2 - Mus musculus (Mouse)| Length = 1567 Score = 32.0 bits (71), Expect = 2.0 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 6/54 (11%) Frame = +3 Query: 228 VHLPPKPELPNVELPPFPAVHXXXXXXXXXXXXS------AFPEVNLPPKPELP 371 V +PP P LP V +PP P + S A P V +PP P LP Sbjct: 1007 VGIPPPPPLPGVGIPPPPPLPGMGIPPPPPLPGSGIPPPPALPGVAIPPPPPLP 1060 Score = 31.6 bits (70), Expect = 2.5 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = +3 Query: 228 VHLPPKPELPNVELPPFPAVHXXXXXXXXXXXXSAFPEVNLPPKPELP 371 V +PP P LP V +PP P + P V +PP P LP Sbjct: 952 VGIPPPPPLPGVGIPPPPPL-----PGVGIPPPPPLPGVGIPPPPPLP 994 Score = 31.6 bits (70), Expect = 2.5 Identities = 17/48 (35%), Positives = 21/48 (43%) Frame = +3 Query: 228 VHLPPKPELPNVELPPFPAVHXXXXXXXXXXXXSAFPEVNLPPKPELP 371 V +PP P LP V +PP P + P V +PP P LP Sbjct: 985 VGIPPPPPLPGVGIPPPPPL-----PGVGIPPPPPLPGVGIPPPPPLP 1027 Score = 30.8 bits (68), Expect = 4.3 Identities = 16/46 (34%), Positives = 20/46 (43%) Frame = +3 Query: 234 LPPKPELPNVELPPFPAVHXXXXXXXXXXXXSAFPEVNLPPKPELP 371 +PP P LP V +PP P + P V +PP P LP Sbjct: 943 IPPPPPLPGVGIPPPPPL-----PGVGIPPPPPLPGVGIPPPPPLP 983 Score = 29.6 bits (65), Expect = 9.7 Identities = 15/46 (32%), Positives = 20/46 (43%) Frame = +3 Query: 234 LPPKPELPNVELPPFPAVHXXXXXXXXXXXXSAFPEVNLPPKPELP 371 +PP P LP + +PP P + P V +PP P LP Sbjct: 921 IPPPPPLPGMGIPPPPPL-----PGMGIPPPPPLPGVGIPPPPPLP 961
>P34545:CBP1_CAEEL Protein cbp-1 - Caenorhabditis elegans| Length = 2056 Score = 30.8 bits (68), Expect = 4.4 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 13/46 (28%) Frame = +1 Query: 193 SCPRLSCH-------HFRRCTCHLSPSCPM------LSCHHFRRCT 291 +C R+SCH H + C ++ +CP+ L C+H + CT Sbjct: 1574 NCRRMSCHKMKRVVQHTKMCKKRINGTCPVCKQLIALCCYHAKHCT 1619
>Q9NZ56:FMN2_HUMAN Formin-2 - Homo sapiens (Human)| Length = 1865 Score = 30.0 bits (66), Expect = 7.4 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +3 Query: 228 VHLPPKPELPNVELPPFPAVHXXXXXXXXXXXXSAFPEVNLPPKPELP 371 V +PP P LP +PP P + P V +PP P LP Sbjct: 1292 VGIPPPPPLPGAGIPPPPPL-----PGAGIPPPPPLPGVGIPPPPPLP 1334 Score = 29.6 bits (65), Expect = 9.7 Identities = 16/48 (33%), Positives = 20/48 (41%) Frame = +3 Query: 228 VHLPPKPELPNVELPPFPAVHXXXXXXXXXXXXSAFPEVNLPPKPELP 371 V +PP P LP V +PP P + P +PP P LP Sbjct: 1325 VGIPPPPPLPGVGIPPPPPL----------------PGAGIPPPPPLP 1356
>Q91XA9:CHIA_MOUSE Acidic mammalian chitinase precursor - Mus musculus (Mouse)| Length = 473 Score = 30.0 bits (66), Expect = 7.5 Identities = 12/24 (50%), Positives = 17/24 (70%) Frame = -1 Query: 226 AGNGGSSTLGSFGNSGWCSSPLDG 155 +G+GG S+ GS G SG+C+ DG Sbjct: 410 SGSGGGSSGGSSGGSGFCADKADG 433
>Q12986:NFX1_HUMAN Transcriptional repressor NF-X1 - Homo sapiens (Human)| Length = 1104 Score = 29.6 bits (65), Expect = 9.8 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 2/32 (6%) Frame = +1 Query: 181 PSYQSC--PRLSCHHFRRCTCHLSPSCPMLSC 270 P Q C PR C H CH S CP+ +C Sbjct: 835 PCKQPCTTPRADCGHPCMAPCHTSSPCPVTAC 866 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 105,958,474 Number of extensions: 2211775 Number of successful extensions: 5651 Number of sequences better than 10.0: 5 Number of HSP's gapped: 5621 Number of HSP's successfully gapped: 10 Length of query: 212 Length of database: 100,686,439 Length adjustment: 108 Effective length of query: 104 Effective length of database: 71,062,579 Effective search space: 7390508216 Effective search space used: 7390508216 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)